HEADER DNA BINDING PROTEIN 18-NOV-20 7B06 TITLE TGOT_RT521 APO COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TO POL; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS GORGONARIUS; SOURCE 3 ORGANISM_TAXID: 71997; SOURCE 4 GENE: POL, POLA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ARCHAEA, POLYMERASE, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.SAMSON,P.LEGRAND,M.TEKPINAR,J.ROZENSKI,M.ABRAMOV,P.HOLLIGER, AUTHOR 2 V.PINHEIRO,P.HERDEWIJN,M.DELARUE REVDAT 3 06-NOV-24 7B06 1 REMARK REVDAT 2 31-JAN-24 7B06 1 REMARK REVDAT 1 30-DEC-20 7B06 0 JRNL AUTH C.SAMSON,P.LEGRAND,M.TEKPINAR,J.ROZENSKI,M.ABRAMOV, JRNL AUTH 2 P.HOLLIGER,V.B.PINHEIRO,P.HERDWIJN,M.DELARUE JRNL TITL STRUCTURAL STUDIES OF HNA SUBSTRATE SPECIFICITY IN MUTANTS JRNL TITL 2 OF AN ARCHAEAL DNA POLYMERASE OBTAINED BY DIRECTED JRNL TITL 3 EVOLUTION. JRNL REF BIOMOLECULES V. 10 2020 JRNL REFN ESSN 2218-273X JRNL PMID 33302546 JRNL DOI 10.3390/BIOM10121647 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (20-MAY-2020) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 36488 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1825 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.37 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.15 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 730 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2514 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 693 REMARK 3 BIN R VALUE (WORKING SET) : 0.2512 REMARK 3 BIN FREE R VALUE : 0.2559 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.07 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 37 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5641 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.96110 REMARK 3 B22 (A**2) : -7.59620 REMARK 3 B33 (A**2) : 11.55730 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.440 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.341 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.227 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.346 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.231 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5768 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7776 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2081 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 966 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5768 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 724 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4446 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 0.75 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.69 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.04 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1 - A|131 } REMARK 3 ORIGIN FOR THE GROUP (A): -18.0008 -7.0125 -7.3182 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: -0.2657 REMARK 3 T33: -0.3040 T12: 0.0539 REMARK 3 T13: -0.0326 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 3.2368 L22: 3.2605 REMARK 3 L33: 5.8934 L12: 1.1381 REMARK 3 L13: -2.7774 L23: -1.1591 REMARK 3 S TENSOR REMARK 3 S11: -0.0714 S12: 0.1079 S13: -0.2763 REMARK 3 S21: 0.0595 S22: 