HEADER HYDROLASE 07-DEC-20 7B5V TITLE THE CARBOHYDRATE BINDING MODULE FAMILY 48 (CBM48) AND CARBOXY-TERMINAL TITLE 2 CARBOHYDRATE ESTERASE FAMILY 1 (CE1) DOMAINS OF THE MULTIDOMAIN TITLE 3 ESTERASE DMCE1B FROM DYSGONOMONAS MOSSII COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBOHYDRATE ESTERASE FAMILY 1 PROTEIN WITH AN N-TERMINAL COMPND 3 CARBOHYDRATE BINDING MODULE FAMILY 48; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DYSGONOMONAS MOSSII DSM 22836; SOURCE 3 ORGANISM_TAXID: 742767; SOURCE 4 GENE: HMPREF9456_02279; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CARBOHYDRATE ESTERASE, CE1, CBM48, CARBOHYDRATE BINDING MODULE, CBM, KEYWDS 2 CE, PUL, LIGNIN, XYLAN, FERULATE, FEROUYL ESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.MAZURKEWICH,C.KMEZIK,G.BRANDEN,J.LARSBRINK REVDAT 4 31-JAN-24 7B5V 1 REMARK REVDAT 3 21-JUL-21 7B5V 1 JRNL REVDAT 2 17-MAR-21 7B5V 1 JRNL REVDAT 1 10-MAR-21 7B5V 0 JRNL AUTH C.KMEZIK,S.MAZURKEWICH,T.MEENTS,L.S.MCKEE,A.IDSTROM, JRNL AUTH 2 M.ARMENI,O.SAVOLAINEN,G.BRANDEN,J.LARSBRINK JRNL TITL A POLYSACCHARIDE UTILIZATION LOCUS FROM THE GUT BACTERIUM JRNL TITL 2 DYSGONOMONAS MOSSII ENCODES FUNCTIONALLY DISTINCT JRNL TITL 3 CARBOHYDRATE ESTERASES. JRNL REF J.BIOL.CHEM. V. 296 00500 2021 JRNL REFN ESSN 1083-351X JRNL PMID 33667545 JRNL DOI 10.1016/J.JBC.2021.100500 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 94391 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.500 REMARK 3 FREE R VALUE TEST SET COUNT : 7079 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0800 - 5.2700 0.99 3004 244 0.1367 0.2040 REMARK 3 2 5.2700 - 4.1800 1.00 2967 241 0.1048 0.1611 REMARK 3 3 4.1800 - 3.6500 1.00 2918 236 0.1286 0.1416 REMARK 3 4 3.6500 - 3.3200 1.00 2968 241 0.1510 0.2112 REMARK 3 5 3.3200 - 3.0800 1.00 2938 238 0.1678 0.2020 REMARK 3 6 3.0800 - 2.9000 1.00 2922 238 0.1810 0.2208 REMARK 3 7 2.9000 - 2.7500 1.00 2916 235 0.1833 0.2336 REMARK 3 8 2.7500 - 2.6300 1.00 2908 236 0.1847 0.2200 REMARK 3 9 2.6300 - 2.5300 1.00 2956 240 0.1893 0.2195 REMARK 3 10 2.5300 - 2.4500 1.00 2901 236 0.1839 0.2104 REMARK 3 11 2.4500 - 2.3700 1.00 2918 236 0.1790 0.2155 REMARK 3 12 2.3700 - 2.3000 1.00 2973 242 0.1758 0.2304 REMARK 3 13 2.3000 - 2.2400 1.00 2884 233 0.1805 0.2094 REMARK 3 14 2.2400 - 2.1900 1.00 2922 237 0.1793 0.2228 REMARK 3 15 2.1900 - 2.1400 1.00 2918 238 0.1747 0.2209 REMARK 3 16 2.1400 - 2.0900 1.00 2932 237 0.1787 0.2327 REMARK 3 17 2.0900 - 2.0500 1.00 2900 235 0.1784 0.2101 REMARK 3 18 2.0500 - 2.0100 1.00 2931 237 0.1845 0.2322 REMARK 3 19 2.0100 - 1.9700 1.00 2918 237 0.1968 0.2298 REMARK 3 20 1.9700 - 1.9400 1.00 2874 234 0.2156 0.2458 REMARK 3 21 1.9400 - 1.9100 1.00 2959 239 0.2405 0.2867 REMARK 3 22 1.9100 - 1.8800 1.00 2863 232 0.2338 0.2943 REMARK 3 23 1.8800 - 1.8500 1.00 2939 238 0.2374 0.2656 REMARK 3 24 1.8500 - 1.8300 1.00 2887 234 0.2481 0.2670 REMARK 3 25 1.8300 - 1.8000 1.00 2930 238 0.2609 0.2953 REMARK 3 26 1.8000 - 