HEADER TRANSFERASE 19-NOV-20 7B0D TITLE SUGAR TRANSAMINASE FROM ARCHAEOGLOBUS VENEFICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMINE--SCYLLO-INOSITOL TRANSAMINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SUGAR TRANSAMINASE; COMPND 5 EC: 2.6.1.50; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS VENEFICUS (STRAIN DSM 11195 / SOURCE 3 SNP6); SOURCE 4 ORGANISM_TAXID: 693661; SOURCE 5 STRAIN: DSM 11195 / SNP6; SOURCE 6 GENE: ARCVE_0555; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS AMINOTRANSFERASE, THERMOSTABILITY, CATALYSIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.JAMES,J.A.LITTLECHILD,S.A.DE ROSE,M.N.ISUPOV REVDAT 2 31-JAN-24 7B0D 1 REMARK REVDAT 1 01-DEC-21 7B0D 0 JRNL AUTH P.JAMES,J.A.LITTLECHILD,S.A.DE ROSE,M.N.ISUPOV,S.KARKI, JRNL AUTH 2 A.B.TABJI,A.GARCIA-MOYANO,N.K.BIRKELAND JRNL TITL SUGAR TRANSAMINASES FROM HOT ENVIRONMENTS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 212778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.993 REMARK 3 FREE R VALUE TEST SET COUNT : 10625 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.30 REMARK 3 REFLECTION IN BIN (WORKING SET) : 13336 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.3140 REMARK 3 BIN FREE R VALUE SET COUNT : 689 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5982 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 129 REMARK 3 SOLVENT ATOMS : 725 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.31000 REMARK 3 B22 (A**2) : 0.07800 REMARK 3 B33 (A**2) : 0.23200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.042 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.045 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.034 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.838 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.974 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7380 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 7150 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10159 ; 1.665 ; 1.653 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16743 ; 1.377 ; 1.583 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1018 ; 6.167 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 432 ;34.117 ;23.079 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1461 ;14.353 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;17.695 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 953 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8480 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1698 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1411 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 120 ; 0.203 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3241 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 547 ; 0.189 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.158 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3300 ; 2.673 ; 4.869 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3294 ; 2.650 ; 4.864 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4201 ; 3.758 ; 8.219 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4202 ; 3.759 ; 8.224 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4080 ; 4.894 ; 6.330 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4041 ; 4.790 ; 6.309 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5806 ; 6.622 ;10.088 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5747 ; 6.554 ;10.047 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 0 A 367 1 REMARK 3 2 B 0 B 367 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7B0D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112375. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 212879 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.270 REMARK 200 RESOLUTION RANGE LOW (A) : 49.