HEADER OXIDOREDUCTASE 17-NOV-20 7AZR TITLE CRYSTAL STRUCTURE OF THE IRON/MANGANESE CAMBIALISTIC SUPEROXIDE TITLE 2 DISMUTASE FROM RHODOBACTER CAPSULATUS COMPLEX WITH MN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE [FE]; COMPND 3 CHAIN: A, E; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER CAPSULATUS; SOURCE 3 ORGANISM_TAXID: 1061; SOURCE 4 GENE: SODB, SOD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SUPEROXIDE OXIDOREDUCTASE, SODS, METAL ION BINDING PROTEIN., KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.PONCE-SALVATIERRA,J.A.HERMOSO REVDAT 2 31-JAN-24 7AZR 1 REMARK REVDAT 1 01-DEC-21 7AZR 0 JRNL AUTH A.PONCE-SALVATIERRA,C.DI CAPUA,J.GONZALEZ,N.CORTEZ, JRNL AUTH 2 J.A.HERMOSO JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE JRNL TITL 2 CAMBIALISTIC SUPEROXIDE DISMUTASE FROM RHODOBACTER JRNL TITL 3 CAPSULATUS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 33410 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1764 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2359 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 126 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3106 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : 0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.148 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.263 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3214 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2826 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4356 ; 1.282 ; 1.853 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6578 ; 1.163 ; 2.931 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 400 ; 6.028 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;34.024 ;25.065 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 510 ;11.892 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 6.794 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 442 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3674 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 684 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1599 ; 1.269 ; 1.757 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1598 ; 1.268 ; 1.757 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1999 ; 1.869 ; 2.628 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2000 ; 1.869 ; 2.628 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1613 ; 1.906 ; 1.919 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1613 ; 1.906 ; 1.919 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2356 ; 3.047 ; 2.798 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3728 ; 4.458 ;20.692 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3705 ; 4.392 ;20.511 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 2 E 200 REMARK 3 ORIGIN FOR THE GROUP (A): -50.8930 4.4760 -11.2150 REMARK 3 T TENSOR REMARK 3 T11: 0.0903 T22: 0.0822 REMARK 3 T33: 0.0798 T12: -0.0147 REMARK 3 T13: 0.0131 T23: 0.0531 REMARK 3 L TENSOR REMARK 3 L11: 0.6521 L22: 6.1862 REMARK 3 L33: 2.0437 L12: -0.8655 REMARK 3 L13: -0.1812 L23: 2.0683 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: 0.0491 S13: 0.1157 REMARK 3 S21: -0.6003 S22: 0.1724 S23: -0.0155 REMARK 3 S31: -0.3401 S32: 0.1041 S33: -0.1765 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 200 REMARK 3 ORIGIN FOR THE GROUP (A): -42.4460 -22.8790 -6.3400 REMARK 3 T TENSOR REMARK 3 T11: 0.1798 T22: 0.1559 REMARK 3 T33: 0.0541 T12: 0.1378 REMARK 3 T13: -0.0621 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 1.0852 L22: 6.1064 REMARK 3 L33: 2.1694 L12: -1.0986 REMARK 3 L13: -0.8478 L23: 2.7676 REMARK 3 S TENSOR REMARK 3 S11: -0.2715 S12: -0.0890 S13: 0.0103 REMARK 3 S21: 0.8753 S22: 0.5203 S23: -0.4441 REMARK 3 S31: 0.5474 S32: 0.4409 S33: -0.2488 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 7AZR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112355. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97909 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35121 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 45.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 34.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.540 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1DT0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 58% MPD, 200 MM CACL2, AND 100 MM REMARK 280 HEPES, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 81.32500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 81.32500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 11.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 81.32500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 81.32500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 81.32500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 81.32500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 11.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 81.32500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 81.32500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 22.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 149 -115.07 59.51 REMARK 500 ARG A 176 -126.99 51.52 REMARK 500 ASN E 149 -115.41 60.15 REMARK 500 ARG E 176 -127.66 51.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 28 NE2 REMARK 620 2 HIS A 82 NE2 93.3 REMARK 620 3 ASP A 165 OD2 83.8 107.1 REMARK 620 4 HIS A 169 NE2 94.4 134.0 118.8 REMARK 620 5 HOH A 434 O 171.1 85.6 88.0 92.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN E 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 28 NE2 REMARK 620 2 HIS E 82 NE2 92.3 REMARK 620 3 ASP E 165 OD2 85.0 108.3 REMARK 620 4 HIS E 169 NE2 92.8 132.6 119.1 REMARK 620 5 HOH E 440 O 173.1 90.6 88.2 89.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 94 OD1 REMARK 620 2 HOH E 401 O 59.4 REMARK 620 3 HOH E 437 O 74.5 98.9 REMARK 620 N 1 2 DBREF 7AZR A 2 200 UNP O30970 SODF_RHOCA 2 200 DBREF 7AZR E 2 200 UNP O30970 SODF_RHOCA 2 200 SEQRES 1 A 199 ALA PHE GLU LEU PRO ALA LEU PRO TYR ALA HIS ASP ALA SEQRES 2 A 199 LEU ALA SER LEU GLY MET SER LYS GLU THR LEU GLU TYR SEQRES 3 A 199 HIS HIS ASP LEU HIS HIS LYS ALA TYR VAL ASP ASN GLY SEQRES 4 A 199 ASN LYS LEU ILE ALA GLY THR GLU TRP GLU GLY LYS SER SEQRES 5 A 199 VAL GLU GLU ILE VAL LYS GLY THR TYR CYS ALA GLY ALA SEQRES 6 A 199 VAL ALA GLN SER GLY ILE PHE ASN ASN ALA SER GLN HIS SEQRES 7 A 199 TRP ASN HIS ALA GLN PHE TRP GLU MET MET GLY PRO GLY SEQRES 8 A 199 GLU ASP LYS LYS MET PRO GLY ALA LEU GLU LYS ALA LEU SEQRES 9 A 199 VAL GLU SER PHE GLY SER VAL ALA LYS PHE LYS GLU ASP SEQRES 10 A 199 PHE ALA ALA ALA GLY ALA GLY GLN PHE GLY SER GLY TRP SEQRES 11 A 199 ALA TRP LEU VAL LYS ASP SER ASP GLY ALA LEU LYS ILE SEQRES 12 A 199 THR LYS THR GLU ASN GLY VAL ASN PRO LEU CYS PHE GLY SEQRES 13 A 199 GLN THR ALA LEU LEU GLY CYS ASP VAL TRP GLU HIS SER SEQRES 