HEADER STRUCTURAL PROTEIN/TRANSFERASE/DNA 17-JUN-20 7CCQ TITLE STRUCTURE OF THE 1:1 CGAS-NUCLEOSOME COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3.1; COMPND 3 CHAIN: A, E; COMPND 4 SYNONYM: HISTONE H3/A,HISTONE H3/B,HISTONE H3/C,HISTONE H3/D,HISTONE COMPND 5 H3/F,HISTONE H3/H,HISTONE H3/I,HISTONE H3/J,HISTONE H3/K,HISTONE COMPND 6 H3/L; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: HISTONE H4; COMPND 10 CHAIN: B, F; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: HISTONE H2A TYPE 1-B/E; COMPND 14 CHAIN: C, G; COMPND 15 SYNONYM: HISTONE H2A.2,HISTONE H2A/A,HISTONE H2A/M; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: HISTONE H2B TYPE 1-J; COMPND 19 CHAIN: D, H; COMPND 20 SYNONYM: HISTONE H2B.1,HISTONE H2B.R,H2B/R; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 24 CHAIN: K; COMPND 25 SYNONYM: H-CGAS,2'3'-CGAMP SYNTHASE,MAB-21 DOMAIN-CONTAINING PROTEIN COMPND 26 1; COMPND 27 EC: 2.7.7.86; COMPND 28 ENGINEERED: YES; COMPND 29 MOL_ID: 6; COMPND 30 MOLECULE: DNA (147-MER); COMPND 31 CHAIN: I; COMPND 32 ENGINEERED: YES; COMPND 33 MOL_ID: 7; COMPND 34 MOLECULE: DNA (147-MER); COMPND 35 CHAIN: J; COMPND 36 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: H3C1, H3FA, HIST1H3A, H3C2, H3FL, HIST1H3B, H3C3, H3FC SOURCE 6 HIST1H3C, H3C4, H3FB, HIST1H3D, H3C6, H3FD, HIST1H3E, H3C7, H3FI, SOURCE 7 HIST1H3F, H3C8, H3FH, HIST1H3G, H3C10, H3FK, HIST1H3H, H3C11, H3FF, SOURCE 8 HIST1H3I, H3C12, H3FJ, HIST1H3J; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 GENE: H2AC4, H2AFM, HIST1H2AB, H2AC8, H2AFA, HIST1H2AE; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 24 MOL_ID: 4; SOURCE 25 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 26 ORGANISM_COMMON: HUMAN; SOURCE 27 ORGANISM_TAXID: 9606; SOURCE 28 GENE: H2BC11, H2BFR, HIST1H2BJ; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 31 MOL_ID: 5; SOURCE 32 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 33 ORGANISM_COMMON: HUMAN; SOURCE 34 ORGANISM_TAXID: 9606; SOURCE 35 GENE: CGAS, C6ORF150, MB21D1; SOURCE 36 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 37 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 38 MOL_ID: 6; SOURCE 39 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 40 ORGANISM_COMMON: HUMAN; SOURCE 41 ORGANISM_TAXID: 9606; SOURCE 42 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 43 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 44 MOL_ID: 7; SOURCE 45 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 46 ORGANISM_COMMON: HUMAN; SOURCE 47 ORGANISM_TAXID: 9606; SOURCE 48 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 49 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CGAS, NUCLEOSOME, INHIBITION, CRYO-EM, IMMUNE SYSTEM, STRUCTURAL KEYWDS 2 PROTEIN-TRANSFERASE-DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR D.CAO,X.HAN,X.FAN,R.M.XU,X.ZHANG REVDAT 4 27-MAR-24 7CCQ 1 REMARK REVDAT 3 23-DEC-20 7CCQ 1 JRNL REVDAT 2 11-NOV-20 7CCQ 1 JRNL REVDAT 1 07-OCT-20 7CCQ 0 JRNL AUTH D.CAO,X.HAN,X.FAN,R.M.XU,X.ZHANG JRNL TITL STRUCTURAL BASIS FOR NUCLEOSOME-MEDIATED INHIBITION OF CGAS JRNL TITL 2 ACTIVITY. JRNL REF CELL RES. V. 30 1088 2020 JRNL REFN ISSN 1001-0602 JRNL PMID 33051594 JRNL DOI 10.1038/S41422-020-00422-4 REMARK 2 REMARK 2 RESOLUTION. 