1.7800 1.00 2917 236 0.2819 0.2998 REMARK 3 27 1.7800 - 1.7600 1.00 2919 237 0.2938 0.3335 REMARK 3 28 1.7600 - 1.7400 1.00 2858 232 0.3128 0.2982 REMARK 3 29 1.7400 - 1.7200 1.00 2944 239 0.3259 0.3703 REMARK 3 30 1.7200 - 1.7000 0.87 2528 203 0.4008 0.4179 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.224 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5777 REMARK 3 ANGLE : 0.875 7827 REMARK 3 CHIRALITY : 0.061 814 REMARK 3 PLANARITY : 0.005 1030 REMARK 3 DIHEDRAL : 20.040 2118 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7B5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1292112713. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX IV REMARK 200 BEAMLINE : BIOMAX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94462 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.697 REMARK 200 RESOLUTION RANGE LOW (A) : 42.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.890 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AUTO-RICKSHAW, MORDA REMARK 200 STARTING MODEL: 6NE9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG - B9 - 0.1 M CITRATE PH 5, 20% REMARK 280 PEG 6000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.98100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.48300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.98100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.48300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 809 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 271 REMARK 465 GLY A 272 REMARK 465 SER A 273 REMARK 465 SER A 274 REMARK 465 HIS A 275 REMARK 465 HIS A 276 REMARK 465 HIS A 277 REMARK 465 HIS A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 SER A 281 REMARK 465 SER A 282 REMARK 465 GLU A 283 REMARK 465 ASN A 284 REMARK 465 LEU A 285 REMARK 465 TYR A 286 REMARK 465 PHE A 287 REMARK 465 GLN A 288 REMARK 465 GLY A 289 REMARK 465 HIS A 290 REMARK 465 SER A 291 REMARK 465 GLU A 292 REMARK 465 GLU A 293 REMARK 465 SER A 495 REMARK 465 ALA A 496 REMARK 465 ASN A 497 REMARK 465 SER A 498 REMARK 465 PRO A 499 REMARK 465 GLN A 500 REMARK 465 GLY A 501 REMARK 465 LEU A 502 REMARK 465 ARG A 503 REMARK 465 GLY A 504 REMARK 465 LEU A 505 REMARK 465 ILE A 571 REMARK 465 GLU A 572 REMARK 465 MET B 271 REMARK 465 GLY B 272 REMARK 465 SER B 273 REMARK 465 SER B 274 REMARK 465 HIS B 275 REMARK 465 HIS B 276 REMARK 465 HIS B 277 REMARK 465 HIS B 278 REMARK 465 HIS B 279 REMARK 465 HIS B 280 REMARK 465 SER B 281 REMARK 465 SER B 282 REMARK 465 GLU B 283 REMARK 465 ASN B 284 REMARK 465 LEU B 285 REMARK 465 TYR B 286 REMARK 465 PHE B 287 REMARK 465 GLN B 288 REMARK 465 GLY B 289 REMARK 465 HIS B 290 REMARK 465 SER B 291 REMARK 465 SER B 494 REMARK 465 SER B 495 REMARK 465 ALA B 496 REMARK 465 ASN B 497 REMARK 465 SER B 498 REMARK 465 PRO B 499 REMARK 465 GLN B 500 REMARK 465 GLY B 501 REMARK 465 LEU B 502 REMARK 465 ARG B 503 REMARK 465 GLY B 504 REMARK 465 LEU B 505 REMARK 465 PHE B 506 REMARK 465 GLN B 507 