data_7CPS # _entry.id 7CPS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7CPS pdb_00007cps 10.2210/pdb7cps/pdb WWPDB D_1300018031 ? ? BMRB 36367 ? 10.13018/BMR36367 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-08-11 2 'Structure model' 1 1 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7CPS _pdbx_database_status.recvd_initial_deposition_date 2020-08-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details ;A 2:1 stoichiometric complex of anticancer drug 4'-Epiadriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4. ; _pdbx_database_related.db_id 36367 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Barthwal, R.' 1 0000-0002-4038-2256 'Tariq, Z.' 2 0000-0001-5795-4356 'Pandav, K.' 3 0000-0002-4513-1739 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;A 2:1 stoichiometric complex of anticancer drug 4'-Epiadriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4. ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Barthwal, R.' 1 0000-0002-4038-2256 primary 'Tariq, Z.' 2 0000-0001-5795-4356 primary 'Pandav, K.' 3 0000-0002-4513-1739 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*TP*GP*GP*GP*GP*T)-3') ; 2184.444 4 ? ? ? ? 2 non-polymer syn "4'-EPIDOXORUBICIN" 544.527 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DT)(DT)(DG)(DG)(DG)(DG)(DT)' _entity_poly.pdbx_seq_one_letter_code_can TTGGGGT _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name "4'-EPIDOXORUBICIN" _pdbx_entity_nonpoly.comp_id DM6 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DT n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DG n 1 7 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'Tetrahymena thermophila' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 5911 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DM6 non-polymer . "4'-EPIDOXORUBICIN" "4'-EPIADRIAMYCIN" 'C27 H30 N O11 1' 544.527 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DT 7 7 7 DT DT A . n B 1 1 DT 1 8 8 DT DT B . n B 1 2 DT 2 9 9 DT DT B . n B 1 3 DG 3 10 10 DG DG B . n B 1 4 DG 4 11 11 DG DG B . n B 1 5 DG 5 12 12 DG DG B . n B 1 6 DG 6 13 13 DG DG B . n B 1 7 DT 7 14 14 DT DT B . n C 1 1 DT 1 15 15 DT DT C . n C 1 2 DT 2 16 16 DT DT C . n C 1 3 DG 3 17 17 DG DG C . n C 1 4 DG 4 18 18 DG DG C . n C 1 5 DG 5 19 19 DG DG C . n C 1 6 DG 6 20 20 DG DG C . n C 1 7 DT 7 21 21 DT DT C . n D 1 1 DT 1 22 22 DT DT D . n D 1 2 DT 2 23 23 DT DT D . n D 1 3 DG 3 24 24 DG DG D . n D 1 4 DG 4 25 25 DG DG D . n D 1 5 DG 5 26 26 DG DG D . n D 1 6 DG 6 27 27 DG DG D . n D 1 7 DT 7 28 28 DT DT D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 DM6 1 101 29 DM6 DM6 A . F 2 DM6 1 102 30 DM6 DM6 A . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7CPS _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7CPS _struct.title ;A 2:1 stoichiometric complex of anticancer drug 4'-Epiadriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4. ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7CPS _struct_keywords.text ;DNA, G-Quadruplex, Parallel stranded G-Quadruplex, 4'-Epirubicin, 4'-Epiadriamycin DNA-Drug Complex ; _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7CPS _struct_ref.pdbx_db_accession 7CPS _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7CPS A 1 ? 7 ? 7CPS 1 ? 7 ? 1 7 2 1 7CPS B 1 ? 7 ? 7CPS 8 ? 14 ? 8 14 3 1 7CPS C 1 ? 7 ? 7CPS 15 ? 21 ? 15 21 4 1 7CPS D 1 ? 7 ? 7CPS 22 ? 28 ? 22 28 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3910 ? 1 MORE -27 ? 1 'SSA (A^2)' 5220 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DT 1 O2 ? ? A DT 1 B DT 8 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DT 1 N3 ? ? A DT 1 B DT 8 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog3 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DT 2 N3 ? ? A DT 2 B DT 9 1_555 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog4 hydrog ? ? A DG 3 N7 ? ? ? 1_555 B DG 3 N2 ? ? A DG 3 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DG 3 N1 ? ? A DG 3 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 D DG 3 O6 ? ? A DG 3 D DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 D DG 3 N7 ? ? A DG 3 D DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 4 N7 ? ? ? 1_555 B DG 4 N2 ? ? A DG 4 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DG 4 N1 ? ? A DG 4 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 D DG 4 O6 ? ? A DG 4 D DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 D DG 4 N7 ? ? A DG 4 D DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 5 N7 ? ? ? 1_555 B DG 5 N2 ? ? A DG 5 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DG 5 N1 ? ? A DG 5 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 5 N1 ? ? ? 1_555 D DG 5 O6 ? ? A DG 5 D DG 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 5 N2 ? ? ? 1_555 D DG 5 N7 ? ? A DG 5 D DG 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 6 N7 ? ? ? 1_555 B DG 6 N2 ? ? A DG 6 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DG 6 N1 ? ? A DG 6 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 6 N1 ? ? ? 