HEADER DE NOVO PROTEIN 26-OCT-20 7ARR TITLE THE DE NOVO DESIGNED HYBRID ALPHA/BETA-MINIPROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA/BETA-PEPTIDE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS ALPHA/BETA-PEPTIDE, FOLDAMER, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.BEJGER,P.FORTUNA,M.DREWNIAK-SWITALSKA,W.RYPNIEWSKI,L.BERLICKI REVDAT 2 01-MAY-24 7ARR 1 REMARK REVDAT 1 14-JUL-21 7ARR 0 JRNL AUTH M.BEJGER,P.FORTUNA,M.DREWNIAK-SWITALSKA,J.PLEWKA, JRNL AUTH 2 W.RYPNIEWSKI,L.BERLICKI JRNL TITL A COMPUTATIONALLY DESIGNED BETA-AMINO ACID-CONTAINING JRNL TITL 2 MINIPROTEIN. JRNL REF CHEM.COMMUN.(CAMB.) V. 57 6015 2021 JRNL REFN ESSN 1364-548X JRNL PMID 34032224 JRNL DOI 10.1039/D1CC02192C REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.5 REMARK 3 NUMBER OF REFLECTIONS : 48389 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.129 REMARK 3 FREE R VALUE : 0.161 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 998 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3123 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 76.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.2090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1110 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 298 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.32000 REMARK 3 B22 (A**2) : 0.37000 REMARK 3 B33 (A**2) : 0.43000 REMARK 3 B12 (A**2) : 0.69000 REMARK 3 B13 (A**2) : -0.63000 REMARK 3 B23 (A**2) : -0.82000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.032 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.034 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.024 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.174 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.982 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.975 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1283 ; 0.024 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 1218 ; 0.003 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1714 ; 2.762 ; 1.789 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2919 ; 1.643 ; 1.740 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 130 ; 5.807 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 63 ;31.246 ;25.873 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 256 ;11.278 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;18.512 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 182 ; 0.152 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1255 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 198 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2493 ;10.584 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7ARR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1292106682. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49390 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.3 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.02700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.14000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.340 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NOT DEPOSITED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE HEXAHYDRATE REMARK 280 0.1 M HEPES PH 7.5 25 % W/V PEG 3350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR C 34 REMARK 465 LEU C 35 