HEADER HYDROLASE 05-MAY-20 7C1O TITLE CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS ERA Y63A BOUND TO GDP.ALF4- COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE ERA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GTP BINDING DOMAIN; COMPND 5 SYNONYM: GTP-BINDING PROTEIN ERA; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS (STRAIN VF5); SOURCE 3 ORGANISM_TAXID: 224324; SOURCE 4 STRAIN: VF5; SOURCE 5 GENE: ERA, ERA1, AQ_1994; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PBA1971 KEYWDS HAS-GTPASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.BATRA,B.PRAKASH REVDAT 2 29-NOV-23 7C1O 1 REMARK REVDAT 1 12-MAY-21 7C1O 0 JRNL AUTH S.BATRA,B.PRAKASH JRNL TITL CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS ERA Y63A BOUND TO JRNL TITL 2 GDP.ALF4- JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5200 - 4.9900 1.00 1434 159 0.1830 0.1809 REMARK 3 2 4.9900 - 3.9600 1.00 1338 149 0.1575 0.1742 REMARK 3 3 3.9600 - 3.4600 1.00 1328 147 0.1898 0.2417 REMARK 3 4 3.4600 - 3.1400 1.00 1313 146 0.2144 0.2810 REMARK 3 5 3.1400 - 2.9200 1.00 1299 145 0.2294 0.2732 REMARK 3 6 2.9200 - 2.7500 1.00 1302 144 0.2400 0.3019 REMARK 3 7 2.7500 - 2.6100 1.00 1286 143 0.2466 0.3098 REMARK 3 8 2.6100 - 2.4900 1.00 1315 145 0.2740 0.3207 REMARK 3 9 2.4900 - 2.4000 1.00 1274 141 0.2402 0.2964 REMARK 3 10 2.4000 - 2.3200 1.00 1283 144 0.2470 0.2764 REMARK 3 11 2.3200 - 2.2400 1.00 1283 143 0.2659 0.2851 REMARK 3 12 2.2400 - 2.1800 0.99 1267 140 0.3048 0.3339 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3496 0.3857 -12.9985 REMARK 3 T TENSOR REMARK 3 T11: 0.2555 T22: 0.2656 REMARK 3 T33: 0.2136 T12: 0.0141 REMARK 3 T13: -0.0072 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 3.6812 L22: 4.0024 REMARK 3 L33: 0.6923 L12: -0.3792 REMARK 3 L13: 0.0410 L23: 0.0623 REMARK 3 S TENSOR REMARK 3 S11: -0.0341 S12: -0.1053 S13: 0.1146 REMARK 3 S21: 0.2007 S22: 0.0057 S23: -0.1308 REMARK 3 S31: -0.1942 S32: -0.0396 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2423 -13.3807 -16.9460 REMARK 3 T TENSOR REMARK 3 T11: 0.2695 T22: 0.2994 REMARK 3 T33: 0.3946 T12: 0.0206 REMARK 3 T13: 0.0119 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 3.0870 L22: 2.7657 REMARK 3 L33: 0.7510 L12: 0.9959 REMARK 3 L13: 0.1793 L23: -0.2479 REMARK 3 S TENSOR REMARK 3 S11: -0.0802 S12: 0.1841 S13: -0.5651 REMARK 3 S21: -0.1383 S22: 0.0756 S23: 0.1742 REMARK 3 S31: 0.1589 S32: -0.1466 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4389 12.6092 -10.8132 REMARK 3 T TENSOR REMARK 3 T11: 0.5070 T22: 0.3919 REMARK 3 T33: 0.3080 T12: 0.0828 REMARK 3 T13: 0.0294 T23: -0.0490 REMARK 3 L TENSOR REMARK 3 L11: 0.9419 L22: 3.0413 REMARK 3 L33: 1.7671 L12: 0.3907 REMARK 3 L13: -0.2059 L23: -0.3598 REMARK 3 S TENSOR REMARK 3 S11: -0.0826 S12: -0.1869 S13: 0.2034 REMARK 3 S21: 0.5724 S22: 0.1509 S23: -0.1179 