1_555 D DG 6 O6 ? ? A DG 6 D DG 27 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 6 N2 ? ? ? 1_555 D DG 6 N7 ? ? A DG 6 D DG 27 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? B DT 1 N3 ? ? ? 1_555 D DT 1 O4 ? ? B DT 8 D DT 22 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog21 hydrog ? ? B DT 1 O4 ? ? ? 1_555 D DT 1 N3 ? ? B DT 8 D DT 22 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog22 hydrog ? ? B DG 3 N7 ? ? ? 1_555 C DG 3 N2 ? ? B DG 10 C DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DG 3 N1 ? ? B DG 10 C DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? B DG 4 N7 ? ? ? 1_555 C DG 4 N2 ? ? B DG 11 C DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DG 4 N1 ? ? B DG 11 C DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? B DG 5 N7 ? ? ? 1_555 C DG 5 N2 ? ? B DG 12 C DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DG 5 N1 ? ? B DG 12 C DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? B DG 6 N7 ? ? ? 1_555 C DG 6 N2 ? ? B DG 13 C DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DG 6 N1 ? ? B DG 13 C DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DT 2 N3 ? ? C DT 16 D DT 23 1_555 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog31 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DG 3 N2 ? ? C DG 17 D DG 24 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog32 hydrog ? ? C DG 4 N7 ? ? ? 1_555 D DG 4 N2 ? ? C DG 18 D DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DG 4 N1 ? ? C DG 18 D DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? C DG 5 N7 ? ? ? 1_555 D DG 5 N2 ? ? C DG 19 D DG 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DG 5 N1 ? ? C DG 19 D DG 26 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? C DG 6 N7 ? ? ? 1_555 D DG 6 N2 ? ? C DG 20 D DG 27 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DG 6 N1 ? ? C DG 20 D DG 27 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DT 7 O4 ? ? C DT 21 D DT 28 1_555 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.28 108.30 1.98 0.30 N 2 1 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.94 122.90 -3.96 0.60 N 3 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.53 108.30 5.23 0.30 N 4 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.91 108.30 3.61 0.30 N 5 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.18 108.30 4.88 0.30 N 6 1 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.24 122.90 -3.66 0.60 N 7 1 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 112.46 108.30 4.16 0.30 N 8 1 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.28 122.90 -3.62 0.60 N 9 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 110.77 108.30 2.47 0.30 N 10 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 112.41 108.30 4.11 0.30 N 11 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.94 108.30 3.64 0.30 N 12 1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 113.16 108.30 4.86 0.30 N 13 1 C6 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 118.97 122.90 -3.93 0.60 N 14 1 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 110.33 108.30 2.03 0.30 N 15 1 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 112.52 108.30 4.22 0.30 N 16 1 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 111.06 108.30 2.76 0.30 N 17 1 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 111.64 108.30 3.34 0.30 N 18 1 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.37 108.30 5.07 0.30 N 19 1 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 119.15 122.90 -3.75 0.60 N 20 1 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 110.89 108.30 2.59 0.30 N 21 1 "O4'" D DG 24 ? ? "C1'" D DG 24 ? ? N9 D DG 24 ? ? 112.36 108.30 4.06 0.30 N 22 1 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 113.94 108.30 5.64 0.30 N 23 1 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 112.82 108.30 4.52 0.30 N 24 1 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 111.80 108.30 3.50 0.30 N 25 1 "O4'" D DT 28 ? ? "C1'" D DT 28 ? ? N1 D DT 28 ? ? 111.48 108.30 3.18 0.30 N 26 1 C6 D DT 28 ? ? C5 D DT 28 ? ? C7 D DT 28 ? ? 119.25 122.90 -3.65 0.60 N 27 2 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.78 122.90 -4.12 0.60 N 28 2 "O4'" A DT 2 ? ? "C4'" A DT 2 ? ? "C3'" A DT 2 ? ? 109.67 106.00 3.67 0.60 N 29 2 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.02 122.90 -3.88 0.60 N 30 2 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.30 108.30 3.00 0.30 N 31 2 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.04 108.30 3.74 0.30 N 32 2 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.97 108.30 2.67 0.30 N 33 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.34 108.30 3.04 0.30 N 34 2 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.84 108.30 2.54 0.30 N 35 2 C6 B DT 8 ? ? C5 B DT 8 ? ? C7 B DT 8 ? ? 