REMARK 465 ASN B 508 REMARK 465 GLU B 572 REMARK 465 GLN B 573 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU B 292 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 295 -41.06 -142.52 REMARK 500 ALA A 324 64.52 -159.92 REMARK 500 GLU A 343 -152.27 -122.63 REMARK 500 ASP A 397 21.24 -144.04 REMARK 500 ASN A 459 -81.99 -103.77 REMARK 500 ASP A 484 -169.76 -111.58 REMARK 500 GLU A 518 -54.48 -124.08 REMARK 500 SER A 542 -119.83 47.32 REMARK 500 ASN A 555 48.02 -142.81 REMARK 500 SER A 637 -150.63 -115.99 REMARK 500 ALA B 324 64.64 -157.88 REMARK 500 GLU B 345 30.03 -91.83 REMARK 500 ASP B 397 20.66 -146.76 REMARK 500 ASN B 459 -83.98 -103.79 REMARK 500 ASP B 484 -167.67 -116.60 REMARK 500 GLU B 518 -59.87 -123.60 REMARK 500 SER B 542 -122.15 49.25 REMARK 500 SER B 637 -151.53 -119.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1134 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH B1135 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH B1136 DISTANCE = 6.89 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 701 DBREF 7B5V A 292 656 UNP F8X1N1 F8X1N1_9BACT 292 656 DBREF 7B5V B 292 656 UNP F8X1N1 F8X1N1_9BACT 292 656 SEQADV 7B5V MET A 271 UNP F8X1N1 INITIATING METHIONINE SEQADV 7B5V GLY A 272 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER A 273 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER A 274 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS A 275 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS A 276 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS A 277 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS A 278 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS A 279 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS A 280 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER A 281 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER A 282 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V GLU A 283 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V ASN A 284 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V LEU A 285 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V TYR A 286 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V PHE A 287 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V GLN A 288 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V GLY A 289 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS A 290 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER A 291 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V MET B 271 UNP F8X1N1 INITIATING METHIONINE SEQADV 7B5V GLY B 272 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER B 273 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER B 274 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS B 275 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS B 276 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS B 277 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS B 278 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS B 279 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS B 280 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER B 281 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER B 282 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V GLU B 283 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V ASN B 284 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V LEU B 285 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V TYR B 286 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V PHE B 287 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V GLN B 288 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V GLY B 289 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V HIS B 290 UNP F8X1N1 EXPRESSION TAG SEQADV 7B5V SER B 291 UNP F8X1N1 EXPRESSION TAG SEQRES 1 A 386 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLU SEQRES 2 A 386 ASN LEU TYR PHE GLN GLY HIS SER GLU GLU ALA GLU VAL SEQRES 3 A 386 GLY ILE SER ALA SER THR ASN ILE PRO GLY ALA GLN TYR SEQRES 4 A 386 PRO GLN ILE LEU SER GLY ASN ARG VAL LEU PHE ARG ILE SEQRES 5 A 386 LYS ALA PRO ASP ALA LYS ARG VAL GLN VAL ASP LEU GLY SEQRES 6 A 386 LYS LYS TYR ASP MET VAL ARG GLU GLU GLU GLY SER TRP SEQRES 7 A 386 ALA ILE THR THR ASP PRO ILE VAL GLU GLY PHE HIS TYR SEQRES 8 A 386 TYR SER ILE LEU ILE ASP GLY VAL ALA VAL CYS ASP PRO SEQRES 9 A 386 ALA SER ARG THR PHE TYR GLY MET SER ARG MET ALA SER SEQRES 10 A 386 GLY ILE GLU ILE PRO GLU GLU GLY VAL ASP TYR TYR ASN SEQRES 11 A 386 LEU LYS ASN VAL PRO HIS GLY GLN ILE ARG GLN ILE ARG SEQRES 12 A 386 TYR PHE SER ASP VAL THR LYS ALA TRP ARG ARG ALA PHE SEQRES 13 A 386 VAL TYR THR PRO ALA GLY TYR ASP ALA ASN THR SER GLN SEQRES 14 A 386 ARG TYR PRO VAL LEU TYR LEU GLN HIS GLY GLY GLY GLU SEQRES 15 A 386 ASP GLU THR GLY TRP PRO ASN GLN GLY LYS MET ASP ALA SEQRES 16 A 386 ILE ILE ASP ASN LEU ILE ALA GLU GLY LYS ALA LYS PRO SEQRES 17 A 386 MET ILE VAL VAL MET ASP ASN GLY TYR ALA VAL ASP PRO SEQRES 18 A 386 SER ALA SER SER ALA ASN SER PRO GLN GLY LEU ARG GLY SEQRES 19 A 386 LEU PHE GLN ASN SER ALA LEU GLU LYS VAL PHE ILE ASN SEQRES 20 A 386 GLU ILE ILE PRO LEU VAL ASP LYS GLU PHE ARG THR ILE SEQRES 21 A 386 ALA ASP ARG ASP HIS ARG ALA MET ALA GLY LEU SER MET SEQRES 22 A 386 GLY GLY PHE GLN ALA PHE GLN ILE ALA MET THR ASN LEU SEQRES 23 A 386 ASP LYS PHE ALA TYR VAL GLY GLY PHE SER GLY GLY GLY SEQRES 24 A 386 ILE ILE GLU GLN GLY GLY ASP PHE SER LYS MET TYR ASN SEQRES 25 A 386 ASN VAL TRP SER ASP VAL ASP THR PHE ASN LYS ARG VAL SEQRES 26 A 386 LYS LEU ILE TYR LEU SER ILE GLY THR ALA GLU PRO THR SEQRES 27 A 386 ASN MET TYR GLN THR VAL ASN ASN PHE HIS LYS GLU PHE SEQRES 28 A 386 GLU LYS ALA GLY ILE LYS HIS VAL TYR TYR GLU SER PRO SEQRES 29 A 386 GLY THR SER HIS GLU TRP LEU THR TRP ARG ARG SER LEU SEQRES 30 A 386 ASN GLN PHE ALA GLU LEU LEU PHE LYS SEQRES 1 B 386 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLU SEQRES 2 B 386 ASN LEU TYR PHE GLN GLY HIS SER