HEADER HYDROLASE 07-JUL-20 7CI2 TITLE CRYSTAL STRUCTURE OF ACRVA2 IN COMPLEX WITH PARTIAL MBCPF1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACRVA2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MBCPF1; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MORAXELLA BOVOCULI; SOURCE 3 ORGANISM_TAXID: 386891; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: MORAXELLA BOVOCULI; SOURCE 8 ORGANISM_TAXID: 386891; SOURCE 9 GENE: AAX07_00205; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTI-CRISPR, CRISPR-CAS, ACRVA2, CPF1, CAS12A, MBCPF1, MBCAS12A, ACR, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.CHEN,Z.CHENG,Y.WANG REVDAT 4 29-NOV-23 7CI2 1 REMARK REVDAT 3 28-APR-21 7CI2 1 JRNL REVDAT 2 28-OCT-20 7CI2 1 JRNL REVDAT 1 14-OCT-20 7CI2 0 JRNL AUTH P.CHEN,W.SUN,Z.CHENG,J.YANG,M.WANG,J.WANG,H.CHEN,L.LIU, JRNL AUTH 2 Y.WANG JRNL TITL STRUCTURAL STUDY ON ANTI-CRISPR PROTEIN ACRVA2 JRNL REF PROG.BIOCHEM.BIOPHYS. 2021 JRNL REFN ISSN 1000-3282 JRNL DOI 10.16476/J.PIBB.2020.0223 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.050 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 28919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4100 - 6.0300 0.99 2938 158 0.2110 0.2304 REMARK 3 2 6.0300 - 4.7900 1.00 2997 143 0.2095 0.2169 REMARK 3 3 4.7900 - 4.1800 1.00 2965 168 0.1973 0.2314 REMARK 3 4 4.1800 - 3.8000 1.00 2961 150 0.2189 0.2365 REMARK 3 5 3.8000 - 3.5300 1.00 3020 114 0.2585 0.2899 REMARK 3 6 3.5300 - 3.3200 1.00 2938 184 0.2825 0.3172 REMARK 3 7 3.3200 - 3.1500 1.00 2977 128 0.2829 0.2870 REMARK 3 8 3.1500 - 3.0200 1.00 2928 195 0.3187 0.3248 REMARK 3 9 3.0200 - 2.9000 0.92 2729 145 0.3492 0.3598 REMARK 3 10 2.9000 - 2.8000 0.34 1032 49 0.3962 0.4064 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.437 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.028 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 5419 REMARK 3 ANGLE : 1.673 7381 REMARK 3 CHIRALITY : 0.128 800 REMARK 3 PLANARITY : 0.011 950 REMARK 3 DIHEDRAL : 10.725 724 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 0 through 79 or REMARK 3 resid 81 through 93 or resid 95 through REMARK 3 129 or (resid 130 and (name N or name CA REMARK 3 or name C or name O or name CB )) or REMARK 3 resid 131 through 215 or (resid 216 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 217 through 316)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 0 through 79 or REMARK 3 resid 81 through 93 or resid 95 through REMARK 3 316)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "C" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "D" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7CI2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1300017666. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97852 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31347 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.76300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7CI1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.035 M SODIUM CACODYLATE PH 6.5, 12.6 REMARK 280 MM MGCL2, 1.58 MM SPERMINE, 6.3% ISOPROPANOL, 15 MM HEPES PH 6.8, REMARK 280 0.75% PEG5K MME,0.2 M NDSB-211, EVAPORATION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.89300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 91.78600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 281 REMARK 465 THR A 282 REMARK 465 LYS A 283 REMARK 465 ARG A 284 REMARK 465 SER A 317 REMARK 465 GLY A 318 REMARK 465 ARG A 319 REMARK 465 VAL A 320 REMARK 465 SER A 321 REMARK 465 SER A 322 REMARK 465 HIS B 281 REMARK 465 THR B 282 REMARK 465 LYS B 283 REMARK 465 ARG B 284 REMARK 465 SER B 317 REMARK 465 GLY B 318 REMARK 465 ARG B 319 REMARK 465 VAL B 320 REMARK 465 SER B 321 REMARK 465 SER B 322 REMARK 465 ASN C 612 REMARK 465 THR C 613 REMARK 465 GLY C 614 REMARK 465 LYS C 615 REMARK 465 SER C 616 REMARK 465 VAL C 617 REMARK 465 PHE C 637 REMARK 465 PHE C 638 REMARK 465 ALA C 639 REMARK 465 LYS C 640 REMARK 465 SER C 641 REMARK 465 ASN C 642 REMARK 465 LEU C 643 REMARK 465 ASP C 644 REMARK 465 ASN D 612 REMARK 465 THR D 613 REMARK 465 GLY D 614 REMARK 465 LYS D 615 REMARK 465 SER D 616 REMARK 465 VAL D 617 REMARK 465 PHE D 637 REMARK 465 PHE D 638 REMARK 465 ALA D 639 REMARK 465 LYS D 640 REMARK 465 SER D 641 REMARK 465 ASN D 642 REMARK 465 LEU D 643 REMARK 465 ASP D 644 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 ARG A 58 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 MET A 148 CG SD CE REMARK 470 GLN A 180 CG CD OE1 NE2 REMARK 470 LYS A 240 CG CD CE NZ REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 ASN A 278 CG OD1 ND2 REMARK 470 ARG A 279 CG CD NE CZ NH1 NH2 REMARK 470 THR A 299 OG1 CG2 REMARK 470 GLN A 301 CG CD OE1 NE2 REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 LYS B 35 CG CD CE NZ REMARK 470 ARG B 58 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 ASP B 130 CG OD1 OD2 REMARK 470 MET B 148 CG SD CE REMARK 470 GLN B 180 CG CD OE1 NE2 REMARK 470 GLU B 216 CG CD OE1 OE2 REMARK 470 LYS B 240 CG CD CE NZ REMARK 470 LYS B 276 CG CD CE NZ REMARK 470 ASN B 278 CG OD1 ND2 REMARK 470 ARG B 279 CG CD NE CZ NH1 NH2 REMARK 470 THR B 299 OG1 CG2 REMARK 470 GLN B 301 CG CD OE1 NE2 REMARK 470 GLU B 304 CG CD OE1 OE2 REMARK 470 TYR C 618 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 635 CG CD CE NZ REMARK 470 TYR D 618 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS D 635 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 89 NH2 ARG A 265 2.17 REMARK 500 O TYR A 295 N ARG A 306 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CA ALA B 190 ND2 ASN