119.29 122.90 -3.61 0.60 N 36 2 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.20 122.90 -3.70 0.60 N 37 2 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 110.65 108.30 2.35 0.30 N 38 2 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 110.98 108.30 2.68 0.30 N 39 2 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 112.49 108.30 4.19 0.30 N 40 2 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.40 108.30 2.10 0.30 N 41 2 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.66 108.30 4.36 0.30 N 42 2 C6 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 118.89 122.90 -4.01 0.60 N 43 2 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 110.81 108.30 2.51 0.30 N 44 2 C6 C DT 16 ? ? C5 C DT 16 ? ? C7 C DT 16 ? ? 119.13 122.90 -3.77 0.60 N 45 2 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 112.52 108.30 4.22 0.30 N 46 2 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 112.76 108.30 4.46 0.30 N 47 2 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 111.30 108.30 3.00 0.30 N 48 2 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 112.25 108.30 3.95 0.30 N 49 2 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.86 108.30 5.56 0.30 N 50 2 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 119.05 122.90 -3.85 0.60 N 51 2 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 112.58 108.30 4.28 0.30 N 52 2 C6 D DT 22 ? ? C5 D DT 22 ? ? C7 D DT 22 ? ? 119.24 122.90 -3.66 0.60 N 53 2 C6 D DT 23 ? ? C5 D DT 23 ? ? C7 D DT 23 ? ? 119.29 122.90 -3.61 0.60 N 54 2 "O4'" D DG 24 ? ? "C1'" D DG 24 ? ? N9 D DG 24 ? ? 110.32 108.30 2.02 0.30 N 55 2 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 112.31 108.30 4.01 0.30 N 56 2 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 110.51 108.30 2.21 0.30 N 57 2 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 111.13 108.30 2.83 0.30 N 58 2 N3 D DT 28 ? ? C2 D DT 28 ? ? O2 D DT 28 ? ? 118.63 122.30 -3.67 0.60 N 59 3 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 110.58 108.30 2.28 0.30 N 60 3 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.62 122.90 -4.28 0.60 N 61 3 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.22 108.30 2.92 0.30 N 62 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.21 108.30 2.91 0.30 N 63 3 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.21 108.30 4.91 0.30 N 64 3 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 111.67 108.30 3.37 0.30 N 65 3 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.22 122.90 -3.68 0.60 N 66 3 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 110.56 108.30 2.26 0.30 N 67 3 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 111.46 108.30 3.16 0.30 N 68 3 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 112.55 108.30 4.25 0.30 N 69 3 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.60 108.30 3.30 0.30 N 70 3 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.83 108.30 4.53 0.30 N 71 3 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 112.18 108.30 3.88 0.30 N 72 3 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 112.23 108.30 3.93 0.30 N 73 3 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 110.76 108.30 2.46 0.30 N 74 3 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 111.43 108.30 3.13 0.30 N 75 3 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.59 108.30 5.29 0.30 N 76 3 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 119.05 122.90 -3.85 0.60 N 77 3 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 111.57 108.30 3.27 0.30 N 78 3 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 112.31 108.30 4.01 0.30 N 79 3 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 112.43 108.30 4.13 0.30 N 80 3 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 111.59 108.30 3.29 0.30 N 81 3 N3 D DT 28 ? ? C2 D DT 28 ? ? O2 D DT 28 ? ? 118.55 122.30 -3.75 0.60 N 82 3 C6 D DT 28 ? ? C5 D DT 28 ? ? C7 D DT 28 ? ? 119.10 122.90 -3.80 0.60 N 83 4 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.01 122.90 -3.89 0.60 N 84 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.18 108.30 3.88 0.30 N 85 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.28 108.30 1.98 0.30 N 86 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.49 108.30 2.19 0.30 N 87 4 C6 B DT 8 ? ? C5 B DT 8 ? ? C7 B DT 8 ? ? 119.24 122.90 -3.66 0.60 N 88 4 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.24 122.90 -3.66 0.60 N 89 4 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.02 108.30 3.72 0.30 N 90 4 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 110.29 108.30 1.99 0.30 N 91 4 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.24 108.30 2.94 0.30 N 92 4 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.73 108.30 4.43 0.30 N 93 4 C6 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 118.91 122.90 -3.99 0.60 N 94 4 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 110.28 108.30 1.98 0.30 N 95 4 C6 C DT 15 ? ? C5 C DT 15 ? ? C7 C DT 15 ? ? 118.77 122.90 -4.13 0.60 N 96 4 C6 C DT 16 ? ? C5 C DT 16 ? ? C7 C DT 16 ? ? 