GLU GLU ALA GLU VAL SEQRES 3 B 386 GLY ILE SER ALA SER THR ASN ILE PRO GLY ALA GLN TYR SEQRES 4 B 386 PRO GLN ILE LEU SER GLY ASN ARG VAL LEU PHE ARG ILE SEQRES 5 B 386 LYS ALA PRO ASP ALA LYS ARG VAL GLN VAL ASP LEU GLY SEQRES 6 B 386 LYS LYS TYR ASP MET VAL ARG GLU GLU GLU GLY SER TRP SEQRES 7 B 386 ALA ILE THR THR ASP PRO ILE VAL GLU GLY PHE HIS TYR SEQRES 8 B 386 TYR SER ILE LEU ILE ASP GLY VAL ALA VAL CYS ASP PRO SEQRES 9 B 386 ALA SER ARG THR PHE TYR GLY MET SER ARG MET ALA SER SEQRES 10 B 386 GLY ILE GLU ILE PRO GLU GLU GLY VAL ASP TYR TYR ASN SEQRES 11 B 386 LEU LYS ASN VAL PRO HIS GLY GLN ILE ARG GLN ILE ARG SEQRES 12 B 386 TYR PHE SER ASP VAL THR LYS ALA TRP ARG ARG ALA PHE SEQRES 13 B 386 VAL TYR THR PRO ALA GLY TYR ASP ALA ASN THR SER GLN SEQRES 14 B 386 ARG TYR PRO VAL LEU TYR LEU GLN HIS GLY GLY GLY GLU SEQRES 15 B 386 ASP GLU THR GLY TRP PRO ASN GLN GLY LYS MET ASP ALA SEQRES 16 B 386 ILE ILE ASP ASN LEU ILE ALA GLU GLY LYS ALA LYS PRO SEQRES 17 B 386 MET ILE VAL VAL MET ASP ASN GLY TYR ALA VAL ASP PRO SEQRES 18 B 386 SER ALA SER SER ALA ASN SER PRO GLN GLY LEU ARG GLY SEQRES 19 B 386 LEU PHE GLN ASN SER ALA LEU GLU LYS VAL PHE ILE ASN SEQRES 20 B 386 GLU ILE ILE PRO LEU VAL ASP LYS GLU PHE ARG THR ILE SEQRES 21 B 386 ALA ASP ARG ASP HIS ARG ALA MET ALA GLY LEU SER MET SEQRES 22 B 386 GLY GLY PHE GLN ALA PHE GLN ILE ALA MET THR ASN LEU SEQRES 23 B 386 ASP LYS PHE ALA TYR VAL GLY GLY PHE SER GLY GLY GLY SEQRES 24 B 386 ILE ILE GLU GLN GLY GLY ASP PHE SER LYS MET TYR ASN SEQRES 25 B 386 ASN VAL TRP SER ASP VAL ASP THR PHE ASN LYS ARG VAL SEQRES 26 B 386 LYS LEU ILE TYR LEU SER ILE GLY THR ALA GLU PRO THR SEQRES 27 B 386 ASN MET TYR GLN THR VAL ASN ASN PHE HIS LYS GLU PHE SEQRES 28 B 386 GLU LYS ALA GLY ILE LYS HIS VAL TYR TYR GLU SER PRO SEQRES 29 B 386 GLY THR SER HIS GLU TRP LEU THR TRP ARG ARG SER LEU SEQRES 30 B 386 ASN GLN PHE ALA GLU LEU LEU PHE LYS HET CL A 701 1 HET PEG A 702 7 HET EDO B 701 4 HETNAM CL CHLORIDE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CL CL 1- FORMUL 4 PEG C4 H10 O3 FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *648(H2 O) HELIX 1 AA1 SER A 314 ASN A 316 5 3 HELIX 2 AA2 LYS A 462 GLU A 473 1 12 HELIX 3 AA3 ASN A 508 GLU A 518 1 11 HELIX 4 AA4 GLU A 518 PHE A 527 1 10 HELIX 5 AA5 ASP A 532 ASP A 534 5 3 HELIX 6 AA6 SER A 542 THR A 554 1 13 HELIX 7 AA7 ASP A 576 SER A 578 5 3 HELIX 8 AA8 LYS A 579 VAL A 584 1 6 HELIX 9 AA9 ASP A 587 VAL A 595 1 9 HELIX 10 AB1 PRO A 607 GLY A 625 1 19 HELIX 11 AB2 GLU A 639 LEU A 654 1 16 HELIX 12 AB3 LYS B 462 GLU B 473 1 12 HELIX 13 AB4 ALA B 510 GLU B 518 1 9 HELIX 14 AB5 GLU B 518 PHE B 527 1 10 HELIX 15 AB6 ASP B 532 ASP B 534 5 3 HELIX 16 AB7 SER B 542 THR B 554 1 13 HELIX 17 AB8 ASP B 576 SER B 578 5 3 HELIX 18 AB9 LYS B 579 VAL B 584 1 6 HELIX 19 AC1 ASP B 587 VAL B 595 1 9 HELIX 20 AC2 PRO B 607 GLY B 625 1 19 HELIX 21 AC3 GLU B 639 LEU B 654 1 16 SHEET 1 AA1 5 ILE A 298 SER A 299 0 SHEET 2 AA1 5 GLN