HEADER OXIDOREDUCTASE 13-AUG-20 7A1S
TITLE FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH ZN(II), 3-METHYL-2-
TITLE 2 OXOGLUTARATE, AND TANKYRASE-2 (TNKS2) FRAGMENT PEPTIDE (21-MER)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: FACTOR INHIBITING HIF-1,FIH-1,HYPOXIA-INDUCIBLE FACTOR
COMPND 5 ASPARAGINE HYDROXYLASE;
COMPND 6 EC: 1.14.11.30,1.14.11.-;
COMPND 7 ENGINEERED: YES;
COMPND 8 MOL_ID: 2;
COMPND 9 MOLECULE: TANKYRASE-2;
COMPND 10 CHAIN: B;
COMPND 11 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: HIF1AN, FIH1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 MOL_ID: 2;
SOURCE 9 SYNTHETIC: YES;
SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 11 ORGANISM_COMMON: HUMAN;
SOURCE 12 ORGANISM_TAXID: 9606
KEYWDS HYPOXIA-INDUCIBLE FACTOR ASPARAGINE HYDROXYLASE, DIOXYGENASE,
KEYWDS 2 OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.NAKASHIMA,L.BREWITZ,C.J.SCHOFIELD
REVDAT 3 31-JAN-24 7A1S 1 REMARK
REVDAT 2 22-DEC-21 7A1S 1 JRNL
REVDAT 1 25-AUG-21 7A1S 0
JRNL AUTH Y.NAKASHIMA,L.BREWITZ,A.TUMBER,E.SALAH,C.J.SCHOFIELD
JRNL TITL 2-OXOGLUTARATE DERIVATIVES CAN SELECTIVELY ENHANCE OR
JRNL TITL 2 INHIBIT THE ACTIVITY OF HUMAN OXYGENASES.
JRNL REF NAT COMMUN V. 12 6478 2021
JRNL REFN ESSN 2041-1723
JRNL PMID 34759269
JRNL DOI 10.1038/S41467-021-26673-2
REMARK 2
REMARK 2 RESOLUTION. 2.01 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.17.1_3660
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.47
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6
REMARK 3 NUMBER OF REFLECTIONS : 37966
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.182
REMARK 3 R VALUE (WORKING SET) : 0.180
REMARK 3 FREE R VALUE : 0.209
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010
REMARK 3 FREE R VALUE TEST SET COUNT : 1901
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 74.4700 - 4.8300 1.00 2807 153 0.1835 0.2067
REMARK 3 2 4.8300 - 3.8400 1.00 2672 132 0.1251 0.1672
REMARK 3 3 3.8400 - 3.3500 1.00 2626 129 0.1536 0.1798
REMARK 3 4 3.3500 - 3.0500 1.00 2586 144 0.1822 0.2055
REMARK 3 5 3.0500 - 2.8300 1.00 2605 117 0.1952 0.2168
REMARK 3 6 2.8300 - 2.6600 1.00 2582 140 0.2054 0.2462
REMARK 3 7 2.6600 - 2.5300 1.00 2543 127 0.2043 0.2324
REMARK 3 8 2.5300 - 2.4200 1.00 2569 152 0.2050 0.2277
REMARK 3 9 2.4200 - 2.3200 1.00 2540 134 0.2216 0.2221
REMARK 3 10 2.3200 - 2.2400 1.00 2564 137 0.2337 0.2279
REMARK 3 11 2.2400 - 2.1700 1.00 2516 145 0.2473 0.2855
REMARK 3 12 2.1700 - 2.1100 1.00 2557 118 0.2790 0.2793
REMARK 3 13 2.1100 - 2.0600 1.00 2517 141 0.2963 0.3451
REMARK 3 14 2.0600 - 2.0100 0.95 2381 132 0.3326 0.3345
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.572
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 45.92
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.46
