HEADER TRANSFERASE 04-SEP-20 7AAB TITLE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN PARP1 IN COMPLEX TITLE 2 WITH INHIBITOR EB-47 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY [ADP-RIBOSE] POLYMERASE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (662-1101); COMPND 5 SYNONYM: PARP-1,ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 1,ARTD1, COMPND 6 DNA ADP-RIBOSYLTRANSFERASE PARP1,NAD(+) ADP-RIBOSYLTRANSFERASE 1, COMPND 7 ADPRT 1,POLY[ADP-RIBOSE] SYNTHASE 1,PROTEIN POLY-ADP- COMPND 8 RIBOSYLTRANSFERASE PARP1; COMPND 9 EC: 2.4.2.30,2.4.2.-; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PARP1, ADPRT, PPOL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24A KEYWDS PARP INHIBITOR, PARYLATION, SUBSTRATE MIMETIC, INHIBITOR, NADH KEYWDS 2 ANALOG, EB47, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHIMPL,T.E.H.OGDEN,J.-C.YANG,L.E.EASTON,E.UNDERWOOD,P.B.RAWLINS, AUTHOR 2 J.W.JOHANNES,K.J.EMBREY,D.NEUHAUS REVDAT 5 23-OCT-24 7AAB 1 REMARK REVDAT 4 01-MAY-24 7AAB 1 REMARK REVDAT 3 10-MAR-21 7AAB 1 JRNL REVDAT 2 10-FEB-21 7AAB 1 JRNL REVDAT 1 13-JAN-21 7AAB 0 JRNL AUTH T.E.H.OGDEN,J.C.YANG,M.SCHIMPL,L.E.EASTON,E.UNDERWOOD, JRNL AUTH 2 P.B.RAWLINS,M.M.MCCAULEY,M.F.LANGELIER,J.M.PASCAL, JRNL AUTH 3 K.J.EMBREY,D.NEUHAUS JRNL TITL DYNAMICS OF THE HD REGULATORY SUBDOMAIN OF PARP-1; SUBSTRATE JRNL TITL 2 ACCESS AND ALLOSTERY IN PARP ACTIVATION AND INHIBITION. JRNL REF NUCLEIC ACIDS RES. V. 49 2266 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 33511412 JRNL DOI 10.1093/NAR/GKAB020 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 116.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 69.3 REMARK 3 NUMBER OF REFLECTIONS : 19625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 962 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 48 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.95 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 10.26 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 409 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2618 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 389 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE : 0.2574 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.89 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 20 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5388 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 21 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.73610 REMARK 3 B22 (A**2) : -3.73610 REMARK 3 B33 (A**2) : 7.47210 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.420 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.359 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.881 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5597 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7595 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1955 