A 311 ILE A 312 -1 O ILE A 312 N ILE A 298 SHEET 3 AA1 5 VAL A 318 LYS A 323 -1 O LEU A 319 N GLN A 311 SHEET 4 AA1 5 SER A 347 THR A 351 -1 O TRP A 348 N ILE A 322 SHEET 5 AA1 5 VAL A 341 ARG A 342 -1 N VAL A 341 O ALA A 349 SHEET 1 AA2 4 LYS A 337 ASP A 339 0 SHEET 2 AA2 4 VAL A 330 ASP A 333 -1 N VAL A 332 O TYR A 338 SHEET 3 AA2 4 GLY A 358 ILE A 366 -1 O SER A 363 N ASP A 333 SHEET 4 AA2 4 VAL A 369 VAL A 371 -1 O VAL A 371 N ILE A 364 SHEET 1 AA3 5 LYS A 337 ASP A 339 0 SHEET 2 AA3 5 VAL A 330 ASP A 333 -1 N VAL A 332 O TYR A 338 SHEET 3 AA3 5 GLY A 358 ILE A 366 -1 O SER A 363 N ASP A 333 SHEET 4 AA3 5 ARG A 384 ILE A 391 -1 O ILE A 391 N GLY A 358 SHEET 5 AA3 5 THR A 378 GLY A 381 -1 N PHE A 379 O ALA A 386 SHEET 1 AA416 VAL A 629 SER A 633 0 SHEET 2 AA416 LEU A 597 GLY A 603 1 N ILE A 598 O VAL A 629 SHEET 3 AA416 TYR A 561 PHE A 565 1 N GLY A 564 O TYR A 599 SHEET 4 AA416 ARG A 536 LEU A 541 1 N GLY A 540 O PHE A 565 SHEET 5 AA416 VAL A 443 GLN A 447 1 N TYR A 445 O ALA A 539 SHEET 6 AA416 ILE A 480 MET A 483 1 O VAL A 482 N LEU A 446 SHEET 7 AA416 ALA A 421 THR A 429 -1 N PHE A 426 O MET A 483 SHEET 8 AA416 GLN A 408 SER A 416 -1 N TYR A 414 O ARG A 423 SHEET 9 AA416 GLN B 408 PHE B 415 -1 O GLN B 411 N ILE A 409 SHEET 10 AA416 TRP B 422 THR B 429 -1 O ARG B 423 N TYR B 414 SHEET 11 AA416 ILE B 480 MET B 483 -1 O MET B 483 N PHE B 426 SHEET 12 AA416 VAL B 443 GLN B 447 1 N LEU B 446 O VAL B 482 SHEET 13 AA416 ARG B 536 LEU B 541 1 O ALA B 539 N TYR B 445 SHEET 14 AA416 TYR B 561 PHE B 565 1 O PHE B 565 N GLY B 540 SHEET 15 AA416 LEU B 597 GLY B 603 1 O TYR B 599 N GLY B 564 SHEET 16 AA416 VAL B 629 SER B 633 1 O SER B 633 N ILE B 602 SHEET 1 AA5 5 ILE B 298 SER B 299 0 SHEET 2 AA5 5 GLN B 311 ILE B 312 -1 O ILE B 312 N ILE B 298 SHEET 3 AA5 5 ARG B 317 LYS B 323 -1 O LEU B 319 N GLN B 311 SHEET 4 AA5 5 SER B 347 PRO B 354 -1 O TRP B 348 N ILE B 322 SHEET 5 AA5 5 VAL B 341 ARG B 342 -1 N VAL B 341 O ALA B 349 SHEET 1 AA6 4 LYS B 337 ASP B 339 0 SHEET 2 AA6 4 VAL B 330 ASP B 333 -1 N VAL B 332 O TYR B 338 SHEET 3 AA6 4 GLY B 358 ILE B 366 -1 O LEU B 365 N GLN B 331 SHEET 4 AA6 4 VAL B 369 VAL B 371 -1 O VAL B 371 N ILE B 364 SHEET 1 AA7 5 LYS B 337 ASP B 339 0 SHEET 2 AA7 5 VAL B 330 ASP B 333 -1 N VAL B 332 O TYR B 338 SHEET 3 AA7 5 GLY B 358 ILE B 366 -1 O LEU B 365 N GLN B 331 SHEET 4 AA7 5 ARG B 384 ILE B 391 -1 O ILE B 391 N GLY B 358 SHEET 5 AA7 5 THR B 378 GLY B 381 -1 N PHE B 379 O ALA B 386 CISPEP 1 TYR A 309 PRO A 310 0 4.36 CISPEP 2 TYR B 309 PRO B 310 0 5.33 SITE 1 AC1 4 GLY A 450 SER A 542 MET A 543 HOH A 997 SITE 1 AC2 7 GLY A 306 ALA A 307 GLN A 308 TYR A 309 SITE 2 AC2 7 ALA A 375 HOH A 811 HOH A 913 SITE 1 AC3 4 ASP A 326 ARG B 329 ASP B 367 GLY B 368 CRYST1 103.962 80.966 107.350 90.00 105.67 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009619 0.000000 0.002698 0.00000 SCALE2 0.000000 0.012351 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009675 0.00000