HEADER TRANSCRIPTION 25-NOV-20 7B1V TITLE DTXR-LIKE IRON-DEPENDENT REGULATOR IDER COMPLEXED WITH COBALT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DTXR FAMILY IRON (METAL) DEPENDENT REPRESSOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROPOLYSPORA ERYTHRAEA (STRAIN ATCC 11635 SOURCE 3 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338); SOURCE 4 ORGANISM_TAXID: 405948; SOURCE 5 STRAIN: ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 SOURCE 6 / NRRL 2338; SOURCE 7 GENE: A8924_2181; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET-28A(+) KEYWDS TRANSCRIPTION, TRANSCRIPTION REGULATION, REPRESSOR, REGULATOR, KEYWDS 2 TRANSCRIPTION REGULATOR, METAL SENSOR, IDER, IRON-DEPENDENT KEYWDS 3 REGULATOR, DTXR, HELIX-TURN-HELIX, METAL ION, METAL-BINDING PROTEIN, KEYWDS 4 DNA BINDING EXPDTA X-RAY DIFFRACTION AUTHOR D.MAURER,F.J.MARCOS-TORRES,J.J.GRIESE REVDAT 6 13-NOV-24 7B1V 1 REMARK REVDAT 5 31-JAN-24 7B1V 1 JRNL REMARK REVDAT 4 06-OCT-21 7B1V 1 JRNL REVDAT 3 29-SEP-21 7B1V 1 JRNL REMARK REVDAT 2 31-MAR-21 7B1V 1 REMARK HELIX SHEET LINK REVDAT 2 2 1 ATOM REVDAT 1 03-MAR-21 7B1V 0 JRNL AUTH F.J.MARCOS-TORRES,D.MAURER,L.JUNIAR,J.J.GRIESE JRNL TITL THE BACTERIAL IRON SENSOR IDER RECOGNIZES ITS DNA TARGETS BY JRNL TITL 2 INDIRECT READOUT. JRNL REF NUCLEIC ACIDS RES. V. 49 10120 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 34417623 JRNL DOI 10.1093/NAR/GKAB711 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH F.J.MARCOS-TORRES,D.MAURER,J.J.GRIESE REMARK 1 TITL THE BACTERIAL IRON SENSOR IDER RECOGNIZES ITS DNA TARGETS BY REMARK 1 TITL 2 INDIRECT READOUT REMARK 1 REF BIORXIV 2021 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2021.02.12.430932 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 62.7 REMARK 3 NUMBER OF REFLECTIONS : 16378 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 838 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 119 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 6.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.3500 REMARK 3 BIN FREE R VALUE SET COUNT : 12 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3420 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 67 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.23000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.17000 REMARK 3 B13 (A**2) : -0.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.677 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.293 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.206 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.051 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3460 ; 0.002 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3448 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4681 ; 1.149 ; 1.646 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7921 ; 1.017 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 436 ; 4.736 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 194 ;28.299 ;20.876 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 632 ;11.669 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;12.278 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 449 ; 0.033 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3866 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 728 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7B1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17216 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 61.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.5 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 54.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.57900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1U8R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25%(W/V) PEG 1500, PH 6.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 VAL A 56 REMARK 465 ALA A 57 REMARK 465 ARG A 60 REMARK 465 HIS A 61 REMARK 465 ALA A 201 REMARK 465 GLY A 202 REMARK 465 VAL A 203 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLY B 141 REMARK 465 ASP B 142 REMARK 465 SER B 143 REMARK 465 VAL B 144 REMARK 465 GLU B 145 REMARK 465 PRO B 146 REMARK 465 VAL B 147 REMARK 465 ASP B 148 REMARK 465 THR B 149 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 5 -55.37 74.84 REMARK 500 VAL A 140 10.83 -141.93 REMARK 500 ILE B 5 -56.92 78.32 REMARK 500 ARG B 60 8.38 80.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 301 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 10 SD REMARK 620 2 CSD A 102 O 175.9 REMARK 620 3 CSD A 102 OD2 82.7 101.2 REMARK 620 4 GLU A 105 OE2 93.5 87.0 100.3 REMARK 620 5 HIS A 106 NE2 86.3 89.6 162.5 94.0 REMARK 620 6 HOH A 407 O 97.7 81.8 81.3 168.8 86.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 302 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 79 NE2 REMARK 620 2 GLU A 83 OE2 89.6 REMARK 620 3 HIS A 98 ND1 92.2 113.7 REMARK 620 4 GLU A 172 OE2 92.6 148.1 98.0 REMARK 620 5 GLN A 175 OE1 178.5 89.5 87.0 88.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 301 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET B 10 SD REMARK 620 2 CSD B 102 O 171.8 REMARK 620 3 CSD B 102 OD2 83.8 93.1 REMARK 620 4 GLU B 105 OE2 95.8 92.2 100.0 REMARK 620 5 HIS B 106 NE2 91.0 90.1 164.6 94.9 REMARK 620 6 HOH B 410 O 86.8 85.1 76.3 175.3 88.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 302 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 79 NE2 REMARK 620 2 GLU B 83 OE2 89.3 REMARK 620 3 HIS B 98 ND1 93.5 113.2 REMARK 620 4 GLU B 172 OE2 93.1 147.0 99.4 REMARK 620 5 GLN B 175 OE1 175.6 86.7 89.8 89.2 REMARK 620 N 1 2 3 4 DBREF1 7B1V A 1 231 UNP A0A2A9J1W2_SACEN DBREF2 7B1V A A0A2A9J1W2 1 231 DBREF1 7B1V B 1 231 UNP A0A2A9J1W2_SACEN DBREF2 7B1V B A0A2A9J1W2 1 231 SEQADV 7B1V GLY A -1 UNP A0A2A9J1W EXPRESSION TAG SEQADV 7B1V HIS A 0 UNP A0A2A9J1W EXPRESSION TAG SEQADV 7B1V GLY B -1 UNP A0A2A9J1W EXPRESSION TAG SEQADV 7B1V HIS B 0 UNP A0A2A9J1W EXPRESSION TAG SEQRES 