B 316 3554 1.69 REMARK 500 ND2 ASN B 32 O TYR C 618 3564 1.91 REMARK 500 CD1 LEU B 31 CB ILE C 622 3564 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 91 O - C - N ANGL. DEV. = 10.3 DEGREES REMARK 500 MET A 148 N - CA - C ANGL. DEV. = -20.9 DEGREES REMARK 500 LEU B 99 C - N - CA ANGL. DEV. = 15.2 DEGREES REMARK 500 ILE B 145 O - C - N ANGL. DEV. = -10.4 DEGREES REMARK 500 MET B 148 N - CA - C ANGL. DEV. = -21.3 DEGREES REMARK 500 PRO B 311 C - N - CA ANGL. DEV. = 12.9 DEGREES REMARK 500 PRO B 311 C - N - CD ANGL. DEV. = -14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 15 79.57 -110.93 REMARK 500 LYS A 33 64.57 39.58 REMARK 500 PHE A 39 121.76 -170.80 REMARK 500 ARG A 58 109.33 -59.62 REMARK 500 ASP A 166 34.99 -94.91 REMARK 500 ASP A 196 -48.79 61.45 REMARK 500 GLN A 301 -19.32 72.13 REMARK 500 PHE B 39 123.67 -170.23 REMARK 500 ARG B 58 105.96 -59.35 REMARK 500 GLU B 91 1.84 -63.94 REMARK 500 LYS B 97 -73.12 -89.25 REMARK 500 ASP B 196 -51.19 61.48 REMARK 500 MET C 621 -162.37 -160.42 REMARK 500 MET D 621 -112.87 -140.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLU B 184 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 7CI2 A 0 322 PDB 7CI2 7CI2 0 322 DBREF 7CI2 B 0 322 PDB 7CI2 7CI2 0 322 DBREF1 7CI2 C 612 644 UNP A0A0U2B2X7_9GAMM DBREF2 7CI2 C A0A0U2B2X7 612 644 DBREF1 7CI2 D 612 644 UNP A0A0U2B2X7_9GAMM DBREF2 7CI2 D A0A0U2B2X7 612 644 SEQRES 1 A 323 SER MET HIS HIS THR ILE ALA ARG MET ASN ALA PHE ASN SEQRES 2 A 323 LYS ALA PHE ALA ASN ALA LYS ASP CYS TYR LYS LYS MET SEQRES 3 A 323 GLN ALA TRP HIS LEU LEU ASN LYS PRO LYS HIS ALA PHE SEQRES 4 A 323 PHE PRO MET GLN ASN THR PRO ALA LEU ASP ASN GLY LEU SEQRES 5 A 323 ALA ALA LEU TYR GLU LEU ARG GLY GLY LYS GLU ASP ALA SEQRES 6 A 323 HIS ILE LEU SER ILE LEU SER ARG LEU TYR LEU TYR GLY SEQRES 7 A 323 ALA TRP ARG ASN THR LEU GLY ILE TYR GLN LEU ASP GLU SEQRES 8 A 323 GLU ILE ILE LYS ASP CYS LYS GLU LEU PRO ASP ASP THR SEQRES 9 A 323 PRO THR SER ILE PHE LEU ASN LEU PRO ASP TRP CYS VAL SEQRES 10 A 323 TYR VAL ASP ILE SER SER ALA GLN ILE ALA THR PHE ASP SEQRES 11 A 323 ASP GLY VAL ALA LYS HIS ILE LYS GLY PHE TRP ALA ILE SEQRES 12 A 323 TYR ASP ILE VAL GLU MET ASN GLY ILE ASN HIS ASP VAL SEQRES 13 A 323 LEU ASP PHE VAL VAL ASP THR ASP THR ASP ASP ASN VAL SEQRES 14 A 323 TYR VAL PRO GLN PRO PHE ILE LEU SER SER GLY GLN SER SEQRES 15 A 323 VAL ALA GLU VAL LEU ASP TYR GLY ALA SER LEU PHE ASP SEQRES 16 A 323 ASP ASP THR SER ASN THR LEU ILE LYS GLY LEU LEU PRO SEQRES 17 A 323 TYR LEU LEU TRP LEU CYS VAL ALA GLU PRO ASP ILE THR SEQRES 18 A 323 TYR LYS GLY LEU PRO VAL SER ARG GLU GLU LEU THR ARG SEQRES 19 A 323 PRO LYS HIS SER ILE ASN LYS LYS THR GLY ALA PHE VAL SEQRES 20 A 323 THR PRO SER GLU PRO PHE ILE TYR GLN ILE GLY GLU ARG SEQRES 21 A 323 LEU GLY SER GLU VAL ARG ARG TYR