HEADER VIRAL PROTEIN 23-SEP-20 7D4F TITLE STRUCTURE OF COVID-19 RNA-DEPENDENT RNA POLYMERASE BOUND TO SURAMIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 8; COMPND 3 CHAIN: B, G; COMPND 4 SYNONYM: NSP8; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NON-STRUCTURAL PROTEIN 7; COMPND 8 CHAIN: C; COMPND 9 SYNONYM: NSP7; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 13 CHAIN: A; COMPND 14 SYNONYM: POL,RDRP,NON-STRUCTURAL PROTEIN 12,NSP12; COMPND 15 EC: 2.7.7.48; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 11 2; SOURCE 12 ORGANISM_COMMON: 2019-NCOV; SOURCE 13 ORGANISM_TAXID: 2697049; SOURCE 14 GENE: REP, 1A-1B; SOURCE 15 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 19 2; SOURCE 20 ORGANISM_COMMON: 2019-NCOV; SOURCE 21 ORGANISM_TAXID: 2697049; SOURCE 22 GENE: REP, 1A-1B; SOURCE 23 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS COVID-19, RNA POLYMERASE, SURAMIN BINDING, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Z.LI,W.YIN,Z.ZHOU,X.YU,H.XU REVDAT 5 27-MAR-24 7D4F 1 REMARK REVDAT 4 24-MAR-21 7D4F 1 JRNL REVDAT 3 17-MAR-21 7D4F 1 JRNL REVDAT 2 10-MAR-21 7D4F 1 COMPND REVDAT 1 11-NOV-20 7D4F 0 JRNL AUTH W.YIN,X.LUAN,Z.LI,Z.ZHOU,Q.WANG,M.GAO,X.WANG,F.ZHOU,J.SHI, JRNL AUTH 2 E.YOU,M.LIU,Q.WANG,Y.JIANG,H.JIANG,G.XIAO,L.ZHANG,X.YU, JRNL AUTH 3 S.ZHANG,H.ERIC XU JRNL TITL STRUCTURAL BASIS FOR INHIBITION OF THE SARS-COV-2 RNA JRNL TITL 2 POLYMERASE BY SURAMIN. JRNL REF NAT.STRUCT.MOL.BIOL. V. 28 319 2021 JRNL REFN ESSN 1545-9985 JRNL PMID 33674802 JRNL DOI 10.1038/S41594-021-00570-0 REMARK 2 REMARK 2 RESOLUTION. 2.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.570 REMARK 3 NUMBER OF PARTICLES : 95845 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7D4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1300018711. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COVID-19 RDRP COMPLEX BOUND TO REMARK 245 SURAMIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6800.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, G, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 0 REMARK 465 ALA B 1 REMARK 465 ILE B 2 REMARK 465 ALA B 3 REMARK 465 SER B 4 REMARK 465 GLU B 5 REMARK 465 PHE B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 LEU B 9 REMARK 465 PRO B 10 REMARK 465 SER B 11 REMARK 465 TYR B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 PHE B 15 REMARK 465 ALA B 16 REMARK 465 THR B 17 REMARK 465 ALA B 18 REMARK 465 GLN B 19 REMARK 465 GLU B 20 REMARK 465 ALA B 21 REMARK 465 TYR B 22 REMARK 465 GLU B 23 REMARK 465 GLN B 24 REMARK 465 ALA B 25 REMARK 465 VAL B 26 REMARK 465 ALA B 27 REMARK 465 ASN B 28 REMARK 465 GLY B 29 REMARK 465 ASP B 30 REMARK 465 SER B 31 REMARK 