HEADER OXIDOREDUCTASE 15-MAY-20 7C49 TITLE NICA2 WITH COFACTOR FAD AND SUBSTRATE NICOTINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINE OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA S16; SOURCE 3 ORGANISM_TAXID: 1042876; SOURCE 4 STRAIN: S16; SOURCE 5 GENE: PPS_4081; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, OXYDOREDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.XU,K.ZHANG REVDAT 3 27-MAR-24 7C49 1 REMARK REVDAT 2 16-DEC-20 7C49 1 JRNL REVDAT 1 03-JUN-20 7C49 0 JRNL AUTH H.TANG,K.ZHANG,H.HU,G.WU,W.WANG,X.ZHU,G.LIU,P.XU JRNL TITL MOLECULAR DECELERATION REGULATES TOXICANT RELEASE TO PREVENT JRNL TITL 2 CELL DAMAGE IN PSEUDOMONAS PUTIDA S16 (DSM 28022). JRNL REF MBIO V. 11 2020 JRNL REFN ESSN 2150-7511 JRNL PMID 32873764 JRNL DOI 10.1128/MBIO.02012-20 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 46537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2621 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3588 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.1800 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.2360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6656 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.98000 REMARK 3 B22 (A**2) : 2.98000 REMARK 3 B33 (A**2) : -5.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.054 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.041 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.303 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7048 ; 0.009 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 6430 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9556 ; 1.251 ; 1.871 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14860 ; 1.053 ; 2.917 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 861 ; 6.194 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 326 ;33.442 ;23.834 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1141 ;14.940 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 47 ;15.290 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1041 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7893 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1488 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 482 REMARK 3 ORIGIN FOR THE GROUP (A): -6.0340 -22.6150 15.9770 REMARK 3 T TENSOR REMARK 3 T11: 0.1040 T22: 0.0233 REMARK 3 T33: 0.0833 T12: -0.0100 REMARK 3 T13: 0.0020 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.5516 L22: 1.9779 REMARK 3 L33: 1.0414 L12: -0.1072 REMARK 3 L13: -0.0696 L23: -0.1131 REMARK 3 S TENSOR REMARK 3 S11: -0.0456 S12: -0.0315 S13: -0.1555 REMARK 3 S21: 0.1651 S22: 0.0519 S23: 0.0359 REMARK 3 S31: 0.2663 S32: -0.0484 S33: -0.0063 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 50 B 483 REMARK 3 ORIGIN FOR THE GROUP (A): 5.8320 -23.0590 -17.5920 REMARK 3 T TENSOR REMARK 3 T11: 0.1119 T22: 0.0455 REMARK 3 T33: 0.1165 T12: 0.0157 REMARK 3 T13: 0.0093 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.2004 L22: 1.9074 REMARK 3 L33: 0.9539 L12: -0.0437 REMARK 3 L13: -0.1066 L23: 0.1244 REMARK 3 S TENSOR REMARK 3 S11: -0.0458 S12: 0.0231 S13: -0.0967 REMARK 3 S21: -0.1281 S22: 0.0556 S23: -0.0562 REMARK 3 S31: 0.2726 S32: 0.0788 S33: -0.0098 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 7C49 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1300016993. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51361 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 81.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.52900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, TRIS-HCL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.43300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.21650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 123.64950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 21 REMARK 465 VAL A 22 REMARK 465 VAL A 23 REMARK 465 THR A 24 REMARK 465 ALA A 25 REMARK 465 GLY A 26 REMARK 465 VAL A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 LEU A 30 REMARK 465 GLY A 31 REMARK 465 ALA A 32 REMARK 465 ILE A 33 REMARK 465 ASP A 34 REMARK 465 ALA A 35 REMARK 465 ALA A 36 REMARK 465 SER A 37 REMARK 465 ALA A 38 REMARK 465 THR A 39 REMARK 465 GLN A 40 REMARK 465 LYS A 41 REMARK 465 THR A 42 REMARK 465 ASN A 43 REMARK 465 ARG A 44 REMARK 465 ALA A 45 REMARK 465 SER A 46 REMARK 465 THR A 47 REMARK 465 VAL A 48 REMARK 465 LEU A 483 REMARK 465 GLU A 484 REMARK 465 HIS A 485 REMARK 465 HIS A 486 REMARK 465 HIS A 487 REMARK 465 HIS A 488 REMARK 465 HIS A 489 REMARK 465 HIS A 490 REMARK 465 ALA B 21 REMARK 465 VAL B 22 REMARK 465 VAL B 23 REMARK 465 THR B 24 REMARK 465 ALA B 25 REMARK 465 GLY B 26 REMARK 465 VAL B 27 REMARK 465 ALA B 28 REMARK 465 GLY B 29 REMARK 465 LEU B 30 REMARK 465 GLY B 31 REMARK 465 ALA B 32 REMARK 465 ILE B 33 REMARK 465 ASP B 34 REMARK 465 ALA B 35 REMARK 465 ALA B 36 REMARK 465 SER B 37 REMARK 465 ALA B 38 REMARK 465 THR B 39 REMARK 465 GLN B 40 REMARK 465 LYS B 41 REMARK 465 THR B 42 REMARK 465 ASN B 43 REMARK 465 ARG B 44 REMARK 465 ALA B 45 REMARK 465 SER B 46 REMARK 465 THR B 47 REMARK 465 VAL B 48 REMARK 465 LYS B 49 REMARK 465 GLU B 445 REMARK 465 GLY B 446 REMARK 465 ARG B 447 REMARK 465 ILE B 448 REMARK 465 LEU B 449 REMARK 465 PHE B 450 REMARK 465 ALA B 451 REMARK 465 GLY B 452 REMARK 465 ALA B 453 REMARK 465 GLU B 454 REMARK 465 GLU B 484 REMARK 465 HIS B 485 REMARK 465 HIS B 486 REMARK 465 HIS B 487 REMARK 465 HIS B 488 REMARK 465 HIS B 489 REMARK 465 HIS B 490 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA B 444 C O REMARK 470 THR B 455 N REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 95 -157.98 -140.00 REMARK 500 ALA A 107 -26.85 -144.70 REMARK 500 GLU A 249 -71.08 -66.03 REMARK 500 THR A 250 34.89 -143.05 REMARK 500 SER A 371 167.28 172.09 REMARK 500 ALA A 426 -142.89 -110.42 REMARK 500 SER B 95 -157.67 -140.93 REMARK 500 ALA B 107 -26.65 -144.57 REMARK 500 GLU B 249 -71.63 -65.27 REMARK 500 THR B 250 34.75 -143.31 REMARK 500 SER B 371 167.07 172.14 REMARK 500 ALA B 426 -142.13 -109.