REMARK 465 TYR D 34 REMARK 465 LEU D 35 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 3 CD GLU A 3 OE1 -0.073 REMARK 500 GLU B 15 CD GLU B 15 OE1 -0.153 REMARK 500 GLU B 15 CD GLU B 15 OE1 0.112 REMARK 500 GLU B 23 CD GLU B 23 OE1 -0.071 REMARK 500 SER C 14 CB SER C 14 OG 0.090 REMARK 500 GLU C 15 CD GLU C 15 OE2 0.073 REMARK 500 GLU D 3 CD GLU D 3 OE2 -0.075 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 XCP A 28 C - N - CA ANGL. DEV. = 16.3 DEGREES REMARK 500 ARG B 8 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 8 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR D 32 -7.06 -146.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 23 XCP A 24 134.07 REMARK 500 LYS A 27 XCP A 28 135.22 REMARK 500 GLU A 30 XCP A 31 135.26 REMARK 500 GLU B 23 XCP B 24 131.49 REMARK 500 LYS B 27 XCP B 28 140.50 REMARK 500 GLU B 30 XCP B 31 135.63 REMARK 500 GLU C 23 XCP C 24 135.70 REMARK 500 LYS C 27 XCP C 28 139.90 REMARK 500 GLU C 30 XCP C 31 133.80 REMARK 500 GLU D 23 XCP D 24 134.53 REMARK 500 LYS D 27 XCP D 28 137.46 REMARK 500 GLU D 30 XCP D 31 130.40 REMARK 500 GLU D 30 XCP D 31 141.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 286 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH D 264 DISTANCE = 6.09 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 102 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 OE2 REMARK 620 2 HOH A 205 O 89.4 REMARK 620 3 HOH A 250 O 88.3 92.8 REMARK 620 4 HOH A 254 O 90.2 89.1 177.6 REMARK 620 5 HOH A 258 O 92.5 177.8 88.4 89.8 REMARK 620 6 HOH A 272 O 176.7 87.3 92.1 89.5 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 260 O REMARK 620 2 HOH C 161 O 96.5 REMARK 620 3 HOH D 210 O 89.9 88.9 REMARK 620 4 HOH D 244 O 90.2 172.3 95.0 REMARK 620 5 HOH D 254 O 171.1 85.4 81.5 88.6 REMARK 620 6 HOH D 263 O 84.6 105.3 165.2 71.4 103.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 22 OE2 REMARK 620 2 HOH B 206 O 93.1 REMARK 620 3 HOH B 239 O 88.0 87.8 REMARK 620 4 HOH B 254 O 90.9 176.0 92.0 REMARK 620 5 HOH B 273 O 172.7 84.0 85.2 92.0 REMARK 620 6 HOH C 129 O 77.7 87.5 164.7 93.7 108.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 117 O REMARK 620 2 HOH C 119 O 80.1 REMARK 620 3 HOH C 161 O 103.6 81.8 REMARK 620 4 HOH D 210 O 87.2 134.3 143.8 REMARK 620 5 HOH D 254 O 174.8 102.6 81.2 87.7 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7ARS RELATED DB: PDB DBREF 7ARR A 1 35 PDB 7ARR 7ARR 1 35 DBREF 7ARR B 1 35 PDB 7ARR 7ARR 1 35 DBREF 7ARR C 1 35 PDB 7ARR 7ARR 1 35 DBREF 7ARR D 1 35 PDB 7ARR 7ARR 1 35 SEQRES 1 A 35 LEU SER GLU GLU GLU ILE GLN ARG ILE PHE GLY LEU SER SEQRES 2 A 35 SER GLU GLN ILE LYS SER LEU PRO GLU GLU XCP TYR LYS SEQRES 3 A 35 LYS XCP VAL GLU XCP THR GLY TYR LEU SEQRES 1 B 35 LEU SER GLU GLU GLU ILE GLN ARG ILE PHE GLY LEU SER SEQRES 2 B 35 SER GLU GLN ILE LYS SER LEU PRO GLU GLU XCP TYR LYS SEQRES 3 B 35 LYS XCP VAL GLU XCP THR GLY TYR LEU SEQRES 1 C 35 LEU SER GLU GLU GLU ILE GLN ARG ILE PHE GLY LEU SER SEQRES 2 C 35 SER GLU GLN ILE LYS SER LEU PRO GLU GLU XCP TYR LYS SEQRES 3 C 35 LYS XCP VAL GLU XCP THR GLY TYR LEU SEQRES 1 D 35 LEU SER GLU GLU GLU ILE GLN ARG ILE PHE GLY LEU SER SEQRES 2 D 35 SER GLU GLN ILE LYS SER LEU PRO GLU GLU XCP TYR LYS SEQRES 3 D 35 LYS XCP VAL GLU XCP THR GLY TYR LEU HET XCP A 24 8 HET