HEADER HYDROLASE 14-APR-20 7BWB TITLE BOMBYX MORI GH32 BETA-FRUCTOFURANOSIDASE BMSUC1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-FRUCTOFURANOSIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.26; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE SEQUENCE IS REGISTERED GENBANK WITH AN ACCESSION COMPND 7 CODE OF BCD5765 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: SILK MOTH; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 GENE: BMSUC1, SUC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS GLYCOSIDE HYDROLASE, SUCROSE, BETA-PROPELLER, HORIZONTAL GENE KEYWDS 2 TRANSFER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.MIYAZAKI,N.OBA REVDAT 3 29-NOV-23 7BWB 1 REMARK REVDAT 2 18-NOV-20 7BWB 1 JRNL REVDAT 1 04-NOV-20 7BWB 0 JRNL AUTH T.MIYAZAKI,N.OBA,E.Y.PARK JRNL TITL STRUCTURAL INSIGHT INTO THE SUBSTRATE SPECIFICITY OF BOMBYX JRNL TITL 2 MORI BETA-FRUCTOFURANOSIDASE BELONGING TO THE GLYCOSIDE JRNL TITL 3 HYDROLASE FAMILY 32. JRNL REF INSECT BIOCHEM.MOL.BIOL. V. 127 03494 2020 JRNL REFN ISSN 0965-1748 JRNL PMID 33132139 JRNL DOI 10.1016/J.IBMB.2020.103494 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 52623 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.863 REMARK 3 FREE R VALUE TEST SET COUNT : 2559 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3672 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2760 REMARK 3 BIN FREE R VALUE SET COUNT : 187 REMARK 3 BIN FREE R VALUE : 0.3300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3777 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 188 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.91000 REMARK 3 B22 (A**2) : -1.01200 REMARK 3 B33 (A**2) : -3.89900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.162 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.311 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3902 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3401 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5314 ; 1.523 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7914 ; 1.292 ; 1.573 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 467 ; 8.546 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 220 ;36.940 ;23.045 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 617 ;13.227 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;12.985 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 474 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4423 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 878 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 623 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 21 ; 0.227 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1802 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 183 ; 0.119 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1859 ; 1.710 ; 1.864 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1858 ; 1.710 ; 1.863 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2323 ; 2.192 ; 2.796 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2324 ; 2.192 ; 2.797 