3.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.800 REMARK 3 NUMBER OF PARTICLES : 133590 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7CCQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1300017378. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : THE CGAS-NUCLEOSOME COMPLEX IN REMARK 245 1:1 MOLAR RATIO REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI ARCTICA REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: UNDECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, K, I, REMARK 350 AND CHAINS: J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 38 REMARK 465 HIS A 39 REMARK 465 ALA A 135 REMARK 465 ARG B 23 REMARK 465 LYS C 15 REMARK 465 ALA D 124 REMARK 465 GLY F 102 REMARK 465 PRO G 117 REMARK 465 GLY K 212 REMARK 465 SER K 213 REMARK 465 TYR K 214 REMARK 465 GLU K 521 REMARK 465 PHE K 522 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS K 427 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA I -55 O3' DA I -55 C3' -0.043 REMARK 500 DT I -46 O3' DT I -46 C3' -0.045 REMARK 500 DG I -44 O3' DG I -44 C3' -0.048 REMARK 500 DG I -37 O3' DG I -37 C3' -0.054 REMARK 500 DG I -36 O3' DG I -36 C3' -0.052 REMARK 500 DT I -29 O3' DT I -29 C3' -0.055 REMARK 500 DC I -11 O3' DC I -11 C3' -0.048 REMARK 500 DG I -10 O3' DG I -10 C3' -0.045 REMARK 500 DC I -9 O3' DC I -9 C3' -0.048 REMARK 500 DG I -6 O3' DG I -6 C3' -0.044 REMARK 500 DG I -5 O3' DG I -5 C3' -0.044 REMARK 500 DG I -4 O3' DG I -4 C3' -0.063 REMARK 500 DA I -3 O3' DA I -3 C3' -0.042 REMARK 500 DC I -2 O3' DC I -2 C3' -0.044 REMARK 500 DA I -1 O3' DA I -1 C3' -0.037 REMARK 500 DG I 0 O3' DG I 0 C3' -0.047 REMARK 500 DG I 4 O3' DG I 4 C3' -0.047 REMARK 500 DA I 6 O3' DA I 6 C3' -0.046 REMARK 500 DG I 8 O3' DG I 8 C3' -0.064 REMARK 500 DG I 27 O3' DG I 27 C3' -0.037 REMARK 500 DA I 28 O3' DA I 28 C3' -0.038 REMARK 500 DC I 30 O3' DC I 30 C3' -0.041 REMARK 500 DC I 37 O3' DC I 37 C3' -0.050 REMARK 500 DT I 45 O3' DT I 45 C3' -0.043 REMARK 500 DG J -34 O3' DG J -34 C3' -0.040 REMARK 500 DC J -29 O3' DC J -29 C3' -0.038 REMARK 500 DA J -25 O3' DA J -25 C3' -0.037 REMARK 500 DG J -24 O3' DG J -24 C3' -0.049 REMARK 500 DT J -16 O3' DT J -16 C3' -0.038 REMARK 500 DT J -6 O3' DT J -6 C3' -0.046 REMARK 500 DA J -5 O3' DA J -5 C3' -0.050 REMARK 500 DC J -4 O3' DC J -4 C3' -0.043 REMARK 500 DG J -3 O3' DG J -3 C3' -0.038 REMARK 500 DC J -2 O3' DC J -2 C3' -0.043 REMARK 500 DT J 3 O3' DT J 3 C3' -0.046 REMARK 500 DC J 4 O3' DC J 4 C3' -0.072 REMARK 500 DC J 5 O3' DC J 5 C3' -0.056 REMARK 500 DC J 6 O3' DC J 6 