HEADER TRANSFERASE 22-DEC-20 7BE6 TITLE STRUCTURE OF DDR1 RECEPTOR TYROSINE KINASE IN COMPLEX WITH INHIBITOR TITLE 2 SR159 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPITHELIAL DISCOIDIN DOMAIN-CONTAINING RECEPTOR 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EPITHELIAL DISCOIDIN DOMAIN RECEPTOR 1,CD167 ANTIGEN-LIKE COMPND 5 FAMILY MEMBER A,CELL ADHESION KINASE,DISCOIDIN RECEPTOR TYROSINE COMPND 6 KINASE,HGK2,MAMMARY CARCINOMA KINASE 10,MCK-10,PROTEIN-TYROSINE COMPND 7 KINASE 3A,PROTEIN-TYROSINE KINASE RTK-6,TRK E,TYROSINE KINASE DDR, COMPND 8 TYROSINE-PROTEIN KINASE CAK; COMPND 9 EC: 2.7.10.1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DDR1, CAK, EDDR1, NEP, NTRK4, PTK3A, RTK6, TRKE; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS DDR1 RECEPTOR TYROSINE KINASE, KINASE INHIBITOR, STRUCTURE-BASED KEYWDS 2 DESIGN, STRUCTURAL GENOMICS CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.M.PINKAS,J.C.BUFTON,S.ROEHM,A.C.JOERGER,S.KNAPP,A.N.BULLOCK, AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 31-JAN-24 7BE6 1 REMARK REVDAT 2 14-SEP-22 7BE6 1 JRNL REVDAT 1 03-MAR-21 7BE6 0 JRNL AUTH S.ROHM,B.T.BERGER,M.SCHRODER,D.CHATTERJEE,S.MATHEA, JRNL AUTH 2 A.C.JOERGER,D.M.PINKAS,J.C.BUFTON,A.TJADEN,L.KOVOORU, JRNL AUTH 3 M.KUDOLO,C.POHL,A.N.BULLOCK,S.MULLER,S.LAUFER,S.KNAPP JRNL TITL DEVELOPMENT OF A SELECTIVE DUAL DISCOIDIN DOMAIN RECEPTOR JRNL TITL 2 (DDR)/P38 KINASE CHEMICAL PROBE. JRNL REF J.MED.CHEM. V. 64 13451 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34506142 JRNL DOI 10.1021/ACS.JMEDCHEM.1C00868 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.353 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.974 REMARK 3 FREE R VALUE TEST SET COUNT : 1542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.9835 - 4.1603 1.00 2857 162 0.1833 0.2286 REMARK 3 2 4.1603 - 3.3022 1.00 2728 140 0.1704 0.2003 REMARK 3 3 3.3022 - 2.8848 1.00 2687 148 0.1914 0.2199 REMARK 3 4 2.8848 - 2.6210 1.00 2677 137 0.1871 0.2548 REMARK 3 5 2.6210 - 2.4331 1.00 2654 129 0.1874 0.2432 REMARK 3 6 2.4331 - 2.2897 1.00 2690 124 0.1861 0.2295 REMARK 3 7 2.2897 - 2.1750 1.00 2648 118 0.1868 0.2401 REMARK 3 8 2.1750 - 2.0803 1.00 2640 146 0.1867 0.2469 REMARK 3 9 2.0803 - 2.0002 1.00 2615 160 0.1986 0.2521 REMARK 3 10 2.0002 - 1.9312 1.00 2632 147 0.2148 0.2702 REMARK 3 11 1.9312 - 1.8708 1.00 2633 131 0.2684 0.3070 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.263 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2547 REMARK 3 ANGLE : 0.882 3441 REMARK 3 CHIRALITY : 0.054 368 REMARK 3 PLANARITY : 0.006 444 REMARK 3 DIHEDRAL : 21.659 1521 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 600 THROUGH 650 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7009 1.8625 -17.9308 REMARK 3 T TENSOR REMARK 3 T11: 0.3207 T22: 0.2789 REMARK 3 T33: 0.5039 T12: 0.0129 REMARK 3 T13: 0.0105 