REMARK 3 S31: -0.5858 S32: -0.1332 S33: 0.0124 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 251 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5033 19.5041 -15.7394 REMARK 3 T TENSOR REMARK 3 T11: 0.5554 T22: 0.3685 REMARK 3 T33: 0.3491 T12: 0.0717 REMARK 3 T13: 0.0207 T23: 0.0371 REMARK 3 L TENSOR REMARK 3 L11: 1.2634 L22: 2.3864 REMARK 3 L33: 1.7081 L12: -0.4346 REMARK 3 L13: 0.4790 L23: -0.3792 REMARK 3 S TENSOR REMARK 3 S11: -0.0068 S12: -0.1007 S13: 0.0455 REMARK 3 S21: 0.3739 S22: 0.0273 S23: 0.1473 REMARK 3 S31: -0.8060 S32: 0.0102 S33: 0.0045 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7C1O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1300016856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-X REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17524 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 46.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 1.05200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.1 REMARK 200 STARTING MODEL: 3IEV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MG/ML PROTEIN WITH EQUAL VOLUME OF REMARK 280 100 MM BIS-TRIS, 200 MM AMMONIUM ACETATE, 18 % PEG 10000, PH 7.6, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.18850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.45500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.43000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.45500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.18850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.43000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 50 CG OD1 ND2 REMARK 470 LYS A 66 CG CD CE NZ REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 LYS A 132 CG CD CE NZ REMARK 470 HIS A 142 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 ASP A 163 CG OD1 OD2 REMARK 470 GLU A 164 CG CD OE1 OE2 REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 GLU A 177 CG CD OE1 OE2 REMARK 470 LEU A 179 CG CD1 CD2 REMARK 470 GLU A 182 CG CD OE1 OE2 REMARK 470 ASP A 183 CG OD1 OD2 REMARK 470 MET A 204 CG SD CE REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 LYS A 222 CG CD CE NZ REMARK 470 ASP A 225 CG OD1 OD2 REMARK 470 ASN A 229 CG OD1 ND2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 GLU A 242 CG CD OE1 OE2 REMARK 470 LYS A 251 CG CD CE NZ REMARK 470 LYS A 252 CG CD CE NZ REMARK 470 GLN A 254 CG CD OE1 NE2 REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 GLU A 258 CG CD OE1 OE2 REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 ARG A 264 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 265 CG CD OE1 NE2 REMARK 470 GLU A 268 CG CD OE1 OE2 REMARK 470 GLU A 278 CG CD OE1 OE2 REMARK 470 TRP A 280 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 280 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 39 -74.65 -122.28 REMARK 500 GLU A 51 -50.06 -141.02 REMARK 500 ASP A 69 85.53 -67.96 REMARK 500 GLU A 208 -137.21 64.