data_7A9P # _entry.id 7A9P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7A9P pdb_00007a9p 10.2210/pdb7a9p/pdb WWPDB D_1292110977 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-05-26 2 'Structure model' 1 1 2021-12-15 3 'Structure model' 2 0 2023-07-26 4 'Structure model' 2 1 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Polymer sequence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 4 3 'Structure model' atom_type 5 3 'Structure model' entity_poly 6 4 'Structure model' chem_comp_atom 7 4 'Structure model' chem_comp_bond 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_citation_author.identifier_ORCID' 14 2 'Structure model' '_citation_author.name' 15 2 'Structure model' '_database_2.pdbx_DOI' 16 2 'Structure model' '_database_2.pdbx_database_accession' 17 3 'Structure model' '_atom_type.pdbx_N_electrons' 18 3 'Structure model' '_atom_type.pdbx_scat_Z' 19 3 'Structure model' '_entity_poly.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7A9P _pdbx_database_status.recvd_initial_deposition_date 2020-09-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Another crystla of this form.' 6ZPF unspecified PDB 'Another crystla of this form.' 6ZQ9 unspecified PDB 'Another crystla of this form.' 6ZR1 unspecified PDB 'Another crystla of this form.' 6ZRL unspecified PDB 'Another crystla of this form.' 6ZRS unspecified PDB 'Another crystla of this form.' 6ZW3 unspecified PDB 'Another crystla of this form.' 6ZWU unspecified PDB 'Another crystla of this form.' 6ZX5 unspecified PDB 'Another crystla of this form.' 6ZX8 unspecified # _audit_author.name 'Rypniewski, W.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-6097-5518 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 49 _citation.language ? _citation.page_first 12535 _citation.page_last 12539 _citation.title 'Broken symmetry between RNA enantiomers in a crystal lattice.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkab480 _citation.pdbx_database_id_PubMed 34107036 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kiliszek, A.' 1 0000-0002-2871-7535 primary 'Blaszczyk, L.' 2 0000-0002-1907-4857 primary 'Bejger, M.' 3 0000-0003-1660-9745 primary 'Rypniewski, W.' 4 0000-0002-6097-5518 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3') ; 2597.601 1 ? ? ? 'Chain K is L-enantiomer. It pairs with chain L.' 2 polymer syn ;RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3') ; 2517.553 1 ? ? ? 'Chain L is L-enantiomer. It pairs with chain K.' 3 polymer syn ;RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3') ; 2597.601 1 ? ? ? 'Chain M is D-enantiomer. it pairs with chain N.' 4 polymer syn ;RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3') ; 2517.553 1 ? ? ? 'Chain N is D-enantiomer. It pairs with chain M.' 5 non-polymer syn 'ZINC ION' 65.409 7 ? ? ? ? 6 water nat water 18.015 151 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes '(0C)(0U)(0G)(0G)(0G)(0C)(0G)(0G)' CUGGGCGG K ? 2 polyribonucleotide no yes '(0C)(0C)(0G)(0C)(0C)(0U)(0G)(0G)' CCGCCUGG L ? 3 polyribonucleotide no no CUGGGCGG CUGGGCGG M ? 4 polyribonucleotide no no CCGCCUGG CCGCCUGG N ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'ZINC ION' ZN 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 0C n 1 2 0U n 1 3 0G n 1 4 0G n 1 5 0G n 1 6 0C n 1 7 0G n 1 8 0G n 2 1 0C n 2 2 0C n 2 3 0G n 2 4 0C n 2 5 0C n 2 6 0U n 2 7 0G n 2 8 0G n 3 1 C n 3 2 U n 3 3 G n 3 4 G n 3 5 G n 3 6 C n 3 7 G n 3 8 G n 4 1 C n 4 2 C n 4 3 G n 4 4 C n 4 5 C n 4 6 U n 4 7 G n 4 8 G n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 8 'Thermus thermophilus' ? 274 ? 2 1 sample 1 8 'Thermus thermophilus' ? 274 ? 3 1 sample 1 8 'Thermus thermophilus' ? 274 ? 4 1 sample 1 8 'Thermus thermophilus' ? 274 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0C 'L-RNA linking' . "L-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 0G 'L-RNA linking' . "L-GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 0U 'L-RNA linking' . "L-URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 0C 1 79 79 0C 0C K . n A 1 2 0U 2 80 80 0U 0U K . n A 1 3 0G 3 81 81 0G 0G K . n A 1 4 0G 4 82 82 0G 0G K . n A 1 5 0G 5 83 83 0G 0G K . n A 1 6 0C 6 84 84 0C 0C K . n A 1 7 0G 7 85 85 0G 0G K . n A 1 8 0G 8 86 86 0G 0G K . n B 2 1 0C 1 90 90 0C 0C L . n B 2 2 0C 2 91 91 0C 0C L . n B 2 3 0G 3 92 92 0G 0G L . n B 2 4 0C 4 93 93 0C 0C L . n B 2 5 0C 5 94 94 0C 0C L . n B 2 6 0U 6 95 95 0U 0U L . n B 2 7 0G 7 96 96 0G 0G L . n B 2 8 0G 8 97 97 0G 0G L . n C 3 1 C 1 79 79 C C M . n C 3 2 U 2 80 80 U U M . n C 3 3 G 3 81 81 G G M . n C 3 4 G 4 82 82 G G M . n C 3 5 G 5 83 83 G G M . n C 3 6 C 6 84 84 C C M . n C 3 7 G 7 85 85 G G M . n C 3 8 G 8 86 86 G G M . n D 4 1 C 1 90 90 C C N . n D 4 2 C 2 91 91 C C N . n D 4 3 G 3 92 92 G G N . n D 4 4 C 4 93 93 C C N . n D 4 5 C 5 94 94 C C N . n D 4 6 U 6 95 95 U U N . n D 4 7 G 7 96 96 G G N . n D 4 8 G 8 97 97 G G N . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZN 1 101 1 ZN ZN K . F 5 ZN 1 102 3 ZN ZN K . G 5 ZN 1 101 7 ZN ZN L . H 5 ZN 1 102 10 ZN ZN L . I 5 ZN 1 101 2 ZN ZN M . J 5 ZN 1 102 4 ZN ZN M . K 5 ZN 1 101 8 ZN ZN N . L 6 HOH 1 201 110 HOH HOH K . L 6 HOH 2 202 1 HOH HOH K . L 6 HOH 3 203 69 HOH HOH K . L 6 HOH 4 204 49 HOH HOH K . L 6 HOH 5 205 38 HOH HOH K . L 6 HOH 6 206 58 HOH HOH K . L 6 HOH 7 207 33 HOH HOH K . L 6 HOH 8 208 43 HOH HOH K . L 6 HOH 9 209 31 HOH HOH K . L 6 HOH 10 210 20 HOH HOH K . L 6 HOH 11 211 37 HOH HOH K . L 6 HOH 12 212 128 HOH HOH K . L 6 HOH 13 213 36 HOH HOH K . L 6 HOH 14 214 41 HOH HOH K . L 6 HOH 15 215 111 HOH HOH K . L 6 HOH 16 216 113 HOH HOH K . L 6 HOH 17 217 137 HOH HOH K . L 6 HOH 18 218 9 HOH HOH K . L 6 HOH 19 219 63 HOH HOH K . L 6 HOH 20 220 60 HOH HOH K . L 6 HOH 21 221 103 HOH HOH K . L 6 HOH 22 222 24 HOH HOH K . L 6 HOH 23 223 59 HOH HOH K . L 6 HOH 24 224 129 HOH HOH K . L 6 HOH 25 225 102 HOH HOH K . L 6 HOH 26 226 66 HOH HOH K . L 6 HOH 27 227 76 HOH HOH K . L 6 HOH 28 228 143 HOH HOH K . L 6 HOH 29 229 5 HOH HOH K . L 6 HOH 30 230 82 HOH HOH K . L 6 HOH 31 231 61 HOH HOH K . M 6 HOH 1 201 84 HOH HOH L . M 6 HOH 2 202 144 HOH HOH L . M 6 HOH 3 203 94 HOH HOH L . M 6 HOH 4 204 42 HOH HOH L . M 6 HOH 5 205 15 HOH HOH L . M 6 HOH 6 206 12 HOH HOH L . M 6 HOH 7 207 19 HOH HOH L . M 6 HOH 8 208 3 HOH HOH L . M 6 HOH 9 209 68 HOH HOH L . M 6 HOH 10 210 35 HOH HOH L . M 6 HOH 11 211 25 HOH HOH L . M 6 HOH 12 212 126 HOH HOH L . M 6 HOH 13 213 122 HOH HOH L . M 6 HOH 14 214 64 HOH HOH L . M 6 HOH 15 215 148 HOH HOH L . M 6 HOH 16 216 87 HOH HOH L . M 6 HOH 17 217 27 HOH HOH L . M 6 HOH 18 218 13 HOH HOH L . M 6 HOH 19 219 7 HOH HOH L . M 6 HOH 20 220 65 HOH HOH L . M 6 HOH 21 221 17 HOH HOH L . M 6 HOH 22 222 89 HOH HOH L . M 6 HOH 23 223 118 HOH HOH L . M 6 HOH 24 224 96 HOH HOH L . M 6 HOH 25 225 71 HOH HOH L . M 6 HOH 26 226 123 HOH HOH L . M 6 HOH 27 227 77 HOH HOH L . M 6 HOH 28 228 18 HOH HOH L . M 6 HOH 29 229 45 HOH HOH L . M 6 HOH 30 230 100 HOH HOH L . M 6 HOH 31 231 73 HOH HOH L . M 6 HOH 32 232 150 HOH HOH L . M 6 HOH 33 233 114 HOH HOH L . M 6 HOH 34 234 47 HOH HOH L . M 6 HOH 35 235 48 HOH HOH L . M 6 HOH 36 236 145 HOH HOH L . N 6 HOH 1 201 62 HOH HOH M . N 6 HOH 2 202 55 HOH HOH M . N 6 HOH 3 203 98 HOH HOH M . N 6 HOH 4 204 32 HOH HOH M . N 6 HOH 5 205 138 HOH HOH M . N 6 HOH 6 206 74 HOH HOH M . N 6 HOH 7 207 14 HOH HOH M . N 6 HOH 8 208 81 HOH HOH M . N 6 HOH 9 209 16 HOH HOH M . N 6 HOH 10 210 52 HOH HOH M . N 6 HOH 11 211 104 HOH HOH M . N 6 HOH 12 212 44 HOH HOH M . N 6 HOH 13 213 40 HOH HOH M . N 6 HOH 14 214 70 HOH HOH M . N 6 HOH 15 215 11 HOH HOH M . N 6 HOH 16 216 8 HOH HOH M . N 6 HOH 17 217 29 HOH HOH M . N 6 HOH 18 218 56 HOH HOH M . N 6 HOH 19 219 95 HOH HOH M . N 6 HOH 20 220 4 HOH HOH M . N 6 HOH 21 221 2 HOH HOH M . N 6 HOH 22 222 105 HOH HOH M . N 6 HOH 23 223 23 HOH HOH M . N 6 HOH 24 224 83 HOH HOH M . N 6 HOH 25 225 30 HOH HOH M . N 6 HOH 26 226 28 HOH HOH M . N 6 HOH 27 227 125 HOH HOH M . N 6 HOH 28 228 132 HOH HOH M . N 6 HOH 29 229 93 HOH HOH M . N 6 HOH 30 230 101 HOH HOH M . N 6 HOH 31 231 124 HOH HOH M . N 6 HOH 32 232 99 HOH HOH M . N 6 HOH 33 233 115 HOH HOH M . N 6 HOH 34 234 112 HOH HOH M . N 6 HOH 35 235 67 HOH HOH M . N 6 HOH 36 236 136 HOH HOH M . N 6 HOH 37 237 142 HOH HOH M . N 6 HOH 38 238 147 HOH HOH M . O 6 HOH 1 201 92 HOH HOH N . O 6 HOH 2 202 140 HOH HOH N . O 6 HOH 3 203 117 HOH HOH N . O 6 HOH 4 204 21 HOH HOH N . O 6 HOH 5 205 121 HOH HOH N . O 6 HOH 6 206 39 HOH HOH N . O 6 HOH 7 207 119 HOH HOH N . O 6 HOH 8 208 26 HOH HOH N . O 6 HOH 9 209 51 HOH HOH N . O 6 HOH 10 210 34 HOH HOH N . O 6 HOH 11 211 53 HOH HOH N . O 6 HOH 12 212 133 HOH HOH N . O 6 HOH 13 213 149 HOH HOH N . O 6 HOH 14 214 130 HOH HOH N . O 6 HOH 15 215 6 HOH HOH N . O 6 HOH 16 216 57 HOH HOH N . O 6 HOH 17 217 10 HOH HOH N . O 6 HOH 18 218 91 HOH HOH N . O 6 HOH 19 219 79 HOH HOH N . O 6 HOH 20 220 139 HOH HOH N . O 6 HOH 21 221 22 HOH HOH N . O 6 HOH 22 222 116 HOH HOH N . O 6 HOH 23 223 88 HOH HOH N . O 6 HOH 24 224 90 HOH HOH N . O 6 HOH 25 225 80 HOH HOH N . O 6 HOH 26 226 46 HOH HOH N . O 6 HOH 27 227 97 HOH HOH N . O 6 HOH 28 228 151 HOH HOH N . O 6 HOH 29 229 78 HOH HOH N . O 6 HOH 30 230 72 HOH HOH N . O 6 HOH 31 231 131 HOH HOH N . O 6 HOH 32 232 146 HOH HOH N . O 6 HOH 33 233 54 HOH HOH N . O 6 HOH 34 234 120 HOH HOH N . O 6 HOH 35 235 127 HOH HOH N . O 6 HOH 36 236 106 HOH HOH N . O 6 HOH 37 237 134 HOH HOH N . O 6 HOH 38 238 50 HOH HOH N . O 6 HOH 39 239 107 HOH HOH N . O 6 HOH 40 240 108 HOH HOH N . O 6 HOH 41 241 86 HOH HOH N . O 6 HOH 42 242 135 HOH HOH N . O 6 HOH 43 243 85 HOH HOH N . O 6 HOH 44 244 75 HOH HOH N . O 6 HOH 45 245 141 HOH HOH N . O 6 HOH 46 246 109 HOH HOH N . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 105.600 _cell.angle_alpha_esd ? _cell.angle_beta 97.707 _cell.angle_beta_esd ? _cell.angle_gamma 90.809 _cell.angle_gamma_esd ? _cell.entry_id 7A9P _cell.details ? _cell.formula_units_Z ? _cell.length_a 21.231 _cell.length_a_esd ? _cell.length_b 26.617 _cell.length_b_esd ? _cell.length_c 38.935 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A9P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7A9P _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.00 _exptl_crystal.description needle _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M zinc acetate, 0.1 M cacodylate buffer, 18% w/v polyethylene glycol 8000.' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-02-02 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.277 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.277 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7A9P _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.985 _reflns.d_resolution_low 37.2 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5085 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 90.