HEADER HYDROLASE INHIBITOR 07-JUL-20 7CI1 TITLE CRYSTAL STRUCTURE OF ACRVA2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACRVA2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MORAXELLA BOVOCULI; SOURCE 3 ORGANISM_TAXID: 386891; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CRISPR-CAS, ACRVA2, CPF1, CAS12A, MBCPF1, MBCAS12A, MBCPRF1, ANTI- KEYWDS 2 CRISPR, ACR, HYDROLASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR P.CHEN,Z.CHENG,Y.WANG REVDAT 6 27-MAR-24 7CI1 1 REMARK REVDAT 5 28-APR-21 7CI1 1 JRNL REVDAT 4 13-JAN-21 7CI1 1 REMARK REVDAT 3 30-DEC-20 7CI1 1 HEADER KEYWDS REVDAT 2 28-OCT-20 7CI1 1 JRNL REVDAT 1 14-OCT-20 7CI1 0 JRNL AUTH P.CHEN,W.SUN,Z.CHENG,J.YANG,M.WANG,J.WANG,H.CHEN,L.LIU, JRNL AUTH 2 Y.WANG JRNL TITL STRUCTURAL STUDY ON ANTI-CRISPR PROTEIN ACRVA2 JRNL REF PROG.BIOCHEM.BIOPHYS. 2021 JRNL REFN ISSN 1000-3282 JRNL DOI 10.16476/J.PIBB.2020.0223 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.440 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.3 REMARK 3 NUMBER OF REFLECTIONS : 40305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9700 - 5.5500 0.99 3174 172 0.2120 0.2625 REMARK 3 2 5.5500 - 4.4100 1.00 3161 176 0.1929 0.2224 REMARK 3 3 4.4100 - 3.8500 1.00 3143 171 0.1947 0.1856 REMARK 3 4 3.8500 - 3.5000 1.00 3192 156 0.2127 0.2231 REMARK 3 5 3.5000 - 3.2500 1.00 3197 138 0.2299 0.2498 REMARK 3 6 3.2500 - 3.0600 1.00 3169 184 0.2422 0.3050 REMARK 3 7 3.0600 - 2.9000 1.00 3165 140 0.2606 0.2753 REMARK 3 8 2.9000 - 2.7800 1.00 3166 192 0.2550 0.2801 REMARK 3 9 2.7800 - 2.6700 1.00 3179 160 0.2746 0.3076 REMARK 3 10 2.6700 - 2.5800 0.95 2976 178 0.2780 0.2680 REMARK 3 11 2.5800 - 2.5000 0.76 2399 113 0.2813 0.2679 REMARK 3 12 2.5000 - 2.4300 0.58 1837 94 0.2823 0.3106 REMARK 3 13 2.4300 - 2.3600 0.46 1465 67 0.2610 0.2886 REMARK 3 14 2.3600 - 2.3000 0.35 1080 61 0.2574 0.3093 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.291 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.758 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.65 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 4862 REMARK 3 ANGLE : 1.690 6590 REMARK 3 CHIRALITY : 0.240 714 REMARK 3 PLANARITY : 0.008 838 REMARK 3 DIHEDRAL : 21.242 1725 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 0 through 2 or REMARK 3 resid 4 through 60 or (resid 61 through REMARK 3 62 and (name N or name CA or name C or REMARK 3 name O or name CB )) or resid 63 through REMARK 3 187 or resid 189 through 232 or (resid REMARK 3 233 and (name N or name CA or name C or REMARK 3 name O or name CB )) or resid 234 through REMARK 3 239 or (resid 240 and (name N or name CA REMARK 3 or name C or name O or name CB )) or REMARK 3 resid 242 through 264 or resid 266 REMARK 3 through 270 or resid 286 through 316)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 0 through 2 or REMARK 3 resid 4 through 147 or (resid 148 through REMARK 3 149 and (name N or name CA or name C or REMARK 3 name O or name CB )) or resid 150 through REMARK 3 187 or resid 189 through 235 or (resid REMARK 3 236 through 238 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 239 through 240 or resid 242 through 264 REMARK 3 or resid 266 through 270 or resid 286 REMARK 3 through 316)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CI1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1300017637. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46743 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.86200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.085 M HEPES PH7.5, 1.7% PEG400, 1.7 REMARK 280 M (NH4)2SO4, 15% GLYCEROL, EVAPORATION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 176.11400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.05700 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 132.08550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.02850 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 220.14250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 190 REMARK 465 SER A 191 REMARK 465 LEU A 192 REMARK 465 PHE A 193 REMARK 465 ASP A 194 REMARK 465 ASP A 195 REMARK 465 SER A 237 REMARK 465 GLY A 273 REMARK 465 GLU A 274 REMARK 465 GLN A 275 REMARK 465 LYS A 276 REMARK 465 ARG A 277 REMARK 465 ASN A 278 REMARK 465 ARG A 279 REMARK 465 PRO A 280 REMARK 465 HIS A 281 REMARK 465 THR A 282 REMARK 465 LYS A 283 REMARK 465 ARG A 284 REMARK 465 GLY A 298 REMARK 465 THR A 299 REMARK 465 SER A 317 REMARK 465 GLY A 318 REMARK 465 ARG A 319 REMARK 465 VAL A 320 REMARK 465 SER A 321 REMARK 465 SER A 322 REMARK 465 ALA B 190 REMARK 465 SER B 191 REMARK 465 LEU B 192 REMARK 465 PHE B 193 REMARK 465 ASP B 194 REMARK 465 ASP B 195 REMARK 465 SER B 237 REMARK 465 ASP B 272 REMARK 465 GLY B 273 REMARK 465 GLU B 274 REMARK 465 GLN B 275 REMARK 465 LYS B 276 REMARK 465 ARG B 277 REMARK 465 ASN B 278 REMARK 465 ARG B 279 REMARK 465 PRO B 280 REMARK 465 HIS B 281 REMARK 465 THR B 282 REMARK 465 LYS B 283 REMARK 465 ARG B 284 REMARK 465 GLY B 298 REMARK 465 THR B 299 REMARK 465 SER B 317 REMARK 465 GLY B 318 REMARK 465 ARG B 319 REMARK 465 VAL B 320 REMARK 465 SER B 321 REMARK 465 SER B 322 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 58 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 132 CG1 CG2 REMARK 470 MET A 148 CG SD CE REMARK 470 ASN A 149 CG OD1 ND2 REMARK 470 TYR A 188 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR A 197 OG1 CG2 REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 HIS A 236 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 238 CG1 CG2 CD1 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 ASP A 272 CG OD1 OD2 REMARK 470 GLN A 297 CG CD OE1 NE2 REMARK 470 GLN A 301 CG CD OE1 NE2 REMARK 470 LYS A 303 CG CD CE NZ REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 ASN A 316 CG OD1 ND2 REMARK 470 ARG B 58 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 61 CG CD CE NZ REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 