HEADER MEMBRANE PROTEIN 02-OCT-20 7AKY TITLE CRYSTAL STRUCTURE OF THE VIRAL RHODOPSIN OLPVR1 IN P21212 SPACE GROUP CAVEAT 7AKY RESIDUES LEU A 223 AND LEU A 224 THAT ARE NEXT TO EACH OTHER CAVEAT 2 7AKY IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 7AKY BETWEEN C AND N IS 1.69. COMPND MOL_ID: 1; COMPND 2 MOLECULE: VIRAL RHODOPSIN OLPVR1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORGANIC LAKE PHYCODNAVIRUS; SOURCE 3 ORGANISM_TAXID: 938083; SOURCE 4 GENE: 162281038; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS RHODOPSIN, VIRAL RHODOPSIN, GIANT VIRUS, ION CHANNEL, RETINAL, ION KEYWDS 2 TRANSPORT, LIGHT-GATED CHANNEL, CHANNELRHODOPSIN, BACTERIORHODOPSIN, KEYWDS 3 MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.KOVALEV,D.ZABELSKII,A.ALEKSEEV,R.ASTASHKIN,V.GORDELIY REVDAT 2 31-JAN-24 7AKY 1 REMARK REVDAT 1 25-NOV-20 7AKY 0 JRNL AUTH D.ZABELSKII,A.ALEKSEEV,K.KOVALEV,V.RANKOVIC,T.BALANDIN, JRNL AUTH 2 D.SOLOVIOV,D.BRATANOV,E.SAVELYEVA,E.PODOLYAK,D.VOLKOV, JRNL AUTH 3 S.VAGANOVA,R.ASTASHKIN,I.CHIZHOV,N.YUTIN,M.RULEV,A.POPOV, JRNL AUTH 4 A.S.ERIA-OLIVEIRA,T.ROKITSKAYA,T.MAGER,Y.ANTONENKO, JRNL AUTH 5 R.ROSSELLI,G.ARMEEV,K.SHAITAN,M.VIVAUDOU,G.BULDT,A.ROGACHEV, JRNL AUTH 6 F.RODRIGUEZ-VALERA,M.KIRPICHNIKOV,T.MOSER,A.OFFENHAUSSER, JRNL AUTH 7 D.WILLBOLD,E.KOONIN,E.BAMBERG,V.GORDELIY JRNL TITL VIRAL RHODOPSINS 1 ARE AN UNIQUE FAMILY OF LIGHT-GATED JRNL TITL 2 CATION CHANNELS. JRNL REF NAT COMMUN V. 11 5707 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 33177509 JRNL DOI 10.1038/S41467-020-19457-7 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 54864 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2896 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3962 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 210 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1920 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 219 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.39000 REMARK 3 B22 (A**2) : 0.89000 REMARK 3 B33 (A**2) : -0.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.056 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.546 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2322 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2485 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3080 ; 1.048 ; 1.673 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5635 ; 1.388 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 6.665 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;38.743 ;22.766 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 364 ;16.011 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;23.378 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 285 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2306 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 504 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4781 ;10.934 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7AKY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292111572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57845 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 48.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 1.81000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6SQG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MM CACL2, 10 MM MGCL2, 24% PEG REMARK 280 6000, 100MM TRIS (PH 8.2), MONOPALMITOLEIN, LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 23.26250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.89800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.26250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.89800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 540 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 602 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 2 CG OD1 OD2 REMARK 470 GLU A 67 CD OE1 OE2 REMARK 470 ASP A 98 CG OD1 OD2 REMARK 470 ASP A 99 CG OD1 OD2 REMARK 470 LEU A 224 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 522 O HOH A 543 1.99 REMARK 500 OD2 ASP A 68 O HOH A 501 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C14 LFA A 420 C17 LFA A 420 2555 1.95 REMARK 500 OD1 ASN A 66 NH1 ARG A 102 1554 2.09 REMARK 500 CB ASP A 99 O HOH A 570 1556 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 64 39.32 -145.79 REMARK 500 LYR A 204 -62.10 -102.03 REMARK 500 LYR A 204 -61.91 -103.