HEADER FLUORESCENT PROTEIN 05-NOV-20 7AVA TITLE SOLUTION STRUCTURE OF THE FLUOROGEN-ACTIVATING PROTEIN FAST IN COMPLEX TITLE 2 WITH THE LIGAND N871B COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAST; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS FLUOROGEN-ACTIVATING PROTEIN PAS DOMAIN, FLUORESCENT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.S.MINEEV,S.A.GONCHARUK,M.S.BARANOV REVDAT 3 14-JUN-23 7AVA 1 REMARK REVDAT 2 09-JUN-21 7AVA 1 JRNL REVDAT 1 28-APR-21 7AVA 0 JRNL AUTH K.S.MINEEV,S.A.GONCHARUK,M.V.GONCHARUK,N.V.POVAROVA, JRNL AUTH 2 A.I.SOKOLOV,N.S.BALEEVA,A.Y.SMIRNOV,I.N.MYASNYANKO, JRNL AUTH 3 D.A.RUCHKIN,S.BUKHDRUKER,A.REMEEVA,A.MISHIN,V.BORSHCHEVSKIY, JRNL AUTH 4 V.GORDELIY,A.S.ARSENIEV,D.A.GORBACHEV,A.S.GAVRIKOV, JRNL AUTH 5 A.S.MISHIN,M.S.BARANOV JRNL TITL NANOFAST: STRUCTURE-BASED DESIGN OF A SMALL JRNL TITL 2 FLUOROGEN-ACTIVATING PROTEIN WITH ONLY 98 AMINO ACIDS. JRNL REF CHEM SCI V. 12 6719 2021 JRNL REFN ISSN 2041-6520 JRNL PMID 34040747 JRNL DOI 10.1039/D1SC01454D REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.98.13 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AVA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112138. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 40 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.85 MM [U-13C; U-15N] FAST, REMARK 210 0.90 MM N87, 20 MM SODIUM REMARK 210 PHOSPHATE, 20 MM SODIUM CHLORIDE, REMARK 210 0.01 % SODIUM AZIDE, 95% H2O/5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-13C NOESY AROMATIC; 3D 1H REMARK 210 -15N NOESY; 3D HCCH-TOCSY; 3D REMARK 210 HNCO; 3D HNCACB; 3D HCCH-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA, QMDD, TALOS-N REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 19 -169.95 -103.34 REMARK 500 1 ALA A 67 85.14 -154.81 REMARK 500 1 ASP A 71 47.94 -88.75 REMARK 500 1 PHE A 75 -67.27 -107.30 REMARK 500 1 ASN A 87 71.53 -176.95 REMARK 500 1 LEU A 88 95.48 -64.02 REMARK 500 1 ASP A 116 36.61 -94.91 REMARK 500 2 ALA A 67 85.25 -154.94 REMARK 500 2 ASP A 71 48.26 -88.62 REMARK 500 2 PHE A 75 -67.13 -107.13 REMARK 500 2 ASN A 87 69.95 -178.16 REMARK 500 2 LEU A 88 95.30 -63.48 REMARK 500 2 ASP A 116 35.81 -95.49 REMARK 500 2 ALA A 128 109.83 -177.84 REMARK 500 2 ALA A 130 133.05 -178.16 REMARK 500 2 HIS A 134 122.41 -175.14 REMARK 500 3 ASP A 19 -169.71 -103.91 REMARK 500 3 ALA A 67 85.14 -154.87 REMARK 500 3 ASP A 71 48.12 -88.35 REMARK 500 3 PHE A 75 -67.33 -106.97 REMARK 500 3 ASN A 87 69.45 -175.30 REMARK 500 3 LEU A 88 95.31 -62.29 REMARK 500 3 ASP A 116 37.17 -96.96 REMARK 500 3 ALA A 130 98.98 61.52 REMARK 500 4 ALA A 67 84.93 -154.88 REMARK 500 4 ASP A 71 48.27 -88.37 REMARK 500 4 PHE A 75 -67.26 -108.61 