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.002 3012
REMARK 3 ANGLE : 0.513 4104
REMARK 3 CHIRALITY : 0.042 412
REMARK 3 PLANARITY : 0.003 544
REMARK 3 DIHEDRAL : 16.783 1101
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 11
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 49 )
REMARK 3 ORIGIN FOR THE GROUP (A): -29.5091 10.4284 -22.7499
REMARK 3 T TENSOR
REMARK 3 T11: 0.5461 T22: 0.7443
REMARK 3 T33: 0.6952 T12: 0.0265
REMARK 3 T13: 0.0398 T23: -0.2101
REMARK 3 L TENSOR
REMARK 3 L11: 0.0790 L22: 0.9455
REMARK 3 L33: 0.2772 L12: -0.2360
REMARK 3 L13: 0.1240 L23: -0.2233
REMARK 3 S TENSOR
REMARK 3 S11: -0.1063 S12: 0.4879 S13: -0.6493
REMARK 3 S21: -0.2654 S22: -0.2036 S23: -0.1564
REMARK 3 S31: 0.4447 S32: 0.0705 S33: 0.2860
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 95 )
REMARK 3 ORIGIN FOR THE GROUP (A): -16.4018 19.0293 -14.7340
REMARK 3 T TENSOR
REMARK 3 T11: 0.3542 T22: 0.5312
REMARK 3 T33: 0.4680 T12: 0.0755
REMARK 3 T13: -0.0304 T23: -0.0988
REMARK 3 L TENSOR
REMARK 3 L11: 2.1113 L22: 1.6402
REMARK 3 L33: 1.9956 L12: 0.2119
REMARK 3 L13: -1.3608 L23: 0.1349
REMARK 3 S TENSOR
REMARK 3 S11: -0.0952 S12: -0.1207 S13: -0.1422
REMARK 3 S21: 0.1884 S22: 0.0732 S23: -0.2414
REMARK 3 S31: 0.0068 S32: 0.3054 S33: 0.0287
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 117 )
REMARK 3 ORIGIN FOR THE GROUP (A): -31.5603 20.4923 6.4778
REMARK 3 T TENSOR
REMARK 3 T11: 0.7023 T22: 0.7281
REMARK 3 T33: 0.5644 T12: 0.0399
REMARK 3 T13: 0.0090 T23: -0.0223
REMARK 3 L TENSOR
REMARK 3 L11: 2.2651 L22: 5.7010
REMARK 3 L33: 2.5633 L12: -0.7412
REMARK 3 L13: -0.4809 L23: 1.5470
REMARK 3 S TENSOR
REMARK 3 S11: -0.3243 S12: -0.4134 S13: 0.0725
REMARK 3 S21: 1.2936 S22: 0.1010 S23: 0.2232
REMARK 3 S31: 0.3381 S32: 0.0018 S33: 0.1707
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 137 )
REMARK 3 ORIGIN FOR THE GROUP (A): -15.3374 8.4143 3.7589
REMARK 3 T TENSOR
REMARK 3 T11: 0.8173 T22: 0.9235
REMARK 3 T33: 0.6083 T12: 0.2571
REMARK 3 T13: -0.0642 T23: 0.0799
REMARK 3 L TENSOR
REMARK 3 L11: 4.1825 L22: 0.5293
REMARK 3 L33: 1.5676 L12: -0.4574
REMARK 3 L13: -0.8143 L23: -0.4322
REMARK 3 S TENSOR
REMARK 3 S11: -0.3130 S12: -1.0619 S13: -0.6568
REMARK 3 S21: 0.6424 S22: 0.2785 S23: -0.0271
REMARK 3 S31: 0.7042 S32: 0.7510 S33: -0.0254
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 166 )
REMARK 3 ORIGIN FOR THE GROUP (A): -12.7906 16.4536 -5.5266
REMARK 3 T TENSOR
REMARK 3 T11: 0.3822 T22: 0.6747
REMARK 3 T33: 0.4718 T12: 0.1229
REMARK 3 T13: -0.0722 T23: -0.0349
REMARK 3 L TENSOR
REMARK 3 L11: 2.1423 L22: 0.5959
REMARK 3 L33: 2.5651 L12: -0.5680
REMARK 3 L13: -0.3917 L23: 0.3432
REMARK 3 S TENSOR
REMARK 3 S11: -0.0848 S12: -0.5300 S13: -0.2104
REMARK 3 S21: 0.2738 S22: 0.0359 S23: -0.2294
REMARK 3 S31: 0.1634 S32: 0.6518 S33: 0.0709
