HEADER TRANSFERASE 28-NOV-20 7B35 TITLE MST3 IN COMPLEX WITH COMPOUND MRIA13 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE 24; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MAMMALIAN STE20-LIKE PROTEIN KINASE 3,MST-3,STE20-LIKE COMPND 5 KINASE MST3; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: STK24, MST3, STK3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE INHIBITORS, STRUCTURE-BASED DRUG DESIGN, SIK2 INHIBITOR, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.TESCH,M.RAK,A.C.JOERGER,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 2 (SGC) REVDAT 4 31-JAN-24 7B35 1 REMARK REVDAT 3 07-JUL-21 7B35 1 JRNL REVDAT 2 23-JUN-21 7B35 1 JRNL REVDAT 1 16-DEC-20 7B35 0 JRNL AUTH R.TESCH,M.RAK,M.RAAB,L.M.BERGER,T.KRONENBERGER,A.C.JOERGER, JRNL AUTH 2 B.T.BERGER,I.ABDI,T.HANKE,A.POSO,K.STREBHARDT,M.SANHAJI, JRNL AUTH 3 S.KNAPP JRNL TITL STRUCTURE-BASED DESIGN OF SELECTIVE SALT-INDUCIBLE KINASE JRNL TITL 2 INHIBITORS. JRNL REF J.MED.CHEM. V. 64 8142 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34086472 JRNL DOI 10.1021/ACS.JMEDCHEM.0C02144 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.349 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 24402 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.914 REMARK 3 FREE R VALUE TEST SET COUNT : 1199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8982 - 4.9906 0.99 2637 145 0.1726 0.2109 REMARK 3 2 4.9906 - 3.9618 0.98 2582 122 0.1630 0.2112 REMARK 3 3 3.9618 - 3.4612 1.00 2592 130 0.1917 0.2293 REMARK 3 4 3.4612 - 3.1448 1.00 2594 138 0.2263 0.3136 REMARK 3 5 3.1448 - 2.9194 1.00 2578 117 0.2377 0.3757 REMARK 3 6 2.9194 - 2.7473 1.00 2605 129 0.2496 0.2952 REMARK 3 7 2.7473 - 2.6097 0.99 2582 130 0.2570 0.3144 REMARK 3 8 2.6097 - 2.4961 0.97 2503 140 0.2686 0.3216 REMARK 3 9 2.4961 - 2.4001 0.99 2530 148 0.2681 0.3376 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.319 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.573 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.64 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4179 REMARK 3 ANGLE : 0.667 5699 REMARK 3 CHIRALITY : 0.045 652 REMARK 3 PLANARITY : 0.005 780 REMARK 3 DIHEDRAL : 15.213 2535 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2583 39.7223 13.4351 REMARK 3 T TENSOR REMARK 3 T11: 0.7511 T22: 0.2895 REMARK 3 T33: 0.4507 T12: 0.0044 REMARK 3 T13: 0.1235 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 7.8115 L22: 6.1846 REMARK 3 L33: 8.9776 L12: 0.1696 REMARK 3 L13: 2.6255 L23: -1.0816 REMARK 3 S TENSOR REMARK 3 S11: 0.8348 S12: 0.2073 S13: 0.0205 REMARK 3 S21: 0.5221 S22: -0.0379 S23: -0.3313 REMARK 3 S31: -0.7835 S32: -0.1307 S33: -0.6785 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 56 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8625 25.4934 17.1552 REMARK 3 T TENSOR REMARK 3 T11: 0.5479 T22: 0.2427 REMARK 3 T33: 0.3507 T12: -0.0007 REMARK 3 T13: 0.0940 