HEADER STRUCTURAL PROTEIN 07-OCT-20 7ALR TITLE CRYSTAL STRUCTURE OF TD1-GATORBULIN1 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUBULIN ALPHA-1B CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-TUBULIN UBIQUITOUS,TUBULIN K-ALPHA-1,TUBULIN ALPHA- COMPND 5 UBIQUITOUS CHAIN; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TUBULIN BETA-3 CHAIN; COMPND 8 CHAIN: B; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D1; COMPND 11 CHAIN: F; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 7 ORGANISM_COMMON: BOVINE; SOURCE 8 ORGANISM_TAXID: 9913; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TUBULIN, GATORBULIN, ANTITUMORAL, MICROTUBULE, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.A.OLIVA,J.F.DIAZ REVDAT 3 31-JAN-24 7ALR 1 REMARK REVDAT 2 10-MAR-21 7ALR 1 JRNL REVDAT 1 03-MAR-21 7ALR 0 JRNL AUTH S.MATTHEW,Q.Y.CHEN,R.RATNAYAKE,C.S.FERMAINTT,D.LUCENA-AGELL, JRNL AUTH 2 F.BONATO,A.E.PROTA,S.T.LIM,X.WANG,J.F.DIAZ,A.L.RISINGER, JRNL AUTH 3 V.J.PAUL,M.A.OLIVA,H.LUESCH JRNL TITL GATORBULIN-1, A DISTINCT CYCLODEPSIPEPTIDE CHEMOTYPE, JRNL TITL 2 TARGETS A SEVENTH TUBULIN PHARMACOLOGICAL SITE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 33619102 JRNL DOI 10.1073/PNAS.2021847118 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 80966 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 4072 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2080 - 5.9263 0.99 2732 149 0.1694 0.1860 REMARK 3 2 5.9263 - 4.7050 1.00 2707 149 0.1467 0.1748 REMARK 3 3 4.7050 - 4.1106 1.00 2680 149 0.1273 0.1500 REMARK 3 4 4.1106 - 3.7349 1.00 2696 137 0.1377 0.1813 REMARK 3 5 3.7349 - 3.4673 1.00 2690 114 0.1560 0.1764 REMARK 3 6 3.4673 - 3.2629 1.00 2684 141 0.1660 0.2081 REMARK 3 7 3.2629 - 3.0995 1.00 2692 124 0.1792 0.1929 REMARK 3 8 3.0995 - 2.9646 1.00 2656 148 0.1721 0.2247 REMARK 3 9 2.9646 - 2.8505 0.99 2660 148 0.1725 0.2111 REMARK 3 10 2.8505 - 2.7522 0.99 2625 152 0.1741 0.2250 REMARK 3 11 2.7522 - 2.6661 0.99 2648 148 0.1715 0.2072 REMARK 3 12 2.6661 - 2.5899 1.00 2658 135 0.1636 0.1872 REMARK 3 13 2.5899 - 2.5217 0.99 2661 141 0.1733 0.1991 REMARK 3 14 2.5217 - 2.4602 0.99 2652 143 0.1682 0.2193 REMARK 3 15 2.4602 - 2.4043 0.99 2633 148 0.1758 0.2193 REMARK 3 16 2.4043 - 2.3531 0.99 2644 151 0.1711 0.2184 REMARK 3 17 2.3531 - 2.3060 0.99 2639 133 0.1835 0.2455 REMARK 3 18 2.3060 - 2.2625 0.99 2660 136 0.1812 0.2073 REMARK 3 19 2.2625 - 2.2221 0.99 2651 119 0.1829 0.2411 REMARK 3 20 2.2221 - 2.1845 0.99 2652 128 0.1884 0.2097 REMARK 3 21 2.1845 - 2.1492 0.99 2646 136 0.1930 0.2341 REMARK 3 22 2.1492 - 2.1162 0.99 2652 129 0.1970 0.2658 REMARK 3 23 2.1162 - 2.0850 0.99 2590 167 0.2038 0.2504 REMARK 3 24 2.0850 - 2.0557 0.99 