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 190 )
REMARK 3 ORIGIN FOR THE GROUP (A): -16.8105 29.5539 -15.9119
REMARK 3 T TENSOR
REMARK 3 T11: 0.3529 T22: 0.5390
REMARK 3 T33: 0.4704 T12: -0.0078
REMARK 3 T13: 0.0206 T23: -0.0617
REMARK 3 L TENSOR
REMARK 3 L11: 2.4585 L22: 2.2313
REMARK 3 L33: 1.6516 L12: -0.7884
REMARK 3 L13: -0.8281 L23: -0.0092
REMARK 3 S TENSOR
REMARK 3 S11: 0.2767 S12: -0.1608 S13: 0.4513
REMARK 3 S21: 0.0711 S22: -0.0386 S23: -0.2146
REMARK 3 S31: -0.2670 S32: 0.4632 S33: -0.2749
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 297 )
REMARK 3 ORIGIN FOR THE GROUP (A): -32.5928 19.9969 -10.1144
REMARK 3 T TENSOR
REMARK 3 T11: 0.3388 T22: 0.4808
REMARK 3 T33: 0.4269 T12: 0.0133
REMARK 3 T13: -0.0094 T23: -0.0667
REMARK 3 L TENSOR
REMARK 3 L11: 2.4140 L22: 0.9355
REMARK 3 L33: 1.8103 L12: -0.6448
REMARK 3 L13: -1.0040 L23: 0.3412
REMARK 3 S TENSOR
REMARK 3 S11: -0.0090 S12: 0.0409 S13: -0.2215
REMARK 3 S21: 0.1141 S22: -0.0213 S23: 0.0305
REMARK 3 S31: 0.1072 S32: -0.0006 S33: 0.0205
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 329 )
REMARK 3 ORIGIN FOR THE GROUP (A): -36.2105 40.8320 -8.4365
REMARK 3 T TENSOR
REMARK 3 T11: 0.4813 T22: 0.4695
REMARK 3 T33: 0.5224 T12: -0.0044
REMARK 3 T13: 0.0871 T23: -0.0429
REMARK 3 L TENSOR
REMARK 3 L11: 2.8499 L22: 1.9759
REMARK 3 L33: 0.9293 L12: -0.4905
REMARK 3 L13: -0.2096 L23: 0.1756
REMARK 3 S TENSOR
REMARK 3 S11: 0.1300 S12: 0.0989 S13: 0.5436
REMARK 3 S21: -0.2224 S22: -0.0071 S23: -0.2661
REMARK 3 S31: -0.5494 S32: 0.3003 S33: -0.1015
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 330 THROUGH 349 )
REMARK 3 ORIGIN FOR THE GROUP (A): -49.1707 37.5672 5.5049
REMARK 3 T TENSOR
REMARK 3 T11: 0.5016 T22: 0.4637
REMARK 3 T33: 0.3913 T12: -0.0098
REMARK 3 T13: 0.0771 T23: -0.0277
REMARK 3 L TENSOR
REMARK 3 L11: 7.0716 L22: 3.0991
REMARK 3 L33: 3.1967 L12: -1.5301
REMARK 3 L13: 1.8151 L23: -1.0818
REMARK 3 S TENSOR
REMARK 3 S11: 0.0957 S12: -0.5368 S13: -0.3313
REMARK 3 S21: 0.1617 S22: 0.0870 S23: 0.0324
REMARK 3 S31: -0.0108 S32: 0.2356 S33: -0.1810
REMARK 3 TLS GROUP : 10
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 692 THROUGH 698 )
REMARK 3 ORIGIN FOR THE GROUP (A): -35.6095 49.3038 -6.7190
REMARK 3 T TENSOR
REMARK 3 T11: 0.8337 T22: 0.7386
REMARK 3 T33: 0.9395 T12: -0.1245
REMARK 3 T13: 0.2669 T23: -0.0521
REMARK 3 L TENSOR
REMARK 3 L11: 8.0678 L22: 8.9114
REMARK 3 L33: 7.7524 L12: -0.8174
REMARK 3 L13: 1.6048 L23: 0.7176
REMARK 3 S TENSOR
REMARK 3 S11: 0.3251 S12: 0.5071 S13: 1.5492
REMARK 3 S21: -0.4606 S22: 0.1598 S23: -1.1113
REMARK 3 S31: -1.5265 S32: 0.8383 S33: -0.2637
REMARK 3 TLS GROUP : 11
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 699 THROUGH 708 )
REMARK 3 ORIGIN FOR THE GROUP (A): -27.3795 33.5816 -4.2943
REMARK 3 T TENSOR