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: 1.4912 L22: 3.3396 REMARK 3 L33: 2.3969 L12: -0.8849 REMARK 3 L13: 0.7260 L23: -1.9425 REMARK 3 S TENSOR REMARK 3 S11: -0.0839 S12: 0.0395 S13: -0.0207 REMARK 3 S21: 0.3100 S22: 0.1626 S23: 0.2448 REMARK 3 S31: -0.3039 S32: -0.0331 S33: -0.0598 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3961 11.3519 21.3058 REMARK 3 T TENSOR REMARK 3 T11: 0.5408 T22: 0.2610 REMARK 3 T33: 0.2998 T12: -0.0066 REMARK 3 T13: 0.0383 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.2880 L22: 2.6990 REMARK 3 L33: 2.0041 L12: -0.8459 REMARK 3 L13: -0.8991 L23: 0.1414 REMARK 3 S TENSOR REMARK 3 S11: -0.0310 S12: -0.1345 S13: -0.0392 REMARK 3 S21: 0.2473 S22: 0.1043 S23: 0.0565 REMARK 3 S31: -0.0256 S32: 0.1325 S33: -0.0846 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7393 7.3073 52.7155 REMARK 3 T TENSOR REMARK 3 T11: 0.5378 T22: 0.2676 REMARK 3 T33: 0.4644 T12: -0.0053 REMARK 3 T13: 0.1063 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 3.9915 L22: 3.5321 REMARK 3 L33: 8.2727 L12: -0.4245 REMARK 3 L13: 1.3541 L23: 0.9673 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: -0.2366 S13: -0.0563 REMARK 3 S21: -0.2109 S22: -0.0295 S23: -0.2907 REMARK 3 S31: 0.4292 S32: 0.1223 S33: -0.1488 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 76 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.1312 21.6942 44.7876 REMARK 3 T TENSOR REMARK 3 T11: 0.4936 T22: 0.2425 REMARK 3 T33: 0.3424 T12: 0.0385 REMARK 3 T13: 0.0456 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 1.1854 L22: 2.9920 REMARK 3 L33: 2.6905 L12: 0.8919 REMARK 3 L13: -0.8167 L23: -1.4357 REMARK 3 S TENSOR REMARK 3 S11: -0.0826 S12: 0.0555 S13: -0.0880 REMARK 3 S21: -0.1754 S22: -0.0017 S23: 0.0837 REMARK 3 S31: 0.3157 S32: -0.1198 S33: 0.0985 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 173 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.2844 32.9113 53.3055 REMARK 3 T TENSOR REMARK 3 T11: 0.6751 T22: 0.4379 REMARK 3 T33: 0.3278 T12: 0.0409 REMARK 3 T13: 0.0741 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 6.7250 L22: 2.6247 REMARK 3 L33: 1.5022 L12: 3.6197 REMARK 3 L13: -0.6204 L23: -1.1299 REMARK 3 S TENSOR REMARK 3 S11: 0.1223 S12: -0.7274 S13: -0.0365 REMARK 3 S21: 0.3430 S22: -0.1320 S23: 0.2840 REMARK 3 S31: -0.2203 S32: 0.1211 S33: 0.0311 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 210 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.0026 34.4199 39.5583 REMARK 3 T TENSOR REMARK 3 T11: 0.5650 T22: 0.2532 REMARK 3 T33: 0.3186 T12: 0.0302 REMARK 3 T13: 0.1047 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 2.1911 L22: 1.1329 REMARK 3 L33: 2.5254 L12: 0.2964 REMARK 3 L13: 1.0610 L23: 0.7474 REMARK 3 S TENSOR REMARK 3 S11: 0.0434 S12: 0.0847 S13: 0.2033 REMARK 3 S21: -0.1248 S22: -0.0343 S23: 0.0130 REMARK 3 S31: -0.1950 S32: 0.1788 S33: -0.0094 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7B35 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1292112472. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24436 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 47.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3ZHP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 10 MG/ML IN BUFFER REMARK 280 25 MM HEPES PH 7.5, 200 MM NACL, 5% GLYCEROL, 0.5 MM TCEP. REMARK 280 RESERVOIR: 24% PEG 3550, 0.1M CITRATE PH 5.6., VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.60500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 ARG A 4 REMARK 465 ALA A 5 REMARK 465 GLN A 6 REMARK 465 LEU A 7 REMARK 465 TRP A 8 REMARK 465 GLY A 9 REMARK 465 LEU A 10 REMARK 465 ALA A 11 REMARK 465 LEU A 12 REMARK 465 ASN A 13 REMARK 465 LYS A 14 REMARK 465 ARG A 15 REMARK 465 ARG A 16 REMARK 465 ALA A 17 REMARK 465 THR A 18 REMARK 465 LEU A 19 REMARK 465 PRO A 20 REMARK 465 HIS A 21 REMARK 465 PRO A 22 REMARK 465 GLY A 23 REMARK 465 GLY A 24 REMARK 465 SER A 25 REMARK 465 GLY A 179 REMARK 465 GLN A 180 REMARK 465 LEU A 181 REMARK 465 THR A 182 REMARK 465 ASP A 183 REMARK 465 THR A 184 REMARK 465 GLN A 185 REMARK 465 ILE A 186 REMARK 465 LYS A 187 REMARK 465 ARG A 188 REMARK 465 ASN A 189 REMARK 465 THR A 190 REMARK 465 PHE A 191 REMARK 465 VAL A 192 REMARK 465 GLY A 193 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS A 308 REMARK 465 MET B 3 REMARK 465 ARG B 4 REMARK 465 ALA B 5 REMARK 465 GLN B 6 REMARK 465 LEU B 7 REMARK 465 TRP B 8 REMARK 465 GLY B 9 REMARK 465 LEU B 10 REMARK 465 ALA B 11 REMARK 465 LEU B 12 REMARK 465 ASN B 13 REMARK 465 LYS B 14 REMARK 465 ARG B 15 REMARK 465 ARG B 16 REMARK 465 ALA B 17 REMARK 465 THR B 18 REMARK 465 LEU B 19 REMARK 465 PRO B 20 REMARK 465 HIS B 21 REMARK 465 PRO B 22 REMARK 465 GLY B 23 REMARK 465 GLY B 24 REMARK 465 SER B 25 REMARK 465 GLY B 179 REMARK 465 GLN B 180 REMARK 465 LEU B 181 REMARK 465 THR B 182 REMARK 465 ASP B 183 REMARK 465 THR B 184 REMARK 465 GLN B 185 REMARK 465 ILE B 186 REMARK 465 LYS B 187 REMARK 465 ARG B 188 REMARK 465 ASN B 189 REMARK 465 THR B 190 REMARK 465 PHE B 191 REMARK 465 VAL B 192 REMARK 465 GLY B 193 REMARK 465 HIS B 305 REMARK 465 HIS B 306 REMARK 465 HIS B 307 REMARK 465 HIS B 308 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 26 OG1 CG2 REMARK 470 ASN A 27 CG OD1 ND2 REMARK 470 LEU A 28 CG CD1 CD2 REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 ARG A 57 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 GLU A 71 CG CD OE1 OE2 REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 ASP A 74 CG OD1 OD2 REMARK 470 LYS A 96 CG CD CE NZ REMARK 470 LEU A 123 CG CD1 CD2 REMARK 470 GLU A 124 CG CD OE1 OE2 REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 LYS A 204 CD CE NZ REMARK 470 GLN A 205 CG CD OE1 NE2 REMARK 470 GLU A 233 CG CD OE1 OE2 REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 LYS A 284 CG CD CE NZ REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 LEU B 