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1197 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH B1205 DISTANCE = 6.26 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 HNL A 1002 REMARK 610 HNL B 1002 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HNL A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HNL B 1002 DBREF 7C49 A 21 482 UNP F8G0P2 F8G0P2_PSEP6 21 482 DBREF 7C49 B 21 482 UNP F8G0P2 F8G0P2_PSEP6 21 482 SEQADV 7C49 LEU A 483 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 GLU A 484 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS A 485 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS A 486 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS A 487 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS A 488 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS A 489 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS A 490 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 LEU B 483 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 GLU B 484 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS B 485 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS B 486 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS B 487 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS B 488 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS B 489 UNP F8G0P2 EXPRESSION TAG SEQADV 7C49 HIS B 490 UNP F8G0P2 EXPRESSION TAG SEQRES 1 A 470 ALA VAL VAL THR ALA GLY VAL ALA GLY LEU GLY ALA ILE SEQRES 2 A 470 ASP ALA ALA SER ALA THR GLN LYS THR ASN ARG ALA SER SEQRES 3 A 470 THR VAL LYS GLY GLY PHE ASP TYR ASP VAL VAL VAL VAL SEQRES 4 A 470 GLY GLY GLY PHE ALA GLY ALA THR ALA ALA ARG GLU CYS SEQRES 5 A 470 GLY LEU GLN GLY TYR ARG THR LEU LEU LEU GLU ALA ARG SEQRES 6 A 470 SER ARG LEU GLY GLY ARG THR PHE THR SER ARG PHE ALA SEQRES 7 A 470 GLY GLN GLU ILE GLU PHE GLY GLY ALA TRP VAL HIS TRP SEQRES 8 A 470 LEU GLN PRO HIS VAL TRP ALA GLU MET GLN ARG TYR GLY SEQRES 9 A 470 LEU GLY VAL VAL GLU ASP PRO LEU THR ASN LEU ASP LYS SEQRES 10 A 470 THR LEU ILE MET TYR ASN ASP GLY SER VAL GLU SER ILE SEQRES 11 A 470 SER PRO ASP GLU PHE GLY LYS ASN ILE ARG ILE ALA PHE SEQRES 12 A 470 GLU LYS LEU CYS HIS ASP ALA TRP GLU VAL PHE PRO ARG SEQRES 13 A 470 PRO HIS GLU PRO MET PHE THR GLU ARG ALA ARG GLU LEU SEQRES 14 A 470 ASP LYS SER SER VAL LEU ASP ARG ILE LYS THR LEU GLY SEQRES 15 A 470 LEU SER ARG LEU GLN GLN ALA GLN ILE ASN SER TYR MET SEQRES 16 A 470 ALA LEU TYR ALA GLY GLU THR THR ASP LYS PHE GLY LEU SEQRES 17 A 470 PRO GLY VAL LEU LYS LEU PHE ALA CYS GLY GLY TRP ASN SEQRES 18 A 470 TYR ASP ALA PHE MET ASP THR GLU THR HIS TYR ARG ILE SEQRES 19 A 470 GLN GLY GLY THR ILE GLY LEU ILE ASN ALA MET LEU THR SEQRES 20 A 470 ASP SER GLY ALA GLU VAL ARG MET SER VAL PRO VAL THR SEQRES 21 A 470 ALA VAL GLU GLN VAL ASN GLY GLY VAL LYS ILE LYS THR SEQRES 22 A 470 ASP ASP ASP GLU ILE ILE THR ALA GLY VAL VAL VAL MET SEQRES 23 A 470 THR VAL PRO LEU ASN THR TYR LYS HIS ILE GLY PHE THR SEQRES 