465 GLU B 32 REMARK 465 VAL B 33 REMARK 465 VAL B 34 REMARK 465 LEU B 35 REMARK 465 LYS B 36 REMARK 465 LYS B 37 REMARK 465 LEU B 38 REMARK 465 LYS B 39 REMARK 465 LYS B 40 REMARK 465 SER B 41 REMARK 465 LEU B 42 REMARK 465 ASN B 43 REMARK 465 VAL B 44 REMARK 465 ALA B 45 REMARK 465 LYS B 46 REMARK 465 SER B 47 REMARK 465 GLU B 48 REMARK 465 PHE B 49 REMARK 465 ASP B 50 REMARK 465 ARG B 51 REMARK 465 ASP B 52 REMARK 465 ALA B 53 REMARK 465 ALA B 54 REMARK 465 MET B 55 REMARK 465 GLN B 56 REMARK 465 ARG B 57 REMARK 465 LYS B 58 REMARK 465 LEU B 59 REMARK 465 GLU B 60 REMARK 465 LYS B 61 REMARK 465 MET B 62 REMARK 465 ALA B 63 REMARK 465 ASP B 64 REMARK 465 GLN B 65 REMARK 465 ALA B 66 REMARK 465 MET B 67 REMARK 465 THR B 68 REMARK 465 GLN B 69 REMARK 465 MET B 70 REMARK 465 TYR B 71 REMARK 465 LYS B 72 REMARK 465 GLN B 73 REMARK 465 ALA B 74 REMARK 465 ARG B 75 REMARK 465 SER B 76 REMARK 465 GLU B 77 REMARK 465 ASN B 192 REMARK 465 SER B 193 REMARK 465 ALA B 194 REMARK 465 VAL B 195 REMARK 465 LYS B 196 REMARK 465 LEU B 197 REMARK 465 GLN B 198 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 ALA C 65 REMARK 465 VAL C 66 REMARK 465 ASP C 67 REMARK 465 ILE C 68 REMARK 465 ASN C 69 REMARK 465 LYS C 70 REMARK 465 LEU C 71 REMARK 465 CYS C 72 REMARK 465 GLU C 73 REMARK 465 GLU C 74 REMARK 465 MET C 75 REMARK 465 LEU C 76 REMARK 465 ASP C 77 REMARK 465 ASN C 78 REMARK 465 ARG C 79 REMARK 465 ALA C 80 REMARK 465 THR C 81 REMARK 465 LEU C 82 REMARK 465 GLN C 83 REMARK 465 MET G 0 REMARK 465 ALA G 1 REMARK 465 ILE G 2 REMARK 465 ALA G 3 REMARK 465 SER G 4 REMARK 465 GLU G 5 REMARK 465 PHE G 6 REMARK 465 SER G 7 REMARK 465 SER G 8 REMARK 465 LEU G 9 REMARK 465 PRO G 10 REMARK 465 SER G 11 REMARK 465 TYR G 12 REMARK 465 ALA G 13 REMARK 465 ALA G 14 REMARK 465 PHE G 15 REMARK 465 ALA G 16 REMARK 465 THR G 17 REMARK 465 ALA G 18 REMARK 465 GLN G 19 REMARK 465 GLU G 20 REMARK 465 ALA G 21 REMARK 465 TYR G 22 REMARK 465 GLU G 23 REMARK 465 GLN G 24 REMARK 465 ALA G 25 REMARK 465 VAL G 26 REMARK 465 ALA G 27 REMARK 465 ASN G 28 REMARK 465 GLY G 29 REMARK 465 ASP G 30 REMARK 465 SER G 31 REMARK 465 GLU G 32 REMARK 465 VAL G 33 REMARK 465 VAL G 34 REMARK 465 LEU G 35 REMARK 465 LYS G 36 REMARK 465 LYS G 37 REMARK 465 LEU G 38 REMARK 465 LYS G 39 REMARK 465 LYS G 40 REMARK 465 SER G 41 REMARK 465 LEU G 42 REMARK 465 ASN G 43 REMARK 465 VAL G 44 REMARK 465 ALA G 45 REMARK 465 LYS G 46 REMARK 465 SER G 47 REMARK 465 GLU G 48 REMARK 465 PHE G 49 REMARK 465 ASP G 50 REMARK 465 ARG G 51 REMARK 465 ASP G 52 REMARK 465 ALA G 53 REMARK 465 ALA G 54 REMARK 465 MET G 55 REMARK 465 GLN G 56 REMARK 465 ARG G 57 REMARK 465 LYS G 58 REMARK 465 LEU G 59 REMARK 465 