119.15 122.90 -3.75 0.60 N 97 4 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 111.95 108.30 3.65 0.30 N 98 4 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 110.52 108.30 2.22 0.30 N 99 4 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 112.08 108.30 3.78 0.30 N 100 4 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 112.36 108.30 4.06 0.30 N 101 4 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.75 108.30 5.45 0.30 N 102 4 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 118.85 122.90 -4.05 0.60 N 103 4 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 111.25 108.30 2.95 0.30 N 104 4 C6 D DT 23 ? ? C5 D DT 23 ? ? C7 D DT 23 ? ? 119.14 122.90 -3.76 0.60 N 105 4 "O4'" D DG 24 ? ? "C1'" D DG 24 ? ? N9 D DG 24 ? ? 111.11 108.30 2.81 0.30 N 106 4 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 113.17 108.30 4.87 0.30 N 107 4 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 111.57 108.30 3.27 0.30 N 108 4 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 111.36 108.30 3.06 0.30 N 109 4 N3 D DT 28 ? ? C2 D DT 28 ? ? O2 D DT 28 ? ? 118.69 122.30 -3.61 0.60 N 110 5 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.63 122.90 -4.27 0.60 N 111 5 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.24 122.90 -3.66 0.60 N 112 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.05 108.30 3.75 0.30 N 113 5 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.36 108.30 5.06 0.30 N 114 5 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 112.44 108.30 4.14 0.30 N 115 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.03 108.30 4.73 0.30 N 116 5 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.17 108.30 1.87 0.30 N 117 5 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.17 122.90 -3.73 0.60 N 118 5 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 110.91 108.30 2.61 0.30 N 119 5 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 112.47 108.30 4.17 0.30 N 120 5 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 113.37 108.30 5.07 0.30 N 121 5 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 110.32 108.30 2.02 0.30 N 122 5 "O4'" C DT 16 ? ? "C1'" C DT 16 ? ? N1 C DT 16 ? ? 111.46 108.30 3.16 0.30 N 123 5 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 111.26 108.30 2.96 0.30 N 124 5 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 110.76 108.30 2.46 0.30 N 125 5 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 112.43 108.30 4.13 0.30 N 126 5 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.66 108.30 5.36 0.30 N 127 5 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 119.13 122.90 -3.77 0.60 N 128 5 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 111.05 108.30 2.75 0.30 N 129 5 N3 D DT 23 ? ? C2 D DT 23 ? ? O2 D DT 23 ? ? 118.58 122.30 -3.72 0.60 N 130 5 "O4'" D DG 24 ? ? "C1'" D DG 24 ? ? N9 D DG 24 ? ? 110.87 108.30 2.57 0.30 N 131 5 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 112.39 108.30 4.09 0.30 N 132 5 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 110.97 108.30 2.67 0.30 N 133 5 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 111.40 108.30 3.10 0.30 N 134 6 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.26 122.90 -3.64 0.60 N 135 6 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.27 108.30 1.97 0.30 N 136 6 N3 A DT 2 ? ? C2 A DT 2 ? ? O2 A DT 2 ? ? 118.64 122.30 -3.66 0.60 N 137 6 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.28 122.90 -3.62 0.60 N 138 6 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.26 108.30 1.96 0.30 N 139 6 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.70 108.30 3.40 0.30 N 140 6 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.88 108.30 2.58 0.30 N 141 6 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.53 108.30 2.23 0.30 N 142 6 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.08 122.90 -3.82 0.60 N 143 6 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 110.74 108.30 2.44 0.30 N 144 6 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 113.02 108.30 4.72 0.30 N 145 6 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 113.12 108.30 4.82 0.30 N 146 6 C6 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 119.01 122.90 -3.89 0.60 N 147 6 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 110.98 108.30 2.68 0.30 N 148 6 C6 C DT 15 ? ? C5 C DT 15 ? ? C7 C DT 15 ? ? 119.03 122.90 -3.87 0.60 N 149 6 "O4'" C DT 16 ? ? "C1'" C DT 16 ? ? N1 C DT 16 ? ? 110.16 108.30 1.86 0.30 N 150 6 C6 C DT 16 ? ? C5 C DT 16 ? ? C7 C DT 16 ? ? 119.00 122.90 -3.90 0.60 N 151 6 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 110.64 108.30 2.34 0.30 N 152 6 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 110.46 108.30 2.16 0.30 N 153 6 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 111.74 108.30 3.44 0.30 N 154 6 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 112.21 108.30 3.91 0.30 N 155 6 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.83 108.30 5.53 0.30 N 156 6 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 119.02 122.90 -3.88 0.60 N 157 6 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 111.75 108.30 3.45 0.30 N 158 6 N3 D DT 23 ? ? C2 D DT 23 ? ? O2 D DT 23 ? ? 