2610 154 0.2031 0.2635 REMARK 3 25 2.0557 - 2.0279 0.99 2608 116 0.2205 0.2697 REMARK 3 26 2.0279 - 2.0015 0.99 2656 161 0.2242 0.2937 REMARK 3 27 2.0015 - 1.9765 0.98 2629 127 0.2345 0.3234 REMARK 3 28 1.9765 - 1.9527 0.98 2605 134 0.2427 0.3067 REMARK 3 29 1.9527 - 1.9300 0.98 2578 155 0.2656 0.3203 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ALR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292111615. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81042 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 49.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5NM5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS METHANE PH 5.5, 0.20 REMARK 280 AMMONIUM SULFATE, 18-22% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.64600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 39 REMARK 465 LYS A 40 REMARK 465 THR A 41 REMARK 465 ILE A 42 REMARK 465 GLY A 43 REMARK 465 GLY A 44 REMARK 465 GLY A 45 REMARK 465 ASP A 46 REMARK 465 THR A 349 REMARK 465 GLY A 436 REMARK 465 VAL A 437 REMARK 465 ASP A 438 REMARK 465 SER A 439 REMARK 465 VAL A 440 REMARK 465 GLU A 441 REMARK 465 GLY A 442 REMARK 465 GLU A 443 REMARK 465 GLY A 444 REMARK 465 GLU A 445 REMARK 465 GLU A 446 REMARK 465 GLU A 447 REMARK 465 GLY A 448 REMARK 465 GLU A 449 REMARK 465 GLU A 450 REMARK 465 TYR A 451 REMARK 465 MET B 1 REMARK 465 GLN B 282 REMARK 465 TYR B 283 REMARK 465 GLU B 442 REMARK 465 GLU B 443 REMARK 465 GLY B 444 REMARK 465 GLU B 445 REMARK 465 MET B 446 REMARK 465 TYR B 447 REMARK 465 GLU B 448 REMARK 465 ASP B 449 REMARK 465 ASP B 450 REMARK 465 GLU B 451 REMARK 465 GLU B 452 REMARK 465 GLU B 453 REMARK 465 SER B 454 REMARK 465 GLU B 455 REMARK 465 ALA B 456 REMARK 465 GLN B 457 REMARK 465 GLY B 458 REMARK 465 PRO B 459 REMARK 465 LYS B 460 REMARK 465 MET F -10 REMARK 465 LYS F -9 REMARK 465 LYS F -8 REMARK 465 ASN F -7 REMARK 465 HIS F -6 REMARK 465 HIS F -5 REMARK 465 HIS F -4 REMARK 465 HIS F -3 REMARK 465 HIS F -2 REMARK 465 HIS F -1 REMARK 465 GLY F 0 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 LEU F 3 REMARK 465 GLU F 4 REMARK 465 VAL F 5 REMARK 465 LEU F 6 REMARK 465 PHE F 7 REMARK 465 GLN F 8 REMARK 465 GLY F 9 REMARK 465 PRO F 10 REMARK 465 GLY F 11 REMARK 465 SER F 12 REMARK 465 LEU F 168 REMARK 465 ASN F 169 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 60 O HOH A 603 1.58 REMARK 500 OD2 ASP B 251 O HOH B 601 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 98 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 109 -75.04 -92.43 REMARK 500 ASP A 245 96.42 -67.69 REMARK 500 LYS A 280 67.83 -103.41 REMARK 500 PHE A 404 -2.19 68.14 REMARK 500 SER B 58 53.83 72.24 REMARK 500 THR B 109 -101.59 -110.55 REMARK 500 CYS B 131 87.55 -156.52 REMARK 500 ASP F 44 -168.38 -79.