28 CG CD1 CD2 REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 LYS B 38 CE NZ REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 ARG B 57 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 GLU B 71 CG CD OE1 OE2 REMARK 470 GLU B 73 CG CD OE1 OE2 REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 470 LYS B 96 CG CD CE NZ REMARK 470 GLU B 124 CG CD OE1 OE2 REMARK 470 LYS B 151 CD CE NZ REMARK 470 LYS B 204 CG CD CE NZ REMARK 470 GLN B 205 CG CD OE1 NE2 REMARK 470 ARG B 226 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 233 CG CD OE1 OE2 REMARK 470 LYS B 238 CG CD CE NZ REMARK 470 GLU B 252 CG CD OE1 OE2 REMARK 470 LYS B 257 CG CD CE NZ REMARK 470 LYS B 278 CG CD CE NZ REMARK 470 LYS B 282 CG CD CE NZ REMARK 470 LYS B 284 CG CD CE NZ REMARK 470 LYS B 291 CG CD CE NZ REMARK 470 LYS B 292 CG CD CE NZ REMARK 470 GLU B 298 CG CD OE1 OE2 REMARK 470 HIS B 303 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 304 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 59 23.27 49.14 REMARK 500 ALA A 72 50.05 -146.78 REMARK 500 ASP A 104 -108.16 51.38 REMARK 500 ARG A 155 -1.43 76.32 REMARK 500 ASP A 156 54.10 -153.94 REMARK 500 LYS A 204 26.66 -77.46 REMARK 500 GLN A 205 27.44 45.98 REMARK 500 ASP A 209 -153.38 -123.81 REMARK 500 LEU B 39 -149.08 -98.83 REMARK 500 PHE B 47 -18.56 76.08 REMARK 500 ALA B 72 -87.75 -134.99 REMARK 500 GLU B 73 -59.56 71.54 REMARK 500 ASP B 104 -125.32 51.21 REMARK 500 ARG B 155 -3.83 75.90 REMARK 500 ASP B 156 51.07 -154.14 REMARK 500 ASP B 209 -165.20 -118.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SQB A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SQB B 401 DBREF 7B35 A 4 301 UNP Q9Y6E0 STK24_HUMAN 4 301 DBREF 7B35 B 4 301 UNP Q9Y6E0 STK24_HUMAN 4 301 SEQADV 7B35 MET A 3 UNP Q9Y6E0 INITIATING METHIONINE SEQADV 7B35 ALA A 302 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS A 303 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS A 304 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS A 305 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS A 306 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS A 307 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS A 308 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 MET B 3 UNP Q9Y6E0 INITIATING METHIONINE SEQADV 7B35 ALA B 302 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS B 303 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS B 304 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS B 305 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS B 306 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS B 307 UNP Q9Y6E0 EXPRESSION TAG SEQADV 7B35 HIS B 308 UNP Q9Y6E0 EXPRESSION TAG SEQRES 1 A 306 MET ARG ALA GLN LEU TRP GLY LEU ALA LEU ASN LYS ARG SEQRES 2 A 306 ARG ALA THR LEU PRO HIS PRO GLY GLY SER THR ASN LEU SEQRES 3 A 306 LYS ALA ASP PRO GLU GLU LEU PHE THR LYS LEU GLU LYS SEQRES 4 A 306 ILE GLY LYS GLY SER PHE