0.0290 S23: 0.1993 REMARK 3 S31: 0.5442 S32: -0.3313 S33: 0.0424 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|132 - A|327 } REMARK 3 ORIGIN FOR THE GROUP (A): -7.7146 24.8486 -25.3831 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: -0.1564 REMARK 3 T33: -0.1929 T12: -0.1520 REMARK 3 T13: -0.0104 T23: 0.0441 REMARK 3 L TENSOR REMARK 3 L11: 2.7678 L22: 5.8089 REMARK 3 L33: 7.1030 L12: 0.4673 REMARK 3 L13: -0.1837 L23: -0.1782 REMARK 3 S TENSOR REMARK 3 S11: -0.1163 S12: 0.1853 S13: 0.5442 REMARK 3 S21: -0.2990 S22: 0.2340 S23: 0.3885 REMARK 3 S31: -0.5442 S32: -0.0783 S33: -0.1177 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|328 - A|532 } REMARK 3 ORIGIN FOR THE GROUP (A): -13.3572 15.8794 11.4152 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: -0.1907 REMARK 3 T33: -0.2817 T12: 0.0016 REMARK 3 T13: -0.0037 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.3682 L22: 2.7898 REMARK 3 L33: 6.3845 L12: 0.0827 REMARK 3 L13: -1.4549 L23: 0.8551 REMARK 3 S TENSOR REMARK 3 S11: 0.1053 S12: -0.1638 S13: 0.3334 REMARK 3 S21: 0.2319 S22: 0.0890 S23: -0.0624 REMARK 3 S31: -0.4783 S32: 0.4324 S33: -0.1943 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|533 - A|610 } REMARK 3 ORIGIN FOR THE GROUP (A): -6.4302 36.9333 20.4048 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: 0.2784 REMARK 3 T33: 0.3040 T12: -0.1520 REMARK 3 T13: -0.0238 T23: 0.0893 REMARK 3 L TENSOR REMARK 3 L11: 2.8308 L22: 8.3155 REMARK 3 L33: 6.6157 L12: 2.8932 REMARK 3 L13: -0.1395 L23: -1.1246 REMARK 3 S TENSOR REMARK 3 S11: 0.1664 S12: -0.0337 S13: 0.5442 REMARK 3 S21: 0.4715 S22: -0.1987 S23: -0.5442 REMARK 3 S31: -0.4374 S32: 0.5442 S33: 0.0322 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|613 - A|755 } REMARK 3 ORIGIN FOR THE GROUP (A): -13.0627 58.1158 2.1043 REMARK 3 T TENSOR REMARK 3 T11: 0.3040 T22: 0.3040 REMARK 3 T33: 0.3040 T12: -0.0824 REMARK 3 T13: 0.0027 T23: 0.0717 REMARK 3 L TENSOR REMARK 3 L11: 8.3155 L22: 8.3155 REMARK 3 L33: 8.3155 L12: -0.5809 REMARK 3 L13: 0.7958 L23: -0.5222 REMARK 3 S TENSOR REMARK 3 S11: 0.0496 S12: 0.3784 S13: 0.0581 REMARK 3 S21: -0.1648 S22: -0.2961 S23: 0.1613 REMARK 3 S31: -0.2342 S32: -0.1703 S33: 0.2464 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7B06 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112380. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36488 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.340 REMARK 200 RESOLUTION RANGE LOW (A) : 43.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.56500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1TGO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 400, 0.1 M SODIUM ACETATE REMARK 280 PH4.6 AND 0.2M MGCL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.26500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.65000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.92500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.65000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.26500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.92500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 384 REMARK 465 VAL A 611 REMARK 