REMARK 3 T11: 0.4578 T22: 0.6356
REMARK 3 T33: 0.4626 T12: 0.0155
REMARK 3 T13: -0.0079 T23: -0.0967
REMARK 3 L TENSOR
REMARK 3 L11: 5.3481 L22: 4.3763
REMARK 3 L33: 1.4314 L12: -1.7113
REMARK 3 L13: -0.2595 L23: 0.9133
REMARK 3 S TENSOR
REMARK 3 S11: -0.0006 S12: -0.6806 S13: 0.4845
REMARK 3 S21: 0.0522 S22: 0.1919 S23: -0.6999
REMARK 3 S31: -0.3493 S32: 0.2699 S33: -0.1386
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 7A1S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-20.
REMARK 100 THE DEPOSITION ID IS D_1292110540.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 20-JUL-19
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I03
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AUTOPROC
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38135
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.006
REMARK 200 RESOLUTION RANGE LOW (A) : 74.470
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 200 DATA REDUNDANCY : 25.80
REMARK 200 R MERGE (I) : 0.21900
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.5000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 27.80
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.500
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 1H2K
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 61.93
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULPHATE, 6% PEG 400,
REMARK 280 0.1M HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE
REMARK 280 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.20850
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.04450
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.04450
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.10425
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.04450
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.04450
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 111.31275
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.04450
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.04450
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.10425
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.04450
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.04450
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 111.31275
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 74.20850
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 3560 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 17040 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -150.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH B 824 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 ALA A 2
REMARK 465 ALA A 3
REMARK 465 THR A 4
REMARK 465 ALA A 5
REMARK 465 ALA A 6
REMARK 465 GLU A 7
REMARK 465 ALA A 8
REMARK 465 VAL A 9
REMARK 465 ALA A 10
REMARK 465 SER A 11
REMARK 465 GLY A 12
REMARK 465 SER A 13