GLU G 60 REMARK 465 LYS G 61 REMARK 465 MET G 62 REMARK 465 ALA G 63 REMARK 465 ASP G 64 REMARK 465 GLN G 65 REMARK 465 ALA G 66 REMARK 465 MET G 67 REMARK 465 THR G 68 REMARK 465 GLN G 69 REMARK 465 MET G 70 REMARK 465 TYR G 71 REMARK 465 LYS G 72 REMARK 465 GLN G 73 REMARK 465 ALA G 74 REMARK 465 ARG G 75 REMARK 465 SER G 76 REMARK 465 GLU G 77 REMARK 465 ASP G 78 REMARK 465 LYS G 79 REMARK 465 ARG G 80 REMARK 465 ALA G 81 REMARK 465 LYS G 82 REMARK 465 VAL G 83 REMARK 465 LEU G 180 REMARK 465 ALA G 181 REMARK 465 ASN G 192 REMARK 465 SER G 193 REMARK 465 ALA G 194 REMARK 465 VAL G 195 REMARK 465 LYS G 196 REMARK 465 LEU G 197 REMARK 465 GLN G 198 REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 ALA A 4 REMARK 465 GLN A 5 REMARK 465 GLY A 23 REMARK 465 THR A 24 REMARK 465 GLY A 25 REMARK 465 THR A 26 REMARK 465 SER A 27 REMARK 465 THR A 28 REMARK 465 ASP A 29 REMARK 465 VAL A 30 REMARK 465 ASP A 107 REMARK 465 GLY A 108 REMARK 465 ASP A 109 REMARK 465 THR A 896 REMARK 465 GLY A 897 REMARK 465 HIS A 898 REMARK 465 MET A 899 REMARK 465 LEU A 900 REMARK 465 ASP A 901 REMARK 465 MET A 902 REMARK 465 TYR A 903 REMARK 465 SER A 904 REMARK 465 VAL A 905 REMARK 465 MET A 906 REMARK 465 LEU A 907 REMARK 465 THR A 908 REMARK 465 ASN A 909 REMARK 465 ASP A 910 REMARK 465 VAL A 930 REMARK 465 LEU A 931 REMARK 465 GLN A 932 REMARK 465 GLY A 933 REMARK 465 GLY A 934 REMARK 465 SER A 935 REMARK 465 GLU A 936 REMARK 465 ASN A 937 REMARK 465 LEU A 938 REMARK 465 TYR A 939 REMARK 465 PHE A 940 REMARK 465 GLN A 941 REMARK 465 GLY A 942 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG1 VAL A 14 OD2 ASP A 100 1.33 REMARK 500 NH1 ARG A 553 O34 H3U A 1004 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 760 CB - CG - OD1 ANGL. DEV. = 8.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN G 157 -61.01 -92.00 REMARK 500 ASN A 39 -167.61 -123.73 REMARK 500 ASP A 63 57.46 -97.78 REMARK 500 ASP A 67 11.60 -69.38 REMARK 500 ASN A 168 84.95 -154.62 REMARK 500 LEU A 251 33.16 -98.70 REMARK 500 ASP A 336 49.07 32.87 REMARK 500 VAL A 398 -63.31 -97.84 REMARK 500 ASN A 496 -71.65 -60.19 REMARK 500 ASP A 608 29.59 -145.61 REMARK 500 SER A 759 70.03 54.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 295 ND1 REMARK 620 2 CYS A 301 SG 109.1 REMARK 620 3 CYS A 306 SG 100.5 105.2 REMARK 620 4 CYS A 310 SG 107.4 115.7 117.