HEADER HYDROLASE 26-JUN-20 7CFL TITLE X-RAY STRUCTURE OF AUTOLYSIN ACD24020 CATALYTIC DOMAIN FROM TITLE 2 CLOSTRIDIUM DIFFICILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CELL WALL HYDROLASE PHOSPHATASE-ASSOCIATED COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B, C, D; COMPND 5 SYNONYM: AUTOLYSIN; COMPND 6 EC: 3.4.-.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIOIDES DIFFICILE; SOURCE 3 ORGANISM_TAXID: 1496; SOURCE 4 GENE: CD630_24020; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENDOPEPTIDASE, AUTOLYSIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.KAMITORI,E.TAMAI REVDAT 3 29-NOV-23 7CFL 1 REMARK REVDAT 2 12-MAY-21 7CFL 1 JRNL REVDAT 1 25-NOV-20 7CFL 0 JRNL AUTH H.SEKIYA,E.TAMAI,J.KAWASAKI,K.MURAKAMI,S.KAMITORI JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATIONS OF THE NOVEL JRNL TITL 2 AUTOLYSIN ACD24020 FROM CLOSTRIDIOIDES DIFFICILE AND ITS JRNL TITL 3 FULL-FUNCTION CATALYTIC DOMAIN AS A LYTIC ENZYME. JRNL REF MOL.MICROBIOL. V. 115 684 2021 JRNL REFN ESSN 1365-2958 JRNL PMID 33140473 JRNL DOI 10.1111/MMI.14636 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 69608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3667 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.56 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.60 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4927 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 271 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3759 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.19000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : -0.17000 REMARK 3 B13 (A**2) : 0.30000 REMARK 3 B23 (A**2) : -0.22000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.112 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.985 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3948 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3539 ; 0.002 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5342 ; 1.578 ; 1.634 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8212 ; 1.450 ; 1.583 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 510 ; 7.152 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 191 ;29.292 ;20.576 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 641 ;13.147 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;19.316 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 496 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4522 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 902 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1989 ; 3.684 ; 2.649 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1988 ; 3.681 ; 4.461 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2480 ; 4.227 ; 3.976 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2481 ; 4.226 ; 5.293 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1959 ; 4.766 ; 2.974 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1958 ; 4.765 ;18.402 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2851 ; 5.463 ; 4.320 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4417 ; 5.348 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4392 ; 5.345 ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3948 ; 6.451 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7CFL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1300017526. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73725 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 36.