VAL B 132 CG1 CG2 REMARK 470 ASN B 149 CG OD1 ND2 REMARK 470 TYR B 188 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR B 197 OG1 CG2 REMARK 470 ARG B 233 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 235 CG CD CE NZ REMARK 470 LYS B 240 CG CD CE NZ REMARK 470 ILE B 271 CG1 CG2 CD1 REMARK 470 PRO B 285 CG CD REMARK 470 GLN B 297 CG CD OE1 NE2 REMARK 470 GLN B 301 CG CD OE1 NE2 REMARK 470 LYS B 303 CG CD CE NZ REMARK 470 GLU B 304 CG CD OE1 OE2 REMARK 470 ASN B 316 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N PRO B 285 O VAL B 315 2.17 REMARK 500 OE1 GLU B 90 O HOH B 501 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 72 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 72 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 LYS A 94 CB - CG - CD ANGL. DEV. = -20.6 DEGREES REMARK 500 LEU A 99 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 ASP A 129 N - CA - C ANGL. DEV. = -23.7 DEGREES REMARK 500 ARG A 265 CA - C - O ANGL. DEV. = 12.6 DEGREES REMARK 500 ARG A 265 CA - C - O ANGL. DEV. = 13.0 DEGREES REMARK 500 ARG A 265 CA - C - N ANGL. DEV. = -13.4 DEGREES REMARK 500 LEU B 31 CB - CG - CD2 ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG B 72 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 72 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 ASP B 129 N - CA - C ANGL. DEV. = -25.2 DEGREES REMARK 500 TYR B 188 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 VAL B 246 CG1 - CB - CG2 ANGL. DEV. = 10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 186 -70.03 -87.86 REMARK 500 TYR B 188 -69.98 -120.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SPD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SPD A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SPD B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 403 DBREF 7CI1 A 0 322 PDB 7CI1 7CI1 0 322 DBREF 7CI1 B 0 322 PDB 7CI1 7CI1 0 322 SEQRES 1 A 323 SER MET HIS HIS THR ILE ALA ARG MET ASN ALA PHE ASN SEQRES 2 A 323 LYS ALA PHE ALA ASN ALA LYS ASP CYS TYR LYS LYS MET SEQRES 3 A 323 GLN ALA TRP HIS LEU LEU ASN LYS PRO LYS HIS ALA PHE SEQRES 4 A 323 PHE PRO MET GLN ASN THR PRO ALA LEU ASP ASN GLY LEU SEQRES 5 A 323 ALA ALA LEU TYR GLU LEU ARG GLY GLY LYS GLU ASP ALA SEQRES 6 A 323 HIS ILE LEU SER ILE LEU SER ARG LEU TYR LEU TYR GLY SEQRES 7 A 323 ALA TRP ARG ASN THR LEU GLY ILE TYR GLN LEU ASP GLU SEQRES 8 A 323 GLU ILE ILE LYS ASP CYS LYS GLU LEU PRO ASP ASP THR SEQRES 9 A 323 PRO THR SER ILE PHE LEU ASN LEU PRO ASP TRP CYS VAL SEQRES 10 A 323 TYR VAL ASP ILE SER SER ALA GLN ILE ALA THR PHE ASP SEQRES 11 A 323 ASP GLY VAL ALA LYS HIS ILE LYS GLY PHE TRP ALA ILE SEQRES 12 A 323 TYR ASP ILE VAL GLU MET ASN GLY ILE ASN HIS ASP VAL SEQRES 13 A 323 LEU ASP PHE VAL VAL ASP THR ASP THR ASP ASP ASN VAL SEQRES 14 A 323 TYR VAL PRO GLN PRO PHE ILE LEU SER SER GLY GLN SER SEQRES 15 A 323 VAL ALA GLU VAL LEU ASP TYR GLY ALA SER LEU PHE ASP SEQRES 16 A 323 ASP ASP THR SER ASN THR LEU ILE