GLY GLU VAL PHE LYS GLY ILE SEQRES 5 A 306 ASP ASN ARG THR GLN LYS VAL VAL ALA ILE LYS ILE ILE SEQRES 6 A 306 ASP LEU GLU GLU ALA GLU ASP GLU ILE GLU ASP ILE GLN SEQRES 7 A 306 GLN GLU ILE THR VAL LEU SER GLN CYS ASP SER PRO TYR SEQRES 8 A 306 VAL THR LYS TYR TYR GLY SER TYR LEU LYS ASP THR LYS SEQRES 9 A 306 LEU TRP ILE ILE MET GLU TYR LEU GLY GLY GLY SER ALA SEQRES 10 A 306 LEU ASP LEU LEU GLU PRO GLY PRO LEU ASP GLU THR GLN SEQRES 11 A 306 ILE ALA THR ILE LEU ARG GLU ILE LEU LYS GLY LEU ASP SEQRES 12 A 306 TYR LEU HIS SER GLU LYS LYS ILE HIS ARG ASP ILE LYS SEQRES 13 A 306 ALA ALA ASN VAL LEU LEU SER GLU HIS GLY GLU VAL LYS SEQRES 14 A 306 LEU ALA ASP PHE GLY VAL ALA GLY GLN LEU THR ASP THR SEQRES 15 A 306 GLN ILE LYS ARG ASN THR PHE VAL GLY THR PRO PHE TRP SEQRES 16 A 306 MET ALA PRO GLU VAL ILE LYS GLN SER ALA TYR ASP SER SEQRES 17 A 306 LYS ALA ASP ILE TRP SER LEU GLY ILE THR ALA ILE GLU SEQRES 18 A 306 LEU ALA ARG GLY GLU PRO PRO HIS SER GLU LEU HIS PRO SEQRES 19 A 306 MET LYS VAL LEU PHE LEU ILE PRO LYS ASN ASN PRO PRO SEQRES 20 A 306 THR LEU GLU GLY ASN TYR SER LYS PRO LEU LYS GLU PHE SEQRES 21 A 306 VAL GLU ALA CYS LEU ASN LYS GLU PRO SER PHE ARG PRO SEQRES 22 A 306 THR ALA LYS GLU LEU LEU LYS HIS LYS PHE ILE LEU ARG SEQRES 23 A 306 ASN ALA LYS LYS THR SER TYR LEU THR GLU LEU ILE ASP SEQRES 24 A 306 ALA HIS HIS HIS HIS HIS HIS SEQRES 1 B 306 MET ARG ALA GLN LEU TRP GLY LEU ALA LEU ASN LYS ARG SEQRES 2 B 306 ARG ALA THR LEU PRO HIS PRO GLY GLY SER THR ASN LEU SEQRES 3 B 306 LYS ALA ASP PRO GLU GLU LEU PHE THR LYS LEU GLU LYS SEQRES 4 B 306 ILE GLY LYS GLY SER PHE GLY GLU VAL PHE LYS GLY ILE SEQRES 5 B 306 ASP ASN ARG THR GLN LYS VAL VAL ALA ILE LYS ILE ILE SEQRES 6 B 306 ASP LEU GLU GLU ALA GLU ASP GLU ILE GLU ASP ILE GLN SEQRES 7 B 306 GLN GLU ILE THR VAL LEU SER GLN CYS ASP SER PRO TYR SEQRES 8 B 306 VAL THR LYS TYR TYR GLY SER TYR LEU LYS ASP THR LYS SEQRES 9 B 306 LEU TRP ILE ILE MET GLU TYR LEU GLY GLY GLY SER ALA SEQRES 10 B 306 LEU ASP LEU LEU GLU PRO GLY PRO LEU ASP GLU THR GLN SEQRES 11 B 306 ILE ALA THR ILE LEU ARG GLU ILE LEU LYS GLY LEU ASP SEQRES 12 B 306 TYR LEU HIS SER GLU LYS LYS ILE HIS ARG ASP ILE LYS SEQRES 13 B 306 ALA ALA ASN VAL LEU LEU SER GLU HIS GLY GLU VAL LYS SEQRES 14 B 306 LEU ALA ASP PHE GLY VAL ALA GLY GLN LEU THR ASP THR SEQRES 15 B 306 GLN ILE LYS ARG ASN THR PHE VAL GLY THR PRO PHE TRP SEQRES 16 B 306 MET ALA PRO GLU VAL ILE LYS GLN SER ALA TYR ASP SER SEQRES 17 B 306 LYS ALA ASP ILE TRP SER LEU GLY ILE THR ALA ILE GLU SEQRES 18 B 306 LEU ALA ARG GLY GLU PRO PRO HIS SER GLU LEU HIS PRO SEQRES 19 B 306 MET LYS VAL LEU PHE LEU ILE PRO LYS ASN ASN PRO PRO SEQRES 20 B 306 THR LEU GLU GLY ASN TYR SER LYS PRO LEU LYS GLU PHE SEQRES 21 B 306 VAL GLU ALA CYS LEU ASN LYS GLU PRO SER PHE ARG PRO SEQRES 22 B 306 THR ALA LYS GLU LEU LEU LYS HIS LYS PHE ILE LEU ARG SEQRES 23 B 306 ASN ALA LYS LYS THR SER TYR LEU THR GLU LEU ILE ASP SEQRES 24 B 