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 1.35200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 3NYU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M PHOSPHATE/CITRATE 20 % W/V PEG REMARK 280 6K, PH 4.2, MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.11350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.60800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.97650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.60800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.11350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.97650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMER REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMER REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -27 REMARK 465 ALA A -26 REMARK 465 GLY A -25 REMARK 465 SER A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 GLY A -17 REMARK 465 MET A -16 REMARK 465 ALA A -15 REMARK 465 SER A -14 REMARK 465 MET A -13 REMARK 465 THR A -12 REMARK 465 GLY A -11 REMARK 465 GLY A -10 REMARK 465 GLN A -9 REMARK 465 GLN A -8 REMARK 465 MET A -7 REMARK 465 GLY A -6 REMARK 465 ARG A -5 REMARK 465 SER A -4 REMARK 465 GLY A -3 REMARK 465 ASP A -2 REMARK 465 ASP A -1 REMARK 465 SER A 368 REMARK 465 ARG A 369 REMARK 465 LYS A 370 REMARK 465 SER A 371 REMARK 465 MET B -27 REMARK 465 ALA B -26 REMARK 465 GLY B -25 REMARK 465 SER B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 GLY B -17 REMARK 465 MET B -16 REMARK 465 ALA B -15 REMARK 465 SER B -14 REMARK 465 MET B -13 REMARK 465 THR B -12 REMARK 465 GLY B -11 REMARK 465 GLY B -10 REMARK 465 GLN B -9 REMARK 465 GLN B -8 REMARK 465 MET B -7 REMARK 465 GLY B -6 REMARK 465 ARG B -5 REMARK 465 SER B -4 REMARK 465 GLY B -3 REMARK 465 ASP B -2 REMARK 465 ASP B -1 REMARK 465 SER B 368 REMARK 465 ARG B 369 REMARK 465 LYS B 370 REMARK 465 SER B 371 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS B 131 H ALA B 137 1.23 REMARK 500 HD1 HIS A 131 H ALA A 137 1.24 REMARK 500 HE2 HIS B 135 H LYS B 274 1.26 REMARK 500 HE2 HIS A 135 H LYS A 274 1.26 REMARK 500 HZ1 LYS A 168 O HOH A 510 1.46 REMARK 500 OD1 ASP B 90 HH TYR B 319 1.50 REMARK 500 O HOH A 682 O HOH A 779 2.04 REMARK 500 O1 PO4 A 412 O HOH A 507 2.06 REMARK 500 O4 PO4 A 410 O HOH A 508 2.06 REMARK 500 O2 PO4 B 2111 O HOH B 2205 2.10 REMARK 500 OD1 ASP A 138 O HOH A 509 2.15 REMARK 500 O HOH A 537 O HOH A 798 2.16 REMARK 500 NZ LYS A 168 O HOH A 510 2.16 REMARK 500 O PHE B 4 O HOH B 2208 2.17 REMARK 500 O HOH B 2263 O HOH B 2486 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 190 51.10 -108.60 REMARK 500 TYR A 190 46.49 -105.01 REMARK 500 ASN A 212 55.23 -113.12 REMARK 500 TYR A 219 -11.54 88.59 REMARK 500 TYR A 219 -14.13 90.57 REMARK 500 TYR B 133 -0.87 69.52 REMARK 500 ALA B 160 30.48 -140.77 REMARK 500 TYR B 190 44.17 -106.94 REMARK 500 ASN B 212 56.32 -111.80 REMARK 500 TYR B 213 18.93 59.78 REMARK 500 TYR B 219 -5.53 87.96 REMARK 500 GLU B 323 92.01 -67.48 REMARK 500 TYR B 324 70.74 -117.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 409 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 57 OD1 REMARK 620 2 HOH A 594 O 160.7 REMARK 620 3 HOH A 677 O 80.4 80.4 REMARK 620 4 ASN B 57 OD1 86.6 97.8 100.3 REMARK 620 5 HOH B2303 O 96.8 85.2 98.6 161.1 REMARK 620 6 HOH B2366 O 99.6 99.7 179.7 80.0 81.1 REMARK 620 N 1 2 3 4 5 DBREF 7B0D A 1 371 UNP F2KQE6 F2KQE6_ARCVS 1 371 DBREF 7B0D B 1 371 UNP F2KQE6 F2KQE6_ARCVS 1 371 SEQADV 7B0D MET A -27 UNP F2KQE6 INITIATING METHIONINE SEQADV 7B0D ALA A -26 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY A -25 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D SER A -24 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS A -23 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS A -22 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS A -21 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS A -20 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS A -19 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS A -18 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY A -17 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D MET A -16 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ALA A -15 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D SER A -14 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D MET A -13 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D THR A -12 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY A -11 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY A -10 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLN A -9 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLN A -8 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D MET A -7 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY A -6 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ARG A -5 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D SER A -4 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY A -3 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ASP A -2 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ASP A -1 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ASP A 0 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D MET B -27 UNP F2KQE6 INITIATING METHIONINE SEQADV 7B0D ALA B -26 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY B -25 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D SER B -24 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS B -23 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS B -22 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS B -21 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS B -20 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS B -19 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D HIS B -18 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY B -17 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D MET B -16 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ALA B -15 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D SER B -14 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D MET B -13 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D THR B -12 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY B -11 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY B -10 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLN B -9 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLN B -8 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D MET B -7 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY B -6 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ARG B -5 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D SER B -4 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D GLY B -3 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ASP B -2 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ASP B -1 UNP F2KQE6 EXPRESSION TAG SEQADV 7B0D ASP B 0 UNP F2KQE6 EXPRESSION TAG SEQRES 1 A 399 MET ALA GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 399 SER MET THR GLY GLY GLN GLN MET GLY ARG SER GLY ASP SEQRES 3 A 399 ASP ASP MET ILE PRO PHE VAL ASP LEU LYS ARG GLU TYR SEQRES 4 A 399 GLN GLU ILE LYS GLU GLU ILE ASP GLN ALA ILE GLN ARG SEQRES 5 A 399 VAL LEU GLU ARG GLY TRP PHE ILE LEU GLY GLU GLU LEU SEQRES 6 A 399 GLU ALA PHE GLU LYS GLU PHE SER SER TYR ILE GLY ALA SEQRES 7 A 399 LYS TYR GLY ILE GLY VAL ASN SER GLY SER ASP ALA LEU SEQRES 8 A 399 TYR LEU GLY VAL LYS ALA LEU GLY ILE GLY LYS GLY ASP SEQRES 9 A 399 GLU VAL ILE THR VAL SER HIS THR PHE ILE SER THR VAL SEQRES 10 A 399 ASP ALA ILE VAL ARG ASN GLY ALA LYS PRO VAL PHE VAL SEQRES 11 A 399 ASP ILE ASP PRO GLU