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2043 ; 1.922 ; 2.089 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2043 ; 1.922 ; 2.090 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2989 ; 2.411 ; 3.054 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2989 ; 2.411 ; 3.054 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7303 ; 2.096 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 32 REMARK 3 ORIGIN FOR THE GROUP (A): 30.6360 47.1310 17.0900 REMARK 3 T TENSOR REMARK 3 T11: 0.3802 T22: 0.2672 REMARK 3 T33: 0.3323 T12: -0.1391 REMARK 3 T13: 0.0213 T23: -0.0947 REMARK 3 L TENSOR REMARK 3 L11: 21.7051 L22: 16.3340 REMARK 3 L33: 24.9149 L12: 5.3687 REMARK 3 L13: -12.3447 L23: -9.8087 REMARK 3 S TENSOR REMARK 3 S11: -0.1924 S12: 1.3744 S13: 0.0993 REMARK 3 S21: 0.6982 S22: -0.2791 S23: -0.3656 REMARK 3 S31: 0.6502 S32: 0.2397 S33: 0.4715 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 143 REMARK 3 ORIGIN FOR THE GROUP (A): 26.5190 31.3690 15.1610 REMARK 3 T TENSOR REMARK 3 T11: 0.4174 T22: 0.1943 REMARK 3 T33: 0.4547 T12: -0.2507 REMARK 3 T13: 0.2274 T23: -0.2021 REMARK 3 L TENSOR REMARK 3 L11: 2.1798 L22: 1.8663 REMARK 3 L33: 3.3120 L12: -0.8887 REMARK 3 L13: -1.6260 L23: 0.6191 REMARK 3 S TENSOR REMARK 3 S11: 0.4733 S12: -0.3865 S13: 0.6734 REMARK 3 S21: -0.0532 S22: 0.2042 S23: -0.4173 REMARK 3 S31: -1.1010 S32: 0.6248 S33: -0.6775 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 144 A 488 REMARK 3 ORIGIN FOR THE GROUP (A): 21.8250 14.4420 11.2120 REMARK 3 T TENSOR REMARK 3 T11: 0.0254 T22: 0.1115 REMARK 3 T33: 0.2100 T12: -0.0498 REMARK 3 T13: 0.0164 T23: -0.0418 REMARK 3 L TENSOR REMARK 3 L11: 1.1213 L22: 0.8492 REMARK 3 L33: 1.9449 L12: -0.3227 REMARK 3 L13: -0.9858 L23: 0.3258 REMARK 3 S TENSOR REMARK 3 S11: 0.0543 S12: -0.1228 S13: 0.1784 REMARK 3 S21: -0.0784 S22: 0.1268 S23: -0.1199 REMARK 3 S31: -0.1689 S32: 0.2988 S33: -0.1810 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 7BWB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-APR-20. REMARK 100 THE DEPOSITION ID IS D_1300016605. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52834 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.60700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MRBUMP REMARK 200 STARTING MODEL: 1UYP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 3350, 40 MM CITRIC ACID, 60 MM REMARK 280 BIS-TRIS PROPANE, PH 6.4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.13750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.13750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 47.37600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.65400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 47.37600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.65400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.13750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 47.37600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.65400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.13750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 47.37600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 