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 989 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5597 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 740 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5928 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.10 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.99 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -35.2912 27.2822 -13.3905 REMARK 3 T TENSOR REMARK 3 T11: -0.1610 T22: -0.1597 REMARK 3 T33: -0.0884 T12: -0.0282 REMARK 3 T13: -0.0846 T23: 0.0516 REMARK 3 L TENSOR REMARK 3 L11: 3.9490 L22: 2.1315 REMARK 3 L33: 0.9194 L12: 0.6597 REMARK 3 L13: -0.6995 L23: -0.6337 REMARK 3 S TENSOR REMARK 3 S11: 0.0302 S12: 0.2717 S13: 0.2698 REMARK 3 S21: -0.1117 S22: 0.0705 S23: 0.3056 REMARK 3 S31: -0.0399 S32: -0.1190 S33: -0.1008 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -3.0683 44.5634 13.4270 REMARK 3 T TENSOR REMARK 3 T11: -0.1900 T22: -0.1174 REMARK 3 T33: -0.1519 T12: -0.0134 REMARK 3 T13: -0.0098 T23: -0.1003 REMARK 3 L TENSOR REMARK 3 L11: 3.0523 L22: 3.0437 REMARK 3 L33: 0.8603 L12: 0.9820 REMARK 3 L13: -0.5883 L23: -0.1135 REMARK 3 S TENSOR REMARK 3 S11: 0.0972 S12: -0.1380 S13: 0.3275 REMARK 3 S21: 0.2359 S22: 0.0037 S23: -0.0326 REMARK 3 S31: -0.0804 S32: -0.0017 S33: -0.1010 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AAB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1292106911. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97623 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 130609 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.430 REMARK 200 RESOLUTION RANGE LOW (A) : 116.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 61.3 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 2.49900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 1.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 15.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.40 REMARK 200 R MERGE FOR SHELL (I) : 0.12600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: INTERNAL MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 M AMMONIUM SULFATE, 25 % PEG3350, REMARK 280 0.1 M PCTP PH 5.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.12933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.25867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.69400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 92.82333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.56467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 660 REMARK 465 SER A 661 REMARK 465 GLY B 660 REMARK 465 SER B 661 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 684 CD CE NZ REMARK 470 LEU A 693 CG CD1 CD2 REMARK 470 GLN A 694 OE1 NE2 REMARK 470 LYS A 700 CG CD CE NZ REMARK 470 LYS A 703 CG CD CE NZ REMARK 470 MET A 746 CG SD CE REMARK 470 LYS A 747 CG CD CE NZ REMARK 470 LYS A 748 CG CD CE NZ REMARK 470 ASP A 783 CG OD1 OD2 REMARK 470 