REMARK 465 GLY A 14
REMARK 465 ASN B 691
REMARK 465 ASP B 709
REMARK 465 LYS B 710
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 ARG A 17 CG CD NE CZ NH1 NH2
REMARK 470 GLU A 29 CD OE1 OE2
REMARK 470 LYS A 115 CG CD CE NZ
REMARK 470 ARG A 117 NE CZ NH1 NH2
REMARK 470 ARG A 156 CG CD NE CZ NH1 NH2
REMARK 470 LYS A 157 CD CE NZ
REMARK 470 LYS A 304 CG CD CE NZ
REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2
REMARK 470 LEU B 692 CG CD1 CD2
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 GLN A 136 OE1
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HD21 ASN A 110 O HOH A 707 1.58
REMARK 500 O HOH A 784 O HOH A 888 1.92
REMARK 500 O HOH A 797 O HOH B 821 1.94
REMARK 500 O HOH A 751 O HOH A 881 1.95
REMARK 500 O HOH A 826 O HOH A 926 1.95
REMARK 500 O HOH A 892 O HOH A 951 1.95
REMARK 500 O HOH A 958 O HOH A 973 1.96
REMARK 500 O HOH A 896 O HOH A 942 1.98
REMARK 500 O HOH A 716 O HOH A 926 1.98
REMARK 500 O HOH B 819 O HOH B 825 1.99
REMARK 500 O HOH A 897 O HOH A 958 2.01
REMARK 500 O HOH A 841 O HOH A 912 2.02
REMARK 500 O HOH A 927 O HOH B 818 2.02
REMARK 500 O HOH A 890 O HOH A 897 2.02
REMARK 500 O HOH A 909 O HOH A 965 2.02
REMARK 500 O HOH A 900 O HOH A 945 2.02
REMARK 500 O HOH A 722 O HOH A 892 2.03
REMARK 500 O HOH A 928 O HOH A 950 2.03
REMARK 500 O HOH A 743 O HOH A 852 2.03
REMARK 500 O HOH A 776 O HOH B 809 2.03
REMARK 500 O HOH A 855 O HOH A 884 2.05
REMARK 500 O HOH A 908 O HOH B 805 2.05
REMARK 500 O HOH A 922 O HOH B 821 2.06
REMARK 500 O HOH A 946 O HOH A 966 2.07
REMARK 500 O HOH A 851 O HOH A 865 2.07
REMARK 500 O HOH A 810 O HOH A 867 2.08
REMARK 500 O HOH B 815 O HOH B 818 2.08
REMARK 500 O HOH A 793 O HOH A 901 2.08
REMARK 500 O HOH A 774 O HOH A 871 2.08
REMARK 500 O HOH A 974 O HOH A 982 2.08
REMARK 500 O HOH A 837 O HOH A 935 2.09
REMARK 500 O HOH B 815 O HOH B 819 2.09
REMARK 500 O HOH A 952 O HOH A 957 2.10
REMARK 500 O HOH A 868 O HOH A 878 2.10
REMARK 500 O HOH A 767 O HOH A 856 2.10
REMARK 500 O HOH A 843 O HOH A 979 2.10
REMARK 500 O HOH A 892 O HOH A 911 2.11
REMARK 500 O HOH A 731 O HOH A 765 2.11
REMARK 500 O HOH A 816 O HOH B 806 2.12
REMARK 500 O HOH A 941 O HOH A 975 2.13
REMARK 500 O HOH A 927 O HOH A 939 2.13
REMARK 500 O HOH A 924 O HOH A 977 2.14
REMARK 500 O HOH A 858 O HOH A 871 2.15
REMARK 500 O HOH A 916 O HOH A 925 2.15
REMARK 500 O HOH A 913 O HOH A 945 2.15
REMARK 500 O HOH A 974 O HOH A 975 2.16
REMARK 500 O HOH A 965 O HOH A 970 2.17
REMARK 500 O HOH A 888 O HOH A 951 2.18
REMARK 500 O3 SO4 A 603 O HOH A 701 2.19
REMARK 500 O HOH A 849 O HOH A 932 2.19
REMARK 500
REMARK 500 THIS ENTRY HAS 52 CLOSE CONTACTS
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 800 O HOH A 835 7465 1.92
REMARK 500 O HOH A 747 O HOH A 833 6554 1.97
REMARK 500 O HOH A 730 O HOH A 910 7465 1.99