59.65400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 669 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 465 MET A 21 REMARK 465 LEU A 22 REMARK 465 ARG A 23 REMARK 465 GLN A 24 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU A 129 C LEU A 129 O 0.118 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 52 19.89 -145.43 REMARK 500 ASN A 62 -136.86 -131.57 REMARK 500 PRO A 89 122.54 -34.70 REMARK 500 ILE A 101 -54.25 -121.03 REMARK 500 GLU A 113 -119.43 -132.49 REMARK 500 HIS A 125 -64.34 -96.66 REMARK 500 VAL A 158 -52.38 -128.28 REMARK 500 ASP A 174 18.09 58.20 REMARK 500 PHE A 179 79.81 -163.76 REMARK 500 ASP A 181 54.60 75.54 REMARK 500 LYS A 188 -121.17 56.60 REMARK 500 ASP A 212 4.03 -156.12 REMARK 500 LEU A 213 -19.23 76.71 REMARK 500 ALA A 298 97.33 65.11 REMARK 500 THR A 358 -99.22 -104.32 REMARK 500 GLN A 369 -0.05 78.37 REMARK 500 REMARK 500 REMARK: NULL DBREF 7BWB A 1 488 PDB 7BWB 7BWB 1 488 SEQRES 1 A 488 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 488 LEU VAL PRO ARG GLY SER HIS MET LEU ARG GLN GLN ASN SEQRES 3 A 488 GLU THR ALA LYS ARG GLU LEU GLU GLU TYR ILE ALA ASP SEQRES 4 A 488 LYS LYS ALA GLU ILE ASN PRO ARG TYR ARG PRO HIS TYR SEQRES 5 A 488 HIS ILE SER PRO PRO VAL GLY TRP MET ASN ASP PRO ASN SEQRES 6 A 488 GLY PHE SER TYR TYR LYS GLY LYS PHE HIS LEU PHE TYR SEQRES 7 A 488 GLN PHE TYR PRO TYR ASP SER VAL TRP GLY PRO MET HIS SEQRES 8 A 488 TRP GLY HIS VAL SER SER SER ASN LEU ILE ASP TRP GLU SEQRES 9 A 488 HIS LEU PRO THR ALA LEU ILE PRO GLU THR GLU MET CYS SEQRES 10 A 488 PHE SER GLY GLY ALA VAL VAL HIS GLY ASP ASP LEU VAL SEQRES 11 A 488 LEU LEU TYR THR GLY ARG VAL THR THR ASP THR ASP PRO SEQRES 12 A 488 PHE TYR ASN GLU THR GLN TYR LEU ALA PHE SER ASN ASP SEQRES 13 A 488 GLY VAL ASN PHE ARG LYS TYR GLU GLY ASN PRO VAL LEU SEQRES 14 A 488 SER TYR VAL PRO ASP ASN SER ALA ASP PHE ARG ASP PRO SEQRES 15 A 488 LYS ILE TRP LYS PHE LYS ASP HIS TRP TYR VAL VAL ILE SEQRES 16 A 488 GLY SER SER SER ASN LYS GLN GLY ARG VAL LEU LEU TYR SEQRES 17 A 488 ARG SER GLY ASP LEU PHE ASN TRP GLU PHE LEU SER VAL SEQRES 18 A 488 LEU GLY GLU SER ASP GLY ASP MET GLY TYR MET TRP GLU SEQRES 19 A 488 CYS PRO ASP LEU PHE GLU LEU GLY GLY LYS THR ILE PHE SEQRES 20 A 488 LEU TRP SER PRO GLN GLY LEU GLU PRO LYS GLY ASP ARG SEQRES 21 A 488 TYR LYS ASN THR TYR GLN THR GLY TYR TYR ILE GLY GLU SEQRES 22 A 488 LEU ASP TYR GLU THR PHE GLU PHE LYS THR ASP LYS TYR SEQRES 23 A 488 PHE GLN GLU LEU ASP TYR GLY HIS ASP PHE TYR ALA THR SEQRES 24 A 488 GLN THR ILE GLN GLY ASP GLY LYS THR TYR LEU ILE GLY SEQRES 25 A 488 TRP PHE ASN MET TRP GLU VAL PRO HIS LEU GLU GLU GLU SEQRES 26 A 488 ASP GLY TRP ALA GLY THR THR THR LEU VAL ARG GLU LEU SEQRES 27 A 488 GLN LEU ILE GLY THR ARG ILE THR MET ASN PRO LEU GLU SEQRES 28 A 488 GLY ILE GLN ASP LEU ARG THR ASP SER VAL HIS ASN GLY SEQRES 29 A 488 ASP LEU GLU PRO GLN GLN ALA ILE GLU PHE GLY PRO THR SEQRES 30 A 488 ALA GLU ILE ILE LEU GLN GLY CYS LEU ASP GLN LYS ILE SEQRES 31 A 488 GLU LEU LEU ILE GLN GLY LYS GLU GLY GLY LEU VAL THR SEQRES 32 A 488 THR VAL THR TRP