HEADER PROTEIN BINDING 06-NOV-20 7AVV TITLE CRYSTAL STRUCTURE OF SOS1 IN COMPLEX WITH COMPOUND 9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SON OF SEVENLESS HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SOS-1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SOS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RASGEF, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR G.BADER,D.KESSLER,B.WOLKERSTORFER REVDAT 3 31-JAN-24 7AVV 1 REMARK REVDAT 2 09-JUN-21 7AVV 1 JRNL REVDAT 1 24-MAR-21 7AVV 0 JRNL AUTH J.RAMHARTER,D.KESSLER,P.ETTMAYER,M.H.HOFMANN,T.GERSTBERGER, JRNL AUTH 2 M.GMACHL,T.WUNBERG,C.KOFINK,M.SANDERSON,H.ARNHOF,G.BADER, JRNL AUTH 3 K.RUMPEL,A.ZOPHEL,R.SCHNITZER,J.BOTTCHER,J.C.O'CONNELL, JRNL AUTH 4 R.L.MENDES,D.RICHARD,N.POTOTSCHNIG,I.WEINER,W.HELA,K.HAUER, JRNL AUTH 5 D.HAERING,L.LAMARRE,B.WOLKERSTORFER,C.SALAMON,P.WERNI, JRNL AUTH 6 S.MUNICO-MARTINEZ,R.MEYER,M.D.KENNEDY,N.KRAUT,D.B.MCCONNELL JRNL TITL ONE ATOM MAKES ALL THE DIFFERENCE: GETTING A FOOT IN THE JRNL TITL 2 DOOR BETWEEN SOS1 AND KRAS. JRNL REF J.MED.CHEM. V. 64 6569 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 33719426 JRNL DOI 10.1021/ACS.JMEDCHEM.0C01949 REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 84.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 84.8 REMARK 3 NUMBER OF REFLECTIONS : 25699 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1220 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 18.23 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2046 REMARK 3 BIN FREE R VALUE : 0.1948 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 21 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3696 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 306 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.00840 REMARK 3 B22 (A**2) : 0.44130 REMARK 3 B33 (A**2) : -0.43290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.290 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.321 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.218 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7566 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 13723 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2219 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1157 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3816 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 490 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6070 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.86 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.92 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.59 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 8.6171 -16.4045 -22.5749 REMARK 3 T TENSOR REMARK 3 T11: -0.0551 T22: -0.0448 REMARK 3 T33: -0.048 T12: 0.0123 REMARK 3 T13: 0.0099 T23: 0.016 REMARK 3 L TENSOR REMARK 3 L11: 0.0585 L22: 1.4062 REMARK 3 L33: 0.6293 L12: 0.0157 REMARK 3 L13: -0.0331 L23: 0.5163 REMARK 3 S TENSOR REMARK 3 S11: 0.0141 S12: 0.1158 S13: -0.0305 REMARK 3 S21: 0.1158 S22: -0.0066 S23: -0.0553 REMARK 3 S31: -0.0305 S32: -0.0553 S33: -0.0075 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7AVV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112185. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5-7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS, STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25699 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 84.