REMARK 500 O HOH A 706 O HOH A 907 7465 2.02
REMARK 500 O HOH B 820 O HOH B 823 7465 2.04
REMARK 500 O HOH A 946 O HOH A 973 6454 2.05
REMARK 500 O HOH A 907 O HOH A 910 7465 2.07
REMARK 500 O HOH A 803 O HOH A 817 6554 2.08
REMARK 500 O HOH A 899 O HOH A 957 6554 2.15
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 66 42.17 -141.16
REMARK 500 PHE A 100 71.21 -109.86
REMARK 500 ILE A 210 -53.18 -121.78
REMARK 500 ILE A 210 -53.40 -121.78
REMARK 500 ARG A 238 -7.56 78.08
REMARK 500 TYR A 276 -11.79 80.19
REMARK 500 ASN A 332 117.76 -163.67
REMARK 500 ALA B 703 34.47 -140.99
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN A 610 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 199 NE2
REMARK 620 2 ASP A 201 OD2 106.4
REMARK 620 3 HIS A 279 NE2 94.2 90.3
REMARK 620 4 ROQ A 609 O01 88.5 160.7 100.9
REMARK 620 5 ROQ A 609 O02 152.8 90.1 107.4 71.6
REMARK 620 6 HOH A 702 O 67.2 102.5 159.7 71.7 88.5
REMARK 620 N 1 2 3 4 5
DBREF 7A1S A 1 349 UNP Q9NWT6 HIF1N_HUMAN 1 349
DBREF 7A1S B 691 710 PDB 7A1S 7A1S 691 710
SEQRES 1 A 349 MET ALA ALA THR ALA ALA GLU ALA VAL ALA SER GLY SER
SEQRES 2 A 349 GLY GLU PRO ARG GLU GLU ALA GLY ALA LEU GLY PRO ALA
SEQRES 3 A 349 TRP ASP GLU SER GLN LEU ARG SER TYR SER PHE PRO THR
SEQRES 4 A 349 ARG PRO ILE PRO ARG LEU SER GLN SER ASP PRO ARG ALA
SEQRES 5 A 349 GLU GLU LEU ILE GLU ASN GLU GLU PRO VAL VAL LEU THR
SEQRES 6 A 349 ASP THR ASN LEU VAL TYR PRO ALA LEU LYS TRP ASP LEU
SEQRES 7 A 349 GLU TYR LEU GLN GLU ASN ILE GLY ASN GLY ASP PHE SER
SEQRES 8 A 349 VAL TYR SER ALA SER THR HIS LYS PHE LEU TYR TYR ASP
SEQRES 9 A 349 GLU LYS LYS MET ALA ASN PHE GLN ASN PHE LYS PRO ARG
SEQRES 10 A 349 SER ASN ARG GLU GLU MET LYS PHE HIS GLU PHE VAL GLU
SEQRES 11 A 349 LYS LEU GLN ASP ILE GLN GLN ARG GLY GLY GLU GLU ARG
SEQRES 12 A 349 LEU TYR LEU GLN GLN THR LEU ASN ASP THR VAL GLY ARG
SEQRES 13 A 349 LYS ILE VAL MET ASP PHE LEU GLY PHE ASN TRP ASN TRP
SEQRES 14 A 349 ILE ASN LYS GLN GLN GLY LYS ARG GLY TRP GLY GLN LEU
SEQRES 15 A 349 THR SER ASN LEU LEU LEU ILE GLY MET GLU GLY ASN VAL
SEQRES 16 A 349 THR PRO ALA HIS TYR ASP GLU GLN GLN ASN PHE PHE ALA
SEQRES 17 A 349 GLN ILE LYS GLY TYR LYS ARG CYS ILE LEU PHE PRO PRO
SEQRES 18 A 349 ASP GLN PHE GLU CYS LEU TYR PRO TYR PRO VAL HIS HIS
SEQRES 19 A 349 PRO CYS ASP ARG GLN SER GLN VAL ASP PHE ASP ASN PRO
SEQRES 20 A 349 ASP TYR GLU ARG PHE PRO ASN PHE GLN ASN VAL VAL GLY
SEQRES 21 A 349 TYR GLU THR VAL VAL GLY PRO GLY ASP VAL LEU TYR ILE
SEQRES 22 A 349 PRO MET TYR TRP TRP HIS HIS ILE GLU SER LEU LEU ASN
SEQRES 23 A 349 GLY GLY ILE THR ILE THR VAL ASN PHE TRP TYR LYS GLY
SEQRES 24 A 349 ALA PRO THR PRO LYS ARG ILE GLU TYR PRO LEU LYS ALA
SEQRES 25 A 349 HIS GLN LYS VAL ALA ILE MET ARG ASN ILE GLU LYS MET
SEQRES 26 A 349 LEU GLY GLU ALA LEU GLY ASN PRO GLN GLU VAL GLY PRO