XCP A 28 8 HET XCP A 31 8 HET XCP B 24 8 HET XCP B 28 8 HET XCP B 31 8 HET XCP C 24 8 HET XCP C 28 8 HET XCP C 31 8 HET XCP D 24 8 HET XCP D 28 8 HET XCP D 31 16 HET TFA A 101 14 HET MG A 102 1 HET MG B 101 1 HET MG D 101 2 HET CL D 102 1 HETNAM XCP (1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID HETNAM TFA TRIFLUOROACETIC ACID HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 1 XCP 12(C6 H11 N O2) FORMUL 5 TFA C2 H F3 O2 FORMUL 6 MG 3(MG 2+) FORMUL 9 CL CL 1- FORMUL 10 HOH *298(H2 O) HELIX 1 AA1 SER A 2 PHE A 10 1 9 HELIX 2 AA2 GLU A 15 LYS A 18 5 4 HELIX 3 AA3 SER A 19 GLY A 33 1 15 HELIX 4 AA4 SER B 2 GLY B 11 1 10 HELIX 5 AA5 GLU B 15 LYS B 18 5 4 HELIX 6 AA6 SER B 19 GLY B 33 1 15 HELIX 7 AA7 SER C 2 GLY C 11 1 10 HELIX 8 AA8 SER C 13 LYS C 18 1 6 HELIX 9 AA9 SER C 19 GLY C 33 1 15 HELIX 10 AB1 SER D 2 GLY D 11 1 10 HELIX 11 AB2 GLU D 15 LYS D 18 5 4 HELIX 12 AB3 SER D 19 GLU D 30 1 12 LINK C GLU A 23 N XCP A 24 1555 1555 1.30 LINK C XCP A 24 N TYR A 25 1555 1555 1.37 LINK C LYS A 27 N XCP A 28 1555 1555 1.38 LINK C XCP A 28 N VAL A 29 1555 1555 1.32 LINK C GLU A 30 N XCP A 31 1555 1555 1.31 LINK C XCP A 31 N THR A 32 1555 1555 1.33 LINK C GLU B 23 N XCP B 24 1555 1555 1.37 LINK C XCP B 24 N TYR B 25 1555 1555 1.36 LINK C LYS B 27 N XCP B 28 1555 1555 1.33 LINK C XCP B 28 N VAL B 29 1555 1555 1.42 LINK C GLU B 30 N XCP B 31 1555 1555 1.31 LINK C XCP B 31 N THR B 32 1555 1555 1.32 LINK C GLU C 23 N XCP C 24 1555 1555 1.31 LINK C XCP C 24 N TYR C 25 1555 1555 1.33 LINK C LYS C 27 N XCP C 28 1555 1555 1.35 LINK C XCP C 28 N VAL C 29 1555 1555 1.28 LINK C GLU C 30 N XCP C 31 1555 1555 1.27 LINK C XCP C 31 N THR C 32 1555 1555 1.29 LINK C GLU D 23 N XCP D 24 1555 1555 1.37 LINK C XCP D 24 N TYR D 25 1555 1555 1.40 LINK C LYS D 27 N XCP D 28 1555 1555 1.30 LINK C XCP D 28 N VAL D 29 1555 1555 1.32 LINK C AGLU D 30 N AXCP D 31 1555 1555 1.26 LINK C BGLU D 30 N BXCP D 31 1555 1555 1.31 LINK C AXCP D 31 N ATHR D 32 1555 1555 1.34 LINK C BXCP D 31 N BTHR D 32 1555 1555 1.34 LINK OE2 GLU A 22 MG MG A 102 1555 1555 2.13 LINK MG MG A 102 O HOH A 205 1555 1555 2.11 LINK MG MG A 102 O HOH A 250 1555 1555 2.12 LINK MG MG A 102 O HOH A 254 1555 1555 2.09 LINK MG MG A 102 O HOH A 258 1555 1555 2.14 LINK MG MG A 102 O HOH A 272 1555 1555 2.07 LINK O AHOH A 260 MG A MG D 101 1455 1555 2.12 LINK OE2AGLU B 22 MG MG B 101 1555 1555 2.02 LINK MG MG B 101 O HOH B 206 1555 1555 2.51 LINK MG MG B 101 O HOH B 239 1555 1555 2.13 LINK MG MG B 101 O HOH B 254 1555 1555 2.60 LINK MG MG B 101 O HOH B 273 1555 1555 2.20 LINK MG MG B 101 O HOH C 129 1555 1555 2.61 LINK O HOH C 117 MG B MG D 101 1555 1555 2.20 LINK O BHOH C 119 MG B MG D 101 1555 1555 2.34 LINK O HOH C 161 MG A MG D 101 1555 1555 2.41 LINK O HOH C 161 MG B MG D 101 1555 1555 1.97 LINK MG A MG D 101 O HOH D 210 1555 1555 2.61 LINK MG B MG D 101 O HOH D 210 1555 1555 1.72 LINK MG A MG D 101 O HOH D 244 1555 1555 2.74 LINK MG A MG D 101 O HOH D 254 1555 1555 1.92 LINK MG B MG D 101 O HOH D 254 1555 1555 2.52 LINK MG A MG D 101 O HOH D 263 1555 1555 1.80 CRYST1 30.937 32.068 43.087 114.16 91.88 109.86 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032324 0.011679 0.007026 0.00000 SCALE2 0.000000 0.033157 0.016580 0.00000 SCALE3 0.000000 0.000000 0.025963 0.00000