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.8 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7AVI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6-11 % PEG 8000, 2 MM DTT, 60 MM TRIS, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.36000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.07800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.60550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.07800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.36000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.60550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 563 REMARK 465 GLU A 564 REMARK 465 GLU A 590 REMARK 465 ASN A 591 REMARK 465 MET A 592 REMARK 465 GLN A 593 REMARK 465 PRO A 594 REMARK 465 LYS A 595 REMARK 465 ALA A 596 REMARK 465 ASP A 659 REMARK 465 ARG A 660 REMARK 465 ILE A 661 REMARK 465 ALA A 662 REMARK 465 ILE A 663 REMARK 465 GLU A 664 REMARK 465 ASN A 665 REMARK 465 GLY A 666 REMARK 465 ASP A 667 REMARK 465 GLN A 668 REMARK 465 ARG A 744 REMARK 465 ASP A 745 REMARK 465 ASN A 746 REMARK 465 GLY A 747 REMARK 465 PRO A 748 REMARK 465 GLY A 749 REMARK 465 HIS A 750 REMARK 465 ASN A 751 REMARK 465 ILE A 752 REMARK 465 THR A 753 REMARK 465 TRP A 809 REMARK 465 THR A 810 REMARK 465 LYS A 811 REMARK 465 GLU A 812 REMARK 465 ASP A 813 REMARK 465 LYS A 814 REMARK 465 SER A 1043 REMARK 465 ASN A 1044 REMARK 465 PRO A 1045 REMARK 465 ARG A 1046 REMARK 465 PRO A 1047 REMARK 465 GLY A 1048 REMARK 465 THR A 1049 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 857 HG SER A 1037 1.51 REMARK 500 O CYS A 838 HG1 THR A 842 1.59 REMARK 500 HH TYR A 915 O HOH A 1212 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1469 O HOH A 1481 3654 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 585 -14.32 -140.42 REMARK 500 GLU A 657 -2.07 68.82 REMARK 500 TYR A 681 -57.62 -125.83 REMARK 500 HIS A 764 -105.26 -125.25 REMARK 500 SER A 807 -19.66 -154.50 REMARK 500 ILE A 816 -53.28 75.02 REMARK 500 ASN A1020 -55.65 -20.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1506 DISTANCE = 6.24 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue S2W A 1102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7AVI RELATED DB: PDB REMARK 900 RELATED ID: 7AVL RELATED DB: PDB REMARK 900 RELATED ID: 7AVS RELATED DB: PDB REMARK 900 RELATED ID: 7AVT RELATED DB: PDB REMARK 900 RELATED ID: 7AVU RELATED DB: PDB DBREF 7AVV A 564 1049 UNP Q07889 SOS1_HUMAN 564 1049 SEQADV 7AVV GLY A 563 UNP Q07889 EXPRESSION TAG SEQRES 1 A 487 GLY GLU GLU GLN MET ARG LEU PRO SER ALA ASP VAL TYR SEQRES 2 A 487 ARG PHE ALA GLU PRO ASP SER GLU GLU ASN ILE ILE PHE SEQRES 3 A 487 GLU GLU ASN MET GLN PRO LYS ALA GLY ILE PRO ILE ILE SEQRES 4 A 487 LYS ALA GLY THR VAL ILE LYS LEU ILE GLU ARG LEU THR SEQRES 5 A 487 TYR HIS MET TYR ALA ASP PRO ASN PHE VAL ARG THR PHE SEQRES 6 A 487 LEU THR THR TYR ARG SER PHE CYS LYS PRO GLN GLU LEU SEQRES 7 A 487 LEU SER LEU ILE ILE GLU ARG PHE GLU ILE PRO GLU PRO SEQRES 8 A 487 GLU PRO THR GLU ALA ASP ARG ILE ALA ILE GLU ASN GLY SEQRES 9 A 487 ASP GLN PRO LEU SER ALA GLU LEU LYS ARG PHE ARG LYS SEQRES 10 A 487 GLU TYR ILE GLN PRO VAL GLN LEU ARG VAL LEU ASN VAL SEQRES 11 A 487 CYS ARG HIS TRP VAL GLU HIS HIS PHE TYR ASP PHE GLU SEQRES 12 A 487 ARG ASP ALA TYR LEU LEU GLN ARG MET GLU GLU PHE ILE SEQRES 13 A 487 GLY THR VAL ARG GLY LYS ALA MET LYS LYS TRP VAL GLU SEQRES 14 A 487 SER ILE THR