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH F 679 DISTANCE = 5.92 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GLY A 501 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GTP A 502 O1G REMARK 620 2 GTP A 502 O2B 87.4 REMARK 620 3 HOH A 619 O 90.9 87.5 REMARK 620 4 HOH A 626 O 175.1 95.3 85.1 REMARK 620 5 HOH A 693 O 86.8 171.7 98.5 90.9 REMARK 620 6 HOH A 733 O 87.6 87.1 174.5 96.6 86.7 REMARK 620 N 1 2 3 4 5 DBREF 7ALR A 1 451 UNP P81947 TBA1B_BOVIN 1 451 DBREF 7ALR B 1 460 UNP Q2T9S0 TBB3_BOVIN 1 450 DBREF 7ALR F -10 169 PDB 7ALR 7ALR -10 169 SEQRES 1 A 451 MET ARG GLU CYS ILE SER ILE HIS VAL GLY GLN ALA GLY SEQRES 2 A 451 VAL GLN ILE GLY ASN ALA CYS TRP GLU LEU TYR CYS LEU SEQRES 3 A 451 GLU HIS GLY ILE GLN PRO ASP GLY GLN MET PRO SER ASP SEQRES 4 A 451 LYS THR ILE GLY GLY GLY ASP ASP SER PHE ASN THR PHE SEQRES 5 A 451 PHE SER GLU THR GLY ALA GLY LYS HIS VAL PRO ARG ALA SEQRES 6 A 451 VAL PHE VAL ASP LEU GLU PRO THR VAL ILE ASP GLU VAL SEQRES 7 A 451 ARG THR GLY THR TYR ARG GLN LEU PHE HIS PRO GLU GLN SEQRES 8 A 451 LEU ILE THR GLY LYS GLU ASP ALA ALA ASN ASN TYR ALA SEQRES 9 A 451 ARG GLY HIS TYR THR ILE GLY LYS GLU ILE ILE ASP LEU SEQRES 10 A 451 VAL LEU ASP ARG ILE ARG LYS LEU ALA ASP GLN CYS THR SEQRES 11 A 451 GLY LEU GLN GLY PHE LEU VAL PHE HIS SER PHE GLY GLY SEQRES 12 A 451 GLY THR GLY SER GLY PHE THR SER LEU LEU MET GLU ARG SEQRES 13 A 451 LEU SER VAL ASP TYR GLY LYS LYS SER LYS LEU GLU PHE SEQRES 14 A 451 SER ILE TYR PRO ALA PRO GLN VAL SER THR ALA VAL VAL SEQRES 15 A 451 GLU PRO TYR ASN SER ILE LEU THR THR HIS THR THR LEU SEQRES 16 A 451 GLU HIS SER ASP CYS ALA PHE MET VAL ASP ASN GLU ALA SEQRES 17 A 451 ILE TYR ASP ILE CYS ARG ARG ASN LEU ASP ILE GLU ARG SEQRES 18 A 451 PRO THR TYR THR ASN LEU ASN ARG LEU ILE SER GLN ILE SEQRES 19 A 451 VAL SER SER ILE THR ALA SER LEU ARG PHE ASP GLY ALA SEQRES 20 A 451 LEU ASN VAL ASP LEU THR GLU PHE GLN THR ASN LEU VAL SEQRES 21 A 451 PRO TYR PRO ARG ILE HIS PHE PRO LEU ALA THR TYR ALA SEQRES 22 A 451 PRO VAL ILE SER ALA GLU LYS ALA TYR HIS GLU GLN LEU SEQRES 23 A 451 SER VAL ALA GLU ILE THR ASN ALA CYS PHE GLU PRO ALA SEQRES 24 A 451 ASN GLN MET VAL LYS CYS ASP PRO ARG HIS GLY LYS TYR SEQRES 25 A 451 MET ALA CYS CYS LEU LEU TYR ARG GLY ASP VAL VAL PRO SEQRES 26 A 451 LYS ASP VAL ASN ALA ALA ILE ALA THR ILE LYS THR LYS SEQRES 27 A 451 ARG SER ILE GLN PHE VAL ASP TRP CYS PRO THR GLY PHE SEQRES 28 A 451 LYS VAL GLY ILE ASN TYR GLN PRO PRO THR VAL VAL PRO SEQRES 29 A 451 GLY GLY ASP LEU ALA LYS VAL GLN ARG ALA VAL CYS MET SEQRES 30 A 451 LEU SER ASN THR THR ALA ILE ALA GLU ALA TRP ALA ARG SEQRES 31 A 451 LEU ASP HIS LYS