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.100 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.74 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.118 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.991 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.985 _reflns_shell.d_res_low 2.11 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.72 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 782 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value 0.256 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.302 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.962 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -1.123 _refine.aniso_B[1][2] 0.665 _refine.aniso_B[1][3] -0.559 _refine.aniso_B[2][2] 1.985 _refine.aniso_B[2][3] -0.060 _refine.aniso_B[3][3] -0.570 _refine.B_iso_max ? _refine.B_iso_mean 19.328 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.896 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7A9P _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.985 _refine.ls_d_res_low 37.114 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5081 _refine.ls_number_reflns_R_free 281 _refine.ls_number_reflns_R_work 4800 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 90.506 _refine.ls_percent_reflns_R_free 5.530 _refine.ls_R_factor_all 0.240 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.3263 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2352 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6ZQ9 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.371 _refine.pdbx_overall_ESU_R_Free 0.284 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 7.255 _refine.overall_SU_ML 0.201 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.985 _refine_hist.d_res_low 37.114 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 834 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 676 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.011 752 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.019 292 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.631 1.452 1168 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.143 2.383 726 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 0.062 0.200 128 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.015 0.020 412 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 124 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.221 0.200 122 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.283 0.200 393 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.254 0.200 255 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.060 0.200 148 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.273 0.200 105 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.192 0.200 2 ? r_symmetry_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.106 0.200 6 ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? 0.116 0.200 13 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.174 0.200 46 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.236 0.200 23 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 1.469 1.945 752 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.469 1.945 751 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 1.978 2.914 1168 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 1.977 2.914 1169 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.423 19.783 1083 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 3.737 19.142 1042 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.985 2.036 426 . 21 313 78.4038 . 0.300 . 0.435 . 0.292 . . . . . 0.271 . 20 . 0.731 0.586 'X-RAY DIFFRACTION' 2.036 2.092 395 . 17 344 91.3924 . 0.311 . 0.386 . 0.307 . . . . . 0.296 . 20 . 0.793 0.789 'X-RAY DIFFRACTION' 2.092 2.153 386 . 12 335 89.8964 . 0.272 . 0.749 . 0.261 . . . . . 0.244 . 20 . 0.822 0.671 'X-RAY DIFFRACTION' 2.153 2.219 380 . 14 338 92.6316 . 0.262 . 0.436 . 0.255 . . . . . 0.244 . 20 . 0.854 0.712 'X-RAY DIFFRACTION' 2.219 2.291 384 . 15 330 89.8438 . 0.246 . 0.276 . 0.245 . . . . . 0.228 . 20 . 0.885 0.833 'X-RAY DIFFRACTION' 2.291 2.371 352 . 22 301 91.7614 . 0.208 . 0.212 . 0.208 . . . . . 0.196 . 20 . 0.894 0.889 'X-RAY DIFFRACTION' 2.371 2.460 342 . 14 288 88.3041 . 0.234 . 0.347 . 0.228 . . . . . 0.210 . 20 . 0.888 0.821 'X-RAY DIFFRACTION' 2.460 2.560 323 . 20 252 84.2105 . 0.239 . 0.319 . 0.231 . . . . . 0.219 . 20 . 0.866 0.848 'X-RAY DIFFRACTION' 2.560 2.674 330 . 22 289 94.2424 . 0.257 . 0.379 . 0.250 . . . . . 0.249 . 20 . 0.861 0.721 'X-RAY DIFFRACTION' 2.674 2.803 300 . 19 263 94.0000 . 0.253 . 0.352 . 0.242 . . . . . 0.239 . 20 . 0.853 0.875 'X-RAY DIFFRACTION' 2.803 2.954 292 . 15 259 93.8356 . 0.255 . 0.339 . 0.250 . . . . . 0.251 . 20 . 0.854 0.802 'X-RAY DIFFRACTION' 2.954 3.132 274 . 17 241 94.1606 . 0.253 . 0.376 . 0.243 . . . . . 0.261 . 20 . 0.894 0.823 'X-RAY DIFFRACTION' 3.132 3.346 258 . 13 227 93.0233 . 0.197 . 0.213 . 0.195 . . . . . 0.214 . 20 . 0.918 0.969 'X-RAY DIFFRACTION' 3.346 3.612 239 . 12 189 84.1004 . 0.210 . 0.258 . 0.208 . . . . . 0.234 . 20 . 0.943 0.867 'X-RAY DIFFRACTION' 3.612 3.953 217 . 5 204 96.3134 . 0.214 . 0.236 . 0.213 . . . . . 0.248 . 20 . 0.928 0.872 'X-RAY DIFFRACTION' 3.953 4.414 205 . 16 180 95.6098 . 0.192 . 0.305 . 0.183 . . . . . 0.209 . 20 . 0.940 0.892 'X-RAY DIFFRACTION' 4.414 5.084 170 . 13 147 94.1176 . 0.227 . 0.315 . 0.219 . . . . . 0.255 . 20 . 0.922 0.876 'X-RAY DIFFRACTION' 5.084 6.198 152 . 5 134 91.4474 . 0.210 . 0.497 . 0.203 . . . . . 0.267 . 20 . 0.942 0.770 'X-RAY DIFFRACTION' 6.198 8.646 121 . 3 104 88.4298 . 0.318 . 0.688 . 0.314 . . . . . 0.372 . 20 . 0.883 0.336 'X-RAY DIFFRACTION' 8.646 37.114 67 . 6 61 100.0000 . 0.344 . 0.269 . 0.354 . . . . . 0.429 . 20 . 0.883 0.902 # _struct.entry_id 7A9P _struct.title 'Racemic compound of RNA duplexes.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7A9P _struct_keywords.text 'racemic compound, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 6 ? M N N 6 ? N N N 6 ? O N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7A9P 7A9P ? 1 ? 1 2 PDB 7A9P 7A9P ? 2 ? 1 3 PDB 7A9P 7A9P ? 3 ? 1 4 PDB 7A9P 7A9P ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7A9P K 1 ? 8 ? 7A9P 79 ? 86 ? 79 86 2 2 7A9P L 1 ? 8 ? 7A9P 90 ? 97 ? 90 97 3 3 7A9P M 1 ? 8 ? 7A9P 79 ? 86 ? 79 86 4 4 7A9P N 1 ? 8 ? 7A9P 90 ? 97 ? 