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 487 SG REMARK 620 2 CYS A 645 SG 111.9 REMARK 620 3 CYS A 646 SG 104.8 131.7 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-30572 RELATED DB: EMDB REMARK 900 STRUCTURE OF COVID-19 RNA-DEPENDENT RNA POLYMERASE BOUND TO SURAMIN DBREF 7D4F B 1 198 UNP P0DTD1 R1AB_SARS2 3943 4140 DBREF 7D4F C 1 83 UNP P0DTD1 R1AB_SARS2 3860 3942 DBREF 7D4F G 1 198 UNP P0DTD1 R1AB_SARS2 3943 4140 DBREF 7D4F A 1 932 UNP P0DTD1 R1AB_SARS2 4393 5324 SEQADV 7D4F MET B 0 UNP P0DTD1 INITIATING METHIONINE SEQADV 7D4F MET C 0 UNP P0DTD1 INITIATING METHIONINE SEQADV 7D4F MET G 0 UNP P0DTD1 INITIATING METHIONINE SEQADV 7D4F MET A 0 UNP P0DTD1 INITIATING METHIONINE SEQADV 7D4F GLY A 933 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F GLY A 934 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F SER A 935 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F GLU A 936 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F ASN A 937 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F LEU A 938 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F TYR A 939 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F PHE A 940 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F GLN A 941 UNP P0DTD1 EXPRESSION TAG SEQADV 7D4F GLY A 942 UNP P0DTD1 EXPRESSION TAG SEQRES 1 B 199 MET ALA ILE ALA SER GLU PHE SER SER LEU PRO SER TYR SEQRES 2 B 199 ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU GLN ALA SEQRES 3 B 199 VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS LYS LEU SEQRES 4 B 199 LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE ASP ARG SEQRES 5 B 199 ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET ALA ASP SEQRES 6 B 199 GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SER GLU SEQRES 7 B 199 ASP LYS ARG ALA LYS VAL THR SER ALA MET GLN THR MET SEQRES 8 B 199 LEU PHE THR MET LEU ARG LYS LEU ASP ASN ASP ALA LEU SEQRES 9 B 199 ASN ASN ILE ILE ASN ASN ALA ARG ASP GLY CYS VAL PRO SEQRES 10 B 199 LEU ASN ILE ILE PRO LEU THR THR ALA ALA LYS LEU MET SEQRES 11 B 199 VAL VAL ILE PRO ASP TYR ASN THR TYR LYS ASN THR CYS SEQRES 12 B 199 ASP GLY THR THR PHE THR TYR ALA SER ALA LEU TRP GLU SEQRES 13 B 199 ILE GLN GLN VAL VAL ASP ALA ASP SER LYS ILE VAL GLN SEQRES 14 B 199 LEU SER GLU ILE SER MET ASP ASN SER PRO ASN LEU ALA SEQRES 15 B 199 TRP PRO LEU ILE VAL THR ALA LEU ARG ALA ASN SER ALA SEQRES 16 B 199 VAL LYS LEU GLN SEQRES 1 C 84 MET SER LYS MET SER ASP VAL LYS CYS THR SER VAL VAL SEQRES 2 C 84 LEU LEU SER VAL LEU GLN GLN LEU ARG VAL GLU SER SER SEQRES 3 C 84 SER LYS LEU TRP ALA GLN CYS VAL GLN LEU HIS ASN ASP SEQRES 4 C 84 ILE LEU LEU ALA LYS ASP THR THR GLU ALA PHE GLU LYS SEQRES 5 C 84 MET VAL SER LEU LEU SER VAL LEU LEU SER MET GLN GLY SEQRES 6 C 84 ALA VAL ASP ILE ASN LYS LEU CYS GLU GLU MET LEU ASP SEQRES 7 C 84 ASN ARG ALA THR LEU GLN SEQRES 1 G 199 MET ALA ILE ALA SER GLU PHE SER SER LEU PRO SER TYR SEQRES 2 G 199 ALA ALA PHE ALA THR ALA GLN GLU ALA TYR GLU GLN ALA SEQRES 3 G 199 VAL ALA ASN