306 ALA HIS HIS HIS HIS HIS HIS HET SQB A 401 37 HET SQB B 401 37 HETNAM SQB 8-[(5-AZANYL-1,3-DIOXAN-2-YL)METHYL]-6-[2-CHLORANYL-4- HETNAM 2 SQB (3-METHOXY-6-METHYL-PYRIDIN-2-YL)PHENYL]-2- HETNAM 3 SQB (METHYLAMINO)PYRIDO[2,3-D]PYRIMIDIN-7-ONE FORMUL 3 SQB 2(C26 H27 CL N6 O4) FORMUL 5 HOH *49(H2 O) HELIX 1 AA1 ASP A 31 LEU A 35 1 5 HELIX 2 AA2 GLU A 70 ASP A 74 5 5 HELIX 3 AA3 GLU A 75 GLN A 88 1 14 HELIX 4 AA4 ALA A 119 LEU A 123 1 5 HELIX 5 AA5 ASP A 129 GLU A 150 1 22 HELIX 6 AA6 LYS A 158 ALA A 160 5 3 HELIX 7 AA7 ALA A 199 LYS A 204 1 6 HELIX 8 AA8 ASP A 209 GLY A 227 1 19 HELIX 9 AA9 HIS A 235 ASN A 246 1 12 HELIX 10 AB1 SER A 256 LEU A 267 1 12 HELIX 11 AB2 GLU A 270 ARG A 274 5 5 HELIX 12 AB3 THR A 276 LEU A 281 1 6 HELIX 13 AB4 HIS A 283 ALA A 290 1 8 HELIX 14 AB5 LYS A 292 TYR A 295 5 4 HELIX 15 AB6 LEU A 296 HIS A 304 1 9 HELIX 16 AB7 ASP B 31 LEU B 35 1 5 HELIX 17 AB8 GLU B 75 CYS B 89 1 15 HELIX 18 AB9 LEU B 120 GLU B 124 5 5 HELIX 19 AC1 ASP B 129 GLU B 150 1 22 HELIX 20 AC2 LYS B 158 ALA B 160 5 3 HELIX 21 AC3 ALA B 199 LYS B 204 1 6 HELIX 22 AC4 ASP B 209 GLY B 227 1 19 HELIX 23 AC5 HIS B 235 ASN B 246 1 12 HELIX 24 AC6 SER B 256 LEU B 267 1 12 HELIX 25 AC7 GLU B 270 ARG B 274 5 5 HELIX 26 AC8 THR B 276 LEU B 281 1 6 HELIX 27 AC9 HIS B 283 ALA B 290 1 8 HELIX 28 AD1 LYS B 292 SER B 294 5 3 HELIX 29 AD2 TYR B 295 HIS B 303 1 9 SHEET 1 AA1 5 PHE A 36 LYS A 44 0 SHEET 2 AA1 5 GLU A 49 ASP A 55 -1 O LYS A 52 N LEU A 39 SHEET 3 AA1 5 VAL A 61 ASP A 68 -1 O VAL A 62 N GLY A 53 SHEET 4 AA1 5 LYS A 106 GLU A 112 -1 O ILE A 109 N LYS A 65 SHEET 5 AA1 5 TYR A 97 LYS A 103 -1 N TYR A 101 O TRP A 108 SHEET 1 AA2 3 GLY A 117 SER A 118 0 SHEET 2 AA2 3 VAL A 162 LEU A 164 -1 O LEU A 164 N GLY A 117 SHEET 3 AA2 3 VAL A 170 LEU A 172 -1 O LYS A 171 N LEU A 163 SHEET 1 AA3 5 PHE B 36 LYS B 44 0 SHEET 2 AA3 5 GLU B 49 ASP B 55 -1 O LYS B 52 N GLU B 40 SHEET 3 AA3 5 VAL B 61 ASP B 68 -1 O VAL B 62 N GLY B 53 SHEET 4 AA3 5 LYS B 106 GLU B 112 -1 O MET B 111 N ALA B 63 SHEET 5 AA3 5 TYR B 97 LYS B 103 -1 N TYR B 101 O TRP B 108 SHEET 1 AA4 3 GLY B 117 SER B 118 0 SHEET 2 AA4 3 VAL B 162 LEU B 164 -1 O LEU B 164 N GLY B 117 SHEET 3 AA4 3 VAL B 170 LEU B 172 -1 O LYS B 171 N LEU B 163 SITE 1 AC1 18 PHE A 47 VAL A 50 ALA A 63 LYS A 65 SITE 2 AC1 18 ILE A 79 GLU A 82 ILE A 83 TYR A 97 SITE 3 AC1 18 ILE A 109 MET A 111 GLU A 112 TYR A 113 SITE 4 AC1 18 LEU A 114 ALA A 160 ASN A 161 LEU A 163 SITE 5 AC1 18 ASP A 174 HOH A 503 SITE 1 AC2 19 SER B 46 PHE B 47 VAL B 50 ALA B 63 SITE 2 AC2 19 LYS B 65 ILE B 79 GLU B 82 ILE B 83 SITE 3 AC2 19 LEU B 86 TYR B 97 ILE B 109 MET B 111 SITE 4 AC2 19 GLU B 112 LEU B 114 ALA B 160 ASN B 161 SITE 5 AC2 19 LEU B 163 ASP B 174 HOH B 503 CRYST1 55.875 93.210 61.303 90.00 92.19 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017897 0.000000 0.000685 0.00000 SCALE2 0.000000 0.010728 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016324 0.00000