90 97 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,L,M 2 1 C,D,I,J,K,N,O # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 homology 'The duplex if formed by base pairing.' 2 2 homology 'The duplex if formed by base pairing.' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A 0C 1 "O3'" ? ? ? 1_555 A 0U 2 P ? ? K 0C 79 K 0U 80 1_555 ? ? ? ? ? ? ? 1.590 ? ? covale2 covale both ? A 0U 2 "O3'" ? ? ? 1_555 A 0G 3 P ? ? K 0U 80 K 0G 81 1_555 ? ? ? ? ? ? ? 1.620 ? ? covale3 covale both ? A 0G 3 "O3'" ? ? ? 1_555 A 0G 4 P ? ? K 0G 81 K 0G 82 1_555 ? ? ? ? ? ? ? 1.575 ? ? covale4 covale both ? A 0G 4 "O3'" ? ? ? 1_555 A 0G 5 P ? ? K 0G 82 K 0G 83 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale5 covale both ? A 0G 5 "O3'" ? ? ? 1_555 A 0C 6 P ? ? K 0G 83 K 0C 84 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale6 covale both ? A 0C 6 "O3'" ? ? ? 1_555 A 0G 7 P ? ? K 0C 84 K 0G 85 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale7 covale both ? A 0G 7 "O3'" ? ? ? 1_555 A 0G 8 P ? ? K 0G 85 K 0G 86 1_555 ? ? ? ? ? ? ? 1.617 ? ? covale8 covale both ? B 0C 1 "O3'" ? ? ? 1_555 B 0C 2 P ? ? L 0C 90 L 0C 91 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale9 covale both ? B 0C 2 "O3'" ? ? ? 1_555 B 0G 3 P ? ? L 0C 91 L 0G 92 1_555 ? ? ? ? ? ? ? 1.582 ? ? covale10 covale both ? B 0G 3 "O3'" ? ? ? 1_555 B 0C 4 P ? ? L 0G 92 L 0C 93 1_555 ? ? ? ? ? ? ? 1.621 ? ? covale11 covale both ? B 0C 4 "O3'" ? ? ? 1_555 B 0C 5 P ? ? L 0C 93 L 0C 94 1_555 ? ? ? ? ? ? ? 1.581 ? ? covale12 covale both ? B 0C 5 "O3'" ? ? ? 1_555 B 0U 6 P ? ? L 0C 94 L 0U 95 1_555 ? ? ? ? ? ? ? 1.546 ? ? covale13 covale both ? B 0U 6 "O3'" ? ? ? 1_555 B 0G 7 P ? ? L 0U 95 L 0G 96 1_555 ? ? ? ? ? ? ? 1.620 ? ? covale14 covale both ? B 0G 7 "O3'" ? ? ? 1_555 B 0G 8 P ? ? L 0G 96 L 0G 97 1_555 ? ? ? ? ? ? ? 1.590 ? ? metalc1 metalc ? ? A 0G 4 N7 ? ? ? 1_555 E ZN . ZN ? ? K 0G 82 K ZN 101 1_555 ? ? ? ? ? ? ? 2.135 ? ? metalc2 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 201 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc3 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 202 1_555 ? ? ? ? ? ? ? 2.534 ? ? metalc4 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 210 1_555 ? ? ? ? ? ? ? 2.261 ? ? metalc5 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 215 1_555 ? ? ? ? ? ? ? 1.963 ? ? metalc6 metalc ? ? E ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 101 K HOH 229 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc7 metalc ? ? F ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 102 K HOH 216 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc8 metalc ? ? F ZN . ZN ? ? ? 1_555 L HOH . O ? ? K ZN 102 K HOH 217 1_555 ? ? ? ? ? ? ? 2.085 ? ? metalc9 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 213 1_555 ? ? ? ? ? ? ? 1.936 ? ? metalc10 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 223 1_555 ? ? ? ? ? ? ? 2.567 ? ? metalc11 metalc ? ? G ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 101 L HOH 231 1_555 ? ? ? ? ? ? ? 2.486 ? ? metalc12 metalc ? ? H ZN . ZN ? ? ? 1_555 M HOH . O ? ? L ZN 102 L HOH 227 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc13 metalc ? ? H ZN . ZN ? ? ? 1_555 N HOH . O ? ? L ZN 102 M HOH 213 1_544 ? ? ? ? ? ? ? 2.242 ? ? metalc14 metalc ? ? C G 4 N7 ? ? ? 1_555 I ZN . ZN ? ? M G 82 M ZN 101 1_555 ? ? ? ? ? ? ? 2.260 ? ? metalc15 metalc ? ? C G 7 N7 ? ? ? 1_555 J ZN . ZN ? ? M G 85 M ZN 102 1_555 ? ? ? ? ? ? ? 2.669 ? ? metalc16 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 211 1_555 ? ? ? ? ? ? ? 2.259 ? ? metalc17 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 218 1_555 ? ? ? ? ? ? ? 1.864 ? ? metalc18 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 220 1_555 ? ? ? ? ? ? ? 1.873 ? ? metalc19 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 223 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc20 metalc ? ? I ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 101 M HOH 236 1_555 ? ? ? ? ? ? ? 2.484 ? ? metalc21 metalc ? ? J ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 102 M HOH 203 1_555 ? ? ? ? ? ? ? 1.977 ? ? metalc22 metalc ? ? J ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 102 M HOH 205 1_555 ? ? ? ? ? ? ? 2.156 ? ? metalc23 metalc ? ? J ZN . ZN ? ? ? 1_555 N HOH . O ? ? M ZN 102 M HOH 233 1_555 ? ? ? ? ? ? ? 2.528 ? ? metalc24 metalc ? ? K ZN . ZN ? ? ? 1_555 O HOH . O ? ? N ZN 101 N HOH 207 1_555 ? ? ? ? ? ? ? 2.090 ? ? metalc25 metalc ? ? K ZN . ZN ? ? ? 1_555 O HOH . O ? ? N ZN 101 N HOH 232 1_555 ? ? ? ? ? ? ? 1.923 ? ? metalc26 metalc ? ? K ZN . ZN ? ? ? 1_555 O HOH . O ? ? N ZN 101 N HOH 239 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc27 metalc ? ? K ZN . ZN ? ? ? 1_555 O HOH . O ? ? N ZN 101 N HOH 246 1_555 ? ? ? ? ? ? ? 2.277 ? ? hydrog1 hydrog ? ? A 0C 1 N3 ? ? ? 1_555 B 0G 8 N1 ? ? K 0C 79 L 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A 0C 1 N4 ? ? ? 1_555 B 0G 8 O6 ? ? K 0C 79 L 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A 0C 1 O2 ? ? ? 1_555 B 0G 8 N2 ? ? K 0C 79 L 0G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A 0U 2 N3 ? ? ? 1_555 B 0G 7 O6 ? ? K 0U 80 L 0G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A 0U 2 O2 ? ? ? 1_555 B 0G 7 N1 ? ? K 0U 80 L 0G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A 0G 3 N1 ? ? ? 1_555 B 0U 6 O2 ? ? K 0G 81 L 0U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog7 hydrog ? ? A 0G 3 O6 ? ? ? 1_555 B 0U 6 N3 ? ? K 0G 81 L 0U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? A 0G 4 N1 ? ? ? 1_555 B 0C 5 N3 ? ? K 0G 82 L 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A 0G 4 N2 ? ? ? 1_555 B 0C 5 O2 ? ? K 0G 82 L 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A 0G 4 O6 ? ? ? 1_555 B 0C 5 N4 ? ? K 0G 82 L 0C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 0G 5 N1 ? ? ? 