1 A 233 GLY HIS MET ASN ASP LEU ILE ASP THR THR GLU MET TYR SEQRES 2 A 233 LEU ARG THR ILE TYR ASP LEU GLU GLU GLU GLY VAL VAL SEQRES 3 A 233 PRO LEU ARG ALA ARG ILE ALA GLU ARG LEU GLU GLN SER SEQRES 4 A 233 GLY PRO THR VAL SER GLN THR VAL ALA ARG MET GLU ARG SEQRES 5 A 233 ASP GLY LEU LEU THR VAL ALA GLU ASP ARG HIS LEU GLU SEQRES 6 A 233 LEU THR LYS ALA GLY ARG ALA ARG ALA ILE SER VAL MET SEQRES 7 A 233 ARG LYS HIS ARG LEU ALA GLU ARG LEU LEU VAL ASP VAL SEQRES 8 A 233 ILE GLY LEU GLU TRP GLU GLN VAL HIS LEU GLU ALA CSD SEQRES 9 A 233 ARG TRP GLU HIS VAL MET SER GLU ALA VAL GLU ARG LYS SEQRES 10 A 233 LEU VAL LYS LEU LEU GLY ASN PRO THR THR SER PRO TYR SEQRES 11 A 233 GLY ASN PRO ILE PRO GLY LEU ASP GLU LEU GLY VAL GLY SEQRES 12 A 233 ASP SER VAL GLU PRO VAL ASP THR ASP LEU ARG ARG VAL SEQRES 13 A 233 ASP GLU VAL ALA ARG SER GLY GLY GLY ARG ALA LEU VAL SEQRES 14 A 233 CYS ARG ILE ALA GLU HIS VAL GLN LEU ASP PRO ASP LEU SEQRES 15 A 233 MET SER GLU LEU LYS LYS VAL GLY VAL VAL PRO GLY ASN SEQRES 16 A 233 GLU ILE ASP ILE VAL ALA VAL ALA GLY VAL ASN LYS PRO SEQRES 17 A 233 ILE GLN VAL GLN GLY SER GLU GLY GLY THR GLN LEU GLN SEQRES 18 A 233 PRO GLY ILE ALA HIS ALA VAL MET VAL ARG VAL LYS SEQRES 1 B 233 GLY HIS MET ASN ASP LEU ILE ASP THR THR GLU MET TYR SEQRES 2 B 233 LEU ARG THR ILE TYR ASP LEU GLU GLU GLU GLY VAL VAL SEQRES 3 B 233 PRO LEU ARG ALA ARG ILE ALA GLU ARG LEU GLU GLN SER SEQRES 4 B 233 GLY PRO THR VAL SER GLN THR VAL ALA ARG MET GLU ARG SEQRES 5 B 233 ASP GLY LEU LEU THR VAL ALA GLU ASP ARG HIS LEU GLU SEQRES 6 B 233 LEU THR LYS ALA GLY ARG ALA ARG ALA ILE SER VAL MET SEQRES 7 B 233 ARG LYS HIS ARG LEU ALA GLU ARG LEU LEU VAL ASP VAL SEQRES 8 B 233 ILE GLY LEU GLU TRP GLU GLN VAL HIS LEU GLU ALA CSD SEQRES 9 B 233 ARG TRP GLU HIS VAL MET SER GLU ALA VAL GLU ARG LYS SEQRES 10 B 233 LEU VAL LYS LEU LEU GLY ASN PRO THR THR SER PRO TYR SEQRES 11 B 233 GLY ASN PRO ILE PRO GLY LEU ASP GLU LEU GLY VAL GLY SEQRES 12 B 233 ASP SER VAL GLU PRO VAL ASP THR ASP LEU ARG ARG VAL SEQRES 13 B 233 ASP GLU VAL ALA ARG SER GLY GLY GLY ARG ALA LEU VAL SEQRES 14 B 233 CYS ARG ILE ALA GLU HIS VAL GLN LEU ASP PRO ASP LEU SEQRES 15 B 233 MET SER GLU LEU LYS LYS VAL GLY VAL VAL PRO GLY ASN SEQRES 16 B 233 GLU ILE ASP ILE VAL ALA VAL ALA GLY VAL ASN LYS PRO SEQRES 17 B 233 ILE GLN VAL GLN GLY SER GLU GLY GLY THR GLN LEU GLN SEQRES 18 B 233 PRO GLY ILE ALA HIS ALA VAL MET VAL ARG VAL LYS MODRES 7B1V CSD A 102 CYS MODIFIED RESIDUE MODRES 7B1V CSD B 102 CYS MODIFIED RESIDUE HET CSD A 102 8 HET CSD B 102 8 HET CO A 301 1 HET CO A 302 1 HET CO B 301 1 HET CO B 302 1 HETNAM CSD 3-SULFINOALANINE HETNAM CO COBALT (II) ION HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSD 2(C3 H7 N O4 S) FORMUL 3 CO 4(CO 2+) FORMUL 7 HOH *67(H2 O) HELIX 1 AA1 ASP A 6 GLU A 21 1 16 HELIX 2 AA2 LEU A 26 GLU A 35 1 10 HELIX 3 AA3 SER A 37 ASP A 51 1 15 HELIX 4 AA4 THR A 65 VAL A 89 1 25 HELIX 5 AA5 GLN A 96 GLU A 105 1 10 HELIX 6 AA6 SER