LYS A 849 CE NZ REMARK 470 LYS A 852 CG CD CE NZ REMARK 470 GLN A 853 CG CD OE1 NE2 REMARK 470 ARG A 865 CD NE CZ NH1 NH2 REMARK 470 ASP A 914 CG OD1 OD2 REMARK 470 LYS A 943 CG CD CE NZ REMARK 470 LYS B 684 CD CE NZ REMARK 470 LEU B 693 CG CD1 CD2 REMARK 470 GLN B 694 OE1 NE2 REMARK 470 LYS B 700 CG CD CE NZ REMARK 470 LYS B 703 CG CD CE NZ REMARK 470 ARG B 704 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 728 CG CD OE1 NE2 REMARK 470 LYS B 747 CG CD CE NZ REMARK 470 LYS B 748 CG CD CE NZ REMARK 470 ASP B 783 CG OD1 OD2 REMARK 470 LYS B 816 CD CE NZ REMARK 470 LYS B 849 CG CD CE NZ REMARK 470 LYS B 852 CG CD CE NZ REMARK 470 GLN B 853 CG CD OE1 NE2 REMARK 470 ASP B 914 CG OD1 OD2 REMARK 470 LYS B 940 CD CE NZ REMARK 470 LYS B 943 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 663 134.61 -39.70 REMARK 500 ASN A 753 -40.73 -135.08 REMARK 500 HIS A 826 57.88 -94.86 REMARK 500 HIS A 855 158.26 -44.04 REMARK 500 HIS A 909 72.89 59.35 REMARK 500 ASP A 981 78.78 50.03 REMARK 500 PHE B 677 41.03 -103.52 REMARK 500 HIS B 826 57.59 -94.78 REMARK 500 HIS B 855 160.61 -48.09 REMARK 500 ASN B 856 80.13 57.41 REMARK 500 HIS B 909 70.18 54.52 REMARK 500 ASP B 981 78.85 49.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7AAA RELATED DB: PDB REMARK 900 7AAA IS THE UNLIGANDED PROTEIN DBREF 7AAB A 662 1011 UNP P09874 PARP1_HUMAN 662 1011 DBREF 7AAB B 662 1011 UNP P09874 PARP1_HUMAN 662 1011 SEQADV 7AAB GLY A 660 UNP P09874 EXPRESSION TAG SEQADV 7AAB SER A 661 UNP P09874 EXPRESSION TAG SEQADV 7AAB ALA A 762 UNP P09874 VAL 762 ENGINEERED MUTATION SEQADV 7AAB GLY B 660 UNP P09874 EXPRESSION TAG SEQADV 7AAB SER B 661 UNP P09874 EXPRESSION TAG SEQADV 7AAB ALA B 762 UNP P09874 VAL 762 ENGINEERED MUTATION SEQRES 1 A 352 GLY SER LYS SER LYS LEU PRO LYS PRO VAL GLN ASP LEU SEQRES 2 A 352 ILE LYS MET ILE PHE ASP VAL GLU SER MET LYS LYS ALA SEQRES 3 A 352 MET VAL GLU TYR GLU ILE ASP LEU GLN LYS MET PRO LEU SEQRES 4 A 352 GLY LYS LEU SER LYS ARG GLN ILE GLN ALA ALA TYR SER SEQRES 5 A 352 ILE LEU SER GLU VAL GLN GLN ALA VAL SER GLN GLY SER SEQRES 6 A 352 SER ASP SER GLN ILE LEU ASP LEU SER ASN ARG PHE TYR SEQRES 7 A 352 THR LEU ILE PRO HIS ASP PHE GLY MET LYS LYS PRO PRO SEQRES 8 A 352 LEU LEU ASN ASN ALA ASP SER VAL GLN ALA LYS ALA GLU SEQRES 9 A 352 MET LEU ASP ASN LEU LEU ASP ILE GLU VAL ALA TYR SER SEQRES 10 A 352 LEU LEU ARG GLY GLY SER ASP ASP SER SER LYS ASP PRO SEQRES 11 A 352 ILE ASP VAL ASN TYR GLU LYS LEU LYS THR ASP ILE LYS SEQRES 12 A 352 VAL VAL ASP ARG ASP SER GLU GLU ALA GLU ILE ILE ARG SEQRES 13 A 352 LYS TYR VAL LYS ASN THR HIS ALA THR THR HIS ASN ALA SEQRES 14 A 352 TYR ASP LEU GLU VAL ILE ASP ILE PHE LYS ILE GLU ARG SEQRES 15 A 352 GLU GLY GLU CYS GLN ARG TYR LYS PRO PHE LYS GLN LEU SEQRES 16 A 352 HIS ASN ARG ARG LEU LEU TRP HIS GLY SER ARG THR THR SEQRES 17 A 352 ASN PHE ALA GLY ILE LEU SER GLN GLY LEU ARG ILE ALA SEQRES 18 