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LFA A 401 REMARK 610 LFA A 402 REMARK 610 LFA A 403 REMARK 610 LFA A 404 REMARK 610 LFA A 405 REMARK 610 LFA A 406 REMARK 610 LFA A 407 REMARK 610 LFA A 408 REMARK 610 LFA A 409 REMARK 610 LFA A 410 REMARK 610 LFA A 411 REMARK 610 LFA A 412 REMARK 610 LFA A 413 REMARK 610 LFA A 414 REMARK 610 LFA A 415 REMARK 610 LFA A 416 REMARK 610 LFA A 417 REMARK 610 LFA A 418 REMARK 610 LFA A 419 REMARK 610 LFA A 420 REMARK 610 LFA A 421 REMARK 610 97N A 422 DBREF 7AKY A 1 223 UNP F2Y337 F2Y337_9PHYC 1 223 SEQADV 7AKY LEU A 224 UNP F2Y337 EXPRESSION TAG SEQADV 7AKY GLU A 225 UNP F2Y337 EXPRESSION TAG SEQADV 7AKY HIS A 226 UNP F2Y337 EXPRESSION TAG SEQADV 7AKY HIS A 227 UNP F2Y337 EXPRESSION TAG SEQADV 7AKY HIS A 228 UNP F2Y337 EXPRESSION TAG SEQADV 7AKY HIS A 229 UNP F2Y337 EXPRESSION TAG SEQADV 7AKY HIS A 230 UNP F2Y337 EXPRESSION TAG SEQADV 7AKY HIS A 231 UNP F2Y337 EXPRESSION TAG SEQRES 1 A 231 MET ASP ASN ILE ILE MET THR ALA TYR ILE SER ILE PHE SEQRES 2 A 231 VAL GLN ILE ILE THR ALA ILE ILE SER VAL TYR GLY LEU SEQRES 3 A 231 PHE ILE PRO LEU ASN PHE LYS ASP ILE ILE LEU ARG GLU SEQRES 4 A 231 ILE LEU ILE LEU GLU LEU ILE VAL GLN ILE ILE GLU PHE SEQRES 5 A 231 ILE PHE TYR ILE TRP LEU ILE ILE THR LEU GLN SER ILE SEQRES 6 A 231 ASN GLU ASP ILE THR TYR VAL ARG TYR PHE ASP TRP VAL SEQRES 7 A 231 LEU THR THR PRO VAL MET LEU LEU THR THR VAL TYR PHE SEQRES 8 A 231 PHE GLU TYR MET ASN SER ASP ASP GLY ILE ARG LYS LYS SEQRES 9 A 231 GLU ILE ASN ASP ARG ASP TYR VAL TYR LEU PHE TYR ILE SEQRES 10 A 231 CYS LEU SER ASN PHE PHE MET LEU LEU ILE GLY TYR LEU SEQRES 11 A 231 GLY GLU THR LYS GLN ILE ASN LYS MET LEU THR LEU PHE SEQRES 12 A 231 GLY GLY SER PHE PHE LEU PHE LEU THR PHE TYR LEU LEU SEQRES 13 A 231 TYR VAL LYS TYR THR LYS GLU ASN TRP MET ASN TYR ILE SEQRES 14 A 231 VAL PHE TYR PHE MET PHE LEU VAL TRP PHE LEU TYR GLY SEQRES 15 A 231 PHE ALA PHE MET PHE PRO PHE SER ILE LYS ASN GLN MET SEQRES 16 A 231 TYR ASN ILE LEU ASP ILE VAL SER LYR ASN ILE TYR SER SEQRES 17 A 231 ILE PHE ILE PHE ILE VAL ILE LEU ASN GLN SER TYR LYS SEQRES 18 A 231 LEU LEU LEU GLU HIS HIS HIS HIS HIS HIS MODRES 7AKY LYR A 204 LYS MODIFIED RESIDUE HET LYR A 204 58 HET LFA A 401 12 HET LFA A 402 15 HET LFA A 403 15 HET LFA A 404 7 HET LFA A 405 10 HET LFA A 406 11 HET LFA A 407 9 HET LFA A 408 3 HET LFA A 409 7 HET LFA A 410 11 HET LFA A 411 5 HET LFA A 412 5 HET LFA A 413 8 HET LFA A 414 16 HET LFA A 415 15 HET LFA A 416 12 HET LFA A 417 8 HET LFA A 418 11 HET LFA A 419 6 HET LFA A 420 18 HET LFA A 421 4 HET 97N A 422 11 HETNAM LYR N~6~-[(2Z,4E,6E,8E)-3,7-DIMETHYL-9-(2,6,6- HETNAM 2 LYR TRIMETHYLCYCLOHEX-1-EN-1-YL)NONA-2,4,6,8- HETNAM 3 LYR TETRAENYL]LYSINE HETNAM LFA EICOSANE HETNAM 97N (2S)-2,3-DIHYDROXYPROPYL (9Z)-HEXADEC-9-ENOATE HETSYN LFA LIPID FRAGMENT FORMUL 1 LYR C26 H42 N2 O2 FORMUL 2 LFA 21(C20 H42) FORMUL 23 97N C19 H36 O4 FORMUL 24 HOH *106(H2 O) HELIX 1 AA1 ASP A 2 LEU A 26 1 25 HELIX 2 AA2 ASN A 31 LYS A 33 5 3 HELIX 3 AA3 ASP A 34 LEU A 62 1 29 HELIX 4 AA4 GLN A 63 ILE A 65 5 3 HELIX 5 AA5 ILE A 69 TYR A 71 5 3 HELIX 6 AA6 VAL A 72 SER A 97 1 26 HELIX 7 AA7 ARG A 102 THR A 133 1 32 HELIX 8 AA8 ASN A 137 THR A 161 1 25 HELIX 9 AA9 ASN A 164 PHE A 185 1 22 HELIX 10 AB1 PRO A 188 LYR A 204 1 17 HELIX 11 AB2 LYR A 204 LEU A 224 1 21 LINK C SER A 203 N ALYR A 204 1555 1555 1.34 LINK C SER A 203 N BLYR A 204 1555 1555 1.34 LINK C ALYR A 204 N AASN A 205 1555 1555 1.33 LINK C BLYR A 204 N BASN A 205 1555 1555 1.33 CRYST1 46.525 115.796 53.529 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021494 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008636 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018681 0.00000