GLN SER ILE ILE ASP SEQRES 22 A 323 GLY GLU GLN LYS ARG ASN ARG PRO HIS THR LYS ARG PRO SEQRES 23 A 323 HIS ILE ARG ARG GLY HIS TRP HIS GLY TYR TRP GLN GLY SEQRES 24 A 323 THR GLY GLN ALA LYS GLU PHE ARG VAL ARG TRP GLN PRO SEQRES 25 A 323 ALA VAL PHE VAL ASN SER GLY ARG VAL SER SER SEQRES 1 B 323 SER MET HIS HIS THR ILE ALA ARG MET ASN ALA PHE ASN SEQRES 2 B 323 LYS ALA PHE ALA ASN ALA LYS ASP CYS TYR LYS LYS MET SEQRES 3 B 323 GLN ALA TRP HIS LEU LEU ASN LYS PRO LYS HIS ALA PHE SEQRES 4 B 323 PHE PRO MET GLN ASN THR PRO ALA LEU ASP ASN GLY LEU SEQRES 5 B 323 ALA ALA LEU TYR GLU LEU ARG GLY GLY LYS GLU ASP ALA SEQRES 6 B 323 HIS ILE LEU SER ILE LEU SER ARG LEU TYR LEU TYR GLY SEQRES 7 B 323 ALA TRP ARG ASN THR LEU GLY ILE TYR GLN LEU ASP GLU SEQRES 8 B 323 GLU ILE ILE LYS ASP CYS LYS GLU LEU PRO ASP ASP THR SEQRES 9 B 323 PRO THR SER ILE PHE LEU ASN LEU PRO ASP TRP CYS VAL SEQRES 10 B 323 TYR VAL ASP ILE SER SER ALA GLN ILE ALA THR PHE ASP SEQRES 11 B 323 ASP GLY VAL ALA LYS HIS ILE LYS GLY PHE TRP ALA ILE SEQRES 12 B 323 TYR ASP ILE VAL GLU MET ASN GLY ILE ASN HIS ASP VAL SEQRES 13 B 323 LEU ASP PHE VAL VAL ASP THR ASP THR ASP ASP ASN VAL SEQRES 14 B 323 TYR VAL PRO GLN PRO PHE ILE LEU SER SER GLY GLN SER SEQRES 15 B 323 VAL ALA GLU VAL LEU ASP TYR GLY ALA SER LEU PHE ASP SEQRES 16 B 323 ASP ASP THR SER ASN THR LEU ILE LYS GLY LEU LEU PRO SEQRES 17 B 323 TYR LEU LEU TRP LEU CYS VAL ALA GLU PRO ASP ILE THR SEQRES 18 B 323 TYR LYS GLY LEU PRO VAL SER ARG GLU GLU LEU THR ARG SEQRES 19 B 323 PRO LYS HIS SER ILE ASN LYS LYS THR GLY ALA PHE VAL SEQRES 20 B 323 THR PRO SER GLU PRO PHE ILE TYR GLN ILE GLY GLU ARG SEQRES 21 B 323 LEU GLY SER GLU VAL ARG ARG TYR GLN SER ILE ILE ASP SEQRES 22 B 323 GLY GLU GLN LYS ARG ASN ARG PRO HIS THR LYS ARG PRO SEQRES 23 B 323 HIS ILE ARG ARG GLY HIS TRP HIS GLY TYR TRP GLN GLY SEQRES 24 B 323 THR GLY GLN ALA LYS GLU PHE ARG VAL ARG TRP GLN PRO SEQRES 25 B 323 ALA VAL PHE VAL ASN SER GLY ARG VAL SER SER SEQRES 1 C 33 ASN THR GLY LYS SER VAL TYR GLN LYS MET ILE TYR LYS SEQRES 2 C 33 LEU LEU PRO GLY PRO ASN LYS MET LEU PRO LYS VAL PHE SEQRES 3 C 33 PHE ALA LYS SER ASN LEU ASP SEQRES 1 D 33 ASN THR GLY LYS SER VAL TYR GLN LYS MET ILE TYR LYS SEQRES 2 D 33 LEU LEU PRO GLY PRO ASN LYS MET LEU PRO LYS VAL PHE SEQRES 3 D 33 PHE ALA LYS SER ASN LEU ASP FORMUL 5 HOH *67(H2 O) HELIX 1 AA1 HIS A 2 PHE A 15 1 14 HELIX 2 AA2 ASN A 17 LYS A 33 1 17 HELIX 3 AA3 ASN A 43 ASP A 48 1 6 HELIX 4 AA4 ASP A 48 GLU A 56 1 9 HELIX 5 AA5 ASP A 63 ARG A 80 1 18 HELIX 6 AA6 ASP A 89 LYS A 94 1 6 HELIX 7 AA7 PRO A 104 ASN A 110 5 7 HELIX 8 AA8 SER A 121 ALA A 123 5 3 HELIX 9 AA9 SER A 181 ASP A 187 1 7 HELIX 10 AB1 ASP A 196 LEU A 210 1 15 HELIX 11 AB2 TRP A 211 VAL A 214 5 4 HELIX 12 AB3 SER A 227 THR A 232 1 6 HELIX 13 AB4 GLY A 257 ASN A 