1_555 B 0C 4 N3 ? ? K 0G 83 L 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A 0G 5 N2 ? ? ? 1_555 B 0C 4 O2 ? ? K 0G 83 L 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A 0G 5 O6 ? ? ? 1_555 B 0C 4 N4 ? ? K 0G 83 L 0C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A 0C 6 N3 ? ? ? 1_555 B 0G 3 N1 ? ? K 0C 84 L 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A 0C 6 N4 ? ? ? 1_555 B 0G 3 O6 ? ? K 0C 84 L 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A 0C 6 O2 ? ? ? 1_555 B 0G 3 N2 ? ? K 0C 84 L 0G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A 0G 7 N1 ? ? ? 1_555 B 0C 2 N3 ? ? K 0G 85 L 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A 0G 7 N2 ? ? ? 1_555 B 0C 2 O2 ? ? K 0G 85 L 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A 0G 7 O6 ? ? ? 1_555 B 0C 2 N4 ? ? K 0G 85 L 0C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A 0G 8 N1 ? ? ? 1_555 B 0C 1 N3 ? ? K 0G 86 L 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A 0G 8 N2 ? ? ? 1_555 B 0C 1 O2 ? ? K 0G 86 L 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A 0G 8 O6 ? ? ? 1_555 B 0C 1 N4 ? ? K 0G 86 L 0C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C C 1 N3 ? ? ? 1_555 D G 8 N1 ? ? M C 79 N G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C C 1 N4 ? ? ? 1_555 D G 8 O6 ? ? M C 79 N G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C C 1 O2 ? ? ? 1_555 D G 8 N2 ? ? M C 79 N G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C U 2 N3 ? ? ? 1_555 D G 7 O6 ? ? M U 80 N G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? C U 2 O2 ? ? ? 1_555 D G 7 N1 ? ? M U 80 N G 96 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? C G 3 N1 ? ? ? 1_555 D U 6 O2 ? ? M G 81 N U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog29 hydrog ? ? C G 3 O6 ? ? ? 1_555 D U 6 N3 ? ? M G 81 N U 95 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog30 hydrog ? ? C G 4 N1 ? ? ? 1_555 D C 5 N3 ? ? M G 82 N C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C G 4 N2 ? ? ? 1_555 D C 5 O2 ? ? M G 82 N C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C G 4 O6 ? ? ? 1_555 D C 5 N4 ? ? M G 82 N C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C G 5 N1 ? ? ? 1_555 D C 4 N3 ? ? M G 83 N C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C G 5 N2 ? ? ? 1_555 D C 4 O2 ? ? M G 83 N C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C G 5 O6 ? ? ? 1_555 D C 4 N4 ? ? M G 83 N C 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C C 6 N3 ? ? ? 1_555 D G 3 N1 ? ? M C 84 N G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C C 6 N4 ? ? ? 1_555 D G 3 O6 ? ? M C 84 N G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C C 6 O2 ? ? ? 1_555 D G 3 N2 ? ? M C 84 N G 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C G 7 N1 ? ? ? 1_555 D C 2 N3 ? ? M G 85 N C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C G 7 N2 ? ? ? 1_555 D C 2 O2 ? ? M G 85 N C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C G 7 O6 ? ? ? 1_555 D C 2 N4 ? ? M G 85 N C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C G 8 N1 ? ? ? 1_555 D C 1 N3 ? ? M G 86 N C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C G 8 N2 ? ? ? 1_555 D C 1 O2 ? ? M G 86 N C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C G 8 O6 ? ? ? 1_555 D C 1 N4 ? ? M G 86 N C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A 0G 4 ? K 0G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 201 ? 1_555 85.8 ? 2 N7 ? A 0G 4 ? K 0G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 202 ? 1_555 84.4 ? 3 O ? L HOH . ? K HOH 201 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 202 ? 1_555 91.5 ? 4 N7 ? A 0G 4 ? K 0G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 210 ? 1_555 103.1 ? 5 O ? L HOH . ? K HOH 201 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 210 ? 1_555 102.0 ? 6 O ? L HOH . ? K HOH 202 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 210 ? 1_555 164.9 ? 7 N7 ? A 0G 4 ? K 0G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 215 ? 1_555 93.5 ? 8 O ? L HOH . ? K HOH 201 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 215 ? 1_555 170.7 ? 9 O ? L HOH . ? K HOH 202 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 215 ? 1_555 79.3 ? 10 O ? L HOH . ? K HOH 210 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 215 ? 1_555 87.2 ? 11 N7 ? A 0G 4 ? K 0G 82 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 229 ? 1_555 173.5 ? 12 O ? L HOH . ? K HOH 201 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 229 ? 1_555 95.7 ? 13 O ? L HOH . ? K HOH 202 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 229 ? 1_555 89.2 ? 14 O ? L HOH . ? K HOH 210 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 229 ? 1_555 82.8 ? 15 O ? L HOH . ? K HOH 215 ? 1_555 ZN ? E ZN . ? K ZN 101 ? 1_555 O ? L HOH . ? K HOH 229 ? 1_555 84.0 ? 16 O ? L HOH . ? K HOH 216 ? 1_555 ZN ? F ZN . ? K ZN 102 ? 1_555 O ? L HOH . ? K HOH 217 ? 1_555 85.2 ? 17 O ? M HOH . ? L HOH 213 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 223 ? 1_555 55.8 ? 18 O ? M HOH . ? L HOH 213 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 231 ? 1_555 62.1 ? 19 O ? M HOH . ? L HOH 223 ? 1_555 ZN ? G ZN . ? L ZN 101 ? 1_555 O ? M HOH . ? L HOH 231 ? 1_555 111.3 ? 20 O ? M HOH . ? L HOH 227 ? 1_555 ZN ? H ZN . ? L ZN 102 ? 1_555 O ? N HOH . ? M HOH 213 ? 1_544 101.0 ? 21 N7 ? C G 4 ? M G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 211 ? 1_555 91.8 ? 22 N7 ? C G 4 ? M G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 218 ? 1_555 97.5 ? 23 O ? N HOH . ? M HOH 211 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 218 ? 1_555 165.8 ? 24 N7 ? C G 4 ? M G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 220 ? 