118.54 122.30 -3.76 0.60 N 159 6 C6 D DT 23 ? ? C5 D DT 23 ? ? C7 D DT 23 ? ? 119.23 122.90 -3.67 0.60 N 160 6 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 111.90 108.30 3.60 0.30 N 161 6 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 112.10 108.30 3.80 0.30 N 162 6 "O4'" D DT 28 ? ? "C1'" D DT 28 ? ? N1 D DT 28 ? ? 111.59 108.30 3.29 0.30 N 163 6 C6 D DT 28 ? ? C5 D DT 28 ? ? C7 D DT 28 ? ? 119.18 122.90 -3.72 0.60 N 164 7 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.02 122.90 -3.88 0.60 N 165 7 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.33 108.30 3.03 0.30 N 166 7 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.38 108.30 2.08 0.30 N 167 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.40 108.30 3.10 0.30 N 168 7 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.04 122.90 -3.86 0.60 N 169 7 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.32 108.30 2.02 0.30 N 170 7 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.22 122.90 -3.68 0.60 N 171 7 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 111.00 108.30 2.70 0.30 N 172 7 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 110.34 108.30 2.04 0.30 N 173 7 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 114.29 108.30 5.99 0.30 N 174 7 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.07 108.30 2.77 0.30 N 175 7 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.75 108.30 4.45 0.30 N 176 7 C6 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 118.99 122.90 -3.91 0.60 N 177 7 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 111.03 108.30 2.73 0.30 N 178 7 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 110.22 108.30 1.92 0.30 N 179 7 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 110.11 108.30 1.81 0.30 N 180 7 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 111.85 108.30 3.55 0.30 N 181 7 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 112.49 108.30 4.19 0.30 N 182 7 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.94 108.30 5.64 0.30 N 183 7 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 119.16 122.90 -3.74 0.60 N 184 7 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 111.17 108.30 2.87 0.30 N 185 7 "O4'" D DT 23 ? ? "C1'" D DT 23 ? ? N1 D DT 23 ? ? 110.10 108.30 1.80 0.30 N 186 7 N3 D DT 23 ? ? C2 D DT 23 ? ? O2 D DT 23 ? ? 118.68 122.30 -3.62 0.60 N 187 7 "O4'" D DG 24 ? ? "C1'" D DG 24 ? ? N9 D DG 24 ? ? 111.59 108.30 3.29 0.30 N 188 7 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 112.08 108.30 3.78 0.30 N 189 7 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 110.65 108.30 2.35 0.30 N 190 7 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 111.35 108.30 3.05 0.30 N 191 7 C6 D DT 28 ? ? C5 D DT 28 ? ? C7 D DT 28 ? ? 119.29 122.90 -3.61 0.60 N 192 8 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.35 122.90 -4.55 0.60 N 193 8 N3 A DT 2 ? ? C2 A DT 2 ? ? O2 A DT 2 ? ? 118.62 122.30 -3.68 0.60 N 194 8 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.30 122.90 -3.60 0.60 N 195 8 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.05 108.30 3.75 0.30 N 196 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.90 108.30 2.60 0.30 N 197 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.16 108.30 2.86 0.30 N 198 8 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.10 122.90 -3.80 0.60 N 199 8 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.14 122.90 -3.76 0.60 N 200 8 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 111.37 108.30 3.07 0.30 N 201 8 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 111.06 108.30 2.76 0.30 N 202 8 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 113.75 108.30 5.45 0.30 N 203 8 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.62 108.30 3.32 0.30 N 204 8 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.99 108.30 4.69 0.30 N 205 8 C6 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 118.97 122.90 -3.93 0.60 N 206 8 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 112.77 108.30 4.47 0.30 N 207 8 C6 C DT 16 ? ? C5 C DT 16 ? ? C7 C DT 16 ? ? 119.18 122.90 -3.72 0.60 N 208 8 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 111.26 108.30 2.96 0.30 N 209 8 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 112.59 108.30 4.29 0.30 N 210 8 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 110.92 108.30 2.62 0.30 N 211 8 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 112.14 108.30 3.84 0.30 N 212 8 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.72 108.30 5.42 0.30 N 213 8 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 118.91 122.90 -3.99 0.60 N 214 8 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 111.78 108.30 3.48 0.30 N 215 8 N3 D DT 23 ? ? C2 D DT 23 ? ? O2 D DT 23 ? ? 