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 0.3349 L22: 0.3561 REMARK 3 L33: 0.1068 L12: -0.3216 REMARK 3 L13: -0.1119 L23: 0.1689 REMARK 3 S TENSOR REMARK 3 S11: -0.2605 S12: -0.1032 S13: -0.0232 REMARK 3 S21: 0.1099 S22: 0.1376 S23: 0.3692 REMARK 3 S31: 0.2302 S32: -0.1060 S33: -0.0296 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 651 THROUGH 739 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6036 14.1070 -18.6641 REMARK 3 T TENSOR REMARK 3 T11: 0.2242 T22: 0.1957 REMARK 3 T33: 0.2738 T12: -0.0156 REMARK 3 T13: 0.0070 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 0.3365 L22: 0.1953 REMARK 3 L33: 0.3156 L12: 0.0041 REMARK 3 L13: 0.3007 L23: 0.0851 REMARK 3 S TENSOR REMARK 3 S11: -0.0620 S12: -0.0342 S13: -0.2700 REMARK 3 S21: 0.0159 S22: 0.0435 S23: -0.0035 REMARK 3 S31: 0.1188 S32: -0.0381 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 740 THROUGH 877 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2009 32.5654 -16.7118 REMARK 3 T TENSOR REMARK 3 T11: 0.1883 T22: 0.2033 REMARK 3 T33: 0.1601 T12: 0.0048 REMARK 3 T13: -0.0031 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 0.8746 L22: 0.5136 REMARK 3 L33: 0.5527 L12: -0.3988 REMARK 3 L13: 0.0800 L23: 0.0358 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: 0.0334 S13: 0.0869 REMARK 3 S21: 0.0276 S22: 0.0148 S23: -0.0612 REMARK 3 S31: -0.0107 S32: -0.0357 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 878 THROUGH 912 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6977 35.7863 -2.7926 REMARK 3 T TENSOR REMARK 3 T11: 0.3045 T22: 0.2650 REMARK 3 T33: 0.1653 T12: 0.0274 REMARK 3 T13: -0.0104 T23: -0.0537 REMARK 3 L TENSOR REMARK 3 L11: 0.8155 L22: 0.2147 REMARK 3 L33: 0.2510 L12: 0.0767 REMARK 3 L13: -0.0406 L23: -0.2093 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: -0.2807 S13: 0.2382 REMARK 3 S21: 0.3378 S22: 0.0872 S23: 0.0871 REMARK 3 S31: -0.0499 S32: -0.1235 S33: 0.0374 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7BE6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1292113145. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31065 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 65.984 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 10.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5FDX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 10% ETHYLENE GLYCOL, 0.1 REMARK 280 M BISTRISPROPANE PH 6.5, 0.2 M SODIUM SULFATE (50 NL PROTEIN AND REMARK 280 100 NL RESERVOIR), VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 31.51150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.98350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.51150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.98350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 599 REMARK 465 GLU A 724 REMARK 465 GLY A 725 REMARK 465 ALA A 726 REMARK 465 PRO A 727 REMARK 465 GLY A 728 REMARK 465 