C3' -0.069 REMARK 500 DC J 7 O3' DC J 7 C3' -0.054 REMARK 500 DA J 16 O3' DA J 16 C3' -0.042 REMARK 500 DG J 27 O3' DG J 27 C3' -0.055 REMARK 500 DA J 32 O3' DA J 32 C3' -0.037 REMARK 500 DT J 34 O3' DT J 34 C3' -0.042 REMARK 500 DC J 36 O3' DC J 36 C3' -0.043 REMARK 500 DC J 37 O3' DC J 37 C3' -0.038 REMARK 500 DT J 43 O3' DT J 43 C3' -0.039 REMARK 500 DC J 45 O3' DC J 45 C3' -0.036 REMARK 500 DT J 55 O3' DT J 55 C3' -0.037 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA I -73 O4' - C1' - N9 ANGL. DEV. = -4.4 DEGREES REMARK 500 DC I -52 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG I -49 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DA I -41 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG I -35 O4' - C1' - N9 ANGL. DEV. = -6.3 DEGREES REMARK 500 DC I -27 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG I -8 O4' - C1' - N9 ANGL. DEV. = -5.9 DEGREES REMARK 500 DA I -3 O4' - C1' - N9 ANGL. DEV. = -5.4 DEGREES REMARK 500 DC I 3 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT I 31 O5' - C5' - C4' ANGL. DEV. = -5.8 DEGREES REMARK 500 DT I 31 O4' - C1' - C2' ANGL. DEV. = 3.2 DEGREES REMARK 500 DT I 31 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT I 44 O4' - C1' - N1 ANGL. DEV. = 3.7 DEGREES REMARK 500 DC I 60 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG I 63 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC I 71 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG J -68 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG J -58 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DA J -45 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT J -43 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC J -27 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DA J -25 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DA J -14 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG J -7 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC J -2 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG J -1 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC J 5 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DT J 13 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT J 43 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC J 51 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DA J 57 O4' - C1' - N9 ANGL. DEV. = -4.3 DEGREES REMARK 500 DA J 61 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL D 48 -62.39 -95.41 REMARK 500 PRO E 43 3.30 -68.30 REMARK 500 ASP F 24 -5.09 68.52 REMARK 500 ASP K 178 36.51 -97.79 REMARK 500 PHE K 203 38.11 -140.72 REMARK 500 SER K 313 -20.53 66.76 REMARK 500 LYS K 315 16.52 54.33 REMARK 500 ARG K 339 57.05 -92.61 REMARK 500 LEU K 344 -65.15 -101.08 REMARK 500 GLU K 373 49.63 -91.65 REMARK 500 PHE K 424 30.25 -96.91 REMARK 500 LYS K 428 36.89 -94.77 REMARK 500 TRP K 455 31.62 -141.67 REMARK 500 GLU K 487 34.72 -99.25 REMARK 500 PHE K 491 40.98 -100.96 REMARK 500 PHE K 516 75.92 53.