PHE ASP LEU MET TYR ALA LYS ARG ALA SEQRES 32 A 451 PHE VAL HIS TRP TYR VAL GLY GLU GLY MET GLU GLU GLY SEQRES 33 A 451 GLU PHE SER GLU ALA ARG GLU ASP MET ALA ALA LEU GLU SEQRES 34 A 451 LYS ASP TYR GLU GLU VAL GLY VAL ASP SER VAL GLU GLY SEQRES 35 A 451 GLU GLY GLU GLU GLU GLY GLU GLU TYR SEQRES 1 B 450 MET ARG GLU ILE VAL HIS ILE GLN ALA GLY GLN CYS GLY SEQRES 2 B 450 ASN GLN ILE GLY ALA LYS PHE TRP GLU VAL ILE SER ASP SEQRES 3 B 450 GLU HIS GLY ILE ASP PRO SER GLY ASN TYR VAL GLY ASP SEQRES 4 B 450 SER ASP LEU GLN LEU GLU ARG ILE SER VAL TYR TYR ASN SEQRES 5 B 450 GLU ALA SER SER HIS LYS TYR VAL PRO ARG ALA ILE LEU SEQRES 6 B 450 VAL ASP LEU GLU PRO GLY THR MET ASP SER VAL ARG SER SEQRES 7 B 450 GLY ALA PHE GLY HIS LEU PHE ARG PRO ASP ASN PHE ILE SEQRES 8 B 450 PHE GLY GLN SER GLY ALA GLY ASN ASN TRP ALA LYS GLY SEQRES 9 B 450 HIS TYR THR GLU GLY ALA GLU LEU VAL ASP SER VAL LEU SEQRES 10 B 450 ASP VAL VAL ARG LYS GLU CYS GLU ASN CYS ASP CYS LEU SEQRES 11 B 450 GLN GLY PHE GLN LEU THR HIS SER LEU GLY GLY GLY THR SEQRES 12 B 450 GLY SER GLY MET GLY THR LEU LEU ILE SER LYS VAL ARG SEQRES 13 B 450 GLU GLU TYR PRO ASP ARG ILE MET ASN THR PHE SER VAL SEQRES 14 B 450 VAL PRO SER PRO LYS VAL SER ASP THR VAL VAL GLU PRO SEQRES 15 B 450 TYR ASN ALA THR LEU SER ILE HIS GLN LEU VAL GLU ASN SEQRES 16 B 450 THR ASP GLU THR TYR CYS ILE ASP ASN GLU ALA LEU TYR SEQRES 17 B 450 ASP ILE CYS PHE ARG THR LEU LYS LEU ALA THR PRO THR SEQRES 18 B 450 TYR GLY ASP LEU ASN HIS LEU VAL SER ALA THR MET SER SEQRES 19 B 450 GLY VAL THR THR SER LEU ARG PHE PRO GLY GLN LEU ASN SEQRES 20 B 450 ALA ASP LEU ARG LYS LEU ALA VAL ASN MET VAL PRO PHE SEQRES 21 B 450 PRO ARG LEU HIS PHE PHE MET PRO GLY PHE ALA PRO LEU SEQRES 22 B 450 THR ALA ARG GLY SER GLN GLN TYR ARG ALA LEU THR VAL SEQRES 23 B 450 PRO GLU LEU THR GLN GLN MET PHE ASP ALA LYS ASN MET SEQRES 24 B 450 MET ALA ALA CYS ASP PRO ARG HIS GLY ARG TYR LEU THR SEQRES 25 B 450 VAL ALA THR VAL PHE ARG GLY ARG MET SER MET LYS GLU SEQRES 26 B 450 VAL ASP GLU GLN MET LEU ALA ILE GLN SER LYS ASN SER SEQRES 27 B 450 SER TYR PHE VAL GLU TRP ILE PRO ASN ASN VAL LYS VAL SEQRES 28 B 450 ALA VAL CYS ASP ILE PRO PRO ARG GLY LEU LYS MET SER SEQRES 29 B 450 SER THR PHE ILE GLY ASN SER THR ALA ILE GLN GLU LEU SEQRES 30 B 450 PHE LYS ARG ILE SER GLU GLN PHE THR ALA MET PHE ARG SEQRES 31 B 450 ARG LYS ALA PHE LEU HIS TRP TYR THR GLY GLU GLY MET SEQRES 32 B 450 ASP GLU MET GLU PHE THR GLU ALA GLU SER ASN MET ASN SEQRES 33 B 450 ASP LEU VAL SER GLU TYR GLN GLN TYR GLN ASP ALA THR SEQRES 34 B 450 ALA GLU GLU GLU GLY GLU MET TYR GLU ASP ASP GLU GLU SEQRES 35 B 450 GLU SER GLU ALA GLN GLY PRO LYS SEQRES 1 F 180 MET LYS LYS ASN HIS HIS HIS HIS HIS HIS