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 403 REMARK 610 TRS A 404 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 406 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 13 OD1 REMARK 620 2 SER A 32 O 82.9 REMARK 620 3 LYS A 34 O 82.6 86.6 REMARK 620 4 THR A 37 OG1 132.9 80.3 52.8 REMARK 620 5 GDP A 402 O1B 89.1 138.4 132.8 130.7 REMARK 620 6 GDP A 402 O1A 111.2 66.9 147.4 102.0 78.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 405 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 38 OG1 81.5 REMARK 620 3 GDP A 402 O3B 102.9 172.2 REMARK 620 4 HOH A 513 O 86.1 95.5 91.3 REMARK 620 5 HOH A 551 O 91.0 85.2 88.3 177.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ALF A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 406 DBREF 7C1O A 1 301 UNP O67800 ERA_AQUAE 1 301 SEQADV 7C1O GLY A -6 UNP O67800 EXPRESSION TAG SEQADV 7C1O HIS A -5 UNP O67800 EXPRESSION TAG SEQADV 7C1O HIS A -4 UNP O67800 EXPRESSION TAG SEQADV 7C1O HIS A -3 UNP O67800 EXPRESSION TAG SEQADV 7C1O HIS A -2 UNP O67800 EXPRESSION TAG SEQADV 7C1O HIS A -1 UNP O67800 EXPRESSION TAG SEQADV 7C1O HIS A 0 UNP O67800 EXPRESSION TAG SEQADV 7C1O ALA A 63 UNP O67800 TYR 63 ENGINEERED MUTATION SEQRES 1 A 308 GLY HIS HIS HIS HIS HIS HIS MET LYS VAL GLY TYR VAL SEQRES 2 A 308 ALA ILE VAL GLY LYS PRO ASN VAL GLY LYS SER THR LEU SEQRES 3 A 308 LEU ASN ASN LEU LEU GLY THR LYS VAL SER ILE ILE SER SEQRES 4 A 308 PRO LYS ALA GLY THR THR ARG MET ARG VAL LEU GLY VAL SEQRES 5 A 308 LYS ASN ILE PRO ASN GLU ALA GLN ILE ILE PHE LEU ASP SEQRES 6 A 308 THR PRO GLY ILE ALA GLU PRO LYS LYS SER ASP VAL LEU SEQRES 7 A 308 GLY HIS SER MET VAL GLU ILE ALA LYS GLN SER LEU GLU SEQRES 8 A 308 GLU ALA ASP VAL ILE LEU PHE MET ILE ASP ALA THR GLU SEQRES 9 A 308 GLY TRP ARG PRO ARG ASP GLU GLU ILE TYR GLN ASN PHE SEQRES 10 A 308 ILE LYS PRO LEU ASN LYS PRO VAL ILE VAL VAL ILE ASN SEQRES 11 A 308 LYS ILE ASP LYS ILE GLY PRO ALA LYS ASN VAL LEU PRO SEQRES 12 A 308 LEU ILE ASP GLU ILE HIS LYS LYS HIS PRO GLU LEU THR SEQRES 13 A 308 GLU ILE VAL PRO ILE SER ALA LEU LYS GLY ALA ASN LEU SEQRES 14 A 308 ASP GLU LEU VAL LYS THR ILE LEU LYS TYR LEU PRO GLU SEQRES 15 A 308 GLY GLU PRO LEU PHE PRO GLU ASP MET ILE THR ASP LEU SEQRES 16 A 308 PRO LEU ARG LEU LEU ALA ALA GLU ILE VAL ARG GLU LYS SEQRES 17 A 308 ALA MET MET LEU THR ARG GLU GLU VAL PRO THR SER ILE SEQRES 18 A 308 ALA VAL LYS ILE ASN GLU ILE LYS PRO GLY ASP ALA ASN SEQRES 19 A 308 PRO ASN MET LEU VAL ILE LYS GLY GLU ILE ILE VAL ASP SEQRES 20 A 308 ARG GLU ASN LEU LYS PRO ILE ILE ILE GLY LYS LYS GLY SEQRES 21 A 308 GLN ARG LEU LYS GLU ILE GLY LYS ARG ALA ARG GLN GLU SEQRES 22 A 308 LEU GLU LEU ILE LEU GLY ARG PRO VAL TYR LEU GLU LEU SEQRES 23 A 308 TRP VAL LYS VAL VAL PRO ASP TRP ARG ARG ARG PRO GLU SEQRES 24 A 308 TYR VAL ARG LEU PHE GLY TYR