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO D 103 GLY D 104 -148.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DT I 31 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-30339 RELATED DB: EMDB REMARK 900 STRUCTURE OF THE 1:1 CGAS-NUCLEOSOME COMPLEX DBREF 7CCQ A 38 135 UNP P68431 H31_HUMAN 39 136 DBREF 7CCQ B 23 102 PDB 7CCQ 7CCQ 23 102 DBREF 7CCQ C 15 117 UNP P04908 H2A1B_HUMAN 16 118 DBREF 7CCQ D 32 124 UNP P06899 H2B1J_HUMAN 33 125 DBREF 7CCQ E 38 135 UNP P68431 H31_HUMAN 39 136 DBREF 7CCQ F 23 102 PDB 7CCQ 7CCQ 23 102 DBREF 7CCQ G 15 117 UNP P04908 H2A1B_HUMAN 16 118 DBREF 7CCQ H 32 124 UNP P06899 H2B1J_HUMAN 33 125 DBREF 7CCQ K 157 522 UNP Q8N884 CGAS_HUMAN 157 522 DBREF 7CCQ I -73 73 PDB 7CCQ 7CCQ -73 73 DBREF 7CCQ J -73 73 PDB 7CCQ 7CCQ -73 73 SEQRES 1 A 98 PRO HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU SEQRES 2 A 98 ILE ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG SEQRES 3 A 98 LYS LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN SEQRES 4 A 98 ASP PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL SEQRES 5 A 98 MET ALA LEU GLN GLU ALA CYS GLU ALA TYR LEU VAL GLY SEQRES 6 A 98 LEU PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS SEQRES 7 A 98 ARG VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG SEQRES 8 A 98 ARG ILE ARG GLY GLU ARG ALA SEQRES 1 B 80 ARG ASP ASN ILE GLN GLY ILE THR LYS PRO ALA ILE ARG SEQRES 2 B 80 ARG LEU ALA ARG ARG GLY GLY VAL LYS ARG ILE SER GLY SEQRES 3 B 80 LEU ILE TYR GLU GLU THR ARG GLY VAL LEU LYS VAL PHE SEQRES 4 B 80 LEU GLU ASN VAL ILE ARG ASP ALA VAL THR TYR THR GLU SEQRES 5 B 80 HIS ALA LYS ARG LYS THR VAL THR ALA MET ASP VAL VAL SEQRES 6 B 80 TYR ALA LEU LYS ARG GLN GLY ARG THR LEU TYR GLY PHE SEQRES 7 B 80 GLY GLY SEQRES 1 C 103 LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE PRO VAL SEQRES 2 C 103 GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN TYR SER SEQRES 3 C 103 GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU ALA ALA SEQRES 4 C 103 VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU LEU ALA SEQRES 5 C 103 GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG ILE ILE SEQRES 6 C 103 PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP GLU GLU SEQRES 7 C 103 LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA GLN GLY SEQRES 8 C 103 GLY VAL LEU PRO ASN ILE GLN ALA VAL LEU LEU PRO SEQRES 1 D 93 SER ARG LYS GLU SER TYR SER ILE TYR VAL TYR LYS VAL SEQRES 2 D 93 LEU LYS GLN VAL HIS PRO ASP THR GLY ILE SER SER LYS SEQRES 3 D 93 ALA MET GLY ILE MET ASN SER PHE VAL ASN ASP ILE PHE SEQRES 4 D 93 GLU ARG ILE ALA GLY GLU ALA SER ARG LEU ALA HIS TYR SEQRES 5 D 93 ASN LYS ARG SER THR ILE THR SER ARG GLU ILE GLN THR SEQRES 6 D 93 ALA VAL ARG LEU LEU LEU PRO GLY GLU LEU ALA LYS HIS SEQRES 7 D 93 ALA VAL SER GLU GLY THR LYS ALA VAL THR LYS TYR THR SEQRES 8 D 93 SER ALA SEQRES 