278 1 22 HELIX 14 AB5 HIS B 2 PHE B 15 1 14 HELIX 15 AB6 ASN B 17 LYS B 33 1 17 HELIX 16 AB7 PRO B 40 LEU B 47 5 8 HELIX 17 AB8 ASP B 48 GLU B 56 1 9 HELIX 18 AB9 ASP B 63 ARG B 80 1 18 HELIX 19 AC1 ASP B 89 LYS B 94 1 6 HELIX 20 AC2 THR B 105 ASN B 110 5 6 HELIX 21 AC3 SER B 121 ALA B 123 5 3 HELIX 22 AC4 SER B 181 ASP B 187 1 7 HELIX 23 AC5 ASP B 196 LEU B 210 1 15 HELIX 24 AC6 TRP B 211 VAL B 214 5 4 HELIX 25 AC7 SER B 227 THR B 232 1 6 HELIX 26 AC8 GLY B 257 ASN B 278 1 22 SHEET 1 AA1 8 GLN A 172 ILE A 175 0 SHEET 2 AA1 8 ILE A 151 ASP A 161 -1 N PHE A 158 O GLN A 172 SHEET 3 AA1 8 GLY A 138 MET A 148 -1 N ILE A 142 O ASP A 157 SHEET 4 AA1 8 CYS A 115 ASP A 119 -1 N VAL A 118 O PHE A 139 SHEET 5 AA1 8 GLY A 84 LEU A 88 1 N TYR A 86 O ASP A 119 SHEET 6 AA1 8 PHE A 252 ILE A 256 1 O TYR A 254 N ILE A 85 SHEET 7 AA1 8 ILE A 219 TYR A 221 -1 N THR A 220 O GLN A 255 SHEET 8 AA1 8 LEU A 224 VAL A 226 -1 O VAL A 226 N ILE A 219 SHEET 1 AA2 3 VAL A 132 HIS A 135 0 SHEET 2 AA2 3 ILE A 125 ASP A 129 -1 N ASP A 129 O VAL A 132 SHEET 3 AA2 3 LYS C 624 PRO C 627 1 O LEU C 626 N PHE A 128 SHEET 1 AA3 2 SER A 237 ILE A 238 0 SHEET 2 AA3 2 PHE A 245 VAL A 246 -1 O VAL A 246 N SER A 237 SHEET 1 AA4 2 HIS A 286 ARG A 288 0 SHEET 2 AA4 2 VAL A 313 VAL A 315 -1 O VAL A 315 N HIS A 286 SHEET 1 AA5 2 HIS A 291 TYR A 295 0 SHEET 2 AA5 2 ARG A 306 GLN A 310 -1 O ARG A 306 N TYR A 295 SHEET 1 AA6 8 GLN B 172 ILE B 175 0 SHEET 2 AA6 8 ILE B 151 ASP B 161 -1 N LEU B 156 O PHE B 174 SHEET 3 AA6 8 GLY B 138 MET B 148 -1 N ILE B 142 O ASP B 157 SHEET 4 AA6 8 CYS B 115 ASP B 119 -1 N VAL B 118 O PHE B 139 SHEET 5 AA6 8 GLY B 84 LEU B 88 1 N TYR B 86 O TYR B 117 SHEET 6 AA6 8 PHE B 252 ILE B 256 1 O TYR B 254 N ILE B 85 SHEET 7 AA6 8 ILE B 219 TYR B 221 -1 N THR B 220 O GLN B 255 SHEET 8 AA6 8 LEU B 224 PRO B 225 -1 O LEU B 224 N TYR B 221 SHEET 1 AA7 3 VAL B 132 HIS B 135 0 SHEET 2 AA7 3 ILE B 125 ASP B 129 -1 N THR B 127 O LYS B 134 SHEET 3 AA7 3 LYS D 624 PRO D 627 1 O LEU D 626 N ALA B 126 SHEET 1 AA8 2 SER B 237 ILE B 238 0 SHEET 2 AA8 2 PHE B 245 VAL B 246 -1 O VAL B 246 N SER B 237 SHEET 1 AA9 2 HIS B 286 ARG B 288 0 SHEET 2 AA9 2 VAL B 313 VAL B 315 -1 O VAL B 313 N ARG B 288 SHEET 1 AB1 2 HIS B 291 TYR B 295 0 SHEET 2 AB1 2 ARG B 306 GLN B 310 -1 O ARG B 308 N HIS B 293 CRYST1 90.816 90.816 137.679 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011011 0.006357 0.000000 0.00000 SCALE2 0.000000 0.012715 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007263 0.00000 MTRIX1 1 0.999997 -0.001681 -0.001943 0.07971 1 MTRIX2 1 -0.001681 -0.999998 -0.000421 52.43845 1 MTRIX3 1 -0.001942 0.000424 -0.999998 -2.95287 1 MTRIX1 2 0.999855 0.016534 0.004128 -0.69647 1 MTRIX2 2 0.016455 -0.999695 0.018443 51.80393 1 MTRIX3 2 0.004431 -0.018372 -0.999821 -2.22974 1