HEADER SIGNALING PROTEIN 06-OCT-20 7ALM TITLE CRYSTAL STRUCTURE OF HUMAN GDAP1 AT 2.8 ANGSTROM RESOLUTION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GANGLIOSIDE-INDUCED DIFFERENTIATION-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GDAP1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GDAP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PTH-27 KEYWDS OUTER MITOCHONDRIAL MEMBRANE PROTEIN, CHARCOT-MARIE-TOOTH, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.T.T.NGUYEN,A.SUTINEN,A.RAASAKKA,P.KURSULA REVDAT 1 24-FEB-21 7ALM 0 JRNL AUTH G.T.T.NGUYEN,A.SUTINEN,A.RAASAKKA,G.MURUGANANDAM,R.LORIS, JRNL AUTH 2 P.KURSULA JRNL TITL STRUCTURE OF THE COMPLETE DIMERIC HUMAN GDAP1 CORE DOMAIN JRNL TITL 2 PROVIDES INSIGHTS INTO LIGAND BINDING AND CLUSTERING OF JRNL TITL 3 DISEASE MUTATIONS. JRNL REF FRONT MOL BIOSCI V. 7 31232 2020 JRNL REFN ESSN 2296-889X JRNL PMID 33585569 JRNL DOI 10.3389/FMOLB.2020.631232 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.GRZECHOWIAK,B.SEKULA,M.JASKOLSKI,M.RUSZKOWSKI REMARK 1 TITL SERENDIPITOUS CRYSTALLIZATION OF E. COLI HPII CATALASE, A REMARK 1 TITL 2 SEQUEL TO "THE TALE USUALLY NOT TOLD". REMARK 1 REF ACTA BIOCHIM.POL. 2021 REMARK 1 REFN ISSN 0001-527X REMARK 1 PMID 33485289 REMARK 1 DOI 10.18388/ABP.2020_5501 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18_3861 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 24865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1251 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.3600 - 5.8200 0.99 2767 145 0.2300 0.2405 REMARK 3 2 5.8200 - 4.6200 0.99 2661 142 0.2080 0.2234 REMARK 3 3 4.6200 - 4.0400 1.00 2615 138 0.2001 0.2210 REMARK 3 4 4.0400 - 3.6700 1.00 2619 139 0.2354 0.2590 REMARK 3 5 3.6700 - 3.4100 1.00 2628 139 0.2522 0.2562 REMARK 3 6 3.4100 - 3.2100 1.00 2573 138 0.2737 0.2998 REMARK 3 7 3.2100 - 3.0400 1.00 2571 136 0.3173 0.3682 REMARK 3 8 3.0400 - 2.9100 1.00 2593 136 0.3210 0.3417 REMARK 3 9 2.9100 - 2.8000 1.00 2587 138 0.3409 0.3999 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.447 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.256 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4096 REMARK 3 ANGLE : 0.462 5547 REMARK 3 CHIRALITY : 0.036 619 REMARK 3 PLANARITY : 0.002 698 REMARK 3 DIHEDRAL : 17.972 1557 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.1125 -5.1105 -9.2051 REMARK 3 T TENSOR REMARK 3 T11: 0.3088 T22: 0.3463 REMARK 3 T33: 0.4552 T12: -0.0298 REMARK 3 T13: 0.0111 T23: 0.0593 REMARK 3 L TENSOR REMARK 3 L11: 7.0176 L22: 4.5440 REMARK 3 L33: 7.6295 L12: -3.4657 REMARK 3 L13: -0.3023 L23: 1.5551 REMARK 3 S TENSOR REMARK 3 S11: 0.1405 S12: 0.2010 S13: 0.4613 REMARK 3 S21: -0.2283 S22: -0.0341 S23: -0.0035 REMARK 3 S31: -0.3480 S32: -0.1710 S33: -0.1059 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7742 -22.2692 7.1477 REMARK 3 T TENSOR REMARK 3 T11: 0.4059 T22: 0.3913 REMARK 3 T33: 0.4344 T12: -0.0376 REMARK 3 T13: -0.0278 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 7.1953 L22: 1.7792 REMARK 3 L33: 5.2881 