1 E 98 PRO HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU SEQRES 2 E 98 ILE ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG SEQRES 3 E 98 LYS LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN SEQRES 4 E 98 ASP PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL SEQRES 5 E 98 MET ALA LEU GLN GLU ALA CYS GLU ALA TYR LEU VAL GLY SEQRES 6 E 98 LEU PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS SEQRES 7 E 98 ARG VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG SEQRES 8 E 98 ARG ILE ARG GLY GLU ARG ALA SEQRES 1 F 80 ARG ASP ASN ILE GLN GLY ILE THR LYS PRO ALA ILE ARG SEQRES 2 F 80 ARG LEU ALA ARG ARG GLY GLY VAL LYS ARG ILE SER GLY SEQRES 3 F 80 LEU ILE TYR GLU GLU THR ARG GLY VAL LEU LYS VAL PHE SEQRES 4 F 80 LEU GLU ASN VAL ILE ARG ASP ALA VAL THR TYR THR GLU SEQRES 5 F 80 HIS ALA LYS ARG LYS THR VAL THR ALA MET ASP VAL VAL SEQRES 6 F 80 TYR ALA LEU LYS ARG GLN GLY ARG THR LEU TYR GLY PHE SEQRES 7 F 80 GLY GLY SEQRES 1 G 103 LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE PRO VAL SEQRES 2 G 103 GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN TYR SER SEQRES 3 G 103 GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU ALA ALA SEQRES 4 G 103 VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU LEU ALA SEQRES 5 G 103 GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG ILE ILE SEQRES 6 G 103 PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP GLU GLU SEQRES 7 G 103 LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA GLN GLY SEQRES 8 G 103 GLY VAL LEU PRO ASN ILE GLN ALA VAL LEU LEU PRO SEQRES 1 H 93 SER ARG LYS GLU SER TYR SER ILE TYR VAL TYR LYS VAL SEQRES 2 H 93 LEU LYS GLN VAL HIS PRO ASP THR GLY ILE SER SER LYS SEQRES 3 H 93 ALA MET GLY ILE MET ASN SER PHE VAL ASN ASP ILE PHE SEQRES 4 H 93 GLU ARG ILE ALA GLY GLU ALA SER ARG LEU ALA HIS TYR SEQRES 5 H 93 ASN LYS ARG SER THR ILE THR SER ARG GLU ILE GLN THR SEQRES 6 H 93 ALA VAL ARG LEU LEU LEU PRO GLY GLU LEU ALA LYS HIS SEQRES 7 H 93 ALA VAL SER GLU GLY THR LYS ALA VAL THR LYS TYR THR SEQRES 8 H 93 SER ALA SEQRES 1 K 366 ASP ALA ALA PRO GLY ALA SER LYS LEU ARG ALA VAL LEU SEQRES 2 K 366 GLU LYS LEU LYS LEU SER ARG ASP ASP ILE SER THR ALA SEQRES 3 K 366 ALA GLY MET VAL LYS GLY VAL VAL ASP HIS LEU LEU LEU SEQRES 4 K 366 ARG LEU LYS CYS ASP SER ALA PHE ARG GLY VAL GLY LEU SEQRES 5 K 366 LEU ASN THR GLY SER TYR TYR GLU HIS VAL LYS ILE SER SEQRES 6 K 366 ALA PRO ASN GLU PHE ASP VAL MET PHE LYS LEU GLU VAL SEQRES 7 K 366 PRO ARG ILE GLN LEU GLU GLU TYR SER ASN THR ARG ALA SEQRES 8 K 366 TYR TYR PHE VAL LYS PHE LYS ARG ASN PRO LYS GLU ASN SEQRES 9 K 366 PRO LEU SER GLN PHE LEU GLU GLY GLU ILE LEU SER ALA SEQRES 10 K 366 SER LYS MET LEU SER LYS PHE ARG LYS ILE ILE LYS GLU SEQRES 11 K 366 GLU ILE ASN ASP ILE LYS ASP THR ASP VAL ILE MET LYS SEQRES 12 K 366 ARG LYS ARG GLY GLY SER PRO ALA VAL THR LEU LEU ILE SEQRES 13 K 366 SER GLU LYS