1_555 93.8 ? 25 O ? N HOH . ? M HOH 211 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 220 ? 1_555 96.4 ? 26 O ? N HOH . ? M HOH 218 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 220 ? 1_555 93.6 ? 27 N7 ? C G 4 ? M G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 223 ? 1_555 102.4 ? 28 O ? N HOH . ? M HOH 211 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 223 ? 1_555 92.1 ? 29 O ? N HOH . ? M HOH 218 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 223 ? 1_555 75.6 ? 30 O ? N HOH . ? M HOH 220 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 223 ? 1_555 161.4 ? 31 N7 ? C G 4 ? M G 82 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 236 ? 1_555 158.9 ? 32 O ? N HOH . ? M HOH 211 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 236 ? 1_555 67.3 ? 33 O ? N HOH . ? M HOH 218 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 236 ? 1_555 102.6 ? 34 O ? N HOH . ? M HOH 220 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 236 ? 1_555 91.2 ? 35 O ? N HOH . ? M HOH 223 ? 1_555 ZN ? I ZN . ? M ZN 101 ? 1_555 O ? N HOH . ? M HOH 236 ? 1_555 76.8 ? 36 N7 ? C G 7 ? M G 85 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 203 ? 1_555 82.8 ? 37 N7 ? C G 7 ? M G 85 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 205 ? 1_555 76.7 ? 38 O ? N HOH . ? M HOH 203 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 205 ? 1_555 131.0 ? 39 N7 ? C G 7 ? M G 85 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 233 ? 1_555 151.0 ? 40 O ? N HOH . ? M HOH 203 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 233 ? 1_555 76.0 ? 41 O ? N HOH . ? M HOH 205 ? 1_555 ZN ? J ZN . ? M ZN 102 ? 1_555 O ? N HOH . ? M HOH 233 ? 1_555 102.6 ? 42 O ? O HOH . ? N HOH 207 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 232 ? 1_555 138.4 ? 43 O ? O HOH . ? N HOH 207 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 239 ? 1_555 100.7 ? 44 O ? O HOH . ? N HOH 232 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 239 ? 1_555 86.5 ? 45 O ? O HOH . ? N HOH 207 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 246 ? 1_555 136.9 ? 46 O ? O HOH . ? N HOH 232 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 246 ? 1_555 82.9 ? 47 O ? O HOH . ? N HOH 239 ? 1_555 ZN ? K ZN . ? N ZN 101 ? 1_555 O ? O HOH . ? N HOH 246 ? 1_555 92.0 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C5 L 0C 93 ? ? O L HOH 215 ? ? 2.01 2 1 C5 N C 93 ? ? O N HOH 213 ? ? 2.01 3 1 O N HOH 203 ? ? O N HOH 213 ? ? 2.08 4 1 OP1 N G 96 ? ? O N HOH 201 ? ? 2.09 5 1 O L HOH 215 ? ? O L HOH 235 ? ? 2.12 6 1 O N HOH 212 ? ? O N HOH 220 ? ? 2.17 7 1 O N HOH 213 ? ? O N HOH 215 ? ? 2.18 8 1 O L HOH 213 ? ? O L HOH 223 ? ? 2.18 # _pdbx_entry_details.entry_id 7A9P _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0C OP3 O N N 1 0C P P N N 2 0C OP1 O N N 3 0C OP2 O N N 4 0C "O5'" O N N 5 0C "C5'" C N N 6 0C "C4'" C N S 7 0C "O4'" O N N 8 0C "C3'" C N R 9 0C "O3'" O N N 10 0C "C2'" C N S 11 0C "O2'" O N N 12 0C "C1'" C N S 13 0C N1 N N N 14 0C C2 C N N 15 0C O2 O N N 16 0C N3 N N N 17 0C C4 C N N 18 0C N4 N N N 19 0C C5 C N N 20 0C C6 C N N 21 0C HOP3 H N N 22 0C HOP2 H N N 23 0C "H5'" H N N 24 0C "H5''" H N N 25 0C "H4'" H N N 26 0C "H3'" H N N 27 0C "HO3'" H N N 28 0C "H2'" H N N 29 0C "HO2'" H N N 30 0C "H1'" H N N 31 0C H41 H N N 32 0C H42 H N N 33 0C H5 H N N 34 0C H6 H N N 35 0G OP3 O N N 36 0G P P N N 37 0G OP1 O N N 38 0G OP2 O N N 39 0G "O5'" O N N 40 0G "C5'" C N N 41 0G "C4'" C N S 42 0G "O4'" O N N 43 0G "C3'" C N R 44 0G "O3'" O N N 45 0G "C2'" C N S 46 0G "O2'" O N N 47 0G "C1'" C N S 48 0G N9 N Y N 49 0G C8 C Y N 50 0G N7 N Y N 51 0G C6 C N N 52 0G O6 O N N 53 0G C5 C Y N 54 0G N1 N N N 55 0G C2 C N N 56 0G N2 N N N 57 0G N3 N N N 58 0G C4 C Y N 59 0G HOP3 H N N 60 0G HOP2 H N N 61 0G "H5'" H N N 62 0G "H5''" H N N 63 0G "H4'" H N N 64 0G "H3'" H N N 65 0G "HO3'" H N N 66 0G "H2'" H N N 67 0G "HO2'" H N N 68 0G "H1'" H N N 69 0G H8 H N N 70 0G H1 H N N 71 0G H21 H N N 72 0G H22 H N N 73 0U OP3 O N N 74 0U P P N N 75 0U OP1 O N N 76 0U OP2 O N N 77 0U "O5'" O N N 78 0U "C5'" C N N 79 0U "C4'" C N S 80 0U "O4'" O N N 81 0U "C3'" C N R 82 0U "O3'" O N N 83 0U "C2'" C N S 84 0U "O2'" O N N 85 0U "C1'" C N S 86 0U N1 N N N 87 0U C2 C N N 88 0U O2 O N N 89 0U N3 N N N 90 0U C4 C N N 91 0U O4 O N N 92 0U C5 C N N 93 0U C6 C N N 94 0U HOP3 H N N 95 0U HOP2 H N N 96 0U "H5'" H N N 97 0U "H5''" H N N 98 0U "H4'" H N N 99 0U "H3'" H N N 100 0U "HO3'" H N N 101 0U "H2'" H N N 102 0U "HO2'" H N N 103 0U "H1'" H N N 104 0U H3 H N N 105 0U H5 H N N 106 0U H6 H N N 107 C OP3 O N N 108 C P P N N 109 C OP1 O N N 110 C OP2 O N N 111 C "O5'" O N N 112 C "C5'" C N N 113 C "C4'" C N R 114 C "O4'" O N N 115 C "C3'" C N S 116 C "O3'" O N N 117 C "C2'" C N R 118 C "O2'" O N N 119 C "C1'" C N R 120 C N1 N N N 121 C C2 C N N 122 C O2 O N N 123 C N3 N N N 124 C C4 C N N 125 C N4 N N N 126 C C5 C N N 127 C C6 C N N 128 C HOP3 H N N 129 C HOP2 H N N 130 C "H5'" H N N 131 C "H5''" H N N 132 C "H4'" H N N 133 C "H3'" H N N 134 C "HO3'" H N N 135 C "H2'" H N N 136 C "HO2'" H N N 137 C "H1'" H N N 138 C H41 H N N 139 C H42 H N N 140 C H5 H N N 141 C H6 H N N 142 G OP3 O N N 143 G P P N N 144 G OP1 O N N 145 G OP2 O N N 146 G "O5'" O N N 147 G "C5'" C N N 148 G "C4'" C N R 149 G "O4'" O N N 150 G "C3'" C N S 151 G "O3'" O N N 152 G "C2'" C N R 153 G "O2'" O N N 154 G "C1'" C N R 155 G N9 N Y N 156 G C8 C Y N 157 G N7 N Y N 158 G C5 C Y N 159 G C6 C N N 160 G O6 O N N 161 G N1 N N N 162 G C2 C N N 163 G N2 N N N 164 G N3 N N N 165 G C4 C Y N 166 G HOP3 H N N 167 G HOP2 H N N 168 G "H5'" H N N 169 G "H5''" H N N 170 G "H4'" H N N 171 G "H3'" H N N 172 G "HO3'" H N N 173 G "H2'" H N N 174 G "HO2'" H