L12: -0.2725 REMARK 3 L13: -3.8187 L23: 0.8141 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: 0.1617 S13: -0.4289 REMARK 3 S21: 0.3441 S22: -0.2082 S23: 0.2678 REMARK 3 S31: 0.3520 S32: -0.6550 S33: 0.2424 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3943 -14.3425 2.0719 REMARK 3 T TENSOR REMARK 3 T11: 0.2992 T22: 0.2896 REMARK 3 T33: 0.3793 T12: -0.0475 REMARK 3 T13: -0.0783 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 6.9470 L22: 4.4131 REMARK 3 L33: 5.9968 L12: -1.4962 REMARK 3 L13: -2.1532 L23: 0.6449 REMARK 3 S TENSOR REMARK 3 S11: 0.1362 S12: -0.2252 S13: -0.0762 REMARK 3 S21: 0.1239 S22: -0.1887 S23: -0.4942 REMARK 3 S31: -0.0323 S32: 0.3357 S33: 0.0293 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1086 0.4568 -14.1991 REMARK 3 T TENSOR REMARK 3 T11: 0.4577 T22: 0.7691 REMARK 3 T33: 0.5103 T12: 0.1048 REMARK 3 T13: 0.0570 T23: 0.1702 REMARK 3 L TENSOR REMARK 3 L11: 7.5060 L22: 3.9261 REMARK 3 L33: 4.2013 L12: -0.3999 REMARK 3 L13: -0.1475 L23: 0.6873 REMARK 3 S TENSOR REMARK 3 S11: 0.0787 S12: -0.5019 S13: 0.0724 REMARK 3 S21: 0.1660 S22: 0.0913 S23: 0.1299 REMARK 3 S31: -0.2776 S32: -1.1780 S33: -0.0565 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 118 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4631 -7.7103 -27.0300 REMARK 3 T TENSOR REMARK 3 T11: 0.7661 T22: 1.2547 REMARK 3 T33: 0.6900 T12: -0.3955 REMARK 3 T13: -0.0595 T23: 0.2952 REMARK 3 L TENSOR REMARK 3 L11: 1.9493 L22: 2.2620 REMARK 3 L33: 4.9454 L12: -0.4769 REMARK 3 L13: 1.1997 L23: -0.9316 REMARK 3 S TENSOR REMARK 3 S11: 0.2341 S12: -0.9334 S13: -0.5661 REMARK 3 S21: -0.1946 S22: 0.0309 S23: 0.4674 REMARK 3 S31: 1.2149 S32: -1.9319 S33: -0.1146 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ALM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292111566. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : DOUBLE CRYSTAL SILICON REMARK 200 MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 31, 2020 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24883 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 42.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.36200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: TETRAHEDRAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM FORMATE, 20 % PEG3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.40400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.29750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.93900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.29750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.40400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.93900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 73 REMARK 465 THR A 74 REMARK 465 GLY A 75 REMARK 465 GLU A 76 REMARK 465 ARG A 161 REMARK 465 SER A 162 REMARK 465 GLN A 163 REMARK 465 ILE A 164 REMARK 465 GLY A 165 REMARK 465 ASN A 166 REMARK 465 THR A 167 REMARK 465 GLU A 168 REMARK 465 SER A 169 REMARK 465 GLU A 170 REMARK 465 LEU A 171 REMARK 465 LYS A 172 REMARK 465 LYS A 173 REMARK 465 LEU A 174 REMARK 