ILE SER VAL ASP ILE THR LEU ALA LEU GLU SEQRES 14 K 366 SER LYS SER SER TRP PRO ALA SER THR GLN GLU GLY LEU SEQRES 15 K 366 ARG ILE GLN ASN TRP LEU SER ALA LYS VAL ARG LYS GLN SEQRES 16 K 366 LEU ARG LEU LYS PRO PHE TYR LEU VAL PRO LYS HIS ALA SEQRES 17 K 366 LYS GLU GLY ASN GLY PHE GLN GLU GLU THR TRP ARG LEU SEQRES 18 K 366 SER PHE SER HIS ILE GLU LYS GLU ILE LEU ASN ASN HIS SEQRES 19 K 366 GLY LYS SER LYS THR CYS CYS GLU ASN LYS GLU GLU LYS SEQRES 20 K 366 CYS CYS ARG LYS ASP CYS LEU LYS LEU MET LYS TYR LEU SEQRES 21 K 366 LEU GLU GLN LEU LYS GLU ARG PHE LYS ASP LYS LYS HIS SEQRES 22 K 366 LEU ASP LYS PHE SER SER TYR HIS VAL LYS THR ALA PHE SEQRES 23 K 366 PHE HIS VAL CYS THR GLN ASN PRO GLN ASP SER GLN TRP SEQRES 24 K 366 ASP ARG LYS ASP LEU GLY LEU CYS PHE ASP ASN CYS VAL SEQRES 25 K 366 THR TYR PHE LEU GLN CYS LEU ARG THR GLU LYS LEU GLU SEQRES 26 K 366 ASN TYR PHE ILE PRO GLU PHE ASN LEU PHE SER SER ASN SEQRES 27 K 366 LEU ILE ASP LYS ARG SER LYS GLU PHE LEU THR LYS GLN SEQRES 28 K 366 ILE GLU TYR GLU ARG ASN ASN GLU PHE PRO VAL PHE ASP SEQRES 29 K 366 GLU PHE SEQRES 1 I 147 DA DC DA DG DG DA DT DG DT DA DT DA DT SEQRES 2 I 147 DA DT DC DT DG DA DC DA DC DG DT DG DC SEQRES 3 I 147 DC DT DG DG DA DG DA DC DT DA DG DG DG SEQRES 4 I 147 DA DG DT DA DA DT DC DC DC DC DT DT DG SEQRES 5 I 147 DG DC DG DG DT DT DA DA DA DA DC DG DC SEQRES 6 I 147 DG DG DG DG DG DA DC DA DG DC DG DC DG SEQRES 7 I 147 DT DA DC DG DT DG DC DG DT DT DT DA DA SEQRES 8 I 147 DG DC DG DG DT DG DC DT DA DG DA DG DC SEQRES 9 I 147 DT DG DT DC DT DA DC DG DA DC DC DA DA SEQRES 10 I 147 DT DT DG DA DG DC DG DG DC DC DT DC DG SEQRES 11 I 147 DG DC DA DC DC DG DG DG DA DT DT DC DT SEQRES 12 I 147 DC DC DA DG SEQRES 1 J 147 DC DT DG DG DA DG DA DA DT DC DC DC DG SEQRES 2 J 147 DG DT DG DC DC DG DA DG DG DC DC DG DC SEQRES 3 J 147 DT DC DA DA DT DT DG DG DT DC DG DT DA SEQRES 4 J 147 DG DA DC DA DG DC DT DC DT DA DG DC DA SEQRES 5 J 147 DC DC DG DC DT DT DA DA DA DC DG DC DA SEQRES 6 J 147 DC DG DT DA DC DG DC DG DC DT DG DT DC SEQRES 7 J 147 DC DC DC DC DG DC DG DT DT DT DT DA DA SEQRES 8 J 147 DC DC DG DC DC DA DA DG DG DG DG DA DT SEQRES 9 J 147 DT DA DC DT DC DC DC DT DA DG DT DC DT SEQRES 10 J 147 DC DC DA DG DG DC DA DC DG DT DG DT DC SEQRES 11 J 147 DA DG DA DT DA DT DA DT DA DC DA DT DC SEQRES 12 J 147 DC DT DG DT HELIX 1 AA1 GLY A 44 SER A 57 1 14 HELIX 2 AA2 ARG A 63 LYS A 79 1 17 HELIX 3 AA3 GLN A 85 ALA A 114 1 30 HELIX 4 AA4 MET A 120 GLY A 132 1 13 HELIX 5 AA5 ASN B 25 ILE B 29 5 5 HELIX 6 AA6 THR B 30 GLY B 42 1 13 HELIX 7 AA7 LEU B 49 ALA B 76 1 28 HELIX 8 AA8 THR B 82 GLY B 94 1 13 HELIX 9 AA9 ARG C 17 ALA C 21 1 5 HELIX 10 AB1 PRO C 26 GLY C 37 1 12 HELIX 11 AB2 ALA C 45 ASN C 73 1 29 HELIX 12 AB3 ILE C 79 ASP C 90 1 12 HELIX 13 AB4 ASP C 90 LEU C 97 1 8 HELIX 14 AB5 TYR D 37 HIS D 49 1 13 HELIX 15 AB6 SER D 55 ASN D 84 1 30 HELIX 16 AB7 THR D 90 LEU D 102 1 13 