THR TYR THR ILE ASP VAL SER GLN SEQRES 12 A 399 ILE GLU LYS LYS ILE THR GLU ARG THR LYS ALA ILE LEU SEQRES 13 A 399 PRO VAL HIS LEU TYR GLY HIS PRO ALA ASP MET GLY SER SEQRES 14 A 399 ILE MET GLU ILE GLY GLU LYS TYR SER LEU PHE VAL ILE SEQRES 15 A 399 GLU ASP ALA CYS GLN ALA HIS GLY ALA GLU TYR ASN GLY SEQRES 16 A 399 LYS LYS VAL GLY SER ILE GLY ASP ILE GLY CYS PHE SER SEQRES 17 A 399 PHE TYR PRO THR LLP ASN LEU GLY ALA TYR GLY ASP GLY SEQRES 18 A 399 GLY ILE VAL VAL THR ASN ASP ASP GLU LEU ALA ASN LYS SEQRES 19 A 399 LEU ARG THR LEU ARG ASN TYR GLY SER SER LYS LYS TYR SEQRES 20 A 399 TYR HIS GLU PHE VAL GLY VAL ASN SER ARG LEU ASP GLU SEQRES 21 A 399 ILE GLN ALA ALA ILE LEU ARG VAL LYS LEU LYS TYR LEU SEQRES 22 A 399 GLU GLU TRP ASN GLU LYS ARG ARG ASN ILE ALA ARG LEU SEQRES 23 A 399 TYR ASN GLU PHE LEU GLU SER SER ASP LEU VAL THR PRO SEQRES 24 A 399 THR GLU LYS GLU TYR ALA LYS HIS VAL TYR HIS LEU TYR SEQRES 25 A 399 VAL ILE ARG TYR LYS GLU ARG ASP LYS LEU GLN GLN ASN SEQRES 26 A 399 LEU LEU LYS CYS GLY ILE GLN THR GLN ILE HIS TYR PRO SEQRES 27 A 399 ILE PRO MET HIS ARG GLN LYS ALA TYR LEU GLU LEU GLU SEQRES 28 A 399 TYR ASN THR SER LEU PRO VAL THR GLU LYS ILE CYS ASN SEQRES 29 A 399 GLU ILE LEU SER LEU PRO MET HIS PRO TRP LEU ARG GLU SEQRES 30 A 399 GLU GLU ILE ARG ARG ILE SER ASN CYS ILE GLY GLU PHE SEQRES 31 A 399 LEU TRP MET SER ASN SER ARG LYS SER SEQRES 1 B 399 MET ALA GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 399 SER MET THR GLY GLY GLN GLN MET GLY ARG SER GLY ASP SEQRES 3 B 399 ASP ASP MET ILE PRO PHE VAL ASP LEU LYS ARG GLU TYR SEQRES 4 B 399 GLN GLU ILE LYS GLU GLU ILE ASP GLN ALA ILE GLN ARG SEQRES 5 B 399 VAL LEU GLU ARG GLY TRP PHE ILE LEU GLY GLU GLU LEU SEQRES 6 B 399 GLU ALA PHE GLU LYS GLU PHE SER SER TYR ILE GLY ALA SEQRES 7 B 399 LYS TYR GLY ILE GLY VAL ASN SER GLY SER ASP ALA LEU SEQRES 8 B 399 TYR LEU GLY VAL LYS ALA LEU GLY ILE GLY LYS GLY ASP SEQRES 9 B 399 GLU VAL ILE THR VAL SER HIS THR PHE ILE SER THR VAL SEQRES 10 B 399 ASP ALA ILE VAL ARG ASN GLY ALA LYS PRO VAL PHE VAL SEQRES 11 B 399 ASP ILE ASP PRO GLU THR TYR THR ILE ASP VAL SER GLN SEQRES 12 B 399 ILE GLU LYS LYS ILE THR GLU ARG THR LYS ALA ILE LEU SEQRES 13 B 399 PRO VAL HIS LEU TYR GLY HIS PRO ALA ASP MET GLY SER SEQRES 14 B 399 ILE MET GLU ILE GLY GLU LYS TYR SER LEU PHE VAL ILE SEQRES 15 B 399 GLU ASP ALA CYS GLN ALA HIS GLY ALA GLU TYR ASN GLY SEQRES 16 B 399 LYS LYS VAL GLY SER ILE GLY ASP ILE GLY CYS PHE SER SEQRES 17 B 399 PHE TYR PRO THR LLP ASN LEU GLY ALA TYR GLY ASP GLY SEQRES 18 B 399 GLY ILE VAL VAL THR ASN ASP ASP GLU LEU ALA ASN LYS SEQRES 19 B 399 LEU ARG THR LEU ARG ASN TYR GLY SER SER LYS LYS TYR SEQRES 20 B 399 TYR HIS GLU PHE VAL GLY VAL ASN SER ARG LEU ASP GLU SEQRES 21 B 399 ILE GLN ALA ALA ILE LEU ARG VAL LYS LEU LYS TYR LEU SEQRES 22 B 399 GLU GLU TRP ASN GLU LYS ARG ARG ASN ILE ALA ARG LEU SEQRES 23 B 399 TYR ASN GLU PHE LEU GLU SER SER ASP LEU VAL THR PRO SEQRES 24 B 399 THR GLU LYS GLU TYR ALA LYS HIS VAL TYR HIS LEU TYR SEQRES 25 B 399 VAL ILE ARG TYR LYS GLU ARG ASP LYS LEU GLN GLN ASN SEQRES 26 B 399 LEU LEU LYS CYS GLY ILE GLN THR GLN ILE HIS TYR PRO SEQRES 27 B 399 ILE PRO MET HIS ARG GLN LYS ALA TYR LEU GLU LEU GLU SEQRES 28 B 399 TYR ASN THR SER LEU PRO VAL THR GLU LYS ILE CYS ASN SEQRES 29 B 399 GLU ILE LEU SER LEU PRO MET HIS PRO TRP LEU ARG GLU SEQRES 30 B 399 GLU GLU ILE ARG ARG ILE SER ASN CYS ILE GLY GLU PHE SEQRES 31 B 399 LEU TRP MET SER ASN SER ARG LYS SER MODRES 7B0D LLP A 185 LYS MODIFIED RESIDUE MODRES 7B0D LLP B 185 LYS MODIFIED RESIDUE HET LLP A 185 42 HET LLP B 185 42 HET EDO A 401 10 HET EDO A 402 10 HET EDO A 403 10 HET EDO A 404 10 HET EDO A 405 10 HET EDO A 406 10 HET EDO A 407 10 HET EDO A 408 10 HET CA A 409 1 HET PO4 A 410 5 HET PO4 A 411 5 HET PO4 A 412 5 HET