A 109 GLY A 121 1 13 HELIX 7 AA7 VAL A 154 SER A 160 1 7 HELIX 8 AA8 ALA A 171 LEU A 176 1 6 HELIX 9 AA9 ASP A 177 GLY A 188 1 12 HELIX 10 AB1 GLN A 219 ALA A 225 1 7 HELIX 11 AB2 ASP B 6 GLU B 21 1 16 HELIX 12 AB3 LEU B 26 LEU B 34 1 9 HELIX 13 AB4 SER B 37 ASP B 51 1 15 HELIX 14 AB5 THR B 65 VAL B 89 1 25 HELIX 15 AB6 GLN B 96 GLU B 105 1 10 HELIX 16 AB7 SER B 109 LEU B 120 1 12 HELIX 17 AB8 GLY B 134 GLY B 139 1 6 HELIX 18 AB9 VAL B 154 SER B 160 1 7 HELIX 19 AC1 ALA B 171 LEU B 176 1 6 HELIX 20 AC2 ASP B 177 GLY B 188 1 12 HELIX 21 AC3 GLN B 219 ALA B 225 1 7 SHEET 1 AA1 2 LEU A 54 THR A 55 0 SHEET 2 AA1 2 GLU A 63 LEU A 64 -1 O GLU A 63 N THR A 55 SHEET 1 AA2 6 ARG A 152 ARG A 153 0 SHEET 2 AA2 6 VAL A 226 VAL A 230 -1 O VAL A 228 N ARG A 152 SHEET 3 AA2 6 GLY A 163 ILE A 170 -1 N LEU A 166 O ARG A 229 SHEET 4 AA2 6 GLU A 194 ILE A 197 -1 O ILE A 195 N ALA A 165 SHEET 5 AA2 6 ILE A 207 GLN A 210 -1 O GLN A 210 N ASP A 196 SHEET 6 AA2 6 GLY A 215 LEU A 218 -1 O LEU A 218 N ILE A 207 SHEET 1 AA3 2 LEU B 54 VAL B 56 0 SHEET 2 AA3 2 LEU B 62 LEU B 64 -1 O GLU B 63 N THR B 55 SHEET 1 AA4 6 ARG B 152 ARG B 153 0 SHEET 2 AA4 6 VAL B 226 VAL B 230 -1 O VAL B 228 N ARG B 152 SHEET 3 AA4 6 GLY B 163 ILE B 170 -1 N LEU B 166 O ARG B 229 SHEET 4 AA4 6 GLU B 194 ILE B 197 -1 O ILE B 197 N GLY B 163 SHEET 5 AA4 6 ILE B 207 GLY B 211 -1 O GLN B 210 N ASP B 196 SHEET 6 AA4 6 GLY B 214 LEU B 218 -1 O GLY B 214 N GLY B 211 LINK C ALA A 101 N CSD A 102 1555 1555 1.34 LINK C CSD A 102 N ARG A 103 1555 1555 1.34 LINK C ALA B 101 N CSD B 102 1555 1555 1.34 LINK C CSD B 102 N ARG B 103 1555 1555 1.34 LINK SD MET A 10 CO CO A 301 1555 1555 2.49 LINK NE2 HIS A 79 CO CO A 302 1555 1555 2.11 LINK OE2 GLU A 83 CO CO A 302 1555 1555 1.92 LINK ND1 HIS A 98 CO CO A 302 1555 1555 2.15 LINK O CSD A 102 CO CO A 301 1555 1555 2.02 LINK OD2 CSD A 102 CO CO A 301 1555 1555 2.15 LINK OE2 GLU A 105 CO CO A 301 1555 1555 1.93 LINK NE2 HIS A 106 CO CO A 301 1555 1555 2.23 LINK OE2 GLU A 172 CO CO A 302 1555 1555 1.85 LINK OE1 GLN A 175 CO CO A 302 1555 1555 2.27 LINK CO CO A 301 O HOH A 407 1555 1555 2.04 LINK SD MET B 10 CO CO B 301 1555 1555 2.45 LINK NE2 HIS B 79 CO CO B 302 1555 1555 2.20 LINK OE2 GLU B 83 CO CO B 302 1555 1555 1.95 LINK ND1 HIS B 98 CO CO B 302 1555 1555 2.01 LINK O CSD B 102 CO CO B 301 1555 1555 2.02 LINK OD2 CSD B 102 CO CO B 301 1555 1555 2.15 LINK OE2 GLU B 105 CO CO B 301 1555 1555 1.90 LINK NE2 HIS B 106 CO CO B 301 1555 1555 2.13 LINK OE2 GLU B 172 CO CO B 302 1555 1555 1.98 LINK OE1 GLN B 175 CO CO B 302 1555 1555 2.24 LINK CO CO B 301 O HOH B 410 1555 1555 2.13 CRYST1 43.888 45.564 66.275 109.12 93.20 113.98 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022785 0.010133 0.005593 0.00000 SCALE2 0.000000 0.024019 0.009988 0.00000 SCALE3 0.000000 0.000000 0.016367 0.00000 HETATM 763 N CSD A 102 0.253 2.910 -9.309 1.00 21.07 N HETATM 764 CA CSD A 102 1.687 3.012 -9.095 1.00 21.33 C HETATM 765 CB CSD A 102 