LYS GLY LEU LEU PRO SEQRES 17 A 323 TYR LEU LEU TRP LEU CYS VAL ALA GLU PRO ASP ILE THR SEQRES 18 A 323 TYR LYS GLY LEU PRO VAL SER ARG GLU GLU LEU THR ARG SEQRES 19 A 323 PRO LYS HIS SER ILE ASN LYS LYS THR GLY ALA PHE VAL SEQRES 20 A 323 THR PRO SER GLU PRO PHE ILE TYR GLN ILE GLY GLU ARG SEQRES 21 A 323 LEU GLY SER GLU VAL ARG ARG TYR GLN SER ILE ILE ASP SEQRES 22 A 323 GLY GLU GLN LYS ARG ASN ARG PRO HIS THR LYS ARG PRO SEQRES 23 A 323 HIS ILE ARG ARG GLY HIS TRP HIS GLY TYR TRP GLN GLY SEQRES 24 A 323 THR GLY GLN ALA LYS GLU PHE ARG VAL ARG TRP GLN PRO SEQRES 25 A 323 ALA VAL PHE VAL ASN SER GLY ARG VAL SER SER SEQRES 1 B 323 SER MET HIS HIS THR ILE ALA ARG MET ASN ALA PHE ASN SEQRES 2 B 323 LYS ALA PHE ALA ASN ALA LYS ASP CYS TYR LYS LYS MET SEQRES 3 B 323 GLN ALA TRP HIS LEU LEU ASN LYS PRO LYS HIS ALA PHE SEQRES 4 B 323 PHE PRO MET GLN ASN THR PRO ALA LEU ASP ASN GLY LEU SEQRES 5 B 323 ALA ALA LEU TYR GLU LEU ARG GLY GLY LYS GLU ASP ALA SEQRES 6 B 323 HIS ILE LEU SER ILE LEU SER ARG LEU TYR LEU TYR GLY SEQRES 7 B 323 ALA TRP ARG ASN THR LEU GLY ILE TYR GLN LEU ASP GLU SEQRES 8 B 323 GLU ILE ILE LYS ASP CYS LYS GLU LEU PRO ASP ASP THR SEQRES 9 B 323 PRO THR SER ILE PHE LEU ASN LEU PRO ASP TRP CYS VAL SEQRES 10 B 323 TYR VAL ASP ILE SER SER ALA GLN ILE ALA THR PHE ASP SEQRES 11 B 323 ASP GLY VAL ALA LYS HIS ILE LYS GLY PHE TRP ALA ILE SEQRES 12 B 323 TYR ASP ILE VAL GLU MET ASN GLY ILE ASN HIS ASP VAL SEQRES 13 B 323 LEU ASP PHE VAL VAL ASP THR ASP THR ASP ASP ASN VAL SEQRES 14 B 323 TYR VAL PRO GLN PRO PHE ILE LEU SER SER GLY GLN SER SEQRES 15 B 323 VAL ALA GLU VAL LEU ASP TYR GLY ALA SER LEU PHE ASP SEQRES 16 B 323 ASP ASP THR SER ASN THR LEU ILE LYS GLY LEU LEU PRO SEQRES 17 B 323 TYR LEU LEU TRP LEU CYS VAL ALA GLU PRO ASP ILE THR SEQRES 18 B 323 TYR LYS GLY LEU PRO VAL SER ARG GLU GLU LEU THR ARG SEQRES 19 B 323 PRO LYS HIS SER ILE ASN LYS LYS THR GLY ALA PHE VAL SEQRES 20 B 323 THR PRO SER GLU PRO PHE ILE TYR GLN ILE GLY GLU ARG SEQRES 21 B 323 LEU GLY SER GLU VAL ARG ARG TYR GLN SER ILE ILE ASP SEQRES 22 B 323 GLY GLU GLN LYS ARG ASN ARG PRO HIS THR LYS ARG PRO SEQRES 23 B 323 HIS ILE ARG ARG GLY HIS TRP HIS GLY TYR TRP GLN GLY SEQRES 24 B 323 THR GLY GLN ALA LYS GLU PHE ARG VAL ARG TRP GLN PRO SEQRES 25 B 323 ALA VAL PHE VAL ASN SER GLY ARG VAL SER SER HET SPD A 401 10 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET SPD A 409 10 HET SPD B 401 10 HET EDO B 402 4 HET EDO B 403 4 HETNAM SPD SPERMIDINE HETNAM EDO 1,2-ETHANEDIOL HETSYN SPD N-(2-AMINO-PROPYL)-1,4-DIAMINOBUTANE; PA(34) HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SPD 3(C7 H19 N3) FORMUL 4 EDO 9(C2 H6 O2) FORMUL 15 HOH *135(H2 O) HELIX 1 AA1 HIS A 2 PHE A 15 1 14 HELIX 2 AA2 ASN A 17 LYS A 33 1 17 HELIX 3 AA3 PRO A 40 GLN A 42 5 3 HELIX 4 AA4 ASN A 43 ASP A 48 1 6 HELIX 5 AA5 ASP A 48 LEU A 57 1 10 HELIX 6 AA6 ASP A 63 ARG A 80 1 18 HELIX 7 AA7 ASP A 89 LYS A 94 1 6 HELIX 8 AA8 THR A 105 ASN A 110 5 6 HELIX 9 AA9 