GLY ASP SER GLU VAL VAL LEU LYS LYS LEU SEQRES 4 G 199 LYS LYS SER LEU ASN VAL ALA LYS SER GLU PHE ASP ARG SEQRES 5 G 199 ASP ALA ALA MET GLN ARG LYS LEU GLU LYS MET ALA ASP SEQRES 6 G 199 GLN ALA MET THR GLN MET TYR LYS GLN ALA ARG SER GLU SEQRES 7 G 199 ASP LYS ARG ALA LYS VAL THR SER ALA MET GLN THR MET SEQRES 8 G 199 LEU PHE THR MET LEU ARG LYS LEU ASP ASN ASP ALA LEU SEQRES 9 G 199 ASN ASN ILE ILE ASN ASN ALA ARG ASP GLY CYS VAL PRO SEQRES 10 G 199 LEU ASN ILE ILE PRO LEU THR THR ALA ALA LYS LEU MET SEQRES 11 G 199 VAL VAL ILE PRO ASP TYR ASN THR TYR LYS ASN THR CYS SEQRES 12 G 199 ASP GLY THR THR PHE THR TYR ALA SER ALA LEU TRP GLU SEQRES 13 G 199 ILE GLN GLN VAL VAL ASP ALA ASP SER LYS ILE VAL GLN SEQRES 14 G 199 LEU SER GLU ILE SER MET ASP ASN SER PRO ASN LEU ALA SEQRES 15 G 199 TRP PRO LEU ILE VAL THR ALA LEU ARG ALA ASN SER ALA SEQRES 16 G 199 VAL LYS LEU GLN SEQRES 1 A 943 MET SER ALA ASP ALA GLN SER PHE LEU ASN ARG VAL CYS SEQRES 2 A 943 GLY VAL SER ALA ALA ARG LEU THR PRO CYS GLY THR GLY SEQRES 3 A 943 THR SER THR ASP VAL VAL TYR ARG ALA PHE ASP ILE TYR SEQRES 4 A 943 ASN ASP LYS VAL ALA GLY PHE ALA LYS PHE LEU LYS THR SEQRES 5 A 943 ASN CYS CYS ARG PHE GLN GLU LYS ASP GLU ASP ASP ASN SEQRES 6 A 943 LEU ILE ASP SER TYR PHE VAL VAL LYS ARG HIS THR PHE SEQRES 7 A 943 SER ASN TYR GLN HIS GLU GLU THR ILE TYR ASN LEU LEU SEQRES 8 A 943 LYS ASP CYS PRO ALA VAL ALA LYS HIS ASP PHE PHE LYS SEQRES 9 A 943 PHE ARG ILE ASP GLY ASP MET VAL PRO HIS ILE SER ARG SEQRES 10 A 943 GLN ARG LEU THR LYS TYR THR MET ALA ASP LEU VAL TYR SEQRES 11 A 943 ALA LEU ARG HIS PHE ASP GLU GLY ASN CYS ASP THR LEU SEQRES 12 A 943 LYS GLU ILE LEU VAL THR TYR ASN CYS CYS ASP ASP ASP SEQRES 13 A 943 TYR PHE ASN LYS LYS ASP TRP TYR ASP PHE VAL GLU ASN SEQRES 14 A 943 PRO ASP ILE LEU ARG VAL TYR ALA ASN LEU GLY GLU ARG SEQRES 15 A 943 VAL ARG GLN ALA LEU LEU LYS THR VAL GLN PHE CYS ASP SEQRES 16 A 943 ALA MET ARG ASN ALA GLY ILE VAL GLY VAL LEU THR LEU SEQRES 17 A 943 ASP ASN GLN ASP LEU ASN GLY ASN TRP TYR ASP PHE GLY SEQRES 18 A 943 ASP PHE ILE GLN THR THR PRO GLY SER GLY VAL PRO VAL SEQRES 19 A 943 VAL ASP SER TYR TYR SER LEU LEU MET PRO ILE LEU THR SEQRES 20 A 943 LEU THR ARG ALA LEU THR ALA GLU SER HIS VAL ASP THR SEQRES 21 A 943 ASP LEU THR LYS PRO TYR ILE LYS TRP ASP LEU LEU LYS SEQRES 22 A 943 TYR ASP PHE THR GLU GLU ARG LEU LYS LEU PHE ASP ARG SEQRES 23 A 943 TYR PHE LYS TYR TRP ASP GLN THR TYR HIS PRO ASN CYS SEQRES 24 A 943 VAL ASN CYS LEU ASP ASP ARG CYS ILE LEU HIS CYS ALA SEQRES 25 A 943 ASN PHE ASN VAL LEU PHE SER THR VAL PHE PRO PRO THR SEQRES 26 A 943 SER PHE GLY PRO LEU VAL ARG LYS ILE PHE VAL ASP GLY SEQRES 27 A 943 VAL PRO PHE VAL VAL SER THR