2.369 1.651 -9.265 1.00 21.91 C HETATM 766 SG CSD A 102 3.480 1.345 -7.865 1.00 22.92 S HETATM 767 C CSD A 102 2.310 4.046 -10.034 1.00 21.12 C HETATM 768 O CSD A 102 3.334 4.641 -9.704 1.00 20.59 O HETATM 769 OD1 CSD A 102 3.906 -0.067 -7.996 1.00 23.07 O HETATM 770 OD2 CSD A 102 4.771 2.257 -8.082 1.00 22.33 O TER 1718 LYS A 231 HETATM 2514 N CSD B 102 -1.602 16.480 -19.730 1.00 21.34 N HETATM 2515 CA CSD B 102 -0.260 16.511 -20.291 1.00 21.74 C HETATM 2516 CB CSD B 102 0.294 17.939 -20.328 1.00 22.33 C HETATM 2517 SG CSD B 102 1.078 18.231 -21.936 1.00 23.01 S HETATM 2518 C CSD B 102 0.684 15.585 -19.522 1.00 21.72 C HETATM 2519 O CSD B 102 1.700 15.160 -20.067 1.00 22.08 O HETATM 2520 OD1 CSD B 102 1.319 19.688 -22.016 1.00 23.07 O HETATM 2521 OD2 CSD B 102 2.477 17.472 -21.857 1.00 22.94 O TER 3422 LYS B 231 HETATM 3423 CO CO A 301 4.765 4.397 -8.304 1.00 18.98 CO HETATM 3424 CO CO A 302 -1.898 0.153 -4.140 1.00 23.15 CO HETATM 3425 CO CO B 301 2.731 15.338 -21.791 1.00 20.97 CO HETATM 3426 CO CO B 302 -4.918 19.188 -24.307 1.00 22.13 CO HETATM 3427 O HOH A 401 -3.901 -16.154 18.368 1.00 35.31 O HETATM 3428 O HOH A 402 -9.092 21.605 -7.050 1.00 29.08 O HETATM 3429 O HOH A 403 -9.898 -0.434 6.564 1.00 37.07 O HETATM 3430 O HOH A 404 -4.045 0.354 -1.079 1.00 28.58 O HETATM 3431 O HOH A 405 2.914 -1.718 1.648 1.00 36.12 O HETATM 3432 O HOH A 406 -14.942 17.093 -8.164 1.00 32.16 O HETATM 3433 O HOH A 407 5.880 3.920 -9.947 1.00 24.83 O HETATM 3434 O HOH A 408 3.914 14.190 -4.208 1.00 21.83 O HETATM 3435 O HOH A 409 6.923 13.110 -10.800 1.00 35.28 O HETATM 3436 O HOH A 410 3.569 12.431 -7.002 1.00 25.47 O HETATM 3437 O HOH A 411 -13.390 5.446 2.487 1.00 18.26 O HETATM 3438 O HOH A 412 -5.185 11.665 6.198 1.00 18.91 O HETATM 3439 O HOH A 413 -0.902 -0.861 -15.890 1.00 33.81 O HETATM 3440 O HOH A 414 0.273 9.524 8.290 1.00 28.04 O HETATM 3441 O HOH A 415 4.026 -1.189 -4.955 1.00 24.27 O HETATM 3442 O HOH A 416 -1.443 11.452 7.379 1.00 29.81 O HETATM 3443 O HOH A 417 2.452 14.497 -8.724 1.00 26.27 O HETATM 3444 O HOH A 418 3.325 15.481 -11.019 1.00 37.48 O HETATM 3445 O HOH A 419 -2.219 21.618 -7.508 1.00 23.05 O HETATM 3446 O HOH A 420 10.180 -1.920 -10.259 1.00 30.88 O HETATM 3447 O HOH A 421 7.200 -0.425 -7.697 1.00 27.19 O HETATM 3448 O HOH A 422 -0.028 13.915 7.200 1.00 27.14 O HETATM 3449 O HOH A 423 6.909 -0.975 -4.265 1.00 32.86 O HETATM 3450 O HOH A 424 -11.788 -2.764 9.413 1.00 37.35 O HETATM 3451 O HOH A 425 -11.115 -1.868 11.717 1.00 32.64 O HETATM 3452 O HOH B 401 -9.877 7.503 -33.429 1.00 33.21 O HETATM 3453 O HOH B 402 -7.531 18.608 -26.646 1.00 25.37 O HETATM 3454 O HOH B 403 -5.667 13.663 -34.251 1.00 21.64 O HETATM 3455 O HOH B 404 -9.021 23.210 -9.209 1.00 35.94 O HETATM 3456 O HOH B 405 10.616 18.906 -48.161 1.00 30.78 O HETATM 3457 O HOH B 406 -3.605 -2.412 -28.879 1.00 31.47 O HETATM 3458 O HOH B 407 -9.969 45.022 -38.974 1.00 38.90 O HETATM 3459 O HOH B 408 -19.269 40.510 -28.856 1.00 