465 ALA A 175 REMARK 465 GLU A 176 REMARK 465 GLU A 177 REMARK 465 ASN A 178 REMARK 465 PRO A 179 REMARK 465 ASP A 180 REMARK 465 LEU A 181 REMARK 465 GLN A 182 REMARK 465 GLU A 183 REMARK 465 ALA A 184 REMARK 465 TYR A 185 REMARK 465 SER B 73 REMARK 465 THR B 74 REMARK 465 GLY B 75 REMARK 465 GLU B 76 REMARK 465 GLN B 163 REMARK 465 ILE B 164 REMARK 465 GLY B 165 REMARK 465 ASN B 166 REMARK 465 THR B 167 REMARK 465 GLU B 168 REMARK 465 SER B 169 REMARK 465 GLU B 170 REMARK 465 LEU B 171 REMARK 465 LYS B 172 REMARK 465 LYS B 173 REMARK 465 LEU B 174 REMARK 465 ALA B 175 REMARK 465 GLU B 176 REMARK 465 GLU B 177 REMARK 465 ASN B 178 REMARK 465 PRO B 179 REMARK 465 ASP B 180 REMARK 465 LEU B 181 REMARK 465 GLN B 182 REMARK 465 GLU B 183 REMARK 465 ALA B 184 REMARK 465 TYR B 185 REMARK 465 ILE B 186 REMARK 465 ALA B 187 REMARK 465 LYS B 188 REMARK 465 GLN B 189 REMARK 465 LYS B 190 REMARK 465 ARG B 191 REMARK 465 LEU B 192 REMARK 465 LYS B 193 REMARK 465 SER B 194 REMARK 465 LYS B 195 REMARK 465 LEU B 196 REMARK 465 LEU B 197 REMARK 465 ASP B 198 REMARK 465 HIS B 199 REMARK 465 ASP B 200 REMARK 465 ASN B 227 REMARK 465 GLU B 228 REMARK 465 GLU B 229 REMARK 465 THR B 230 REMARK 465 PRO B 231 REMARK 465 GLU B 232 REMARK 465 GLU B 233 REMARK 465 GLY B 234 REMARK 465 GLN B 235 REMARK 465 GLY B 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 89 144.91 68.35 REMARK 500 ASN B 64 60.49 60.42 REMARK 500 ARG B 70 56.29 -104.96 REMARK 500 CYS B 88 -83.68 -104.70 REMARK 500 TRP B 238 -166.76 -119.06 REMARK 500 ARG B 273 72.19 41.00 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ALM A 23 302 UNP Q8TB36 GDAP1_HUMAN 23 302 DBREF 7ALM B 23 302 UNP Q8TB36 GDAP1_HUMAN 23 302 SEQRES 1 A 280 GLU VAL LYS LEU ILE LEU TYR HIS TRP THR HIS SER PHE SEQRES 2 A 280 SER SER GLN LYS VAL ARG LEU VAL ILE ALA GLU LYS ALA SEQRES 3 A 280 LEU LYS CYS GLU GLU HIS ASP VAL SER LEU PRO LEU SER SEQRES 4 A 280 GLU HIS ASN GLU PRO TRP PHE MET ARG LEU ASN SER THR SEQRES 5 A 280 GLY GLU VAL PRO VAL LEU ILE HIS GLY GLU ASN ILE ILE SEQRES 6 A 280 CYS GLU ALA THR GLN ILE ILE ASP TYR LEU GLU GLN THR SEQRES 7 A 280 PHE LEU ASP GLU ARG THR PRO ARG LEU MET PRO ASP LYS SEQRES 8 A 280 GLU SER MET TYR TYR PRO ARG VAL GLN HIS TYR ARG GLU SEQRES 9 A 280 LEU LEU ASP SER LEU PRO MET ASP ALA TYR THR HIS GLY SEQRES 10 A 280 CYS ILE LEU HIS PRO GLU LEU THR VAL ASP SER MET ILE SEQRES 11 A 280 PRO ALA TYR ALA THR THR ARG ILE ARG SER GLN ILE GLY SEQRES 12 A 280 ASN THR GLU SER GLU LEU LYS LYS LEU ALA GLU GLU ASN SEQRES 13 A 280 PRO ASP LEU GLN GLU ALA TYR ILE ALA LYS GLN LYS ARG SEQRES 14 A 280 LEU LYS SER LYS LEU LEU ASP HIS ASP ASN VAL LYS TYR SEQRES 15 A 280 LEU LYS LYS ILE LEU ASP GLU LEU GLU LYS VAL LEU ASP SEQRES 16 A 280 GLN VAL GLU THR GLU LEU GLN ARG ARG ASN GLU GLU THR SEQRES 17 A 280 PRO GLU GLU GLY GLN GLN PRO TRP LEU CYS GLY GLU SER SEQRES 18 A 280 PHE THR LEU ALA ASP VAL SER LEU ALA VAL THR LEU HIS SEQRES 19 A 280 ARG LEU LYS PHE LEU GLY PHE ALA ARG ARG ASN TRP GLY SEQRES 20 A 280 ASN GLY LYS ARG PRO ASN LEU GLU THR TYR TYR GLU