GLY TYR HIS PHE ARG GLU SEQRES 28 A 943 LEU GLY VAL VAL HIS ASN GLN ASP VAL ASN LEU HIS SER SEQRES 29 A 943 SER ARG LEU SER PHE LYS GLU LEU LEU VAL TYR ALA ALA SEQRES 30 A 943 ASP PRO ALA MET HIS ALA ALA SER GLY ASN LEU LEU LEU SEQRES 31 A 943 ASP LYS ARG THR THR CYS PHE SER VAL ALA ALA LEU THR SEQRES 32 A 943 ASN ASN VAL ALA PHE GLN THR VAL LYS PRO GLY ASN PHE SEQRES 33 A 943 ASN LYS ASP PHE TYR ASP PHE ALA VAL SER LYS GLY PHE SEQRES 34 A 943 PHE LYS GLU GLY SER SER VAL GLU LEU LYS HIS PHE PHE SEQRES 35 A 943 PHE ALA GLN ASP GLY ASN ALA ALA ILE SER ASP TYR ASP SEQRES 36 A 943 TYR TYR ARG TYR ASN LEU PRO THR MET CYS ASP ILE ARG SEQRES 37 A 943 GLN LEU LEU PHE VAL VAL GLU VAL VAL ASP LYS TYR PHE SEQRES 38 A 943 ASP CYS TYR ASP GLY GLY CYS ILE ASN ALA ASN GLN VAL SEQRES 39 A 943 ILE VAL ASN ASN LEU ASP LYS SER ALA GLY PHE PRO PHE SEQRES 40 A 943 ASN LYS TRP GLY LYS ALA ARG LEU TYR TYR ASP SER MET SEQRES 41 A 943 SER TYR GLU ASP GLN ASP ALA LEU PHE ALA TYR THR LYS SEQRES 42 A 943 ARG ASN VAL ILE PRO THR ILE THR GLN MET ASN LEU LYS SEQRES 43 A 943 TYR ALA ILE SER ALA LYS ASN ARG ALA ARG THR VAL ALA SEQRES 44 A 943 GLY VAL SER ILE CYS SER THR MET THR ASN ARG GLN PHE SEQRES 45 A 943 HIS GLN LYS LEU LEU LYS SER ILE ALA ALA THR ARG GLY SEQRES 46 A 943 ALA THR VAL VAL ILE GLY THR SER LYS PHE TYR GLY GLY SEQRES 47 A 943 TRP HIS ASN MET LEU LYS THR VAL TYR SER ASP VAL GLU SEQRES 48 A 943 ASN PRO HIS LEU MET GLY TRP ASP TYR PRO LYS CYS ASP SEQRES 49 A 943 ARG ALA MET PRO ASN MET LEU ARG ILE MET ALA SER LEU SEQRES 50 A 943 VAL LEU ALA ARG LYS HIS THR THR CYS CYS SER LEU SER SEQRES 51 A 943 HIS ARG PHE TYR ARG LEU ALA ASN GLU CYS ALA GLN VAL SEQRES 52 A 943 LEU SER GLU MET VAL MET CYS GLY GLY SER LEU TYR VAL SEQRES 53 A 943 LYS PRO GLY GLY THR SER SER GLY ASP ALA THR THR ALA SEQRES 54 A 943 TYR ALA ASN SER VAL PHE ASN ILE CYS GLN ALA VAL THR SEQRES 55 A 943 ALA ASN VAL ASN ALA LEU LEU SER THR ASP GLY ASN LYS SEQRES 56 A 943 ILE ALA ASP LYS TYR VAL ARG ASN LEU GLN HIS ARG LEU SEQRES 57 A 943 TYR GLU CYS LEU TYR ARG ASN ARG ASP VAL ASP THR ASP SEQRES 58 A 943 PHE VAL ASN GLU PHE TYR ALA TYR LEU ARG LYS HIS PHE SEQRES 59 A 943 SER MET MET ILE LEU SER ASP ASP ALA VAL VAL CYS PHE SEQRES 60 A 943 ASN SER THR TYR ALA SER GLN GLY LEU VAL ALA SER ILE SEQRES 61 A 943 LYS ASN PHE LYS SER VAL LEU TYR TYR GLN ASN ASN VAL SEQRES 62 A 943 PHE MET SER GLU ALA LYS CYS TRP THR GLU THR ASP LEU SEQRES 63 A 943 THR LYS GLY PRO HIS GLU PHE CYS SER GLN HIS THR MET SEQRES 64 A 943 LEU VAL LYS GLN GLY ASP ASP TYR VAL TYR LEU PRO TYR SEQRES 65 A 943 PRO ASP PRO SER ARG ILE LEU GLY ALA GLY CYS PHE VAL SEQRES 66 A 943 ASP ASP ILE VAL LYS THR ASP GLY THR LEU MET ILE GLU SEQRES 