A 352 PRO PRO GLU ALA PRO VAL THR GLY TYR MET PHE GLY LYS SEQRES 19 A 352 GLY ILE TYR PHE ALA ASP MET VAL SER LYS SER ALA ASN SEQRES 20 A 352 TYR CYS HIS THR SER GLN GLY ASP PRO ILE GLY LEU ILE SEQRES 21 A 352 LEU LEU GLY GLU VAL ALA LEU GLY ASN MET TYR GLU LEU SEQRES 22 A 352 LYS HIS ALA SER HIS ILE SER LYS LEU PRO LYS GLY LYS SEQRES 23 A 352 HIS SER VAL LYS GLY LEU GLY LYS THR THR PRO ASP PRO SEQRES 24 A 352 SER ALA ASN ILE SER LEU ASP GLY VAL ASP VAL PRO LEU SEQRES 25 A 352 GLY THR GLY ILE SER SER GLY VAL ASN ASP THR SER LEU SEQRES 26 A 352 LEU TYR ASN GLU TYR ILE VAL TYR ASP ILE ALA GLN VAL SEQRES 27 A 352 ASN LEU LYS TYR LEU LEU LYS LEU LYS PHE ASN PHE LYS SEQRES 28 A 352 THR SEQRES 1 B 352 GLY SER LYS SER LYS LEU PRO LYS PRO VAL GLN ASP LEU SEQRES 2 B 352 ILE LYS MET ILE PHE ASP VAL GLU SER MET LYS LYS ALA SEQRES 3 B 352 MET VAL GLU TYR GLU ILE ASP LEU GLN LYS MET PRO LEU SEQRES 4 B 352 GLY LYS LEU SER LYS ARG GLN ILE GLN ALA ALA TYR SER SEQRES 5 B 352 ILE LEU SER GLU VAL GLN GLN ALA VAL SER GLN GLY SER SEQRES 6 B 352 SER ASP SER GLN ILE LEU ASP LEU SER ASN ARG PHE TYR SEQRES 7 B 352 THR LEU ILE PRO HIS ASP PHE GLY MET LYS LYS PRO PRO SEQRES 8 B 352 LEU LEU ASN ASN ALA ASP SER VAL GLN ALA LYS ALA GLU SEQRES 9 B 352 MET LEU ASP ASN LEU LEU ASP ILE GLU VAL ALA TYR SER SEQRES 10 B 352 LEU LEU ARG GLY GLY SER ASP ASP SER SER LYS ASP PRO SEQRES 11 B 352 ILE ASP VAL ASN TYR GLU LYS LEU LYS THR ASP ILE LYS SEQRES 12 B 352 VAL VAL ASP ARG ASP SER GLU GLU ALA GLU ILE ILE ARG SEQRES 13 B 352 LYS TYR VAL LYS ASN THR HIS ALA THR THR HIS ASN ALA SEQRES 14 B 352 TYR ASP LEU GLU VAL ILE ASP ILE PHE LYS ILE GLU ARG SEQRES 15 B 352 GLU GLY GLU CYS GLN ARG TYR LYS PRO PHE LYS GLN LEU SEQRES 16 B 352 HIS ASN ARG ARG LEU LEU TRP HIS GLY SER ARG THR THR SEQRES 17 B 352 ASN PHE ALA GLY ILE LEU SER GLN GLY LEU ARG ILE ALA SEQRES 18 B 352 PRO PRO GLU ALA PRO VAL THR GLY TYR MET PHE GLY LYS SEQRES 19 B 352 GLY ILE TYR PHE ALA ASP MET VAL SER LYS SER ALA ASN SEQRES 20 B 352 TYR CYS HIS THR SER GLN GLY ASP PRO ILE GLY LEU ILE SEQRES 21 B 352 LEU LEU GLY GLU VAL ALA LEU GLY ASN MET TYR GLU LEU SEQRES 22 B 352 LYS HIS ALA SER HIS ILE SER LYS LEU PRO LYS GLY LYS SEQRES 23 B 352 HIS SER VAL LYS GLY LEU GLY LYS THR THR PRO ASP PRO SEQRES 24 B 352 SER ALA ASN ILE SER LEU ASP GLY VAL ASP VAL PRO LEU SEQRES 25 B 352 GLY THR GLY ILE SER SER GLY VAL ASN ASP THR SER LEU SEQRES 26 B 352 LEU TYR ASN GLU TYR ILE VAL TYR ASP ILE ALA GLN VAL SEQRES 27 B 352 ASN LEU LYS TYR LEU LEU LYS LEU LYS PHE ASN PHE LYS SEQRES 28 B 352 THR HET UHB A1101 39 HET SO4 A1102 5 HET SO4 A1103 5 HET UHB B1101 39 HET SO4 B1102 5 HET SO4 B1103 5 HETNAM UHB 2-[4-[(2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4- HETNAM 2 UHB BIS(OXIDANYL)OXOLAN-2-YL]CARBONYLPIPERAZIN-1-YL]-N-(1- HETNAM 3 UHB OXIDANYLIDENE-2,3-DIHYDROISOINDOL-4-YL)ETHANAMIDE HETNAM SO4 SULFATE ION FORMUL 3 UHB 2(C24 