118.64 122.30 -3.66 0.60 N 216 8 "O4'" D DG 24 ? ? "C1'" D DG 24 ? ? N9 D DG 24 ? ? 110.44 108.30 2.14 0.30 N 217 8 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 112.40 108.30 4.10 0.30 N 218 8 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 111.81 108.30 3.51 0.30 N 219 8 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 111.96 108.30 3.66 0.30 N 220 8 "O4'" D DT 28 ? ? "C1'" D DT 28 ? ? N1 D DT 28 ? ? 110.96 108.30 2.66 0.30 N 221 9 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.37 108.30 3.07 0.30 N 222 9 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.85 122.90 -4.05 0.60 N 223 9 "O4'" A DT 2 ? ? "C4'" A DT 2 ? ? "C3'" A DT 2 ? ? 109.78 106.00 3.78 0.60 N 224 9 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.27 122.90 -3.63 0.60 N 225 9 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 112.65 108.30 4.35 0.30 N 226 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.47 108.30 2.17 0.30 N 227 9 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.96 108.30 4.66 0.30 N 228 9 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.22 122.90 -3.68 0.60 N 229 9 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 112.19 108.30 3.89 0.30 N 230 9 C6 B DT 8 ? ? C5 B DT 8 ? ? C7 B DT 8 ? ? 119.23 122.90 -3.67 0.60 N 231 9 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.25 122.90 -3.65 0.60 N 232 9 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 111.15 108.30 2.85 0.30 N 233 9 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.40 108.30 4.10 0.30 N 234 9 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 110.56 108.30 2.26 0.30 N 235 9 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.55 108.30 3.25 0.30 N 236 9 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 111.21 108.30 2.91 0.30 N 237 9 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 111.41 108.30 3.11 0.30 N 238 9 "O4'" C DT 16 ? ? "C1'" C DT 16 ? ? N1 C DT 16 ? ? 110.43 108.30 2.13 0.30 N 239 9 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 111.57 108.30 3.27 0.30 N 240 9 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 111.49 108.30 3.19 0.30 N 241 9 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 111.14 108.30 2.84 0.30 N 242 9 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 112.00 108.30 3.70 0.30 N 243 9 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 113.14 108.30 4.84 0.30 N 244 9 C6 C DT 21 ? ? C5 C DT 21 ? ? C7 C DT 21 ? ? 119.15 122.90 -3.75 0.60 N 245 9 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 111.24 108.30 2.94 0.30 N 246 9 C6 D DT 22 ? ? C5 D DT 22 ? ? C7 D DT 22 ? ? 119.19 122.90 -3.71 0.60 N 247 9 "O4'" D DG 24 ? ? "C1'" D DG 24 ? ? N9 D DG 24 ? ? 110.68 108.30 2.38 0.30 N 248 9 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 112.58 108.30 4.28 0.30 N 249 9 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 111.59 108.30 3.29 0.30 N 250 9 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 112.04 108.30 3.74 0.30 N 251 10 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 119.18 122.90 -3.72 0.60 N 252 10 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.18 108.30 1.88 0.30 N 253 10 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.11 122.90 -3.79 0.60 N 254 10 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.41 108.30 3.11 0.30 N 255 10 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.98 108.30 2.68 0.30 N 256 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.56 108.30 5.26 0.30 N 257 10 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.72 122.90 -4.18 0.60 N 258 10 "O4'" B DT 8 ? ? "C1'" B DT 8 ? ? N1 B DT 8 ? ? 110.21 108.30 1.91 0.30 N 259 10 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.12 122.90 -3.78 0.60 N 260 10 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.05 108.30 3.75 0.30 N 261 10 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 112.15 108.30 3.85 0.30 N 262 10 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.53 108.30 3.23 0.30 N 263 10 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 112.88 108.30 4.58 0.30 N 264 10 C6 B DT 14 ? ? C5 B DT 14 ? ? C7 B DT 14 ? ? 118.93 122.90 -3.97 0.60 N 265 10 "O4'" C DT 15 ? ? "C1'" C DT 15 ? ? N1 C DT 15 ? ? 110.61 108.30 2.31 0.30 N 266 10 "O4'" C DT 16 ? ? "C1'" C DT 16 ? ? N1 C DT 16 ? ? 111.31 108.30 3.01 0.30 N 267 10 C6 C DT 16 ? ? C5 C DT 16 ? ? C7 C DT 16 ? ? 119.16 122.90 -3.74 0.60 N 268 10 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 112.54 108.30 4.24 0.30 N 269 10 "O4'" C DG 18 ? ? "C1'" C DG 18 ? ? N9 C DG 18 ? ? 112.31 108.30 4.01 0.30 N 270 10 "O4'" C DG 19 ? ? "C1'" C DG 19 ? ? N9 C DG 19 ? ? 111.40 108.30 3.10 0.30 N 271 10 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 111.46 108.30 3.16 0.30 N 272 10 "O4'" C DT 21 ? ? "C1'" C DT 21 ? ? N1 C DT 21 ? ? 112.78 108.30 4.48 0.30 N 273 10 "O4'" D DT 22 ? ? "C1'" D DT 22 ? ? N1 D DT 22 ? ? 