ASP PRO GLU VAL GLY LYS VAL ILE VAL SEQRES 33 A 488 ASN ARG SER GLY GLU VAL ARG GLN VAL GLU TRP VAL PRO SEQRES 34 A 488 ILE GLY LYS THR SER TRP ARG LEU PHE LEU ASP ALA SER SEQRES 35 A 488 SER LEU GLU LEU PHE CYS GLY GLU GLY GLU VAL VAL PHE SEQRES 36 A 488 SER SER ARG ILE PHE SER ASP GLY ASP TRP VAL VAL LYS SEQRES 37 A 488 ASN SER SER PRO GLN THR LEU SER VAL GLU ALA TYR ARG SEQRES 38 A 488 LEU ARG ARG SER VAL PRO ALA FORMUL 2 HOH *188(H2 O) HELIX 1 AA1 ASN A 26 LYS A 41 1 16 HELIX 2 AA2 ALA A 42 ILE A 44 5 3 HELIX 3 AA3 VAL A 172 SER A 176 5 5 HELIX 4 AA4 GLU A 323 ASP A 326 5 4 HELIX 5 AA5 GLY A 352 ASP A 355 5 4 SHEET 1 AA1 5 GLU A 104 HIS A 105 0 SHEET 2 AA1 5 HIS A 91 SER A 97 -1 N SER A 96 O GLU A 104 SHEET 3 AA1 5 LYS A 73 TYR A 81 -1 N TYR A 78 O GLY A 93 SHEET 4 AA1 5 GLY A 59 TYR A 70 -1 N SER A 68 O HIS A 75 SHEET 5 AA1 5 TRP A 328 ALA A 329 1 O ALA A 329 N GLY A 59 SHEET 1 AA2 4 MET A 116 VAL A 124 0 SHEET 2 AA2 4 LEU A 129 THR A 138 -1 O VAL A 130 N VAL A 123 SHEET 3 AA2 4 TYR A 145 SER A 154 -1 O TYR A 150 N TYR A 133 SHEET 4 AA2 4 ARG A 161 LYS A 162 -1 O ARG A 161 N PHE A 153 SHEET 1 AA3 4 PHE A 179 PHE A 187 0 SHEET 2 AA3 4 HIS A 190 SER A 199 -1 O TYR A 192 N TRP A 185 SHEET 3 AA3 4 GLN A 202 SER A 210 -1 O LEU A 206 N ILE A 195 SHEET 4 AA3 4 GLU A 217 GLU A 224 -1 O SER A 220 N LEU A 207 SHEET 1 AA4 4 MET A 232 LEU A 241 0 SHEET 2 AA4 4 LYS A 244 GLN A 252 -1 O ILE A 246 N PHE A 239 SHEET 3 AA4 4 GLY A 268 LEU A 274 -1 O GLY A 268 N TRP A 249 SHEET 4 AA4 4 PHE A 281 THR A 283 -1 O LYS A 282 N GLU A 273 SHEET 1 AA5 4 MET A 232 LEU A 241 0 SHEET 2 AA5 4 LYS A 244 GLN A 252 -1 O ILE A 246 N PHE A 239 SHEET 3 AA5 4 GLY A 268 LEU A 274 -1 O GLY A 268 N TRP A 249 SHEET 4 AA5 4 GLN A 288 GLU A 289 -1 O GLN A 288 N TYR A 269 SHEET 1 AA6 4 TYR A 297 GLY A 304 0 SHEET 2 AA6 4 LYS A 307 TRP A 313 -1 O TYR A 309 N ILE A 302 SHEET 3 AA6 4 ARG A 336 ILE A 341 -1 O LEU A 338 N THR A 308 SHEET 4 AA6 4 ARG A 344 PRO A 349 -1 O ARG A 344 N ILE A 341 SHEET 1 AA7 3 ARG A 357 HIS A 362 0 SHEET 2 AA7 3 LEU A 475 LEU A 482 -1 O ARG A 481 N THR A 358 SHEET 3 AA7 3 ASP A 365 LEU A 366 -1 N LEU A 366 O LEU A 475 SHEET 1 AA8 6 ARG A 357 HIS A 362 0 SHEET 2 AA8 6 LEU A 475 LEU A 482 -1 O ARG A 481 N THR A 358 SHEET 3 AA8 6 ALA A 378 GLN A 383 -1 N ILE A 381 O GLU A 478 SHEET 4 AA8 6 TRP A 435 ASP A 440 -1 O LEU A 437 N ILE A 380 SHEET 5 AA8 6 SER A 443 CYS A 448 -1 O PHE A 447 N ARG A 436 SHEET 6 AA8 6 VAL A 453 ARG A 458 -1 O VAL A 453 N CYS A 448 SHEET 1 AA9 6 ALA A 371 GLU A 373 0 SHEET 2 AA9 6 TRP A 465 ASN A 469 -1 O VAL A 467 N ILE A 372 SHEET 3 AA9 6 ILE A 390 GLY A 396 -1 N GLN A 395 O VAL A 466 SHEET 4 AA9 6 GLY A 399 ASP A 408 -1 O THR A 403 N ILE A 394 SHEET 5 AA9 6 LYS A 413 ARG A 418 -1 O ILE A 415 N THR A 406 SHEET 6 AA9 6 GLU A 421 GLU A 426 -1 O ARG A 423 N VAL A 416 CISPEP 1 ASN A 166 PRO A 167 0 1.12 CRYST1 94.752 119.308 100.275 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010554 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008382 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009973 0.00000