ALA LEU HET ALF A 401 5 HET GDP A 402 28 HET PEG A 403 6 HET TRS A 404 7 HET MG A 405 1 HET K A 406 1 HETNAM ALF TETRAFLUOROALUMINATE ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETSYN TRS TRIS BUFFER FORMUL 2 ALF AL F4 1- FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 PEG C4 H10 O3 FORMUL 5 TRS C4 H12 N O3 1+ FORMUL 6 MG MG 2+ FORMUL 7 K K 1+ FORMUL 8 HOH *94(H2 O) HELIX 1 AA1 GLY A 15 GLY A 25 1 11 HELIX 2 AA2 ASP A 69 ALA A 86 1 18 HELIX 3 AA3 ARG A 100 ILE A 111 1 12 HELIX 4 AA4 LYS A 112 ASN A 115 5 4 HELIX 5 AA5 LYS A 124 ILE A 128 5 5 HELIX 6 AA6 PRO A 130 ASN A 133 5 4 HELIX 7 AA7 VAL A 134 HIS A 145 1 12 HELIX 8 AA8 ASN A 161 LYS A 171 1 11 HELIX 9 AA9 PRO A 189 LEU A 205 1 17 HELIX 10 AB1 VAL A 210 THR A 212 5 3 HELIX 11 AB2 ARG A 241 ASN A 243 5 3 HELIX 12 AB3 LEU A 244 GLY A 250 1 7 HELIX 13 AB4 GLY A 253 GLY A 272 1 20 HELIX 14 AB5 ASP A 286 ARG A 289 5 4 HELIX 15 AB6 ARG A 290 PHE A 297 1 8 SHEET 1 AA1 6 VAL A 42 ILE A 48 0 SHEET 2 AA1 6 ALA A 52 ASP A 58 -1 O ILE A 54 N LYS A 46 SHEET 3 AA1 6 LYS A 2 GLY A 10 1 N ILE A 8 O LEU A 57 SHEET 4 AA1 6 VAL A 88 ASP A 94 1 O LEU A 90 N ALA A 7 SHEET 5 AA1 6 VAL A 118 ASN A 123 1 O ILE A 119 N ILE A 89 SHEET 6 AA1 6 ILE A 151 PRO A 153 1 O VAL A 152 N VAL A 120 SHEET 1 AA2 3 ILE A 214 PRO A 223 0 SHEET 2 AA2 3 LEU A 231 VAL A 239 -1 O ILE A 238 N ALA A 215 SHEET 3 AA2 3 VAL A 275 VAL A 283 1 O TRP A 280 N ILE A 237 LINK OD1 ASN A 13 K K A 406 1555 1555 2.75 LINK OG SER A 17 MG MG A 405 1555 1555 2.26 LINK O SER A 32 K K A 406 1555 1555 2.87 LINK O LYS A 34 K K A 406 1555 1555 2.78 LINK OG1 THR A 37 K K A 406 1555 1555 3.32 LINK OG1 THR A 38 MG MG A 405 1555 1555 2.16 LINK O3B GDP A 402 MG MG A 405 1555 1555 2.02 LINK O1B GDP A 402 K K A 406 1555 1555 3.04 LINK O1A GDP A 402 K K A 406 1555 1555 3.07 LINK MG MG A 405 O HOH A 513 1555 1555 2.28 LINK MG MG A 405 O HOH A 551 1555 1555 2.10 SITE 1 AC1 13 PRO A 12 ASN A 13 LYS A 16 ALA A 35 SITE 2 AC1 13 GLY A 36 THR A 37 THR A 38 GLY A 61 SITE 3 AC1 13 GDP A 402 MG A 405 K A 406 HOH A 513 SITE 4 AC1 13 HOH A 545 SITE 1 AC2 26 ASN A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC2 26 SER A 17 THR A 18 ILE A 31 SER A 32 SITE 3 AC2 26 PRO A 33 ASN A 123 LYS A 124 ASP A 126 SITE 4 AC2 26 LYS A 127 SER A 155 ALA A 156 LEU A 157 SITE 5 AC2 26 ALF A 401 MG A 405 K A 406 HOH A 513 SITE 6 AC2 26 HOH A 517 HOH A 519 HOH A 522 HOH A 539 SITE 7 AC2 26 HOH A 551 HOH A 564 SITE 1 AC3 5 LYS A 116 PRO A 117 VAL A 118 GLU A 150 SITE 2 AC3 5 HOH A 509 SITE 1 AC4 2 HIS A 142 HOH A 575 SITE 1 AC5 6 SER A 17 THR A 38 ALF A 401 GDP A 402 SITE 2 AC5 6 HOH A 513 HOH A 551 SITE 1 AC6 6 ASN A 13 SER A 32 LYS A 34 THR A 37 SITE 2 AC6 6 ALF A 401 GDP A 402 CRYST1 36.377 72.860 120.910 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027490 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008271 0.00000