465 ARG A 612 REMARK 465 LEU A 660 REMARK 465 VAL A 661 REMARK 465 ILE A 662 REMARK 465 TYR A 663 REMARK 465 LYS A 664 REMARK 465 GLN A 665 REMARK 465 ILE A 666 REMARK 465 THR A 667 REMARK 465 ARG A 668 REMARK 465 ASP A 669 REMARK 465 LEU A 670 REMARK 465 LYS A 671 REMARK 465 ASP A 672 REMARK 465 TYR A 673 REMARK 465 LYS A 674 REMARK 465 ALA A 675 REMARK 465 THR A 676 REMARK 465 GLY A 677 REMARK 465 PRO A 678 REMARK 465 HIS A 679 REMARK 465 VAL A 680 REMARK 465 ALA A 681 REMARK 465 VAL A 682 REMARK 465 ALA A 683 REMARK 465 LYS A 684 REMARK 465 ARG A 685 REMARK 465 LEU A 686 REMARK 465 ALA A 687 REMARK 465 ALA A 688 REMARK 465 ARG A 689 REMARK 465 GLY A 690 REMARK 465 ILE A 691 REMARK 465 LYS A 692 REMARK 465 ILE A 693 REMARK 465 ARG A 694 REMARK 465 PRO A 695 REMARK 465 GLY A 696 REMARK 465 THR A 697 REMARK 465 VAL A 698 REMARK 465 ILE A 699 REMARK 465 SER A 700 REMARK 465 TYR A 701 REMARK 465 ILE A 702 REMARK 465 VAL A 703 REMARK 465 LEU A 704 REMARK 465 LYS A 705 REMARK 465 GLY A 706 REMARK 465 SER A 707 REMARK 465 GLY A 708 REMARK 465 ARG A 709 REMARK 465 ILE A 710 REMARK 465 GLY A 711 REMARK 465 ASP A 712 REMARK 465 ARG A 713 REMARK 465 ALA A 714 REMARK 465 ILE A 715 REMARK 465 PRO A 716 REMARK 465 PHE A 717 REMARK 465 ASP A 718 REMARK 465 GLU A 719 REMARK 465 PHE A 720 REMARK 465 ASP A 721 REMARK 465 PRO A 722 REMARK 465 ALA A 723 REMARK 465 LYS A 724 REMARK 465 HIS A 725 REMARK 465 LYS A 726 REMARK 465 ARG A 756 REMARK 465 TYR A 757 REMARK 465 GLN A 758 REMARK 465 LYS A 759 REMARK 465 THR A 760 REMARK 465 ARG A 761 REMARK 465 GLN A 762 REMARK 465 VAL A 763 REMARK 465 GLY A 764 REMARK 465 LEU A 765 REMARK 465 GLY A 766 REMARK 465 ALA A 767 REMARK 465 TRP A 768 REMARK 465 LEU A 769 REMARK 465 LYS A 770 REMARK 465 PRO A 771 REMARK 465 LYS A 772 REMARK 465 THR A 773 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 610 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 59 -135.20 61.48 REMARK 500 ASN A 175 99.35 -67.94 REMARK 500 PHE A 214 -70.72 -136.26 REMARK 500 ARG A 247 -165.08 -113.35 REMARK 500 THR A 301 71.28 58.35 REMARK 500 ASN A 399 73.68 54.42 REMARK 500 GLN A 436 -60.81 69.83 REMARK 500 TRP A 504 38.71 -94.41 REMARK 500 CYS A 506 93.66 -161.01 REMARK 500 THR A 541 -64.57 59.55 REMARK 500 VAL A 589 -70.24 -73.87 REMARK 500 ASP A 601 16.70 94.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 7B06 A 1 773 UNP P56689 DPOL_THEGO 1 773 SEQADV 7B06 GLN A 93 UNP P56689 VAL 93 CONFLICT SEQADV 7B06 ALA A 141 UNP P56689 ASP 141 CONFLICT SEQADV 7B06 ALA A 143 UNP P56689 GLU 143 CONFLICT SEQADV 7B06 LEU A 485 UNP P56689 ALA 485 CONFLICT SEQADV 7B06 LEU A 521 UNP P56689 ILE 521 CONFLICT SEQADV 7B06 LYS A 664 UNP P56689 GLU 664 CONFLICT SEQRES 1 A 773 MET ILE LEU ASP THR ASP TYR ILE THR GLU ASP GLY LYS SEQRES 2 A 773 PRO VAL ILE ARG ILE PHE LYS LYS GLU ASN GLY GLU PHE SEQRES 3 A 773 LYS ILE ASP TYR ASP ARG ASN PHE GLU PRO TYR ILE TYR SEQRES 4 A 773 ALA LEU LEU LYS ASP ASP SER ALA ILE GLU ASP VAL LYS SEQRES 5 A 773 LYS ILE THR ALA GLU ARG HIS GLY THR THR VAL ARG VAL SEQRES 6 A 773 VAL ARG ALA GLU LYS VAL LYS LYS LYS PHE LEU GLY ARG SEQRES 7 A 773 PRO ILE GLU VAL TRP LYS LEU