24 A 470 PRO ALA LEU SER LYS GLY LYS GLN ARG PHE ILE LYS GLU SEQRES 25 A 470 GLY GLN LEU SER LYS GLY ALA LYS LEU TYR VAL HIS VAL SEQRES 26 A 470 LYS GLN ASN LEU GLY ARG VAL PHE ALA PHE ALA ASP GLU SEQRES 27 A 470 GLN GLN PRO LEU ASN TRP VAL GLN THR HIS ASP TYR SER SEQRES 28 A 470 ASP GLU LEU GLY THR ILE LEU SER ILE THR ILE ALA ARG SEQRES 29 A 470 LYS GLU THR ILE ASP VAL ASN ASP ARG ASP ALA VAL THR SEQRES 30 A 470 ARG GLU VAL GLN LYS MET PHE PRO GLY VAL GLU VAL LEU SEQRES 31 A 470 GLY THR ALA ALA TYR ASP TRP THR ALA ASP PRO PHE SER SEQRES 32 A 470 LEU GLY ALA TRP ALA ALA TYR GLY VAL GLY GLN LEU SER SEQRES 33 A 470 ARG LEU LYS ASP LEU GLN ALA ALA GLU GLY ARG ILE LEU SEQRES 34 A 470 PHE ALA GLY ALA GLU THR SER ASN GLY TRP HIS ALA ASN SEQRES 35 A 470 ILE ASP GLY ALA VAL GLU SER GLY LEU ARG ALA GLY ARG SEQRES 36 A 470 GLU VAL LYS GLN LEU LEU SER LEU GLU HIS HIS HIS HIS SEQRES 37 A 470 HIS HIS SEQRES 1 B 470 ALA VAL VAL THR ALA GLY VAL ALA GLY LEU GLY ALA ILE SEQRES 2 B 470 ASP ALA ALA SER ALA THR GLN LYS THR ASN ARG ALA SER SEQRES 3 B 470 THR VAL LYS GLY GLY PHE ASP TYR ASP VAL VAL VAL VAL SEQRES 4 B 470 GLY GLY GLY PHE ALA GLY ALA THR ALA ALA ARG GLU CYS SEQRES 5 B 470 GLY LEU GLN GLY TYR ARG THR LEU LEU LEU GLU ALA ARG SEQRES 6 B 470 SER ARG LEU GLY GLY ARG THR PHE THR SER ARG PHE ALA SEQRES 7 B 470 GLY GLN GLU ILE GLU PHE GLY GLY ALA TRP VAL HIS TRP SEQRES 8 B 470 LEU GLN PRO HIS VAL TRP ALA GLU MET GLN ARG TYR GLY SEQRES 9 B 470 LEU GLY VAL VAL GLU ASP PRO LEU THR ASN LEU ASP LYS SEQRES 10 B 470 THR LEU ILE MET TYR ASN ASP GLY SER VAL GLU SER ILE SEQRES 11 B 470 SER PRO ASP GLU PHE GLY LYS ASN ILE ARG ILE ALA PHE SEQRES 12 B 470 GLU LYS LEU CYS HIS ASP ALA TRP GLU VAL PHE PRO ARG SEQRES 13 B 470 PRO HIS GLU PRO MET PHE THR GLU ARG ALA ARG GLU LEU SEQRES 14 B 470 ASP LYS SER SER VAL LEU ASP ARG ILE LYS THR LEU GLY SEQRES 15 B 470 LEU SER ARG LEU GLN GLN ALA GLN ILE ASN SER TYR MET SEQRES 16 B 470 ALA LEU TYR ALA GLY GLU THR THR ASP LYS PHE GLY LEU SEQRES 17 B 470 PRO GLY VAL LEU LYS LEU PHE ALA CYS GLY GLY TRP ASN SEQRES 18 B 470 TYR ASP ALA PHE MET ASP THR GLU THR HIS TYR ARG ILE SEQRES 19 B 470 GLN GLY GLY THR ILE GLY LEU ILE ASN ALA MET LEU THR SEQRES 20 B 470 ASP SER GLY ALA GLU VAL ARG MET SER VAL PRO VAL THR SEQRES 21 B 470 ALA VAL GLU GLN VAL ASN GLY GLY VAL LYS ILE LYS THR SEQRES 22 B 470 ASP ASP ASP GLU ILE ILE THR ALA GLY VAL VAL VAL MET SEQRES 23 B 470 THR VAL PRO LEU ASN THR TYR LYS HIS ILE GLY PHE THR SEQRES 24 B 470 PRO ALA LEU SER LYS GLY LYS GLN ARG PHE ILE LYS GLU SEQRES 25 B 470 GLY GLN LEU SER LYS GLY ALA LYS LEU TYR VAL HIS VAL SEQRES 26 B 470 LYS GLN ASN LEU GLY ARG VAL PHE ALA PHE ALA ASP GLU SEQRES 27 B 470 GLN GLN PRO LEU ASN TRP VAL GLN THR HIS ASP TYR SER SEQRES 28 B 470 ASP GLU LEU GLY THR ILE LEU SER ILE THR ILE ALA ARG SEQRES 29 B 470 LYS GLU THR ILE ASP VAL ASN ASP ARG ASP ALA VAL THR SEQRES 30 B 470 ARG GLU VAL GLN LYS MET PHE PRO GLY VAL GLU VAL LEU SEQRES 31 B 470 GLY THR ALA ALA TYR ASP TRP THR ALA