GLY SER GLY SEQRES 2 F 180 LEU GLU VAL LEU PHE GLN GLY PRO GLY SER ASP LEU GLY SEQRES 3 F 180 LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN ASP ASP SEQRES 4 F 180 GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP VAL ASN SEQRES 5 F 180 ALA THR ASP ALA SER GLY LEU THR PRO LEU HIS LEU ALA SEQRES 6 F 180 ALA THR TYR GLY HIS LEU GLU ILE VAL GLU VAL LEU LEU SEQRES 7 F 180 LYS HIS GLY ALA ASP VAL ASN ALA ILE ASP ILE MET GLY SEQRES 8 F 180 SER THR PRO LEU HIS LEU ALA ALA LEU ILE GLY HIS LEU SEQRES 9 F 180 GLU ILE VAL GLU VAL LEU LEU LYS HIS GLY ALA ASP VAL SEQRES 10 F 180 ASN ALA VAL ASP THR TRP GLY ASP THR PRO LEU HIS LEU SEQRES 11 F 180 ALA ALA ILE MET GLY HIS LEU GLU ILE VAL GLU VAL LEU SEQRES 12 F 180 LEU LYS HIS GLY ALA ASP VAL ASN ALA GLN ASP LYS PHE SEQRES 13 F 180 GLY LYS THR ALA PHE ASP ILE SER ILE ASP ASN GLY ASN SEQRES 14 F 180 GLU ASP LEU ALA GLU ILE LEU GLN LYS LEU ASN HET GLY A 501 6 HET GTP A 502 41 HET MG A 503 1 HET RQK A 504 63 HET SO4 A 505 5 HET SO4 A 506 5 HET GDP B 500 38 HET GOL B 501 14 HET GOL B 502 14 HET GOL F 500 14 HETNAM GLY GLYCINE HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM RQK (2~{R})-2-OXIDANYL-2-[(6~{S},9~{S},12~{S},15~{S}, HETNAM 2 RQK 17~{S})-6,10,12,17-TETRAMETHYL-3-METHYLIDENE-7- HETNAM 3 RQK OXIDANYL-2,5,8,11,14-PENTAKIS(OXIDANYLIDENE)-13-OXA-1, HETNAM 4 RQK 4,7,10-TETRAZABICYCLO[13.3.0]OCTADECAN-9-YL]ETHANAMIDE HETNAM SO4 SULFATE ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GLY C2 H5 N O2 FORMUL 5 GTP C10 H16 N5 O14 P3 FORMUL 6 MG MG 2+ FORMUL 7 RQK C20 H29 N5 O9 FORMUL 8 SO4 2(O4 S 2-) FORMUL 10 GDP C10 H15 N5 O11 P2 FORMUL 11 GOL 3(C3 H8 O3) FORMUL 14 HOH *384(H2 O) HELIX 1 AA1 GLY A 10 HIS A 28 1 19 HELIX 2 AA2 ASP A 47 THR A 51 5 5 HELIX 3 AA3 PRO A 72 GLY A 81 1 10 HELIX 4 AA4 HIS A 88 GLU A 90 5 3 HELIX 5 AA5 ASN A 102 TYR A 108 1 7 HELIX 6 AA6 THR A 109 GLU A 113 5 5 HELIX 7 AA7 ILE A 114 GLN A 128 1 15 HELIX 8 AA8 GLY A 143 TYR A 161 1 19 HELIX 9 AA9 ALA A 174 SER A 178 5 5 HELIX 10 AB1 VAL A 182 LEU A 195 1 14 HELIX 11 AB2 GLU A 196 SER A 198 5 3 HELIX 12 AB3 ASN A 206 LEU A 217 1 12 HELIX 13 AB4 THR A 223 PHE A 244 1 22 HELIX 14 AB5 ASP A 251 VAL A 260 1 10 HELIX 15 AB6 SER A 287 CYS A 295 1 9 HELIX 16 AB7 PHE A 296 GLN A 301 5 6 HELIX 17 AB8 ASP A 306 GLY A 310 5 5 HELIX 18 AB9 VAL A 324 THR A 337 1 14 HELIX 19 AC1 ILE A 384 ALA A 400 1 17 HELIX 20 AC2 PHE A 404 GLY A 410 1 7 HELIX 21 AC3 GLU A 415 VAL A 435 1 21 HELIX 22 AC4 GLY B 10 GLY B 29 1 20 HELIX 23 AC5 ASP B 41 ARG B 48 1 6 HELIX 24 AC6 ILE B 49 VAL B 51 5 3 HELIX 25 AC7 PRO B 72 GLY B 81 1 10 HELIX 26 AC8 ARG B 88 ASP B 90 5 3 HELIX 27 AC9 ASN B 102 THR B 109 1 8 HELIX 28 AD1 THR B 109 ASN B 128 1 20 HELIX 