TYR PHE THR HIS PRO GLN SEQRES 8 A 773 ASP GLN PRO ALA ILE ARG ASP LYS ILE LYS GLU HIS PRO SEQRES 9 A 773 ALA VAL VAL ASP ILE TYR GLU TYR ASP ILE PRO PHE ALA SEQRES 10 A 773 LYS ARG TYR LEU ILE ASP LYS GLY LEU ILE PRO MET GLU SEQRES 11 A 773 GLY ASP GLU GLU LEU LYS MET LEU ALA PHE ALA ILE ALA SEQRES 12 A 773 THR LEU TYR HIS GLU GLY GLU GLU PHE ALA GLU GLY PRO SEQRES 13 A 773 ILE LEU MET ILE SER TYR ALA ASP GLU GLU GLY ALA ARG SEQRES 14 A 773 VAL ILE THR TRP LYS ASN ILE ASP LEU PRO TYR VAL ASP SEQRES 15 A 773 VAL VAL SER THR GLU LYS GLU MET ILE LYS ARG PHE LEU SEQRES 16 A 773 LYS VAL VAL LYS GLU LYS ASP PRO ASP VAL LEU ILE THR SEQRES 17 A 773 TYR ASN GLY ASP ASN PHE ASP PHE ALA TYR LEU LYS LYS SEQRES 18 A 773 ARG SER GLU LYS LEU GLY VAL LYS PHE ILE LEU GLY ARG SEQRES 19 A 773 GLU GLY SER GLU PRO LYS ILE GLN ARG MET GLY ASP ARG SEQRES 20 A 773 PHE ALA VAL GLU VAL LYS GLY ARG ILE HIS PHE ASP LEU SEQRES 21 A 773 TYR PRO VAL ILE ARG ARG THR ILE ASN LEU PRO THR TYR SEQRES 22 A 773 THR LEU GLU ALA VAL TYR GLU ALA ILE PHE GLY GLN PRO SEQRES 23 A 773 LYS GLU LYS VAL TYR ALA GLU GLU ILE ALA GLN ALA TRP SEQRES 24 A 773 GLU THR GLY GLU GLY LEU GLU ARG VAL ALA ARG TYR SER SEQRES 25 A 773 MET GLU ASP ALA LYS VAL THR TYR GLU LEU GLY LYS GLU SEQRES 26 A 773 PHE PHE PRO MET GLU ALA GLN LEU SER ARG LEU VAL GLY SEQRES 27 A 773 GLN SER LEU TRP ASP VAL SER ARG SER SER THR GLY ASN SEQRES 28 A 773 LEU VAL GLU TRP PHE LEU LEU ARG LYS ALA TYR GLU ARG SEQRES 29 A 773 ASN GLU LEU ALA PRO ASN LYS PRO ASP GLU ARG GLU LEU SEQRES 30 A 773 ALA ARG ARG ARG GLU SER TYR ALA GLY GLY TYR VAL LYS SEQRES 31 A 773 GLU PRO GLU ARG GLY LEU TRP GLU ASN ILE VAL TYR LEU SEQRES 32 A 773 ASP PHE ARG SER LEU TYR PRO SER ILE ILE ILE THR HIS SEQRES 33 A 773 ASN VAL SER PRO ASP THR LEU ASN ARG GLU GLY CYS GLU SEQRES 34 A 773 GLU TYR ASP VAL ALA PRO GLN VAL GLY HIS LYS PHE CYS SEQRES 35 A 773 LYS ASP PHE PRO GLY PHE ILE PRO SER LEU LEU GLY ASP SEQRES 36 A 773 LEU LEU GLU GLU ARG GLN LYS VAL LYS LYS LYS MET LYS SEQRES 37 A 773 ALA THR ILE ASP PRO ILE GLU LYS LYS LEU LEU ASP TYR SEQRES 38 A 773 ARG GLN ARG LEU ILE LYS ILE LEU ALA ASN SER PHE TYR SEQRES 39 A 773 GLY TYR TYR GLY TYR ALA LYS ALA ARG TRP TYR CYS LYS SEQRES 40 A 773 GLU CYS ALA GLU SER VAL THR ALA TRP GLY ARG GLN TYR SEQRES 41 A 773 LEU GLU THR THR ILE ARG GLU ILE GLU GLU LYS PHE GLY SEQRES 42 A 773 PHE LYS VAL LEU TYR ALA ASP THR ASP GLY PHE PHE ALA SEQRES 43 A 773 THR ILE PRO GLY ALA ASP ALA GLU THR VAL LYS LYS LYS SEQRES 44 A 773 ALA LYS GLU PHE LEU ASP TYR ILE ASN ALA LYS LEU PRO SEQRES 45 A 773 GLY LEU LEU GLU LEU GLU TYR GLU GLY PHE TYR LYS ARG SEQRES 46 A 773 GLY PHE PHE VAL THR LYS LYS LYS TYR ALA VAL ILE ASP SEQRES 47 A 773 GLU GLU ASP LYS ILE THR THR ARG GLY LEU GLU ILE VAL SEQRES 48 A 773 ARG ARG ASP TRP SER GLU ILE ALA LYS GLU THR GLN ALA SEQRES 49 A 773 ARG VAL LEU GLU ALA ILE LEU LYS HIS GLY ASP VAL GLU SEQRES 50 A 773 GLU ALA VAL ARG ILE VAL LYS GLU VAL THR GLU LYS LEU SEQRES 51 A 773 SER LYS TYR GLU VAL PRO PRO GLU LYS LEU VAL ILE TYR SEQRES 52 A 773 LYS GLN ILE THR ARG ASP LEU LYS ASP TYR LYS ALA THR SEQRES 53 A 773 GLY PRO HIS VAL ALA VAL ALA LYS ARG LEU ALA