HELIX 17 AB8 PRO D 103 SER D 123 1 21 HELIX 18 AB9 GLY E 44 SER E 57 1 14 HELIX 19 AC1 ARG E 63 LYS E 79 1 17 HELIX 20 AC2 GLN E 85 ALA E 114 1 30 HELIX 21 AC3 MET E 120 GLY E 132 1 13 HELIX 22 AC4 ASN F 25 ILE F 29 5 5 HELIX 23 AC5 THR F 30 GLY F 41 1 12 HELIX 24 AC6 LEU F 49 ALA F 76 1 28 HELIX 25 AC7 THR F 82 GLY F 94 1 13 HELIX 26 AC8 THR G 16 GLY G 22 1 7 HELIX 27 AC9 PRO G 26 GLY G 37 1 12 HELIX 28 AD1 ALA G 45 ASN G 73 1 29 HELIX 29 AD2 ILE G 79 ASP G 90 1 12 HELIX 30 AD3 ASP G 90 LEU G 97 1 8 HELIX 31 AD4 TYR H 37 HIS H 49 1 13 HELIX 32 AD5 SER H 55 ASN H 84 1 30 HELIX 33 AD6 THR H 90 LEU H 102 1 13 HELIX 34 AD7 PRO H 103 ALA H 124 1 22 HELIX 35 AD8 GLY K 161 ARG K 176 1 16 HELIX 36 AD9 ASP K 178 LYS K 198 1 21 HELIX 37 AE1 ASP K 200 ARG K 204 5 5 HELIX 38 AE2 ASN K 260 LEU K 266 1 7 HELIX 39 AE3 SER K 272 ASN K 289 1 18 HELIX 40 AE4 PRO K 331 GLN K 335 5 5 HELIX 41 AE5 SER K 345 LEU K 354 1 10 HELIX 42 AE6 PHE K 379 ASN K 389 1 11 HELIX 43 AE7 CYS K 405 PHE K 424 1 20 HELIX 44 AE8 LYS K 425 LYS K 427 5 3 HELIX 45 AE9 SER K 434 ASN K 449 1 16 HELIX 46 AF1 ASP K 452 LYS K 458 5 7 HELIX 47 AF2 ASP K 459 THR K 477 1 19 HELIX 48 AF3 ASP K 497 ASN K 513 1 17 SHEET 1 AA1 2 ARG A 83 PHE A 84 0 SHEET 2 AA1 2 THR B 80 VAL B 81 1 O VAL B 81 N ARG A 83 SHEET 1 AA2 2 THR A 118 ILE A 119 0 SHEET 2 AA2 2 ARG B 45 ILE B 46 1 O ARG B 45 N ILE A 119 SHEET 1 AA3 2 THR B 96 TYR B 98 0 SHEET 2 AA3 2 VAL G 100 ILE G 102 1 O THR G 101 N THR B 96 SHEET 1 AA4 2 ARG C 42 VAL C 43 0 SHEET 2 AA4 2 THR D 88 ILE D 89 1 O ILE D 89 N ARG C 42 SHEET 1 AA5 2 ARG C 77 ILE C 78 0 SHEET 2 AA5 2 GLY D 53 ILE D 54 1 O GLY D 53 N ILE C 78 SHEET 1 AA6 2 THR C 101 ILE C 102 0 SHEET 2 AA6 2 LEU F 97 TYR F 98 1 O TYR F 98 N THR C 101 SHEET 1 AA7 2 ARG E 83 PHE E 84 0 SHEET 2 AA7 2 THR F 80 VAL F 81 1 O VAL F 81 N ARG E 83 SHEET 1 AA8 2 THR E 118 ILE E 119 0 SHEET 2 AA8 2 ARG F 45 ILE F 46 1 O ARG F 45 N ILE E 119 SHEET 1 AA9 2 ARG G 42 VAL G 43 0 SHEET 2 AA9 2 THR H 88 ILE H 89 1 O ILE H 89 N ARG G 42 SHEET 1 AB1 2 ARG G 77 ILE G 78 0 SHEET 2 AB1 2 GLY H 53 ILE H 54 1 O GLY H 53 N ILE G 78 SHEET 1 AB2 4 VAL K 206 LEU K 208 0 SHEET 2 AB2 4 MET K 229 LEU K 232 -1 O LYS K 231 N GLY K 207 SHEET 3 AB2 4 SER K 317 LEU K 322 1 O THR K 321 N PHE K 230 SHEET 4 AB2 4 GLU K 225 PHE K 226 1 N PHE K 226 O SER K 317 SHEET 1 AB3 5 VAL K 206 LEU K 208 0 SHEET 2 AB3 5 MET K 229 LEU K 232 -1 O LYS K 231 N GLY K 207 SHEET 3 AB3 5 SER K 317 LEU K 322 1 O THR K 321 N PHE K 230 SHEET 4 AB3 5 VAL K 308 ILE K 312 -1 N LEU K 310 O VAL K 318 SHEET 5 AB3 5 VAL K 296 MET K 298 -1 N ILE K 297 O LEU K 311 SHEET 1 AB4 2 ILE K 237 GLU K 241 0 SHEET 2 AB4 2 TYR K 249 PHE K 253 -1 O PHE K 250 N GLU K 240 SHEET 1 AB5 3 LEU K 324 SER K 326 0 SHEET 2 AB5 3 PHE K 357 PRO K 361 -1 O LEU K 359 N LEU K 324 SHEET 3 AB5 3 TRP K 375 SER K 378 -1 O ARG K 376 N VAL K 360 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000