SER A 121 GLN A 124 5 4 HELIX 10 AB1 SER A 181 ASP A 187 1 7 HELIX 11 AB2 THR A 197 LEU A 210 1 14 HELIX 12 AB3 TRP A 211 CYS A 213 5 3 HELIX 13 AB4 SER A 227 ARG A 233 1 7 HELIX 14 AB5 GLY A 257 ASP A 272 1 16 HELIX 15 AB6 HIS B 2 PHE B 15 1 14 HELIX 16 AB7 ASN B 17 LYS B 33 1 17 HELIX 17 AB8 PRO B 40 GLN B 42 5 3 HELIX 18 AB9 ASN B 43 ASP B 48 1 6 HELIX 19 AC1 ASP B 48 LEU B 57 1 10 HELIX 20 AC2 GLY B 59 GLU B 62 5 4 HELIX 21 AC3 ASP B 63 ARG B 80 1 18 HELIX 22 AC4 ASP B 89 LYS B 94 1 6 HELIX 23 AC5 PRO B 104 ASN B 110 5 7 HELIX 24 AC6 SER B 121 GLN B 124 5 4 HELIX 25 AC7 SER B 181 TYR B 188 1 8 HELIX 26 AC8 THR B 197 LEU B 210 1 14 HELIX 27 AC9 TRP B 211 CYS B 213 5 3 HELIX 28 AD1 SER B 227 ARG B 233 1 7 HELIX 29 AD2 GLY B 257 ILE B 271 1 15 SHEET 1 AA1 8 GLN A 172 ILE A 175 0 SHEET 2 AA1 8 ILE A 151 ASP A 161 -1 N LEU A 156 O PHE A 174 SHEET 3 AA1 8 GLY A 138 MET A 148 -1 N ILE A 142 O ASP A 157 SHEET 4 AA1 8 CYS A 115 ASP A 119 -1 N VAL A 118 O PHE A 139 SHEET 5 AA1 8 GLY A 84 LEU A 88 1 N TYR A 86 O ASP A 119 SHEET 6 AA1 8 PHE A 252 ILE A 256 1 O TYR A 254 N ILE A 85 SHEET 7 AA1 8 ILE A 219 TYR A 221 -1 N THR A 220 O GLN A 255 SHEET 8 AA1 8 LEU A 224 PRO A 225 -1 O LEU A 224 N TYR A 221 SHEET 1 AA2 2 ALA A 126 ASP A 129 0 SHEET 2 AA2 2 VAL A 132 HIS A 135 -1 O VAL A 132 N ASP A 129 SHEET 1 AA3 2 HIS A 286 ARG A 288 0 SHEET 2 AA3 2 VAL A 313 VAL A 315 -1 O VAL A 315 N HIS A 286 SHEET 1 AA4 2 HIS A 291 TRP A 296 0 SHEET 2 AA4 2 PHE A 305 GLN A 310 -1 O GLN A 310 N HIS A 291 SHEET 1 AA5 8 GLN B 172 ILE B 175 0 SHEET 2 AA5 8 ILE B 151 ASP B 161 -1 N LEU B 156 O PHE B 174 SHEET 3 AA5 8 GLY B 138 MET B 148 -1 N ILE B 142 O ASP B 157 SHEET 4 AA5 8 CYS B 115 ASP B 119 -1 N VAL B 118 O PHE B 139 SHEET 5 AA5 8 GLY B 84 LEU B 88 1 N TYR B 86 O ASP B 119 SHEET 6 AA5 8 PHE B 252 ILE B 256 1 O TYR B 254 N ILE B 85 SHEET 7 AA5 8 ILE B 219 TYR B 221 -1 N THR B 220 O GLN B 255 SHEET 8 AA5 8 LEU B 224 PRO B 225 -1 O LEU B 224 N TYR B 221 SHEET 1 AA6 2 ALA B 126 ASP B 129 0 SHEET 2 AA6 2 VAL B 132 HIS B 135 -1 O LYS B 134 N THR B 127 SHEET 1 AA7 2 HIS B 286 ARG B 288 0 SHEET 2 AA7 2 VAL B 313 VAL B 315 -1 O VAL B 315 N HIS B 286 SHEET 1 AA8 2 HIS B 291 TRP B 296 0 SHEET 2 AA8 2 PHE B 305 GLN B 310 -1 O GLN B 310 N HIS B 291 SITE 1 AC1 5 TYR A 221 TYR A 254 HOH A 501 HOH A 505 SITE 2 AC1 5 HOH A 519 SITE 1 AC2 1 HOH A 519 SITE 1 AC3 5 MET A 1 ILE A 5 MET A 8 ASN A 9 SITE 2 AC3 5 SER A 249 SITE 1 AC4 2 ASP A 165 ASP A 166 SITE 1 AC5 2 THR A 82 PHE A 252 SITE 1 AC6 2 GLU A 230 HOH A 503 SITE 1 AC7 5 ASN A 49 ASP A 218 HOH A 506 HOH A 512 SITE 2 AC7 5 HOH A 556 SITE 1 AC8 6 ASN B 49 ASP B 218 PRO B 311 HOH B 503 SITE 2 AC8 6 HOH B 507 HOH B 519 SITE 1 AC9 2 ASP B 144 ASP B 157 SITE 1 AD1 3 ILE B 5 ASN B 9 SER B 249 CRYST1 84.287 84.287 264.171 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011864 0.006850 0.000000 0.00000 SCALE2 0.000000 0.013700 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003785 0.00000