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.05000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3H41 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM AMMONIUM CITRATE DIBASIC, 20% REMARK 280 (W/V) POLYETHYLENE GLYCOL 3,350, PH 5.1, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 259 REMARK 465 ASN A 260 REMARK 465 HIS A 261 REMARK 465 LYS A 262 REMARK 465 VAL A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 HIS A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 465 MET B 259 REMARK 465 ASN B 260 REMARK 465 HIS B 261 REMARK 465 LYS B 262 REMARK 465 VAL B 263 REMARK 465 HIS B 264 REMARK 465 HIS B 265 REMARK 465 HIS B 266 REMARK 465 HIS B 267 REMARK 465 HIS B 268 REMARK 465 HIS B 269 REMARK 465 GLN B 345 REMARK 465 GLY B 346 REMARK 465 SER B 347 REMARK 465 ASN B 348 REMARK 465 ASN B 349 REMARK 465 MET C 259 REMARK 465 ASN C 260 REMARK 465 HIS C 261 REMARK 465 LYS C 262 REMARK 465 VAL C 263 REMARK 465 HIS C 264 REMARK 465 HIS C 265 REMARK 465 HIS C 266 REMARK 465 HIS C 267 REMARK 465 HIS C 268 REMARK 465 HIS C 269 REMARK 465 GLN C 345 REMARK 465 GLY C 346 REMARK 465 SER C 347 REMARK 465 ASN C 348 REMARK 465 ASN C 349 REMARK 465 MET D 259 REMARK 465 ASN D 260 REMARK 465 HIS D 261 REMARK 465 LYS D 262 REMARK 465 VAL D 263 REMARK 465 HIS D 264 REMARK 465 HIS D 265 REMARK 465 HIS D 266 REMARK 465 HIS D 267 REMARK 465 HIS D 268 REMARK 465 HIS D 269 REMARK 465 GLN D 345 REMARK 465 GLY D 346 REMARK 465 SER D 347 REMARK 465 ASN D 348 REMARK 465 ASN D 349 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 348 -161.08 -165.44 REMARK 500 VAL A 390 -62.32 -107.72 REMARK 500 GLU B 292 36.19 -140.23 REMARK 500 VAL B 390 -63.94 -108.52 REMARK 500 GLU C 292 41.11 -141.01 REMARK 500 VAL C 390 -61.11 -105.98 REMARK 500 SER D 336 128.12 -35.86 REMARK 500 ASP D 343 -167.68 -100.97 REMARK 500 ILE D 359 -61.36 -103.83 REMARK 500 VAL D 390 -61.03 -107.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FLC D 501 DBREF 7CFL A 271 396 UNP Q181Y8 Q181Y8_CLOD6 271 396 DBREF 7CFL B 271 396 UNP Q181Y8 Q181Y8_CLOD6 271 396 DBREF 7CFL C 271 396 UNP Q181Y8 Q181Y8_CLOD6 271 396 DBREF 7CFL D 271 396 UNP Q181Y8 Q181Y8_CLOD6 271 396 SEQADV 7CFL MET A 259 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL ASN A 260 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS A 261 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL LYS A 262 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL VAL A 263 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS A 264 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS A 265 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS A 266 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS A 267 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS A 268 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS A 269 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL MET A 270 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL MET B 259 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL ASN B 260 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS B 261 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL LYS B 262 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL VAL B 263 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS B 264 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS B 265 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS B 266 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS B 267 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS B 268 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS B 269 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL MET B 270 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL MET C 259 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL ASN C 260 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS C 261 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL LYS C 262 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL VAL C 263 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS C 264 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS C 265 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS C 266 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS C 267 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS C 268 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS C 269 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL MET C 270 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL MET D 259 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL ASN D 260 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS D 261 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL LYS D 262 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL VAL D 263 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS D 264 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS D 265 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS D 266 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS D 267 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS D 268 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL HIS D 269 UNP Q181Y8 EXPRESSION TAG SEQADV 7CFL MET D 270 UNP Q181Y8 EXPRESSION TAG SEQRES 1 A 138 MET ASN HIS LYS VAL HIS HIS HIS HIS HIS HIS MET GLY SEQRES 2 A 138 ALA ASP SER VAL ILE SER PHE ALA LYS THR LEU LEU GLY SEQRES 3 A 138 LYS PRO TYR VAL TRP GLY ALA GLU GLY PRO ASN SER PHE SEQRES 4 A 138 ASP CYS SER GLY PHE THR GLN TYR VAL MET LYS LYS SER SEQRES 5 A 138 VAL GLY VAL SER ILE PRO ARG VAL SER ARG ASP GLN SER SEQRES 6 A 138 LYS TYR GLY THR TYR VAL ASN ARG GLY ASP LEU ARG SER SEQRES 7 A 138 GLY ASP LEU VAL PHE PHE ASP THR GLN GLY SER ASN ASN SEQRES 8 A 138 GLY SER VAL SER HIS VAL GLY ILE TYR ILE GLY ASN GLY SEQRES 9 A 138 ASP MET ILE HIS ALA SER SER GLY SER SER LYS LYS VAL SEQRES 10 A 138 THR ILE SER ASN ILE ASN SER SER TYR TYR SER SER ARG SEQRES 11 A 138 TYR VAL ASN ALA ARG ARG VAL LEU SEQRES 1 B 138 MET ASN HIS LYS VAL HIS HIS HIS HIS HIS HIS MET GLY SEQRES 2 B 138 ALA ASP SER VAL ILE SER PHE ALA LYS THR LEU LEU GLY SEQRES 3 B 138 LYS PRO TYR VAL TRP GLY ALA GLU GLY PRO ASN SER PHE SEQRES 4 B 138 ASP CYS SER GLY PHE THR GLN TYR VAL MET LYS LYS SER SEQRES 5 B 138 VAL GLY VAL SER ILE PRO ARG VAL SER ARG ASP GLN SER SEQRES 6 B 138 LYS TYR GLY THR TYR VAL ASN ARG GLY ASP LEU ARG SER SEQRES 7 B 138 GLY ASP LEU VAL PHE PHE ASP THR GLN GLY SER ASN ASN SEQRES 8 B 138 GLY SER VAL SER HIS VAL GLY ILE TYR ILE GLY ASN GLY SEQRES 9 B 138 ASP MET ILE HIS ALA SER SER GLY SER SER LYS LYS VAL SEQRES 10 B 138 THR ILE SER ASN ILE ASN SER SER TYR TYR SER SER ARG SEQRES 11 B 138 TYR VAL ASN ALA ARG ARG VAL LEU SEQRES 1 C 138 MET ASN HIS LYS VAL HIS HIS HIS HIS HIS HIS MET GLY SEQRES 2 C 138 ALA ASP SER VAL ILE SER PHE ALA LYS THR LEU LEU GLY SEQRES 3 C 138 LYS PRO TYR VAL TRP GLY ALA GLU GLY PRO ASN SER PHE SEQRES 4 C 138 ASP CYS SER GLY PHE THR GLN TYR VAL MET LYS LYS SER SEQRES 5 C 138 VAL GLY VAL SER ILE PRO ARG VAL SER ARG ASP GLN SER SEQRES 6 C 138 LYS TYR GLY THR TYR VAL ASN ARG GLY ASP LEU ARG SER SEQRES 7 C 138 GLY ASP LEU VAL PHE PHE ASP THR GLN GLY SER ASN ASN SEQRES 8 C 138 GLY SER VAL SER HIS VAL GLY ILE TYR ILE GLY ASN GLY SEQRES 9 C 138 ASP MET ILE HIS ALA SER SER GLY SER SER LYS LYS VAL SEQRES 10 C 138 THR ILE SER ASN ILE ASN SER SER TYR TYR SER SER ARG SEQRES 11 C 138 TYR VAL ASN ALA ARG ARG VAL LEU SEQRES 1 D 138 MET ASN HIS LYS VAL HIS HIS HIS HIS HIS HIS MET GLY SEQRES 2 D 138 ALA ASP SER VAL ILE SER PHE ALA LYS THR LEU LEU GLY SEQRES 3 D 138 LYS PRO TYR VAL TRP GLY ALA GLU GLY PRO ASN SER PHE SEQRES 4 D 138 ASP CYS SER GLY PHE THR GLN TYR VAL MET LYS LYS SER SEQRES 5 D 138 VAL GLY VAL