PO4 A 413 5 HET PO4 A 414 5 HET PO4 A 415 5 HET EDO B2101 10 HET EDO B2102 10 HET EDO B2103 10 HET PEG B2104 17 HET EDO B2105 10 HET EDO B2106 10 HET PEG B2107 17 HET TRS B2108 20 HET EDO B2109 10 HET PO4 B2110 5 HET PO4 B2111 5 HET PO4 B2112 5 HET PO4 B2113 5 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETNAM PO4 PHOSPHATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL HETSYN TRS TRIS BUFFER FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 EDO 14(C2 H6 O2) FORMUL 11 CA CA 2+ FORMUL 12 PO4 10(O4 P 3-) FORMUL 21 PEG 2(C4 H10 O3) FORMUL 25 TRS C4 H12 N O3 1+ FORMUL 31 HOH *725(H2 O) HELIX 1 AA1 ASP A 6 GLY A 29 1 24 HELIX 2 AA2 GLY A 34 GLY A 49 1 16 HELIX 3 AA3 SER A 58 LEU A 70 1 13 HELIX 4 AA4 PHE A 85 ARG A 94 1 10 HELIX 5 AA5 ASP A 112 ILE A 120 5 9 HELIX 6 AA6 HIS A 131 HIS A 135 5 5 HELIX 7 AA7 ASP A 138 SER A 150 1 13 HELIX 8 AA8 ASP A 200 ARG A 211 1 12 HELIX 9 AA9 ASP A 231 LYS A 243 1 13 HELIX 10 AB1 TYR A 244 GLU A 264 1 21 HELIX 11 AB2 GLU A 290 CYS A 301 1 12 HELIX 12 AB3 PRO A 312 LEU A 320 5 9 HELIX 13 AB4 LEU A 328 ASN A 336 1 9 HELIX 14 AB5 ARG A 348 ASN A 367 1 20 HELIX 15 AB6 ASP B 6 GLY B 29 1 24 HELIX 16 AB7 GLY B 34 GLY B 49 1 16 HELIX 17 AB8 SER B 58 LEU B 70 1 13 HELIX 18 AB9 PHE B 85 ARG B 94 1 10 HELIX 19 AC1 ASP B 112 ILE B 120 5 9 HELIX 20 AC2 HIS B 131 HIS B 135 5 5 HELIX 21 AC3 ASP B 138 SER B 150 1 13 HELIX 22 AC4 ASP B 200 ARG B 211 1 12 HELIX 23 AC5 ASP B 231 LYS B 243 1 13 HELIX 24 AC6 TYR B 244 GLU B 264 1 21 HELIX 25 AC7 GLU B 290 CYS B 301 1 12 HELIX 26 AC8 PRO B 312 ARG B 315 5 4 HELIX 27 AC9 GLN B 316 GLU B 321 1 6 HELIX 28 AD1 LEU B 328 ASN B 336 1 9 HELIX 29 AD2 ARG B 348 ASN B 367 1 20 SHEET 1 AA1 7 TYR A 52 VAL A 56 0 SHEET 2 AA1 7 GLY A 194 THR A 198 -1 O VAL A 196 N ILE A 54 SHEET 3 AA1 7 ILE A 176 SER A 180 -1 N GLY A 177 O VAL A 197 SHEET 4 AA1 7 PHE A 152 ASP A 156 1 N GLU A 155 O CYS A 178 SHEET 5 AA1 7 THR A 124 LEU A 128 1 N ILE A 127 O ILE A 154 SHEET 6 AA1 7 GLU A 77 VAL A 81 1 N ILE A 79 O LEU A 128 SHEET 7 AA1 7 LYS A 98 VAL A 102 1 O VAL A 102 N THR A 80 SHEET 1 AA2 3 LYS A 168 LYS A 169 0 SHEET 2 AA2 3 GLU A 164 TYR A 165 -1 N TYR A 165 O LYS A 168 SHEET 3 AA2 3 ALA A 277 LYS A 278 -1 O LYS A 278 N GLU A 164 SHEET 1 AA3 2 TYR A 284 ARG A 287 0 SHEET 2 AA3 2 ILE A 338 LEU A 341 -1 O LEU A 339 N ILE A 286 SHEET 1 AA4 7 TYR B 52 VAL B 56 0 SHEET 2 AA4 7 GLY B 194 THR B 198 -1 O VAL B 196 N ILE B 54 SHEET 3 AA4 7 ILE B 176 SER B 180 -1 N GLY B 177 O VAL B 197 SHEET 4 AA4 7 PHE B 152 ASP B 156 1 N GLU B 155 O CYS B 178 SHEET 5 AA4 7 THR B 124 LEU B 128 1 N LYS B 125 O PHE B 152 SHEET 6 AA4 7 GLU B 77 VAL B 81 1 N ILE B 79 O LEU B 128 SHEET 7 AA4 7 LYS B 98 VAL B 102 1 O VAL B 102 N THR B 80 SHEET 1 AA5 3 LYS B 168 LYS B 169 0 SHEET 2 AA5 3 GLU B 164 TYR B 165 -1 N TYR B 165 O LYS B 168 SHEET 3 AA5 3 ALA B 277 LYS B 278 -1 O LYS B 278 N GLU B 164 SHEET 1 AA6 2 TYR B 284 ARG B 287 0 SHEET 2 AA6 2 ILE B 338 LEU B 341 -1 O LEU B 339 N ILE B 286 SSBOND 1 CYS A 301 CYS A 358 1555 1555 2.15 SSBOND 2 CYS B 301 CYS B 358 1555 1555 2.11 LINK C THR A 184 N LLP A 185 1555 1555 1.34 LINK C LLP A 185 N ASN A 186 1555 1555 1.33 LINK C THR B 184 N LLP B 185 1555 1555 1.33 LINK C LLP B 185 N ASN B 186 1555 1555 1.32 LINK OD1 ASN A 57 CA CA A 409 1555 1555 2.20 LINK CA CA A 409 O HOH A 594 1555 1555 2.30 LINK CA CA A 409 O HOH A 677 1555 1555 2.33 LINK CA CA A 409 OD1 ASN B 57 1555 1555 2.20 LINK CA CA A 409 O HOH B2303 1555 1555 2.30 LINK CA CA A 409 O HOH B2366 1555 1555 2.32 CISPEP 1 HIS A 308 TYR A 309 0 9.97 CISPEP 2 HIS B 308 TYR B 309 0 10.00 CRYST1 70.227 105.953 111.216 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014240 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009438 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008992 0.00000