ARG SEQRES 21 A 280 VAL LEU LYS ARG LYS THR PHE ASN LYS VAL LEU GLY HIS SEQRES 22 A 280 VAL ASN ASN ILE LEU ILE SER SEQRES 1 B 280 GLU VAL LYS LEU ILE LEU TYR HIS TRP THR HIS SER PHE SEQRES 2 B 280 SER SER GLN LYS VAL ARG LEU VAL ILE ALA GLU LYS ALA SEQRES 3 B 280 LEU LYS CYS GLU GLU HIS ASP VAL SER LEU PRO LEU SER SEQRES 4 B 280 GLU HIS ASN GLU PRO TRP PHE MET ARG LEU ASN SER THR SEQRES 5 B 280 GLY GLU VAL PRO VAL LEU ILE HIS GLY GLU ASN ILE ILE SEQRES 6 B 280 CYS GLU ALA THR GLN ILE ILE ASP TYR LEU GLU GLN THR SEQRES 7 B 280 PHE LEU ASP GLU ARG THR PRO ARG LEU MET PRO ASP LYS SEQRES 8 B 280 GLU SER MET TYR TYR PRO ARG VAL GLN HIS TYR ARG GLU SEQRES 9 B 280 LEU LEU ASP SER LEU PRO MET ASP ALA TYR THR HIS GLY SEQRES 10 B 280 CYS ILE LEU HIS PRO GLU LEU THR VAL ASP SER MET ILE SEQRES 11 B 280 PRO ALA TYR ALA THR THR ARG ILE ARG SER GLN ILE GLY SEQRES 12 B 280 ASN THR GLU SER GLU LEU LYS LYS LEU ALA GLU GLU ASN SEQRES 13 B 280 PRO ASP LEU GLN GLU ALA TYR ILE ALA LYS GLN LYS ARG SEQRES 14 B 280 LEU LYS SER LYS LEU LEU ASP HIS ASP ASN VAL LYS TYR SEQRES 15 B 280 LEU LYS LYS ILE LEU ASP GLU LEU GLU LYS VAL LEU ASP SEQRES 16 B 280 GLN VAL GLU THR GLU LEU GLN ARG ARG ASN GLU GLU THR SEQRES 17 B 280 PRO GLU GLU GLY GLN GLN PRO TRP LEU CYS GLY GLU SER SEQRES 18 B 280 PHE THR LEU ALA ASP VAL SER LEU ALA VAL THR LEU HIS SEQRES 19 B 280 ARG LEU LYS PHE LEU GLY PHE ALA ARG ARG ASN TRP GLY SEQRES 20 B 280 ASN GLY LYS ARG PRO ASN LEU GLU THR TYR TYR GLU ARG SEQRES 21 B 280 VAL LEU LYS ARG LYS THR PHE ASN LYS VAL LEU GLY HIS SEQRES 22 B 280 VAL ASN ASN ILE LEU ILE SER FORMUL 3 HOH *39(H2 O) HELIX 1 AA1 SER A 34 LYS A 47 1 14 HELIX 2 AA2 PRO A 66 ARG A 70 5 5 HELIX 3 AA3 GLU A 89 PHE A 101 1 13 HELIX 4 AA4 TYR A 117 SER A 130 1 14 HELIX 5 AA5 PRO A 132 LEU A 142 1 11 HELIX 6 AA6 HIS A 143 THR A 147 5 5 HELIX 7 AA7 ALA A 154 ILE A 160 1 7 HELIX 8 AA8 ALA A 187 THR A 230 1 44 HELIX 9 AA9 THR A 245 LEU A 261 1 17 HELIX 10 AB1 ARG A 273 LEU A 284 1 12 HELIX 11 AB2 ARG A 286 GLY A 294 1 9 HELIX 12 AB3 SER B 34 ALA B 48 1 15 HELIX 13 AB4 GLU B 89 PHE B 101 1 13 HELIX 14 AB5 TYR B 117 SER B 130 1 14 HELIX 15 AB6 PRO B 132 LEU B 142 1 11 HELIX 16 AB7 HIS B 143 THR B 147 5 5 HELIX 17 AB8 ALA B 154 ARG B 161 1 8 HELIX 18 AB9 VAL B 202 ARG B 225 1 24 HELIX 19 AC1 THR B 245 GLY B 262 1 18 HELIX 20 AC2 ARG B 273 LYS B 285 1 13 HELIX 21 AC3 ARG B 286 GLY B 294 1 9 SHEET 1 AA1 4 GLU A 52 ASP A 55 0 SHEET 2 AA1 4 LEU A 26 HIS A 30 1 N LEU A 26 O GLU A 52 SHEET 3 AA1 4 VAL A 79 HIS A 82 -1 O ILE A 81 N ILE A 27 SHEET 4 AA1 4 ASN A 85 CYS A 88 -1 O ILE A 87 N LEU A 80 SHEET 1 AA2 4 GLU B 52 ASP B 55 0 SHEET 2 AA2 4 LEU B 26 HIS B 30 1 N LEU B 28 O HIS B 54 SHEET 3 AA2 4 VAL B 79 HIS B 82 -1 O ILE B 81 N ILE B 27 SHEET 4 AA2 4 ASN B 85 ILE B 87 -1 O ILE B 87 N LEU B 80 SSBOND 1 CYS A 88 CYS B 88 1555 1555 2.04 CRYST1 72.808 115.878 116.595 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013735 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008630 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008577 0.00000