ASP A 729 REMARK 465 GLY A 730 REMARK 465 GLN A 731 REMARK 465 ALA A 732 REMARK 465 ALA A 733 REMARK 465 GLN A 734 REMARK 465 VAL A 913 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 615 CE NZ REMARK 470 ASP A 639 CG OD1 OD2 REMARK 470 ARG A 645 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 646 CG CD CE NZ REMARK 470 LYS A 663 CG CD CE NZ REMARK 470 ASP A 694 CG OD1 OD2 REMARK 470 ASN A 790 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 645 -123.50 -105.63 REMARK 500 LYS A 646 -61.96 -136.85 REMARK 500 ARG A 765 -10.80 79.48 REMARK 500 ASP A 766 49.69 -141.85 REMARK 500 MET A 787 59.92 -105.66 REMARK 500 ASN A 790 -12.33 72.39 REMARK 500 VAL A 799 -116.27 -112.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TJW A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1010 DBREF 7BE6 A 601 913 UNP Q08345 DDR1_HUMAN 601 913 SEQADV 7BE6 SER A 599 UNP Q08345 EXPRESSION TAG SEQADV 7BE6 MET A 600 UNP Q08345 EXPRESSION TAG SEQRES 1 A 315 SER MET PRO ARG VAL ASP PHE PRO ARG SER ARG LEU ARG SEQRES 2 A 315 PHE LYS GLU LYS LEU GLY GLU GLY GLN PHE GLY GLU VAL SEQRES 3 A 315 HIS LEU CYS GLU VAL ASP SER PRO GLN ASP LEU VAL SER SEQRES 4 A 315 LEU ASP PHE PRO LEU ASN VAL ARG LYS GLY HIS PRO LEU SEQRES 5 A 315 LEU VAL ALA VAL LYS ILE LEU ARG PRO ASP ALA THR LYS SEQRES 6 A 315 ASN ALA ARG ASN ASP PHE LEU LYS GLU VAL LYS ILE MET SEQRES 7 A 315 SER ARG LEU LYS ASP PRO ASN ILE ILE ARG LEU LEU GLY SEQRES 8 A 315 VAL CYS VAL GLN ASP ASP PRO LEU CYS MET ILE THR ASP SEQRES 9 A 315 TYR MET GLU ASN GLY ASP LEU ASN GLN PHE LEU SER ALA SEQRES 10 A 315 HIS GLN LEU GLU ASP LYS ALA ALA GLU GLY ALA PRO GLY SEQRES 11 A 315 ASP GLY GLN ALA ALA GLN GLY PRO THR ILE SER TYR PRO SEQRES 12 A 315 MET LEU LEU HIS VAL ALA ALA GLN ILE ALA SER GLY MET SEQRES 13 A 315 ARG TYR LEU ALA THR LEU ASN PHE VAL HIS ARG ASP LEU SEQRES 14 A 315 ALA THR ARG ASN CYS LEU VAL GLY GLU ASN PHE THR ILE SEQRES 15 A 315 LYS ILE ALA ASP PHE GLY MET SER ARG ASN LEU TYR ALA SEQRES 16 A 315 GLY ASP TYR TYR ARG VAL GLN GLY ARG ALA VAL LEU PRO SEQRES 17 A 315 ILE ARG TRP MET ALA TRP GLU CYS ILE LEU MET GLY LYS SEQRES 18 A 315 PHE THR THR ALA SER ASP VAL TRP ALA PHE GLY VAL THR SEQRES 19 A 315 LEU TRP GLU VAL LEU MET LEU CYS ARG ALA GLN PRO PHE SEQRES 20 A 315 GLY GLN LEU THR ASP GLU GLN VAL ILE GLU ASN ALA GLY SEQRES 21 A 315 GLU PHE PHE ARG ASP GLN GLY ARG GLN VAL TYR LEU SER SEQRES 22 A 315 ARG PRO PRO ALA CYS PRO GLN GLY LEU TYR GLU LEU MET SEQRES 23 A 315 LEU ARG CYS TRP SER ARG GLU SER GLU GLN ARG PRO PRO SEQRES 24 A 315 PHE SER GLN LEU HIS ARG PHE LEU ALA GLU ASP ALA LEU SEQRES 25 A 315 ASN THR VAL HET EDO A1001 4 HET EDO A1002 4 HET EDO A1003 4 HET EDO A1004 4 HET EDO A1005 4 HET PO4 A1006 5 HET SO4 A1007 5 HET EDO A1008 4 HET TJW A1009 47 HET EDO A1010 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM PO4 PHOSPHATE ION HETNAM SO4 SULFATE ION HETNAM TJW 