ASP PRO PHE SER SEQRES 32 B 470 LEU GLY ALA TRP ALA ALA TYR GLY VAL GLY GLN LEU SER SEQRES 33 B 470 ARG LEU LYS ASP LEU GLN ALA ALA GLU GLY ARG ILE LEU SEQRES 34 B 470 PHE ALA GLY ALA GLU THR SER ASN GLY TRP HIS ALA ASN SEQRES 35 B 470 ILE ASP GLY ALA VAL GLU SER GLY LEU ARG ALA GLY ARG SEQRES 36 B 470 GLU VAL LYS GLN LEU LEU SER LEU GLU HIS HIS HIS HIS SEQRES 37 B 470 HIS HIS HET FAD A1001 53 HET HNL A1002 12 HET FAD B1001 53 HET HNL B1002 12 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM HNL 5-[(2S)-1-METHYLPYRROLIDIN-2-YL]PYRIDIN-2-OL HETSYN HNL 6-HYDROXY-L-NICOTINE FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 HNL 2(C10 H14 N2 O) FORMUL 7 HOH *202(H2 O) HELIX 1 AA1 GLY A 62 GLN A 75 1 14 HELIX 2 AA2 GLN A 113 GLY A 124 1 12 HELIX 3 AA3 SER A 151 CYS A 167 1 17 HELIX 4 AA4 ASP A 169 PHE A 174 1 6 HELIX 5 AA5 THR A 183 ASP A 190 1 8 HELIX 6 AA6 SER A 193 LYS A 199 1 7 HELIX 7 AA7 SER A 204 GLY A 220 1 17 HELIX 8 AA8 GLY A 227 GLY A 238 1 12 HELIX 9 AA9 ASN A 241 THR A 248 1 8 HELIX 10 AB1 GLY A 256 GLY A 270 1 15 HELIX 11 AB2 PRO A 309 ILE A 316 5 8 HELIX 12 AB3 SER A 323 GLY A 333 1 11 HELIX 13 AB4 ARG A 384 ILE A 388 5 5 HELIX 14 AB5 ASP A 392 PHE A 404 1 13 HELIX 15 AB6 GLN A 434 ARG A 437 5 4 HELIX 16 AB7 LEU A 438 ALA A 443 1 6 HELIX 17 AB8 GLY A 452 SER A 456 5 5 HELIX 18 AB9 ASN A 462 SER A 482 1 21 HELIX 19 AC1 GLY B 62 GLN B 75 1 14 HELIX 20 AC2 GLN B 113 GLY B 124 1 12 HELIX 21 AC3 SER B 151 CYS B 167 1 17 HELIX 22 AC4 ASP B 169 PHE B 174 1 6 HELIX 23 AC5 THR B 183 ASP B 190 1 8 HELIX 24 AC6 SER B 193 LYS B 199 1 7 HELIX 25 AC7 SER B 204 GLY B 220 1 17 HELIX 26 AC8 GLY B 227 GLY B 238 1 12 HELIX 27 AC9 ASN B 241 THR B 248 1 8 HELIX 28 AD1 GLY B 256 GLY B 270 1 15 HELIX 29 AD2 PRO B 309 ILE B 316 5 8 HELIX 30 AD3 SER B 323 GLY B 333 1 11 HELIX 31 AD4 ARG B 384 ILE B 388 5 5 HELIX 32 AD5 ASP B 392 PHE B 404 1 13 HELIX 33 AD6 GLN B 434 ARG B 437 5 4 HELIX 34 AD7 LEU B 438 ALA B 443 1 6 HELIX 35 AD8 ASN B 462 SER B 482 1 21 SHEET 1 AA1 7 GLU A 272 ARG A 274 0 SHEET 2 AA1 7 THR A 79 LEU A 82 1 N LEU A 81 O GLU A 272 SHEET 3 AA1 7 TYR A 54 VAL A 59 1 N VAL A 58 O LEU A 80 SHEET 4 AA1 7 ILE A 298 MET A 306 1 O VAL A 305 N VAL A 59 SHEET 5 AA1 7 GLY A 288 THR A 293 -1 N VAL A 289 O ALA A 301 SHEET 6 AA1 7 VAL A 279 VAL A 285 -1 N ALA A 281 O LYS A 292 SHEET 7 AA1 7 GLY A 317 THR A 319 1 O THR A 319 N GLN A 284 SHEET 1 AA2 5 GLU A 272 ARG A 274 0 SHEET 2 AA2 5 THR A 79 LEU A 82 1 N LEU A 81 O GLU A 272 SHEET 3 AA2 5 TYR A 54 VAL A 59 1 N VAL A 58 O LEU A 80 SHEET 4 AA2 5 ILE A 298 MET A 306 1 O VAL A 305 N VAL A 59 SHEET 5 AA2 5 ILE A 448 PHE A 450 1 O LEU A 449 N MET A 306 SHEET 1 AA3 2 THR A 94 PHE A 97 0 SHEET 2 AA3 2 GLN A 100 GLU A 103 -1 O ILE A 102 N SER A 95 SHEET 1 AA4 2 VAL A 127 GLU A 129 0 SHEET 2 AA4 2 TYR A 252 ILE A 254 -1 O ARG A 253 N VAL A 128 SHEET 1 AA5 7 VAL A 147 ILE A 150 0 SHEET 2 AA5 7 LYS A 137 MET A 141 -1 N ILE A 140 O GLU A 148 SHEET 3 AA5 7 VAL A 352 ALA A 356 1 O PHE A 355 N MET A 