N N 175 G "H1'" H N N 176 G H8 H N N 177 G H1 H N N 178 G H21 H N N 179 G H22 H N N 180 HOH O O N N 181 HOH H1 H N N 182 HOH H2 H N N 183 U OP3 O N N 184 U P P N N 185 U OP1 O N N 186 U OP2 O N N 187 U "O5'" O N N 188 U "C5'" C N N 189 U "C4'" C N R 190 U "O4'" O N N 191 U "C3'" C N S 192 U "O3'" O N N 193 U "C2'" C N R 194 U "O2'" O N N 195 U "C1'" C N R 196 U N1 N N N 197 U C2 C N N 198 U O2 O N N 199 U N3 N N N 200 U C4 C N N 201 U O4 O N N 202 U C5 C N N 203 U C6 C N N 204 U HOP3 H N N 205 U HOP2 H N N 206 U "H5'" H N N 207 U "H5''" H N N 208 U "H4'" H N N 209 U "H3'" H N N 210 U "HO3'" H N N 211 U "H2'" H N N 212 U "HO2'" H N N 213 U "H1'" H N N 214 U H3 H N N 215 U H5 H N N 216 U H6 H N N 217 ZN ZN ZN N N 218 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0C OP3 P sing N N 1 0C OP3 HOP3 sing N N 2 0C P OP1 doub N N 3 0C P OP2 sing N N 4 0C P "O5'" sing N N 5 0C OP2 HOP2 sing N N 6 0C "O5'" "C5'" sing N N 7 0C "C5'" "C4'" sing N N 8 0C "C5'" "H5'" sing N N 9 0C "C5'" "H5''" sing N N 10 0C "C4'" "O4'" sing N N 11 0C "C4'" "C3'" sing N N 12 0C "C4'" "H4'" sing N N 13 0C "O4'" "C1'" sing N N 14 0C "C3'" "O3'" sing N N 15 0C "C3'" "C2'" sing N N 16 0C "C3'" "H3'" sing N N 17 0C "O3'" "HO3'" sing N N 18 0C "C2'" "O2'" sing N N 19 0C "C2'" "C1'" sing N N 20 0C "C2'" "H2'" sing N N 21 0C "O2'" "HO2'" sing N N 22 0C "C1'" N1 sing N N 23 0C "C1'" "H1'" sing N N 24 0C N1 C2 sing N N 25 0C N1 C6 sing N N 26 0C C2 O2 doub N N 27 0C C2 N3 sing N N 28 0C N3 C4 doub N N 29 0C C4 N4 sing N N 30 0C C4 C5 sing N N 31 0C N4 H41 sing N N 32 0C N4 H42 sing N N 33 0C C5 C6 doub N N 34 0C C5 H5 sing N N 35 0C C6 H6 sing N N 36 0G OP3 P sing N N 37 0G OP3 HOP3 sing N N 38 0G P OP1 doub N N 39 0G P OP2 sing N N 40 0G P "O5'" sing N N 41 0G OP2 HOP2 sing N N 42 0G "O5'" "C5'" sing N N 43 0G "C5'" "C4'" sing N N 44 0G "C5'" "H5'" sing N N 45 0G "C5'" "H5''" sing N N 46 0G "C4'" "O4'" sing N N 47 0G "C4'" "C3'" sing N N 48 0G "C4'" "H4'" sing N N 49 0G "O4'" "C1'" sing N N 50 0G "C3'" "O3'" sing N N 51 0G "C3'" "C2'" sing N N 52 0G "C3'" "H3'" sing N N 53 0G "O3'" "HO3'" sing N N 54 0G "C2'" "O2'" sing N N 55 0G "C2'" "C1'" sing N N 56 0G "C2'" "H2'" sing N N 57 0G "O2'" "HO2'" sing N N 58 0G "C1'" N9 sing N N 59 0G "C1'" "H1'" sing N N 60 0G N9 C8 sing Y N 61 0G N9 C4 sing Y N 62 0G C8 N7 doub Y N 63 0G C8 H8 sing N N 64 0G N7 C5 sing Y N 65 0G C6 O6 doub N N 66 0G C6 C5 sing N N 67 0G C6 N1 sing N N 68 0G C5 C4 doub Y N 69 0G N1 C2 sing N N 70 0G N1 H1 sing N N 71 0G C2 N2 sing N N 72 0G C2 N3 doub N N 73 0G N2 H21 sing N N 74 0G N2 H22 sing N N 75 0G N3 C4 sing N N 76 0U OP3 P sing N N 77 0U OP3 HOP3 sing N N 78 0U P OP1 doub N N 79 0U P OP2 sing N N 80 0U P "O5'" sing N N 81 0U OP2 HOP2 sing N N 82 0U "O5'" "C5'" sing N N 83 0U "C5'" "C4'" sing N N 84 0U "C5'" "H5'" sing N N 85 0U "C5'" "H5''" sing N N 86 0U "C4'" "O4'" sing N N 87 0U "C4'" "C3'" sing N N 88 0U "C4'" "H4'" sing N N 89 0U "O4'" "C1'" sing N N 90 0U "C3'" "O3'" sing N N 91 0U "C3'" "C2'" sing N N 92 0U "C3'" "H3'" sing N N 93 0U "O3'" "HO3'" sing N N 94 0U "C2'" "O2'" sing N N 95 0U "C2'" "C1'" sing N N 96 0U "C2'" "H2'" sing N N 97 0U "O2'" "HO2'" sing N N 98 0U "C1'" N1 sing N N 99 0U "C1'" "H1'" sing N N 100 0U N1 C2 sing N N 101 0U N1 C6 sing N N 102 0U C2 O2 doub N N 103 0U C2 N3 sing N N 104 0U N3 C4 sing N N 105 0U N3 H3 sing N N 106 0U C4 O4 doub N N 107 0U C4 C5 sing N N 108 0U C5 C6 doub N N 109 0U C5 H5 sing N N 110 0U C6 H6 sing N N 111 C OP3 P sing N N 112 C OP3 HOP3 sing N N 113 C P OP1 doub N N 114 C P OP2 sing N N 115 C P "O5'" sing N N 116 C OP2 HOP2 sing N N 117 C "O5'" "C5'" sing N N 118 C "C5'" "C4'" sing N N 119 C "C5'" "H5'" sing N N 120 C "C5'" "H5''" sing N N 121 C "C4'" "O4'" sing N N 122 C "C4'" "C3'" sing N N 123 C "C4'" "H4'" sing N N 124 C "O4'" "C1'" sing N N 125 C "C3'" "O3'" sing N N 126 C "C3'" "C2'" sing N N 127 C "C3'" "H3'" sing N N 128 C "O3'" "HO3'" sing N N 129 C "C2'" "O2'" sing N N 130 C "C2'" "C1'" sing N N 131 C "C2'" "H2'" sing N N 132 C "O2'" "HO2'" sing N N 133 C "C1'" N1 sing N N 134 C "C1'" "H1'" sing N N 135 C N1 C2 sing N N 136 C N1 C6 sing N N 137 C C2 O2 doub N N 138 C C2 N3 sing N N 139 C N3 C4 doub N N 140 C C4 N4 sing N N 141 C C4 C5 sing N N 142 C N4 H41 sing N N 143 C N4 H42 sing N N 144 C C5 C6 doub N N 145 C C5 H5 sing N N 146 C C6 H6 sing N N 147 G OP3 P sing N N 148 G OP3 HOP3 sing N N 149 G P OP1 doub N N 150 G P OP2 sing N N 151 G P "O5'" sing N N 152 G OP2 HOP2 sing N N 153 G "O5'" "C5'" sing N N 154 G "C5'" "C4'" sing N N 155 G "C5'" "H5'" sing N N 156 G "C5'" "H5''" sing N N 157 G "C4'" "O4'" sing N N 158 G "C4'" "C3'" sing N N 159 G "C4'" "H4'" sing N N 160 G "O4'" "C1'" sing N N 161 G "C3'" "O3'" sing N N 162 G "C3'" "C2'" sing N N 163 G "C3'" "H3'" sing N N 164 G "O3'" "HO3'" sing N N 165 G "C2'" "O2'" sing N N 166 G "C2'" "C1'" sing N N 167 G "C2'" "H2'" sing N N 168 G "O2'" "HO2'" sing N N 169 G "C1'" N9 sing N N 170 G "C1'" "H1'" sing N N 171 G N9 C8 sing Y N 172 G N9 C4 sing Y N 173 G C8 N7 doub Y N 174 G C8 H8 sing N N 175 G N7 C5 sing Y N 176 G C5 C6 sing N N 177 G C5 C4 doub Y N 178 G C6 O6 doub N N 179 G C6 N1 sing N N 180 G N1 C2 sing N N 181 G N1 H1 sing N N 182 G C2 N2 sing N N 183 G C2 N3 doub N N 184 G N2 H21 sing N N 185 G N2 H22 sing N N 186 G N3 C4 sing N N 187 HOH O H1 sing N N 188 HOH O H2 sing N N 189 U OP3 P sing N N 190 U OP3 HOP3 sing N N 191 U P OP1 doub N N 192 U P OP2 sing N N 193 U P "O5'" sing N N 194 U OP2 HOP2 sing N N 195 U "O5'" "C5'" sing N N 196 U "C5'" "C4'" sing N N 197 U "C5'" "H5'" sing N N 198 U "C5'" "H5''" sing N N 199 U "C4'" "O4'" sing N N 200 U "C4'" "C3'" sing N N 201 U "C4'" "H4'" sing N N 202 U "O4'" "C1'" sing N N 203 U "C3'" "O3'" sing N N 204 U "C3'" "C2'" sing N N 205 U "C3'" "H3'" sing N N 206 U "O3'" "HO3'" sing N N 207 U "C2'" "O2'" sing N N 208 U "C2'" "C1'" sing N N 209 U "C2'" "H2'" sing N N 210 U "O2'" "HO2'" sing N N 211 U "C1'" N1 sing N N 212 U "C1'" "H1'" sing N N 213 U N1 C2 sing N N 214 U N1 C6 sing N N 215 U C2 O2 doub N N 216 U C2 N3 sing N N 217 U N3 C4 sing N N 218 U N3 H3 sing N N 219 U C4 O4 doub N N 220 U C4 C5 sing N N 221 U C5 C6 doub N N 222 U C5 H5 sing N N 223 U C6 H6 sing N N 224 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7A9P 'double helix' 7A9P 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A 0C 1 1_555 B 0G 8 1_555 0.003 -0.118 -0.152 -4.603 3.748 -1.950 1 K_0C79:0G97_L K 79 ? L 97 ? 