5-AMINO-N-(4-(((2S)-4-CYCLOHEXYL-1-((1- HETNAM 2 TJW (METHYLSULFONYL)PIPERIDIN-3-YL)AMINO)-1-OXOBUTAN-2- HETNAM 3 TJW YL)CARBAMOYL)BENZYL)-1-PHENYL-1H-PYRAZOLE-4- HETNAM 4 TJW CARBOXAMIDE HETSYN EDO ETHYLENE GLYCOL HETSYN TJW 5-AZANYL-~{N}-[[4-[[(2~{S})-4-CYCLOHEXYL-1-[[(3~{S})-1- HETSYN 2 TJW METHYLSULFONYLPIPERIDIN-3-YL]AMINO]-1-OXIDANYLIDENE- HETSYN 3 TJW BUTAN-2-YL]CARBAMOYL]PHENYL]METHYL]-1-PHENYL-PYRAZOLE- HETSYN 4 TJW 4-CARBOXAMIDE; INHIBITOR SR159 FORMUL 2 EDO 7(C2 H6 O2) FORMUL 7 PO4 O4 P 3- FORMUL 8 SO4 O4 S 2- FORMUL 10 TJW C34 H45 N7 O5 S FORMUL 12 HOH *158(H2 O) HELIX 1 AA1 PRO A 606 SER A 608 5 3 HELIX 2 AA2 PRO A 632 SER A 637 1 6 HELIX 3 AA3 THR A 662 ARG A 678 1 17 HELIX 4 AA4 ASP A 708 ALA A 715 1 8 HELIX 5 AA5 SER A 739 LEU A 760 1 22 HELIX 6 AA6 ALA A 768 ARG A 770 5 3 HELIX 7 AA7 GLU A 776 PHE A 778 5 3 HELIX 8 AA8 TYR A 792 TYR A 796 5 5 HELIX 9 AA9 PRO A 806 MET A 810 5 5 HELIX 10 AB1 ALA A 811 GLY A 818 1 8 HELIX 11 AB2 THR A 821 MET A 838 1 18 HELIX 12 AB3 THR A 849 ASP A 863 1 15 HELIX 13 AB4 PRO A 877 TRP A 888 1 12 HELIX 14 AB5 GLU A 891 ARG A 895 5 5 HELIX 15 AB6 PRO A 897 THR A 912 1 16 SHEET 1 AA1 5 LEU A 610 GLU A 618 0 SHEET 2 AA1 5 GLY A 622 VAL A 629 -1 O VAL A 624 N LEU A 616 SHEET 3 AA1 5 LEU A 651 LEU A 657 -1 O ILE A 656 N GLU A 623 SHEET 4 AA1 5 CYS A 698 ASP A 702 -1 O THR A 701 N ALA A 653 SHEET 5 AA1 5 LEU A 687 CYS A 691 -1 N GLY A 689 O ILE A 700 SHEET 1 AA2 2 GLN A 717 LEU A 718 0 SHEET 2 AA2 2 THR A 737 ILE A 738 1 O ILE A 738 N GLN A 717 SHEET 1 AA3 2 CYS A 772 VAL A 774 0 SHEET 2 AA3 2 ILE A 780 ILE A 782 -1 O LYS A 781 N LEU A 773 SHEET 1 AA4 2 TYR A 797 ARG A 798 0 SHEET 2 AA4 2 VAL A 804 LEU A 805 -1 O LEU A 805 N TYR A 797 CISPEP 1 ASP A 695 PRO A 696 0 -6.17 SITE 1 AC1 9 MET A 810 ALA A 811 TRP A 812 ILE A 815 SITE 2 AC1 9 PHE A 845 VAL A 853 ASN A 856 ALA A 857 SITE 3 AC1 9 EDO A1002 SITE 1 AC2 7 TRP A 827 PHE A 845 TYR A 869 LEU A 870 SITE 2 AC2 7 TRP A 888 EDO A1001 HOH A1111 SITE 1 AC3 4 SER A 892 ARG A 895 PRO A 897 HOH A1138 SITE 1 AC4 4 GLY A 786 VAL A 804 HOH A1122 HOH A1129 SITE 1 AC5 2 ASP A 668 HOH A1137 SITE 1 AC6 6 GLY A 801 ARG A 802 ARG A 872 PRO A 874 SITE 2 AC6 6 ALA A 875 ARG A 903 SITE 1 AC7 8 LYS A 671 TRP A 834 PHE A 845 LEU A 870 SITE 2 AC7 8 SER A 871 HOH A1130 HOH A1171 HOH A1201 SITE 1 AC8 5 TRP A 812 GLU A 813 ARG A 890 GLU A 891 SITE 2 AC8 5 SER A 892 SITE 1 AC9 17 ALA A 653 GLU A 672 MET A 676 ILE A 685 SITE 2 AC9 17 THR A 701 ASP A 702 TYR A 703 MET A 704 SITE 3 AC9 17 GLY A 707 PHE A 762 HIS A 764 ILE A 782 SITE 4 AC9 17 ALA A 783 ASP A 784 GLN A 847 HOH A1139 SITE 5 AC9 17 HOH A1220 SITE 1 AD1 3 LYS A 655 GLU A 672 HOH A1139 CRYST1 63.023 131.967 43.803 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015867 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007578 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022829 0.00000