111.99 108.30 3.69 0.30 N 274 10 C6 D DT 22 ? ? C5 D DT 22 ? ? C7 D DT 22 ? ? 119.23 122.90 -3.67 0.60 N 275 10 "O4'" D DG 24 ? ? "C1'" D DG 24 ? ? N9 D DG 24 ? ? 112.64 108.30 4.34 0.30 N 276 10 "O4'" D DG 25 ? ? "C1'" D DG 25 ? ? N9 D DG 25 ? ? 113.40 108.30 5.10 0.30 N 277 10 "O4'" D DG 26 ? ? "C1'" D DG 26 ? ? N9 D DG 26 ? ? 111.79 108.30 3.49 0.30 N 278 10 "O4'" D DG 27 ? ? "C1'" D DG 27 ? ? N9 D DG 27 ? ? 111.81 108.30 3.51 0.30 N 279 10 "O4'" D DT 28 ? ? "C1'" D DT 28 ? ? N1 D DT 28 ? ? 110.86 108.30 2.56 0.30 N 280 10 C6 D DT 28 ? ? C5 D DT 28 ? ? C7 D DT 28 ? ? 119.29 122.90 -3.61 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 5 ? ? 0.051 'SIDE CHAIN' 2 1 DT A 7 ? ? 0.058 'SIDE CHAIN' 3 1 DG B 13 ? ? 0.065 'SIDE CHAIN' 4 1 DT C 16 ? ? 0.062 'SIDE CHAIN' 5 1 DG D 25 ? ? 0.079 'SIDE CHAIN' 6 2 DG B 12 ? ? 0.061 'SIDE CHAIN' 7 2 DG C 20 ? ? 0.074 'SIDE CHAIN' 8 3 DG A 4 ? ? 0.063 'SIDE CHAIN' 9 3 DT D 23 ? ? 0.085 'SIDE CHAIN' 10 4 DT A 1 ? ? 0.077 'SIDE CHAIN' 11 4 DG C 20 ? ? 0.089 'SIDE CHAIN' 12 4 DT C 21 ? ? 0.082 'SIDE CHAIN' 13 4 DT D 23 ? ? 0.077 'SIDE CHAIN' 14 4 DG D 25 ? ? 0.058 'SIDE CHAIN' 15 5 DG C 20 ? ? 0.071 'SIDE CHAIN' 16 5 DG D 25 ? ? 0.055 'SIDE CHAIN' 17 6 DG B 12 ? ? 0.069 'SIDE CHAIN' 18 6 DT B 14 ? ? 0.058 'SIDE CHAIN' 19 6 DG C 19 ? ? 0.055 'SIDE CHAIN' 20 6 DG C 20 ? ? 0.054 'SIDE CHAIN' 21 6 DT D 23 ? ? 0.062 'SIDE CHAIN' 22 7 DG B 12 ? ? 0.075 'SIDE CHAIN' 23 7 DG C 20 ? ? 0.071 'SIDE CHAIN' 24 7 DG D 25 ? ? 0.054 'SIDE CHAIN' 25 8 DG B 12 ? ? 0.063 'SIDE CHAIN' 26 8 DG B 13 ? ? 0.081 'SIDE CHAIN' 27 8 DT B 14 ? ? 0.066 'SIDE CHAIN' 28 8 DG C 20 ? ? 0.060 'SIDE CHAIN' 29 8 DT C 21 ? ? 0.061 'SIDE CHAIN' 30 8 DT D 23 ? ? 0.069 'SIDE CHAIN' 31 8 DG D 25 ? ? 0.064 'SIDE CHAIN' 32 9 DT C 21 ? ? 0.071 'SIDE CHAIN' 33 10 DG A 3 ? ? 0.052 'SIDE CHAIN' 34 10 DG B 10 ? ? 0.051 'SIDE CHAIN' # _pdbx_entry_details.entry_id 7CPS _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_nmr_ensemble.entry_id 7CPS _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7CPS _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1.03 mM DNA (5'-D(*TP*TP*GP*GP*GP*GP*T)-3'), 2.06 mM 4'-EPIDOXORUBICIN, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 1H _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*TP*TP*GP*GP*GP*GP*T)-3') ; 1.03 ? mM 'natural abundance' 1 "4'-EPIDOXORUBICIN" 2.06 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 'Condition 1' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '1D 1H' 1 isotropic # _pdbx_nmr_refine.entry_id 7CPS _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 4 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 2 'chemical shift assignment' TopSpin 3.6.01 'Bruker Biospin' 3 processing TopSpin 3.6.1 'Bruker Biospin' 4 refinement Amber 16 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DG OP3 O N N 1 DG P P N N 2 DG OP1 O N N 3 DG OP2 O N N 4 DG "O5'" O N N 5 DG "C5'" C N N 6 DG "C4'" C N R 7 DG "O4'" O N N 8 DG "C3'" C N S 9 DG "O3'" O N N 10 DG "C2'" C N N 11 DG "C1'" C N R 12 DG N9 N Y N 13 DG C8 C Y N 14 DG N7 N Y N 15 DG C5 C Y N 16 DG C6 C N N 17 DG O6 O N N 18 DG N1 N N N 19 DG C2 C N N 20 DG N2 N N N 21 DG N3 N N N 22 DG C4 C Y N 23 DG HOP3 H N N 24 DG HOP2 H N N 25 DG "H5'" H N N 26 DG "H5''" H N N 27 DG "H4'" H N N 28 DG "H3'" H N N 29 DG "HO3'" H N N 30 DG "H2'" H N N 31 DG "H2''" H N N 32 DG "H1'" H N N 33 DG H8 H N N 34 DG H1 H N N 35 DG H21 H N N 36 DG H22 H N N 37 DM6 C1 C Y N 38 DM6 C2 C Y N 39 DM6 C3 C Y N 40 DM6 C4 C Y N 41 DM6 C5 C N N 42 DM6 C6 C Y N 43 DM6 C7 C N S 44 DM6 C8 C N N 45 DM6 C9 C N S 46 DM6 C10 C N N 47 DM6 C11 C Y N 48 DM6 C12 C N N 49 DM6 C13 C N N 50 DM6 C14 C N N 51 DM6 C15 C Y N 52 DM6 C16 C Y N 53 DM6 C17 C Y N 54 DM6 C18 C Y N 55 DM6 C19 C Y N 56 DM6 C20 C Y N 57 DM6 C21 C N N 58 DM6 O4 O N N 59 DM6 O5 O N N 60 DM6 O6 O N N 61 DM6 O7 O N N 62 DM6 O9 O N N 63 DM6 O11 O N N 64 DM6 O12 O N N 65 DM6 O13 O N N 66 DM6 O14 O N N 67 DM6 "C1'" C N R 68 DM6 "C2'" C N N 69 DM6 "C3'" C N S 70 DM6 "C4'" C N R 71 DM6 "C5'" C N S 72 DM6 "C6'" C N N 73 DM6 "O4'" O N N 74 DM6 "O5'" O N N 75 DM6 "N3'" N N N 76 DM6 H1 H N N 77 DM6 H2 H N N 78 DM6 H3 H N N 79 DM6 H7 H N N 80 DM6 H81 H N N 81 DM6 H82 H N N 82 DM6 H101 H N N 83 DM6 H102 H N N 84 DM6 H141 H N N 85 DM6 H142 H N N 86 DM6 H211 H N N 87 DM6 H212 H N N 88 DM6 H213 H N N 89 DM6 HO6 H N N 90 DM6 HO9 H N N 91 DM6 HO11 H N N 92 DM6 HO14 H N N 93 DM6 "H1'" H N N 94 DM6 "H2'1" H N N 95 DM6 "H2'2" H N N 96 DM6 "H3'" H N N 97 DM6 "H4'" H N N 98 DM6 "H5'" H N N 99 DM6 "H6'1" H N N 100 DM6 "H6'2" H N N 101 DM6 "H6'3" H N N 102 DM6 "HO'4" H N N 103 DM6 "HN'1" H N N 104 DM6 "HN'2" H N N 105 DM6 "HN'3" H N N 106 DT OP3 O N N 107 DT P P N N 108 DT OP1 O N N 109 DT OP2 O N N 110 DT "O5'" O N N 111 DT "C5'" C N N 112 DT "C4'" C N R 113 DT "O4'" O N N 114 DT "C3'" C N S 115 DT "O3'" O N N 116 DT "C2'" C N N 117 DT "C1'" C N R 118 DT N1 N N N 119 DT C2 C N N 120 DT