19 1 1 A 0U 2 1_555 B 0G 7 1_555 2.431 -0.809 0.467 -12.414 23.704 -2.580 2 K_0U80:0G96_L K 80 ? L 96 ? 28 1 1 A 0G 3 1_555 B 0U 6 1_555 -1.755 -0.635 -0.375 1.027 6.425 -6.632 3 K_0G81:0U95_L K 81 ? L 95 ? 28 1 1 A 0G 4 1_555 B 0C 5 1_555 0.089 -0.165 -0.667 -5.085 16.068 -2.476 4 K_0G82:0C94_L K 82 ? L 94 ? 19 1 1 A 0G 5 1_555 B 0C 4 1_555 0.119 -0.307 -0.501 3.226 15.102 -3.773 5 K_0G83:0C93_L K 83 ? L 93 ? 19 1 1 A 0C 6 1_555 B 0G 3 1_555 0.784 -0.199 -0.254 1.282 10.470 5.552 6 K_0C84:0G92_L K 84 ? L 92 ? 19 1 1 A 0G 7 1_555 B 0C 2 1_555 -0.953 -0.352 0.104 8.316 22.780 -1.029 7 K_0G85:0C91_L K 85 ? L 91 ? 19 1 1 A 0G 8 1_555 B 0C 1 1_555 -0.342 -0.145 -0.218 8.465 10.839 -3.344 8 K_0G86:0C90_L K 86 ? L 90 ? 19 1 1 C C 1 1_555 D G 8 1_555 0.156 -0.218 0.039 4.138 -7.347 -2.523 9 M_C79:G97_N M 79 ? N 97 ? 19 1 1 C U 2 1_555 D G 7 1_555 2.436 -0.763 -0.324 12.694 -19.277 -0.002 10 M_U80:G96_N M 80 ? N 96 ? 28 1 1 C G 3 1_555 D U 6 1_555 -1.719 -0.497 -0.019 -5.829 -10.668 -1.134 11 M_G81:U95_N M 81 ? N 95 ? 28 1 1 C G 4 1_555 D C 5 1_555 -0.001 -0.268 0.289 -0.144 -16.483 -3.137 12 M_G82:C94_N M 82 ? N 94 ? 19 1 1 C G 5 1_555 D C 4 1_555 -0.053 -0.196 0.050 -6.010 -17.159 -2.064 13 M_G83:C93_N M 83 ? N 93 ? 19 1 1 C C 6 1_555 D G 3 1_555 0.995 -0.263 0.039 4.202 -12.325 4.719 14 M_C84:G92_N M 84 ? N 92 ? 19 1 1 C G 7 1_555 D C 2 1_555 -0.491 -0.176 0.065 -8.955 -18.934 -0.967 15 M_G85:C91_N M 85 ? N 91 ? 19 1 1 C G 8 1_555 D C 1 1_555 -0.347 -0.115 0.200 -7.334 -11.596 -1.587 16 M_G86:C90_N M 86 ? N 90 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A 0C 1 1_555 B 0G 8 1_555 A 0U 2 1_555 B 0G 7 1_555 0.014 -1.045 -3.099 -6.357 -6.871 40.846 -2.127 0.594 -2.865 -9.692 8.967 41.860 1 KK_0C790U80:0G960G97_LL K 79 ? L 97 ? K 80 ? L 96 ? 1 A 0U 2 1_555 B 0G 7 1_555 A 0G 3 1_555 B 0U 6 1_555 -0.725 -2.412 -3.356 9.024 -15.575 20.065 -8.518 -0.370 -1.372 -36.580 -21.195 26.894 2 KK_0U800G81:0U950G96_LL K 80 ? L 96 ? K 81 ? L 95 ? 1 A 0G 3 1_555 B 0U 6 1_555 A 0G 4 1_555 B 0C 5 1_555 0.006 -1.263 -3.164 0.521 -0.706 37.227 -2.068 -0.077 -3.140 -1.106 -0.816 37.237 3 KK_0G810G82:0C940U95_LL K 81 ? L 95 ? K 82 ? L 94 ? 1 A 0G 4 1_555 B 0C 5 1_555 A 0G 5 1_555 B 0C 4 1_555 -0.065 -1.586 -3.276 -0.896 -5.434 36.430 -3.223 0.221 -3.014 -8.631 1.422 36.830 4 KK_0G820G83:0C930C94_LL K 82 ? L 94 ? K 83 ? L 93 ? 1 A 0G 5 1_555 B 0C 4 1_555 A 0C 6 1_555 B 0G 3 1_555 0.889 -1.223 -3.304 -3.573 -0.757 34.026 -2.200 -0.936 -3.350 -1.289 6.085 34.215 5 KK_0G830C84:0G920C93_LL K 83 ? L 93 ? K 84 ? L 92 ? 1 A 0C 6 1_555 B 0G 3 1_555 A 0G 7 1_555 B 0C 2 1_555 -0.072 -1.662 -3.238 -5.671 -13.636 27.022 -5.476 1.108 -2.118 -26.793 11.142 30.729 6 KK_0C840G85:0C910G92_LL K 84 ? L 92 ? K 85 ? L 91 ? 1 A 0G 7 1_555 B 0C 2 1_555 A 0G 8 1_555 B 0C 1 1_555 0.124 -1.215 -3.256 2.051 -7.767 34.453 -3.096 -0.494 -2.910 -12.896 -3.405 35.350 7 KK_0G850G86:0C900C91_LL K 85 ? L 91 ? K 86 ? L 90 ? 1 A 0G 8 1_555 B 0C 1 1_555 C C 1 1_555 D G 8 1_555 3.056 -0.518 0.804 1.540 178.955 -152.695 0.157 1.529 0.897 -89.492 0.770 -179.755 8 KM_0G86C79:G970C90_NL K 86 ? L 90 ? M 79 ? N 97 ? 1 C C 1 1_555 D G 8 1_555 C U 2 1_555 D G 7 1_555 0.072 -1.171 3.113 2.105 5.704 38.196 -2.419 0.131 2.914 8.649 -3.193 38.659 9 MM_C79U80:G96G97_NN M 79 ? N 97 ? M 80 ? N 96 ? 1 C U 2 1_555 D G 7 1_555 C G 3 1_555 D U 6 1_555 -0.546 -2.028 3.492 -2.520 15.266 20.741 -8.285 0.604 1.681 36.547 6.033 25.825 10 MM_U80G81:U95G96_NN M 80 ? N 96 ? M 81 ? N 95 ? 1 C G 3 1_555 D U 6 1_555 C G 4 1_555 D C 5 1_555 -0.201 -1.101 3.212 -2.874 4.521 36.911 -2.300 -0.053 3.067 7.094 4.510 37.285 11 MM_G81G82:C94U95_NN M 81 ? N 95 ? M 82 ? N 94 ? 1 C G 4 1_555 D C 5 1_555 C G 5 1_555 D C 4 1_555 -0.214 -1.268 3.345 1.282 5.650 36.153 -2.791 0.516 3.109 9.033 -2.049 36.599 12 MM_G82G83:C93C94_NN M 82 ? N 94 ? M 83 ? N 93 ? 1 C G 5 1_555 D C 4 1_555 C C 6 1_555 D G 3 1_555 0.730 -1.145 2.999 1.012 4.254 34.153 -2.531 -1.093 2.860 7.206 -1.714 34.424 13 MM_G83C84:G92C93_NN M 83 ? N 93 ? M 84 ? N 92 ? 1 C C 6 1_555 D G 3 1_555 C G 7 1_555 D C 2 1_555 -0.023 -1.544 3.502 1.423 11.249 29.516 -4.901 0.303 2.740 21.122 -2.672 31.574 14 MM_C84G85:C91G92_NN M 84 ? N 92 ? M 85 ? N 91 ? 1 C G 7 1_555 D C 2 1_555 C G 8 1_555 D C 1 1_555 0.012 -1.501 3.266 2.521 5.494 31.659 -3.646 0.410 2.963 9.956 -4.568 32.216 15 MM_G85G86:C90C91_NN M 85 ? N 91 ? M 86 ? N 90 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6ZQ9 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7A9P _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.047101 _atom_sites.fract_transf_matrix[1][2] 0.000665 _atom_sites.fract_transf_matrix[1][3] 0.006815 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.037574 _atom_sites.fract_transf_matrix[2][3] 0.010676 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026944 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 P 15 15 6.435 1.907 4.179 27.157 1.780 0.526 1.491 68.164 1.115 ZN ? ? ? ? ? ? ? ? ? ? ? ZN+2 30 28 11.972 2.995 7.386 0.203 6.467 7.083 1.394 18.099 0.781 # loop_