141 SHEET 4 AA5 7 TRP A 364 SER A 371 -1 O VAL A 365 N ALA A 354 SHEET 5 AA5 7 GLY A 375 ILE A 382 -1 O GLY A 375 N SER A 371 SHEET 6 AA5 7 ALA A 339 VAL A 345 -1 N VAL A 343 O LEU A 378 SHEET 7 AA5 7 VAL A 409 TYR A 415 -1 O ALA A 413 N TYR A 342 SHEET 1 AA6 7 GLU B 272 ARG B 274 0 SHEET 2 AA6 7 THR B 79 LEU B 82 1 N LEU B 81 O GLU B 272 SHEET 3 AA6 7 TYR B 54 VAL B 59 1 N VAL B 58 O LEU B 80 SHEET 4 AA6 7 ILE B 298 MET B 306 1 O VAL B 305 N VAL B 59 SHEET 5 AA6 7 GLY B 288 THR B 293 -1 N VAL B 289 O ALA B 301 SHEET 6 AA6 7 VAL B 279 VAL B 285 -1 N ALA B 281 O LYS B 292 SHEET 7 AA6 7 GLY B 317 THR B 319 1 O THR B 319 N GLN B 284 SHEET 1 AA7 2 THR B 94 PHE B 97 0 SHEET 2 AA7 2 GLN B 100 GLU B 103 -1 O ILE B 102 N SER B 95 SHEET 1 AA8 3 TRP B 108 VAL B 109 0 SHEET 2 AA8 3 TYR B 252 ILE B 254 -1 O TYR B 252 N VAL B 109 SHEET 3 AA8 3 VAL B 127 GLU B 129 -1 N VAL B 128 O ARG B 253 SHEET 1 AA9 7 VAL B 147 ILE B 150 0 SHEET 2 AA9 7 LYS B 137 MET B 141 -1 N ILE B 140 O GLU B 148 SHEET 3 AA9 7 VAL B 352 ALA B 356 1 O PHE B 355 N MET B 141 SHEET 4 AA9 7 TRP B 364 SER B 371 -1 O VAL B 365 N ALA B 354 SHEET 5 AA9 7 GLY B 375 ILE B 382 -1 O ILE B 377 N HIS B 368 SHEET 6 AA9 7 ALA B 339 VAL B 345 -1 N VAL B 343 O LEU B 378 SHEET 7 AA9 7 VAL B 409 ASP B 416 -1 O ALA B 413 N TYR B 342 CISPEP 1 THR A 319 PRO A 320 0 -3.62 CISPEP 2 THR B 319 PRO B 320 0 -4.39 SITE 1 AC1 40 VAL A 59 GLY A 60 GLY A 61 GLY A 62 SITE 2 AC1 40 PHE A 63 ALA A 64 LEU A 82 GLU A 83 SITE 3 AC1 40 ALA A 84 ARG A 85 GLY A 89 GLY A 90 SITE 4 AC1 40 ARG A 91 THR A 92 PHE A 104 GLY A 105 SITE 5 AC1 40 GLY A 106 ALA A 107 TRP A 108 PRO A 278 SITE 6 AC1 40 VAL A 279 THR A 307 VAL A 308 PRO A 309 SITE 7 AC1 40 TRP A 417 PHE A 422 ALA A 426 TRP A 427 SITE 8 AC1 40 GLY A 452 ALA A 453 ALA A 461 ASN A 462 SITE 9 AC1 40 ILE A 463 ALA A 466 HNL A1002 HOH A1109 SITE 10 AC1 40 HOH A1110 HOH A1123 HOH A1149 HOH A1152 SITE 1 AC2 6 LEU A 217 THR A 250 THR A 381 TRP A 427 SITE 2 AC2 6 ALA A 461 FAD A1001 SITE 1 AC3 38 VAL B 59 GLY B 60 GLY B 62 PHE B 63 SITE 2 AC3 38 ALA B 64 GLU B 83 ALA B 84 ARG B 85 SITE 3 AC3 38 GLY B 89 GLY B 90 ARG B 91 THR B 92 SITE 4 AC3 38 PHE B 104 GLY B 105 GLY B 106 ALA B 107 SITE 5 AC3 38 TRP B 108 PRO B 278 VAL B 279 THR B 307 SITE 6 AC3 38 VAL B 308 PRO B 309 TRP B 417 PHE B 422 SITE 7 AC3 38 ALA B 426 TRP B 427 ALA B 461 ASN B 462 SITE 8 AC3 38 ILE B 463 ALA B 466 HNL B1002 HOH B1101 SITE 9 AC3 38 HOH B1117 HOH B1124 HOH B1146 HOH B1148 SITE 10 AC3 38 HOH B1154 HOH B1155 SITE 1 AC4 8 LEU B 217 TYR B 218 THR B 250 TRP B 364 SITE 2 AC4 8 THR B 381 TRP B 427 ALA B 461 FAD B1001 CRYST1 81.787 81.787 164.866 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012227 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012227 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006066 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -1.000000 -0.000158 0.000133 0.00623 1 MTRIX2 2 -0.000158 1.000000 0.000274 0.00457 1 MTRIX3 2 -0.000133 0.000274 -1.000000 -1.46250 1