O2 O N N 121 DT N3 N N N 122 DT C4 C N N 123 DT O4 O N N 124 DT C5 C N N 125 DT C7 C N N 126 DT C6 C N N 127 DT HOP3 H N N 128 DT HOP2 H N N 129 DT "H5'" H N N 130 DT "H5''" H N N 131 DT "H4'" H N N 132 DT "H3'" H N N 133 DT "HO3'" H N N 134 DT "H2'" H N N 135 DT "H2''" H N N 136 DT "H1'" H N N 137 DT H3 H N N 138 DT H71 H N N 139 DT H72 H N N 140 DT H73 H N N 141 DT H6 H N N 142 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DG OP3 P sing N N 1 DG OP3 HOP3 sing N N 2 DG P OP1 doub N N 3 DG P OP2 sing N N 4 DG P "O5'" sing N N 5 DG OP2 HOP2 sing N N 6 DG "O5'" "C5'" sing N N 7 DG "C5'" "C4'" sing N N 8 DG "C5'" "H5'" sing N N 9 DG "C5'" "H5''" sing N N 10 DG "C4'" "O4'" sing N N 11 DG "C4'" "C3'" sing N N 12 DG "C4'" "H4'" sing N N 13 DG "O4'" "C1'" sing N N 14 DG "C3'" "O3'" sing N N 15 DG "C3'" "C2'" sing N N 16 DG "C3'" "H3'" sing N N 17 DG "O3'" "HO3'" sing N N 18 DG "C2'" "C1'" sing N N 19 DG "C2'" "H2'" sing N N 20 DG "C2'" "H2''" sing N N 21 DG "C1'" N9 sing N N 22 DG "C1'" "H1'" sing N N 23 DG N9 C8 sing Y N 24 DG N9 C4 sing Y N 25 DG C8 N7 doub Y N 26 DG C8 H8 sing N N 27 DG N7 C5 sing Y N 28 DG C5 C6 sing N N 29 DG C5 C4 doub Y N 30 DG C6 O6 doub N N 31 DG C6 N1 sing N N 32 DG N1 C2 sing N N 33 DG N1 H1 sing N N 34 DG C2 N2 sing N N 35 DG C2 N3 doub N N 36 DG N2 H21 sing N N 37 DG N2 H22 sing N N 38 DG N3 C4 sing N N 39 DM6 C1 C2 doub Y N 40 DM6 C1 C15 sing Y N 41 DM6 C1 H1 sing N N 42 DM6 C2 C3 sing Y N 43 DM6 C2 H2 sing N N 44 DM6 C3 C4 doub Y N 45 DM6 C3 H3 sing N N 46 DM6 C4 C16 sing Y N 47 DM6 C4 O4 sing N N 48 DM6 C5 C16 sing N N 49 DM6 C5 C17 sing N N 50 DM6 C5 O5 doub N N 51 DM6 C6 C17 doub Y N 52 DM6 C6 C20 sing Y N 53 DM6 C6 O6 sing N N 54 DM6 C7 C8 sing N N 55 DM6 C7 C20 sing N N 56 DM6 C7 O7 sing N N 57 DM6 C7 H7 sing N N 58 DM6 C8 C9 sing N N 59 DM6 C8 H81 sing N N 60 DM6 C8 H82 sing N N 61 DM6 C9 C10 sing N N 62 DM6 C9 C13 sing N N 63 DM6 C9 O9 sing N N 64 DM6 C10 C19 sing N N 65 DM6 C10 H101 sing N N 66 DM6 C10 H102 sing N N 67 DM6 C11 C18 doub Y N 68 DM6 C11 C19 sing Y N 69 DM6 C11 O11 sing N N 70 DM6 C12 C15 sing N N 71 DM6 C12 C18 sing N N 72 DM6 C12 O12 doub N N 73 DM6 C13 C14 sing N N 74 DM6 C13 O13 doub N N 75 DM6 C14 O14 sing N N 76 DM6 C14 H141 sing N N 77 DM6 C14 H142 sing N N 78 DM6 C15 C16 doub Y N 79 DM6 C17 C18 sing Y N 80 DM6 C19 C20 doub Y N 81 DM6 C21 O4 sing N N 82 DM6 C21 H211 sing N N 83 DM6 C21 H212 sing N N 84 DM6 C21 H213 sing N N 85 DM6 O6 HO6 sing N N 86 DM6 O7 "C1'" sing N N 87 DM6 O9 HO9 sing N N 88 DM6 O11 HO11 sing N N 89 DM6 O14 HO14 sing N N 90 DM6 "C1'" "C2'" sing N N 91 DM6 "C1'" "O5'" sing N N 92 DM6 "C1'" "H1'" sing N N 93 DM6 "C2'" "C3'" sing N N 94 DM6 "C2'" "H2'1" sing N N 95 DM6 "C2'" "H2'2" sing N N 96 DM6 "C3'" "C4'" sing N N 97 DM6 "C3'" "N3'" sing N N 98 DM6 "C3'" "H3'" sing N N 99 DM6 "C4'" "C5'" sing N N 100 DM6 "C4'" "O4'" sing N N 101 DM6 "C4'" "H4'" sing N N 102 DM6 "C5'" "C6'" sing N N 103 DM6 "C5'" "O5'" sing N N 104 DM6 "C5'" "H5'" sing N N 105 DM6 "C6'" "H6'1" sing N N 106 DM6 "C6'" "H6'2" sing N N 107 DM6 "C6'" "H6'3" sing N N 108 DM6 "O4'" "HO'4" sing N N 109 DM6 "N3'" "HN'1" sing N N 110 DM6 "N3'" "HN'2" sing N N 111 DM6 "N3'" "HN'3" sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7CPS 'double helix' 7CPS 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D DG 3 1_555 A DG 3 1_555 2.042 -3.013 -0.114 3.135 -11.681 -97.676 1 D_DG24:DG3_A D 24 ? A 3 ? 6 3 1 B DT 2 1_555 A DT 2 1_555 0.011 2.736 -0.101 5.959 7.911 110.894 2 B_DT9:DT2_A B 9 ? A 2 ? ? ? 1 C DT 2 1_555 D DT 2 1_555 -0.156 -2.736 0.552 -18.466 -1.639 -116.189 3 C_DT16:DT23_D C 16 ? D 23 ? ? ? 1 B DT 1 1_555 A DT 1 1_555 -2.728 -2.031 0.985 13.042 24.015 0.241 4 B_DT8:DT1_A B 8 ? A 1 ? 16 1 1 D DT 7 1_555 C DT 7 1_555 2.612 -2.806 2.180 17.151 -50.064 -52.553 5 D_DT28:DT21_C D 28 ? C 21 ? ? ? 1 C DG 6 1_555 D DG 6 1_555 2.215 -3.022 0.114 13.098 20.496 -89.473 6 C_DG20:DG27_D C 20 ? D 27 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D DG 3 1_555 A DG 3 1_555 B DT 2 1_555 A DT 2 1_555 -2.013 2.202 2.893 15.980 18.841 118.317 1.109 1.301 2.917 10.913 -9.256 119.895 1 DB_DG24DT9:DT2DG3_AA D 24 ? A 3 ? B 9 ? A 2 ? 1 B DT 2 1_555 A DT 2 1_555 C DT 2 1_555 D DT 2 1_555 -1.981 4.958 0.635 1.850 25.955 179.811 2.479 0.990 0.637 12.978 -0.925 179.815 2 BC_DT9DT16:DT23DT2_DA B 9 ? A 2 ? C 16 ? D 23 ? 1 C DT 2 1_555 D DT 2 1_555 B DT 1 1_555 A DT 1 1_555 -0.437 -0.421 4.519 11.812 -1.788 -112.448 0.281 -0.075 4.534 1.074 7.094 -112.863 3 CB_DT16DT8:DT1DT23_AD C 16 ? D 23 ? B 8 ? A 1 ? 1 D DT 7 1_555 C DT 7 1_555 C DG 6 1_555 D DG 6 1_555 -2.157 0.821 4.689 15.910 -4.977 -60.454 -0.446 -0.975 5.107 4.844 15.487 -62.500 4 DC_DT28DG20:DG27DT21_DC D 28 ? C 21 ? C 20 ? D 27 ? # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id DM6 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id DM6 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 7CPS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_