29 AD2 GLY B 144 TYR B 161 1 18 HELIX 30 AD3 VAL B 182 THR B 198 1 17 HELIX 31 AD4 ASN B 206 THR B 216 1 11 HELIX 32 AD5 THR B 223 PHE B 244 1 22 HELIX 33 AD6 ASP B 251 VAL B 260 1 10 HELIX 34 AD7 THR B 287 ASP B 297 1 11 HELIX 35 AD8 ALA B 298 MET B 301 5 4 HELIX 36 AD9 ASP B 306 GLY B 310 5 5 HELIX 37 AE1 SER B 324 ASN B 339 1 16 HELIX 38 AE2 SER B 340 PHE B 343 5 4 HELIX 39 AE3 ILE B 384 ARG B 401 1 18 HELIX 40 AE4 LEU B 405 GLY B 410 1 6 HELIX 41 AE5 ASP B 414 ALA B 438 1 25 HELIX 42 AE6 LEU F 14 GLY F 25 1 12 HELIX 43 AE7 GLN F 26 ASN F 36 1 11 HELIX 44 AE8 THR F 49 GLY F 58 1 10 HELIX 45 AE9 HIS F 59 HIS F 69 1 11 HELIX 46 AF1 THR F 82 GLY F 91 1 10 HELIX 47 AF2 HIS F 92 HIS F 102 1 11 HELIX 48 AF3 THR F 115 MET F 123 1 9 HELIX 49 AF4 HIS F 125 HIS F 135 1 11 HELIX 50 AF5 THR F 148 ASN F 156 1 9 HELIX 51 AF6 ASN F 158 LYS F 167 1 10 SHEET 1 AA1 6 LEU A 92 THR A 94 0 SHEET 2 AA1 6 ALA A 65 ASP A 69 1 N PHE A 67 O ILE A 93 SHEET 3 AA1 6 CYS A 4 VAL A 9 1 N HIS A 8 O VAL A 68 SHEET 4 AA1 6 GLY A 134 SER A 140 1 O LEU A 136 N ILE A 7 SHEET 5 AA1 6 SER A 165 TYR A 172 1 O LEU A 167 N VAL A 137 SHEET 6 AA1 6 CYS A 200 ASP A 205 1 O PHE A 202 N GLU A 168 SHEET 1 AA2 2 PHE A 53 GLU A 55 0 SHEET 2 AA2 2 HIS A 61 PRO A 63 -1 O VAL A 62 N SER A 54 SHEET 1 AA3 4 LEU A 269 ALA A 273 0 SHEET 2 AA3 4 ARG A 373 THR A 381 -1 O SER A 379 N LEU A 269 SHEET 3 AA3 4 TYR A 312 GLY A 321 -1 N MET A 313 O ASN A 380 SHEET 4 AA3 4 LYS A 352 ASN A 356 1 O GLY A 354 N TYR A 319 SHEET 1 AA410 PHE B 92 PHE B 94 0 SHEET 2 AA410 ALA B 65 ASP B 69 1 N LEU B 67 O ILE B 93 SHEET 3 AA410 GLU B 3 ALA B 9 1 N GLN B 8 O VAL B 68 SHEET 4 AA410 LEU B 132 SER B 140 1 O GLN B 133 N GLU B 3 SHEET 5 AA410 ILE B 165 VAL B 172 1 O ILE B 165 N PHE B 135 SHEET 6 AA410 GLU B 200 ASP B 205 1 O TYR B 202 N THR B 168 SHEET 7 AA410 PHE B 267 ALA B 273 1 O PHE B 268 N THR B 201 SHEET 8 AA410 SER B 374 SER B 381 -1 O PHE B 377 N GLY B 271 SHEET 9 AA410 TYR B 312 ARG B 320 -1 N ARG B 320 O SER B 374 SHEET 10 AA410 VAL B 351 CYS B 356 1 O CYS B 356 N PHE B 319 SHEET 1 AA5 2 TYR B 53 GLU B 55 0 SHEET 2 AA5 2 TYR B 61 PRO B 63 -1 O VAL B 62 N ASN B 54 LINK O1G GTP A 502 MG MG A 503 1555 1555 2.21 LINK O2B GTP A 502 MG MG A 503 1555 1555 2.13 LINK MG MG A 503 O HOH A 619 1555 1555 2.07 LINK MG MG A 503 O HOH A 626 1555 1555 2.10 LINK MG MG A 503 O HOH A 693 1555 1555 2.15 LINK MG MG A 503 O HOH A 733 1555 1555 2.14 CISPEP 1 ALA A 273 PRO A 274 0 -1.44 CISPEP 2 ALA B 273 PRO B 274 0 -6.53 CRYST1 73.462 91.292 82.970 90.00 97.44 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013612 0.000000 0.001777 0.00000 SCALE2 0.000000 0.010954 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012155 0.00000