SEQRES 27 A 349 LEU LEU ASN THR MET ILE LYS GLY ARG TYR ASN
SEQRES 1 B 20 ASN LEU GLU VAL ALA GLU TYR LEU LEU GLN HIS GLY ALA
SEQRES 2 B 20 ASP VAL ASN ALA GLN ASP LYS
HET SO4 A 601 5
HET SO4 A 602 5
HET SO4 A 603 5
HET SO4 A 604 5
HET SO4 A 605 5
HET SO4 A 606 5
HET SO4 A 607 5
HET SO4 A 608 5
HET ROQ A 609 17
HET ZN A 610 1
HETNAM SO4 SULFATE ION
HETNAM ROQ (3~{S})-3-METHYL-2-OXIDANYLIDENE-PENTANEDIOIC ACID
HETNAM ZN ZINC ION
FORMUL 3 SO4 8(O4 S 2-)
FORMUL 11 ROQ C6 H8 O5
FORMUL 12 ZN ZN 2+
FORMUL 13 HOH *307(H2 O)
HELIX 1 AA1 GLU A 19 LEU A 23 5 5
HELIX 2 AA2 ASP A 28 LEU A 32 5 5
HELIX 3 AA3 ASP A 49 ASN A 58 1 10
HELIX 4 AA4 VAL A 70 TRP A 76 5 7
HELIX 5 AA5 ASP A 77 ILE A 85 1 9
HELIX 6 AA6 ASP A 104 GLN A 112 5 9
HELIX 7 AA7 LYS A 124 GLY A 139 1 16
HELIX 8 AA8 GLY A 155 GLY A 164 1 10
HELIX 9 AA9 ASN A 166 GLY A 178 1 13
HELIX 10 AB1 PRO A 220 ASP A 222 5 3
HELIX 11 AB2 GLN A 223 TYR A 228 1 6
HELIX 12 AB3 PHE A 252 VAL A 258 5 7
HELIX 13 AB4 LYS A 311 LEU A 330 1 20
HELIX 14 AB5 ASN A 332 GLN A 334 5 3
HELIX 15 AB6 GLU A 335 LYS A 345 1 11
HELIX 16 AB7 GLU B 693 GLN B 700 1 8
SHEET 1 AA1 5 THR A 39 PRO A 41 0
SHEET 2 AA1 5 GLY A 260 VAL A 265 1 O GLU A 262 N ARG A 40
SHEET 3 AA1 5 LYS A 214 PHE A 219 -1 N LEU A 218 O TYR A 261
SHEET 4 AA1 5 TRP A 278 SER A 283 -1 O HIS A 280 N ILE A 217
SHEET 5 AA1 5 VAL A 195 HIS A 199 -1 N THR A 196 O ILE A 281
SHEET 1 AA2 9 ARG A 44 LEU A 45 0
SHEET 2 AA2 9 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45
SHEET 3 AA2 9 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64
SHEET 4 AA2 9 GLN A 204 LYS A 211 -1 N PHE A 207 O LEU A 271
SHEET 5 AA2 9 THR A 290 TYR A 297 -1 O TYR A 297 N GLN A 204
SHEET 6 AA2 9 LEU A 186 GLY A 190 -1 N LEU A 188 O THR A 292
SHEET 7 AA2 9 ARG A 143 THR A 149 -1 N GLN A 148 O LEU A 187
SHEET 8 AA2 9 PHE A 90 ALA A 95 -1 N ALA A 95 O ARG A 143
SHEET 9 AA2 9 SER A 118 MET A 123 -1 O MET A 123 N PHE A 90
SHEET 1 AA3 6 ARG A 44 LEU A 45 0
SHEET 2 AA3 6 VAL A 62 LEU A 64 1 O VAL A 63 N LEU A 45
SHEET 3 AA3 6 VAL A 270 ILE A 273 -1 O VAL A 270 N LEU A 64
SHEET 4 AA3 6 GLN A 204 LYS A 211 -1 N PHE A 207 O LEU A 271
SHEET 5 AA3 6 THR A 290 TYR A 297 -1 O TYR A 297 N GLN A 204
SHEET 6 AA3 6 LEU A 182 SER A 184 -1 N THR A 183 O TRP A 296
LINK NE2 HIS A 199 ZN ZN A 610 1555 1555 2.16
LINK OD2 ASP A 201 ZN ZN A 610 1555 1555 2.02
LINK NE2 HIS A 279 ZN ZN A 610 1555 1555 2.07
LINK O01 ROQ A 609 ZN ZN A 610 1555 1555 2.16
LINK O02 ROQ A 609 ZN ZN A 610 1555 1555 2.24
LINK ZN ZN A 610 O HOH A 702 1555 1555 1.82
CISPEP 1 TYR A 308 PRO A 309 0 0.61
CRYST1 86.089 86.089 148.417 90.00 90.00 90.00 P 41 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011616 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011616 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006738 0.00000