67 A 943 ARG PHE VAL SER LEU ALA ILE ASP ALA TYR PRO LEU THR SEQRES 68 A 943 LYS HIS PRO ASN GLN GLU TYR ALA ASP VAL PHE HIS LEU SEQRES 69 A 943 TYR LEU GLN TYR ILE ARG LYS LEU HIS ASP GLU LEU THR SEQRES 70 A 943 GLY HIS MET LEU ASP MET TYR SER VAL MET LEU THR ASN SEQRES 71 A 943 ASP ASN THR SER ARG TYR TRP GLU PRO GLU PHE TYR GLU SEQRES 72 A 943 ALA MET TYR THR PRO HIS THR VAL LEU GLN GLY GLY SER SEQRES 73 A 943 GLU ASN LEU TYR PHE GLN GLY HET ZN A1001 1 HET ZN A1002 1 HET H3U A1003 42 HET H3U A1004 42 HETNAM ZN ZINC ION HETNAM H3U 8-(3-(3-AMINOBENZAMIDO)-4-METHYLBENZAMIDO)NAPHTHALENE- HETNAM 2 H3U 1,3,5-TRISULFONIC ACID FORMUL 5 ZN 2(ZN 2+) FORMUL 7 H3U 2(C25 H21 N3 O11 S3) HELIX 1 AA1 LYS B 79 LEU B 98 1 20 HELIX 2 AA2 ASP B 101 ASN B 109 1 9 HELIX 3 AA3 ILE B 119 ALA B 125 1 7 HELIX 4 AA4 ASP B 134 CYS B 142 1 9 HELIX 5 AA5 GLN B 168 ILE B 172 5 5 HELIX 6 AA6 MET C 3 LEU C 20 1 18 HELIX 7 AA7 ARG C 21 SER C 24 5 4 HELIX 8 AA8 SER C 25 LEU C 41 1 17 HELIX 9 AA9 ASP C 44 LEU C 60 1 17 HELIX 10 AB1 SER G 85 ASP G 99 1 15 HELIX 11 AB2 ASN G 100 ASP G 112 1 13 HELIX 12 AB3 ASP G 134 THR G 141 1 8 HELIX 13 AB4 PHE A 7 SER A 15 1 9 HELIX 14 AB5 THR A 76 LYS A 91 1 16 HELIX 15 AB6 THR A 123 HIS A 133 1 11 HELIX 16 AB7 CYS A 139 TYR A 149 1 11 HELIX 17 AB8 ASP A 153 LYS A 159 5 7 HELIX 18 AB9 ASP A 170 ASN A 177 1 8 HELIX 19 AC1 LEU A 178 GLY A 200 1 23 HELIX 20 AC2 THR A 206 GLN A 210 5 5 HELIX 21 AC3 VAL A 234 THR A 248 1 15 HELIX 22 AC4 THR A 252 ASP A 260 5 9 HELIX 23 AC5 PHE A 275 PHE A 287 1 13 HELIX 24 AC6 ASN A 297 CYS A 301 5 5 HELIX 25 AC7 ASP A 303 SER A 318 1 16 HELIX 26 AC8 PRO A 322 PHE A 326 5 5 HELIX 27 AC9 SER A 367 ASP A 377 1 11 HELIX 28 AD1 ASP A 377 SER A 384 1 8 HELIX 29 AD2 ASN A 416 LYS A 426 1 11 HELIX 30 AD3 ASN A 447 ASP A 454 1 8 HELIX 31 AD4 TYR A 455 ASN A 459 5 5 HELIX 32 AD5 ASP A 465 ASP A 477 1 13 HELIX 33 AD6 LYS A 478 ASP A 481 5 4 HELIX 34 AD7 ASN A 489 VAL A 493 5 5 HELIX 35 AD8 PHE A 504 TRP A 509 5 6 HELIX 36 AD9 LYS A 511 MET A 519 1 9 HELIX 37 AE1 SER A 520 THR A 531 1 12 HELIX 38 AE2 SER A 561 ALA A 580 1 20 HELIX 39 AE3 GLY A 596 TYR A 606 1 11 HELIX 40 AE4 LYS A 621 MET A 626 1 6 HELIX 41 AE5 PRO A 627 ARG A 640 1 14 HELIX 42 AE6 SER A 647 LEU A 663 1 17 HELIX 43 AE7 THR A 686 SER A 709 1 24 HELIX 44 AE8 ASP A 711 ILE A 715 5 5 HELIX 45 AE9 ASP A 717 ARG A 733 1 17 HELIX 46 AF1 ASP A 738 HIS A 752 1 15 HELIX 47 AF2 SER A 768 GLN A 773 1 6 HELIX 48 AF3 SER A 778 ASN A 791 1 14 HELIX 49 AF4 ASP A 833 CYS A 842 1 10 HELIX 50 AF5 ASP A 845 ASP A 851 1 7 HELIX 51 AF6 ASP A 851 TYR A 867 1 17 HELIX 52 AF7 PRO A 868 HIS A 872 5 5 HELIX 53 AF8 ASN A 874 GLU A 894 1 21 HELIX 54 AF9 GLU A 917 ALA A 923 1 7 