SER ILE PRO ARG VAL SER ARG ASP GLN SER SEQRES 6 D 138 LYS TYR GLY THR TYR VAL ASN ARG GLY ASP LEU ARG SER SEQRES 7 D 138 GLY ASP LEU VAL PHE PHE ASP THR GLN GLY SER ASN ASN SEQRES 8 D 138 GLY SER VAL SER HIS VAL GLY ILE TYR ILE GLY ASN GLY SEQRES 9 D 138 ASP MET ILE HIS ALA SER SER GLY SER SER LYS LYS VAL SEQRES 10 D 138 THR ILE SER ASN ILE ASN SER SER TYR TYR SER SER ARG SEQRES 11 D 138 TYR VAL ASN ALA ARG ARG VAL LEU HET FLC A 501 13 HET FLC B 501 13 HET FLC C 501 13 HET FLC D 501 13 HETNAM FLC CITRATE ANION FORMUL 5 FLC 4(C6 H5 O7 3-) FORMUL 9 HOH *246(H2 O) HELIX 1 AA1 MET A 270 THR A 281 1 12 HELIX 2 AA2 ASP A 298 GLY A 312 1 15 HELIX 3 AA3 VAL A 318 SER A 323 1 6 HELIX 4 AA4 ASN A 330 LEU A 334 5 5 HELIX 5 AA5 SER A 382 SER A 387 1 6 HELIX 6 AA6 GLY B 271 LEU B 282 1 12 HELIX 7 AA7 ASP B 298 GLY B 312 1 15 HELIX 8 AA8 VAL B 318 SER B 323 1 6 HELIX 9 AA9 ASN B 330 LEU B 334 5 5 HELIX 10 AB1 SER B 382 SER B 387 1 6 HELIX 11 AB2 GLY C 271 THR C 281 1 11 HELIX 12 AB3 ASP C 298 GLY C 312 1 15 HELIX 13 AB4 VAL C 318 SER C 323 1 6 HELIX 14 AB5 ASN C 330 LEU C 334 5 5 HELIX 15 AB6 SER C 382 ARG C 388 1 7 HELIX 16 AB7 GLY D 271 LEU D 282 1 12 HELIX 17 AB8 ASP D 298 GLY D 312 1 15 HELIX 18 AB9 VAL D 318 SER D 323 1 6 HELIX 19 AC1 ASN D 330 LEU D 334 5 5 HELIX 20 AC2 SER D 382 SER D 387 1 6 SHEET 1 AA1 6 THR A 327 VAL A 329 0 SHEET 2 AA1 6 TYR A 389 ARG A 394 -1 O ARG A 394 N THR A 327 SHEET 3 AA1 6 LEU A 339 PHE A 342 -1 N PHE A 341 O VAL A 390 SHEET 4 AA1 6 HIS A 354 GLY A 360 -1 O GLY A 356 N VAL A 340 SHEET 5 AA1 6 ASP A 363 SER A 368 -1 O ASP A 363 N ILE A 359 SHEET 6 AA1 6 LYS A 374 ASN A 379 -1 O SER A 378 N MET A 364 SHEET 1 AA2 6 THR B 327 VAL B 329 0 SHEET 2 AA2 6 TYR B 389 ARG B 394 -1 O ARG B 394 N THR B 327 SHEET 3 AA2 6 LEU B 339 PHE B 342 -1 N PHE B 341 O ASN B 391 SHEET 4 AA2 6 HIS B 354 GLY B 360 -1 O GLY B 356 N VAL B 340 SHEET 5 AA2 6 ASP B 363 SER B 368 -1 O ASP B 363 N ILE B 359 SHEET 6 AA2 6 LYS B 374 ASN B 379 -1 O SER B 378 N MET B 364 SHEET 1 AA3 6 THR C 327 TYR C 328 0 SHEET 2 AA3 6 TYR C 389 ARG C 394 -1 O ARG C 394 N THR C 327 SHEET 3 AA3 6 LEU C 339 PHE C 342 -1 N LEU C 339 O ARG C 393 SHEET 4 AA3 6 HIS C 354 GLY C 360 -1 O GLY C 356 N VAL C 340 SHEET 5 AA3 6 ASP C 363 SER C 368 -1 O ASP C 363 N ILE C 359 SHEET 6 AA3 6 LYS C 374 ASN C 379 -1 O SER C 378 N MET C 364 SHEET 1 AA4 6 THR D 327 VAL D 329 0 SHEET 2 AA4 6 TYR D 389 ARG D 394 -1 O ARG D 394 N THR D 327 SHEET 3 AA4 6 LEU D 339 PHE D 342 -1 N PHE D 341 O VAL D 390 SHEET 4 AA4 6 HIS D 354 GLY D 360 -1 O GLY D 356 N VAL D 340 SHEET 5 AA4 6 ASP D 363 SER D 368 -1 O ASP D 363 N ILE D 359 SHEET 6 AA4 6 LYS D 374 ASN D 379 -1 O SER D 378 N MET D 364 CISPEP 1 GLY A 293 PRO A 294 0 5.64 CISPEP 2 GLY B 293 PRO B 294 0 5.43 CISPEP 3 GLY C 293 PRO C 294 0 6.33 CISPEP 4 GLY D 293 PRO D 294 0 3.46 SITE 1 AC1 15 TYR A 287 TRP A 289 ASP A 298 CYS A 299 SITE 2 AC1 15 SER A 300 ARG A 317 VAL A 318 SER A 319 SITE 3 AC1 15 ARG A 320 SER A 353 HOH A 602 HOH A 613 SITE 4 AC1 15 HOH A 633 HOH A 634 HOH A 640 SITE 1 AC2 11 TYR B 287 TRP B 289 ASP B 298 CYS B 299 SITE 2 AC2 11 SER B 300 ARG B 317 VAL B 318 SER B 319 SITE 3 AC2 11 SER B 353 HOH B 612 HOH B 635 SITE 1 AC3 11 TYR C 287 TRP C 289 ASP C 298 CYS C 299 SITE 2 AC3 11 SER C 300 ARG C 317 VAL C 318 SER C 319 SITE 3 AC3 11 SER C 353 HOH C 602 HOH C 646 SITE 1 AC4 10 TYR D 287 TRP D 289 ASP D 298 CYS D 299 SITE 2 AC4 10 SER D 300 ARG D 317 VAL D 318 SER D 319 SITE 3 AC4 10 SER D 353 HOH D 605 CRYST1 50.440 55.210 57.110 104.86 112.64 90.06 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019826 0.000021 0.008614 0.00000 SCALE2 0.000000 0.018113 0.005247 0.00000 SCALE3 0.000000 0.000000 0.019752 0.00000