H27 N9 O6) FORMUL 4 SO4 4(O4 S 2-) FORMUL 9 HOH *21(H2 O) HELIX 1 AA1 PRO A 666 PHE A 677 1 12 HELIX 2 AA2 ASP A 678 TYR A 689 1 12 HELIX 3 AA3 SER A 702 GLN A 722 1 21 HELIX 4 AA4 SER A 725 ILE A 740 1 16 HELIX 5 AA5 ASN A 754 GLY A 780 1 27 HELIX 6 AA6 ASP A 788 LEU A 797 1 10 HELIX 7 AA7 SER A 808 THR A 821 1 14 HELIX 8 AA8 GLY A 843 LYS A 849 1 7 HELIX 9 AA9 PRO A 850 LYS A 852 5 3 HELIX 10 AB1 ARG A 865 THR A 867 5 3 HELIX 11 AB2 ASN A 868 GLY A 876 1 9 HELIX 12 AB3 PRO A 885 TYR A 889 5 5 HELIX 13 AB4 MET A 900 ASN A 906 1 7 HELIX 14 AB5 TYR A 907 HIS A 909 5 3 HELIX 15 AB6 PRO A 958 ASN A 961 5 4 HELIX 16 AB7 ASP A 993 ALA A 995 5 3 HELIX 17 AB8 PRO B 666 PHE B 677 1 12 HELIX 18 AB9 ASP B 678 TYR B 689 1 12 HELIX 19 AC1 SER B 702 GLN B 722 1 21 HELIX 20 AC2 SER B 725 ILE B 740 1 16 HELIX 21 AC3 ASN B 754 GLY B 780 1 27 HELIX 22 AC4 ASP B 788 LEU B 797 1 10 HELIX 23 AC5 SER B 808 THR B 821 1 14 HELIX 24 AC6 GLY B 843 LYS B 849 1 7 HELIX 25 AC7 PRO B 850 LYS B 852 5 3 HELIX 26 AC8 ARG B 865 THR B 867 5 3 HELIX 27 AC9 ASN B 868 GLY B 876 1 9 HELIX 28 AD1 PRO B 885 TYR B 889 5 5 HELIX 29 AD2 MET B 900 ASN B 906 1 7 HELIX 30 AD3 TYR B 907 HIS B 909 5 3 HELIX 31 AD4 PRO B 958 ASN B 961 5 4 HELIX 32 AD5 ASP B 993 ALA B 995 5 3 SHEET 1 AA1 5 THR A 799 VAL A 803 0 SHEET 2 AA1 5 LEU A 831 ARG A 841 -1 O LYS A 838 N LYS A 802 SHEET 3 AA1 5 VAL A 997 PHE A1007 -1 O LYS A1004 N ILE A 834 SHEET 4 AA1 5 ILE A 916 ALA A 925 -1 N GLU A 923 O ASN A 998 SHEET 5 AA1 5 ARG A 857 GLY A 863 -1 N ARG A 858 O VAL A 924 SHEET 1 AA2 4 ILE A 895 ALA A 898 0 SHEET 2 AA2 4 GLU A 988 VAL A 991 -1 O VAL A 991 N ILE A 895 SHEET 3 AA2 4 SER A 947 GLY A 950 -1 N GLY A 950 O GLU A 988 SHEET 4 AA2 4 MET A 929 LEU A 932 1 N TYR A 930 O SER A 947 SHEET 1 AA3 2 THR A 954 PRO A 956 0 SHEET 2 AA3 2 GLY A 974 SER A 976 -1 O ILE A 975 N THR A 955 SHEET 1 AA4 2 ILE A 962 LEU A 964 0 SHEET 2 AA4 2 VAL A 967 VAL A 969 -1 O VAL A 969 N ILE A 962 SHEET 1 AA5 5 THR B 799 VAL B 803 0 SHEET 2 AA5 5 LEU B 831 ARG B 841 -1 O LYS B 838 N LYS B 802 SHEET 3 AA5 5 VAL B 997 PHE B1007 -1 O LYS B1004 N ILE B 834 SHEET 4 AA5 5 ILE B 916 ALA B 925 -1 N GLU B 923 O ASN B 998 SHEET 5 AA5 5 ARG B 857 GLY B 863 -1 N ARG B 858 O VAL B 924 SHEET 1 AA6 4 ILE B 895 ALA B 898 0 SHEET 2 AA6 4 GLU B 988 VAL B 991 -1 O VAL B 991 N ILE B 895 SHEET 3 AA6 4 SER B 947 GLY B 950 -1 N GLY B 950 O GLU B 988 SHEET 4 AA6 4 MET B 929 LEU B 932 1 N TYR B 930 O SER B 947 SHEET 1 AA7 2 THR B 954 PRO B 956 0 SHEET 2 AA7 2 GLY B 974 SER B 976 -1 O ILE B 975 N THR B 955 SHEET 1 AA8 2 ILE B 962 LEU B 964 0 SHEET 2 AA8 2 VAL B 967 VAL B 969 -1 O VAL B 969 N ILE B 962 SSBOND 1 CYS A 845 CYS B 845 1555 1555 2.04 CRYST1 134.899 134.899 111.388 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007413 0.004280 0.000000 0.00000 SCALE2 0.000000 0.008560 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008978 0.00000