14 A 199 TYR TYR ILE ASP PHE ARG ASN LYS ARG PRO ALA TYR LEU SEQRES 15 A 199 THR ASN PHE LEU ASP LYS LEU VAL ASN TRP GLU ASN VAL SEQRES 16 A 199 ALA SER ARG MET SEQRES 1 E 199 ALA PHE GLU LEU PRO ALA LEU PRO TYR ALA HIS ASP ALA SEQRES 2 E 199 LEU ALA SER LEU GLY MET SER LYS GLU THR LEU GLU TYR SEQRES 3 E 199 HIS HIS ASP LEU HIS HIS LYS ALA TYR VAL ASP ASN GLY SEQRES 4 E 199 ASN LYS LEU ILE ALA GLY THR GLU TRP GLU GLY LYS SER SEQRES 5 E 199 VAL GLU GLU ILE VAL LYS GLY THR TYR CYS ALA GLY ALA SEQRES 6 E 199 VAL ALA GLN SER GLY ILE PHE ASN ASN ALA SER GLN HIS SEQRES 7 E 199 TRP ASN HIS ALA GLN PHE TRP GLU MET MET GLY PRO GLY SEQRES 8 E 199 GLU ASP LYS LYS MET PRO GLY ALA LEU GLU LYS ALA LEU SEQRES 9 E 199 VAL GLU SER PHE GLY SER VAL ALA LYS PHE LYS GLU ASP SEQRES 10 E 199 PHE ALA ALA ALA GLY ALA GLY GLN PHE GLY SER GLY TRP SEQRES 11 E 199 ALA TRP LEU VAL LYS ASP SER ASP GLY ALA LEU LYS ILE SEQRES 12 E 199 THR LYS THR GLU ASN GLY VAL ASN PRO LEU CYS PHE GLY SEQRES 13 E 199 GLN THR ALA LEU LEU GLY CYS ASP VAL TRP GLU HIS SER SEQRES 14 E 199 TYR TYR ILE ASP PHE ARG ASN LYS ARG PRO ALA TYR LEU SEQRES 15 E 199 THR ASN PHE LEU ASP LYS LEU VAL ASN TRP GLU ASN VAL SEQRES 16 E 199 ALA SER ARG MET HET MN A 301 1 HET CA A 302 1 HET MN E 301 1 HET CA E 302 1 HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION FORMUL 3 MN 2(MN 2+) FORMUL 4 CA 2(CA 2+) FORMUL 7 HOH *148(H2 O) HELIX 1 AA1 LEU A 15 GLY A 19 5 5 HELIX 2 AA2 SER A 21 LEU A 31 1 11 HELIX 3 AA3 LEU A 31 ALA A 45 1 15 HELIX 4 AA4 SER A 53 TYR A 62 1 10 HELIX 5 AA5 SER A 70 MET A 89 1 20 HELIX 6 AA6 PRO A 98 GLY A 110 1 13 HELIX 7 AA7 SER A 111 GLN A 126 1 16 HELIX 8 AA8 ASN A 152 GLY A 157 5 6 HELIX 9 AA9 TRP A 167 SER A 170 5 4 HELIX 10 AB1 TYR A 171 ARG A 176 1 6 HELIX 11 AB2 LYS A 178 LEU A 190 1 13 HELIX 12 AB3 ASN A 192 ARG A 199 1 8 HELIX 13 AB4 LEU E 15 GLY E 19 5 5 HELIX 14 AB5 SER E 21 LEU E 31 1 11 HELIX 15 AB6 LEU E 31 ALA E 45 1 15 HELIX 16 AB7 SER E 53 TYR E 62 1 10 HELIX 17 AB8 SER E 70 MET E 88 1 19 HELIX 18 AB9 PRO E 98 GLY E 110 1 13 HELIX 19 AC1 SER E 111 GLN E 126 1 16 HELIX 20 AC2 ASN E 152 GLY E 157 5 6 HELIX 21 AC3 TRP E 167 SER E 170 5 4 HELIX 22 AC4 TYR E 171 ARG E 176 1 6 HELIX 23 AC5 LYS E 178 LEU E 190 1 13 HELIX 24 AC6 ASN E 192 ARG E 199 1 8 SHEET 1 AA1 3 LEU A 142 GLU A 148 0 SHEET 2 AA1 3 GLY A 130 LYS A 136 -1 N VAL A 135 O LYS A 143 SHEET 3 AA1 3 THR A 159 ASP A 165 -1 O THR A 159 N LYS A 136 SHEET 1 AA2 3 LEU E 142 GLU E 148 0 SHEET 2 AA2 3 GLY E 130 LYS E 136 -1 N VAL E 135 O LYS E 143 SHEET 3 AA2 3 THR E 159 ASP E 165 -1 O LEU E 161 N LEU E 134 LINK NE2 HIS A 28 MN MN A 301 1555 1555 2.23 LINK NE2 HIS A 82 MN MN A 301 1555 1555 2.13 LINK OD2 ASP A 165 MN MN A 301 1555 1555 2.08 LINK NE2 HIS A 169 MN MN A 301 1555 1555 2.18 LINK MN MN A 301 O HOH A 434 1555 1555 2.38 LINK NE2 HIS E 28 MN MN E 301 1555 1555 2.24 LINK NE2 HIS E 82 MN MN E 301 1555 1555 2.14 LINK OD1 ASP E 94 CA CA E 302 1555 1555 2.60 LINK OD2 ASP E 165 MN MN E 301 1555 1555 2.02 LINK NE2 HIS E 169 MN MN E 301 1555 1555 2.22 LINK MN MN E 301 O HOH E 440 1555 1555 2.18 LINK CA CA E 302 O HOH E 401 1555 1555 2.33 LINK CA CA E 302 O HOH E 437 1555 1555 2.23 CRYST1 162.650 162.650 44.000 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006148 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006148 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022727 0.00000