LYS ILE ILE GLN ARG LYS LYS ILE ALA ARG SEQRES 15 A 487 ASP ASN GLY PRO GLY HIS ASN ILE THR PHE GLN SER SER SEQRES 16 A 487 PRO PRO THR VAL GLU TRP HIS ILE SER ARG PRO GLY HIS SEQRES 17 A 487 ILE GLU THR PHE ASP LEU LEU THR LEU HIS PRO ILE GLU SEQRES 18 A 487 ILE ALA ARG GLN LEU THR LEU LEU GLU SER ASP LEU TYR SEQRES 19 A 487 ARG ALA VAL GLN PRO SER GLU LEU VAL GLY SER VAL TRP SEQRES 20 A 487 THR LYS GLU ASP LYS GLU ILE ASN SER PRO ASN LEU LEU SEQRES 21 A 487 LYS MET ILE ARG HIS THR THR ASN LEU THR LEU TRP PHE SEQRES 22 A 487 GLU LYS CYS ILE VAL GLU THR GLU ASN LEU GLU GLU ARG SEQRES 23 A 487 VAL ALA VAL VAL SER ARG ILE ILE GLU ILE LEU GLN VAL SEQRES 24 A 487 PHE GLN GLU LEU ASN ASN PHE ASN GLY VAL LEU GLU VAL SEQRES 25 A 487 VAL SER ALA MET ASN SER SER PRO VAL TYR ARG LEU ASP SEQRES 26 A 487 HIS THR PHE GLU GLN ILE PRO SER ARG GLN LYS LYS ILE SEQRES 27 A 487 LEU GLU GLU ALA HIS GLU LEU SER GLU ASP HIS TYR LYS SEQRES 28 A 487 LYS TYR LEU ALA LYS LEU ARG SER ILE ASN PRO PRO CYS SEQRES 29 A 487 VAL PRO PHE PHE GLY ILE TYR LEU THR ASN ILE LEU LYS SEQRES 30 A 487 THR GLU GLU GLY ASN PRO GLU VAL LEU LYS ARG HIS GLY SEQRES 31 A 487 LYS GLU LEU ILE ASN PHE SER LYS ARG ARG LYS VAL ALA SEQRES 32 A 487 GLU ILE THR GLY GLU ILE GLN GLN TYR GLN ASN GLN PRO SEQRES 33 A 487 TYR CYS LEU ARG VAL GLU SER ASP ILE LYS ARG PHE PHE SEQRES 34 A 487 GLU ASN LEU ASN PRO MET GLY ASN SER MET GLU LYS GLU SEQRES 35 A 487 PHE THR ASP TYR LEU PHE ASN LYS SER LEU GLU ILE GLU SEQRES 36 A 487 PRO ARG ASN PRO LYS PRO LEU PRO ARG PHE PRO LYS LYS SEQRES 37 A 487 TYR SER TYR PRO LEU LYS SER PRO GLY VAL ARG PRO SER SEQRES 38 A 487 ASN PRO ARG PRO GLY THR HET IMD A1101 10 HET S2W A1102 42 HETNAM IMD IMIDAZOLE HETNAM S2W ~{N}-[(1~{R})-1-[3-AZANYL-5-(TRIFLUOROMETHYL) HETNAM 2 S2W PHENYL]ETHYL]-2-METHYL-QUINAZOLIN-4-AMINE FORMUL 2 IMD C3 H5 N2 1+ FORMUL 3 S2W C18 H17 F3 N4 FORMUL 4 HOH *306(H2 O) HELIX 1 AA1 TYR A 575 GLU A 579 5 5 HELIX 2 AA2 THR A 605 THR A 614 1 10 HELIX 3 AA3 ASP A 620 TYR A 631 1 12 HELIX 4 AA4 ARG A 632 PHE A 634 5 3 HELIX 5 AA5 LYS A 636 GLU A 649 1 14 HELIX 6 AA6 SER A 671 TYR A 681 1 11 HELIX 7 AA7 TYR A 681 HIS A 700 1 20 HELIX 8 AA8 PHE A 701 ARG A 706 1 6 HELIX 9 AA9 ASP A 707 THR A 720 1 14 HELIX 10 AB1 GLY A 723 ALA A 743 1 21 HELIX 11 AB2 HIS A 770 PHE A 774 5 5 HELIX 12 AB3 HIS A 780 VAL A 799 1 20 HELIX 13 AB4 GLN A 800 VAL A 805 5 6 HELIX 14 AB5 SER A 818 GLU A 841 1 24 HELIX 15 AB6 ASN A 844 LEU A 865 1 22 HELIX 16 AB7 ASN A 867 SER A 880 1 14 HELIX 17 AB8 SER A 880 ARG A 885 1 6 HELIX 18 AB9 LEU A 886 GLN A 892 1 7 HELIX 19 AC1 PRO A 894 LEU A 907 1 14 HELIX 20 AC2 SER A 908 ILE A 922 1 15 HELIX 21 AC3 PHE A 930 GLU A 942 1 13 HELIX 22 AC4 PHE A 958 GLY A 969 1 12 HELIX 23 AC5 GLU A 970 GLN A 975 5 6 HELIX 24 AC6 GLU A 984 ASN A 993 1 10 HELIX 25 AC7 MET A 1001 GLU A 1017 1 17 SHEET 1 AA1 4 ILE A 586 PHE A 588 0 SHEET 2 AA1 4 ILE A 601 GLY A 604 -1 O ALA A 603 N ILE A 587 SHEET 3 AA1 4 LYS A 953 ASN A 957 -1 O ILE A 956 N GLY A 604 SHEET 4 AA1 4 VAL A 947 ARG A 950 -1 N LEU A 948 O LEU A 955 CISPEP 1 PRO A 924 PRO A 925 0 4.51 SITE 1 AC1 3 TYR A 884 PHE A 890 S2W A1102 SITE 1 AC2 9 MET A 878 ASN A 879 TYR A 884 PHE A 890 SITE 2 AC2 9 LYS A 898 LEU A 901 GLU A 902 HIS A 905 SITE 3 AC2 9 IMD A1101 CRYST1 38.720 79.211 168.156 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025826 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005947 0.00000