31.17 O HETATM 3460 O HOH B 409 -17.799 39.228 -39.208 1.00 46.22 O HETATM 3461 O HOH B 410 4.306 16.070 -20.561 1.00 29.31 O HETATM 3462 O HOH B 411 14.852 19.018 -51.051 1.00 34.30 O HETATM 3463 O HOH B 412 1.581 7.096 -23.065 1.00 17.75 O HETATM 3464 O HOH B 413 26.099 13.215 -28.889 1.00 41.10 O HETATM 3465 O HOH B 414 1.040 20.446 -24.627 1.00 29.24 O HETATM 3466 O HOH B 415 -10.030 41.254 -36.990 1.00 29.77 O HETATM 3467 O HOH B 416 -1.305 4.013 -32.732 1.00 41.46 O HETATM 3468 O HOH B 417 4.782 5.819 -21.336 1.00 28.43 O HETATM 3469 O HOH B 418 -18.574 29.893 -22.537 1.00 32.84 O HETATM 3470 O HOH B 419 -12.592 10.285 -33.053 1.00 32.36 O HETATM 3471 O HOH B 420 12.033 4.854 -28.318 1.00 34.77 O HETATM 3472 O HOH B 421 -6.314 20.808 -33.232 1.00 33.82 O HETATM 3473 O HOH B 422 -19.714 32.899 -28.379 1.00 24.67 O HETATM 3474 O HOH B 423 -19.541 41.663 -22.236 1.00 21.31 O HETATM 3475 O HOH B 424 -4.172 21.001 -13.492 1.00 32.77 O HETATM 3476 O HOH B 425 -23.799 34.001 -30.571 1.00 37.49 O HETATM 3477 O HOH B 426 11.023 15.578 -18.196 1.00 36.20 O HETATM 3478 O HOH B 427 7.970 15.445 -44.616 1.00 44.55 O HETATM 3479 O HOH B 428 -7.021 23.186 -20.080 1.00 19.26 O HETATM 3480 O HOH B 429 -0.108 20.404 -41.447 1.00 33.08 O HETATM 3481 O HOH B 430 -15.685 26.726 -42.442 1.00 24.89 O HETATM 3482 O HOH B 431 -19.560 34.730 -19.344 1.00 31.87 O HETATM 3483 O HOH B 432 -2.224 2.465 -29.969 1.00 34.66 O HETATM 3484 O HOH B 433 1.775 5.970 -25.501 1.00 27.60 O HETATM 3485 O HOH B 434 -16.721 25.516 -20.980 1.00 46.45 O HETATM 3486 O HOH B 435 -1.641 20.318 -13.079 1.00 18.38 O HETATM 3487 O HOH B 436 4.350 18.402 -38.295 1.00 34.75 O HETATM 3488 O HOH B 437 -0.207 1.851 -24.517 1.00 26.71 O HETATM 3489 O HOH B 438 3.766 5.830 -27.381 1.00 21.06 O HETATM 3490 O HOH B 439 2.168 -0.963 -40.901 1.00 27.09 O HETATM 3491 O HOH B 440 2.037 2.835 -24.359 1.00 23.97 O HETATM 3492 O HOH B 441 -17.856 20.870 -37.066 1.00 39.73 O HETATM 3493 O HOH B 442 -19.397 20.793 -34.878 1.00 38.75 O CONECT 62 3423 CONECT 580 3424 CONECT 613 3424 CONECT 737 3424 CONECT 760 763 CONECT 763 760 764 CONECT 764 763 765 767 CONECT 765 764 766 CONECT 766 765 769 770 CONECT 767 764 768 771 CONECT 768 767 3423 CONECT 769 766 CONECT 770 766 3423 CONECT 771 767 CONECT 804 3423 CONECT 814 3423 CONECT 1301 3424 CONECT 1326 3424 CONECT 1780 3425 CONECT 2331 3426 CONECT 2364 3426 CONECT 2488 3426 CONECT 2511 2514 CONECT 2514 2511 2515 CONECT 2515 2514 2516 2518 CONECT 2516 2515 2517 CONECT 2517 2516 2520 2521 CONECT 2518 2515 2519 2522 CONECT 2519 2518 3425 CONECT 2520 2517 CONECT 2521 2517 3425 CONECT 2522 2518 CONECT 2555 3425 CONECT 2565 3425 CONECT 2989 3426 CONECT 3014 3426 CONECT 3423 62 768 770 804 CONECT 3423 814 3433 CONECT 3424 580 613 737 1301 CONECT 3424 1326 CONECT 3425 1780 2519 2521 2555 CONECT 3425 2565 3461 CONECT 3426 2331 2364 2488 2989 CONECT 3426 3014 CONECT 3433 3423 CONECT 3461 3425 MASTER 333 0 6 21 16 0 0 6 3491 2 46 36 END