REMARK 500 4 ASN A 87 73.40 -179.01 REMARK 500 4 LEU A 88 95.39 -64.24 REMARK 500 4 ASP A 116 35.40 -95.57 REMARK 500 4 HIS A 135 -70.81 -77.49 REMARK 500 5 ALA A 67 85.14 -154.92 REMARK 500 5 ASP A 71 47.80 -88.48 REMARK 500 5 PHE A 75 -67.36 -106.89 REMARK 500 5 ASN A 87 69.62 -177.42 REMARK 500 5 LEU A 88 95.17 -62.45 REMARK 500 5 ALA A 128 108.94 -167.66 REMARK 500 5 ALA A 129 176.78 -59.21 REMARK 500 5 HIS A 135 -73.75 -91.05 REMARK 500 6 ALA A 67 84.88 -154.64 REMARK 500 6 ASP A 71 48.38 -88.55 REMARK 500 6 PHE A 75 -67.75 -107.68 REMARK 500 6 ASN A 87 68.53 -174.17 REMARK 500 6 LEU A 88 95.95 -61.52 REMARK 500 6 ASP A 116 37.83 -97.69 REMARK 500 6 ALA A 128 145.16 -173.44 REMARK 500 6 LEU A 131 128.30 -173.87 REMARK 500 7 ALA A 67 85.19 -154.85 REMARK 500 7 ASP A 71 48.36 -88.58 REMARK 500 7 PHE A 75 -67.30 -108.07 REMARK 500 REMARK 500 THIS ENTRY HAS 159 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue S1Q A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34572 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF THE FLUOROGEN-ACTIVATING PROTEIN FAST IN REMARK 900 COMPLEX WITH THE LIGAND N871B DBREF 7AVA A 1 138 PDB 7AVA 7AVA 1 138 SEQRES 1 A 138 MET GLU HIS VAL ALA PHE GLY SER GLU ASP ILE GLU ASN SEQRES 2 A 138 THR LEU ALA LYS MET ASP ASP GLY GLN LEU ASP GLY LEU SEQRES 3 A 138 ALA PHE GLY ALA ILE GLN LEU ASP GLY ASP GLY ASN ILE SEQRES 4 A 138 LEU GLN TYR ASN ALA ALA GLU GLY ASP ILE THR GLY ARG SEQRES 5 A 138 ASP PRO LYS GLN VAL ILE GLY LYS ASN PHE PHE LYS ASP SEQRES 6 A 138 VAL ALA PRO GLY THR ASP SER PRO GLU PHE TYR GLY LYS SEQRES 7 A 138 PHE LYS GLU GLY VAL ALA SER GLY ASN LEU ASN THR MET SEQRES 8 A 138 PHE GLU TRP MET ILE PRO THR SER ARG GLY PRO THR LYS SEQRES 9 A 138 VAL LYS VAL HIS MET LYS LYS ALA LEU SER GLY ASP SER SEQRES 10 A 138 TYR TRP VAL PHE VAL LYS ARG VAL LYS LEU ALA ALA ALA SEQRES 11 A 138 LEU GLU HIS HIS HIS HIS HIS HIS HET S1Q A 201 41 HETNAM S1Q (5~{Z})-5-[(2-METHOXY-4-OXIDANYL-PHENYL)METHYLIDENE]-3- HETNAM 2 S1Q METHYL-2-[(~{E})-2-PYRIDIN-4-YLETHENYL]IMIDAZOL-4-ONE FORMUL 2 S1Q C19 H17 N3 O3 HELIX 1 AA1 ASP A 10 MET A 18 1 9 HELIX 2 AA2 ASP A 19 LEU A 26 1 8 HELIX 3 AA3 ASN A 43 GLY A 51 1 9 HELIX 4 AA4 ASP A 53 ILE A 58 1 6 HELIX 5 AA5 PHE A 75 GLY A 86 1 12 SHEET 1 AA1 5 ILE A 39 TYR A 42 0 SHEET 2 AA1 5 GLY A 29 LEU A 33 -1 N GLN A 32 O LEU A 40 SHEET 3 AA1 5 TYR A 118 ARG A 124 -1 O VAL A 122 N GLY A 29 SHEET 4 AA1 5 LYS A 104 LYS A 111 -1 N LYS A 106 O LYS A 123 SHEET 5 AA1 5 ASN A 89 MET A 95 -1 N PHE A 92 O VAL A 107 SITE 1 AC1 10 GLU A 46 THR A 50 PHE A 62 VAL A 66 SITE 2 AC1 10 PRO A 68 THR A 70 PHE A 75 TRP A 94 SITE 3 AC1 10 MET A 95 PRO A 97 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1