ALA ARG SEQRES 54 A 773 GLY ILE LYS ILE ARG PRO GLY THR VAL ILE SER TYR ILE SEQRES 55 A 773 VAL LEU LYS GLY SER GLY ARG ILE GLY ASP ARG ALA ILE SEQRES 56 A 773 PRO PHE ASP GLU PHE ASP PRO ALA LYS HIS LYS TYR ASP SEQRES 57 A 773 ALA GLU TYR TYR ILE GLU ASN GLN VAL LEU PRO ALA VAL SEQRES 58 A 773 GLU ARG ILE LEU ARG ALA PHE GLY TYR ARG LYS GLU ASP SEQRES 59 A 773 LEU ARG TYR GLN LYS THR ARG GLN VAL GLY LEU GLY ALA SEQRES 60 A 773 TRP LEU LYS PRO LYS THR FORMUL 2 HOH *118(H2 O) HELIX 1 AA1 ASP A 44 SER A 46 5 3 HELIX 2 AA2 ALA A 47 LYS A 53 1 7 HELIX 3 AA3 GLN A 91 GLU A 102 1 12 HELIX 4 AA4 PRO A 115 GLY A 125 1 11 HELIX 5 AA5 THR A 186 ASP A 202 1 17 HELIX 6 AA6 PHE A 214 GLY A 227 1 14 HELIX 7 AA7 LEU A 260 ILE A 268 1 9 HELIX 8 AA8 THR A 274 GLY A 284 1 11 HELIX 9 AA9 TYR A 291 GLU A 300 1 10 HELIX 10 AB1 GLY A 304 GLY A 338 1 35 HELIX 11 AB2 SER A 340 ARG A 346 1 7 HELIX 12 AB3 SER A 348 ARG A 364 1 17 HELIX 13 AB4 ASP A 373 ARG A 380 1 8 HELIX 14 AB5 SER A 407 HIS A 416 1 10 HELIX 15 AB6 GLY A 447 THR A 470 1 24 HELIX 16 AB7 ASP A 472 ASN A 491 1 20 HELIX 17 AB8 SER A 492 GLY A 498 1 7 HELIX 18 AB9 CYS A 506 GLY A 533 1 28 HELIX 19 AC1 ASP A 552 LEU A 571 1 20 HELIX 20 AC2 SER A 616 LYS A 632 1 17 HELIX 21 AC3 ASP A 635 LYS A 652 1 18 HELIX 22 AC4 ASP A 728 ASN A 735 1 8 HELIX 23 AC5 GLN A 736 ARG A 746 1 11 HELIX 24 AC6 ALA A 747 GLY A 749 5 3 HELIX 25 AC7 ARG A 751 LEU A 755 5 5 SHEET 1 AA1 3 ILE A 2 GLU A 10 0 SHEET 2 AA1 3 LYS A 13 GLU A 22 -1 O PHE A 19 N LEU A 3 SHEET 3 AA1 3 GLU A 25 ASP A 31 -1 O LYS A 27 N LYS A 20 SHEET 1 AA2 4 ARG A 67 PHE A 75 0 SHEET 2 AA2 4 ARG A 78 TYR A 86 -1 O LYS A 84 N GLU A 69 SHEET 3 AA2 4 TYR A 37 LEU A 42 -1 N ILE A 38 O LEU A 85 SHEET 4 AA2 4 VAL A 106 TYR A 110 -1 O ASP A 108 N LEU A 41 SHEET 1 AA3 2 ALA A 56 ARG A 58 0 SHEET 2 AA3 2 THR A 61 VAL A 63 -1 O VAL A 63 N ALA A 56 SHEET 1 AA4 6 VAL A 181 VAL A 183 0 SHEET 2 AA4 6 GLY A 167 THR A 172 1 N VAL A 170 O ASP A 182 SHEET 3 AA4 6 ILE A 157 ASP A 164 -1 N ILE A 160 O ILE A 171 SHEET 4 AA4 6 MET A 137 THR A 144 -1 N ALA A 141 O SER A 161 SHEET 5 AA4 6 VAL A 205 THR A 208 1 O ILE A 207 N LEU A 138 SHEET 6 AA4 6 ILE A 256 ASP A 259 1 O PHE A 258 N LEU A 206 SHEET 1 AA5 2 LYS A 240 ARG A 243 0 SHEET 2 AA5 2 PHE A 248 GLU A 251 -1 O ALA A 249 N GLN A 242 SHEET 1 AA6 6 LYS A 535 ALA A 539 0 SHEET 2 AA6 6 GLY A 543 THR A 547 -1 O THR A 547 N LYS A 535 SHEET 3 AA6 6 LEU A 396 PHE A 405 -1 N VAL A 401 O ALA A 546 SHEET 4 AA6 6 LEU A 577 THR A 590 -1 O LYS A 584 N ASN A 399 SHEET 5 AA6 6 LYS A 593 ILE A 597 -1 O ALA A 595 N PHE A 587 SHEET 6 AA6 6 ILE A 603 THR A 605 -1 O THR A 604 N VAL A 596 SHEET 1 AA7 2 TYR A 431 VAL A 433 0 SHEET 2 AA7 2 LYS A 440 CYS A 442 -1 O PHE A 441 N ASP A 432 SSBOND 1 CYS A 428 CYS A 442 1555 1555 2.05 SSBOND 2 CYS A 506 CYS A 509 1555 1555 2.05 CRYST1 70.530 109.850 111.300 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014178 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009103 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008985 0.00000 CONECT 3512 3625 CONECT 3625 3512 CONECT 4164 4188 CONECT 4188 4164 MASTER 428 0 0 25 25 0 0 6 5759 1 4 60 END