HELIX 55 AG1 MET A 924 THR A 926 5 3 SHEET 1 AA1 4 CYS B 114 PRO B 116 0 SHEET 2 AA1 4 GLY A 327 VAL A 335 -1 O VAL A 330 N VAL B 115 SHEET 3 AA1 4 VAL A 338 PHE A 348 -1 O PHE A 340 N ILE A 333 SHEET 4 AA1 4 GLY A 352 HIS A 355 -1 O GLY A 352 N PHE A 348 SHEET 1 AA2 3 CYS B 114 PRO B 116 0 SHEET 2 AA2 3 GLY A 327 VAL A 335 -1 O VAL A 330 N VAL B 115 SHEET 3 AA2 3 HIS A 362 SER A 363 1 O SER A 363 N PHE A 334 SHEET 1 AA310 THR B 146 THR B 148 0 SHEET 2 AA310 LEU B 153 VAL B 160 -1 O TRP B 154 N PHE B 147 SHEET 3 AA310 LEU B 184 ARG B 190 -1 O THR B 187 N GLN B 158 SHEET 4 AA310 LYS B 127 ILE B 132 -1 N VAL B 130 O VAL B 186 SHEET 5 AA310 ASN A 386 ASP A 390 1 O LEU A 389 N MET B 129 SHEET 6 AA310 SER A 397 ALA A 400 -1 O ALA A 400 N ASN A 386 SHEET 7 AA310 SER A 672 VAL A 675 -1 O LEU A 673 N VAL A 398 SHEET 8 AA310 MET A 666 MET A 668 -1 N VAL A 667 O TYR A 674 SHEET 9 AA310 ILE A 539 LYS A 545 1 N THR A 540 O MET A 668 SHEET 10 AA310 ARG A 555 GLY A 559 -1 O ARG A 555 N LYS A 545 SHEET 1 AA4 5 LEU G 128 ILE G 132 0 SHEET 2 AA4 5 LEU G 184 ARG G 190 -1 O VAL G 186 N VAL G 130 SHEET 3 AA4 5 ALA G 152 VAL G 160 -1 N GLN G 157 O THR G 187 SHEET 4 AA4 5 THR G 146 TYR G 149 -1 N PHE G 147 O TRP G 154 SHEET 5 AA4 5 CYS G 142 ASP G 143 -1 N ASP G 143 O THR G 146 SHEET 1 AA5 4 LEU G 128 ILE G 132 0 SHEET 2 AA5 4 LEU G 184 ARG G 190 -1 O VAL G 186 N VAL G 130 SHEET 3 AA5 4 ALA G 152 VAL G 160 -1 N GLN G 157 O THR G 187 SHEET 4 AA5 4 ILE G 166 VAL G 167 -1 O VAL G 167 N VAL G 159 SHEET 1 AA6 5 LEU A 19 PRO A 21 0 SHEET 2 AA6 5 CYS A 54 LYS A 59 -1 O GLN A 57 N THR A 20 SHEET 3 AA6 5 LEU A 65 ARG A 74 -1 O VAL A 72 N CYS A 54 SHEET 4 AA6 5 VAL A 111 LEU A 119 -1 O ARG A 116 N VAL A 71 SHEET 5 AA6 5 HIS A 99 PHE A 104 -1 N PHE A 102 O HIS A 113 SHEET 1 AA7 2 TYR A 32 TYR A 38 0 SHEET 2 AA7 2 ALA A 43 LEU A 49 -1 O GLY A 44 N ILE A 37 SHEET 1 AA8 3 ILE A 223 GLN A 224 0 SHEET 2 AA8 3 ILE A 201 VAL A 204 -1 N VAL A 202 O ILE A 223 SHEET 3 AA8 3 PRO A 232 VAL A 233 1 O VAL A 233 N GLY A 203 SHEET 1 AA9 2 ASN A 414 PHE A 415 0 SHEET 2 AA9 2 PHE A 843 VAL A 844 -1 O VAL A 844 N ASN A 414 SHEET 1 AB1 4 PHE A 753 LEU A 758 0 SHEET 2 AB1 4 ASP A 761 ASN A 767 -1 O CYS A 765 N SER A 754 SHEET 3 AB1 4 PRO A 612 GLY A 616 -1 N MET A 615 O VAL A 764 SHEET 4 AB1 4 TRP A 800 GLU A 802 -1 O GLU A 802 N LEU A 614 SHEET 1 AB2 2 HIS A 816 GLN A 822 0 SHEET 2 AB2 2 ASP A 825 TYR A 831 -1 O TYR A 831 N HIS A 816 LINK ND1 HIS A 295 ZN ZN A1001 1555 1555 2.31 LINK SG CYS A 301 ZN ZN A1001 1555 1555 2.41 LINK SG CYS A 306 ZN ZN A1001 1555 1555 2.41 LINK SG CYS A 310 ZN ZN A1001 1555 1555 2.38 LINK SG CYS A 487 ZN ZN A1002 1555 1555 2.42 LINK SG CYS A 645 ZN ZN A1002 1555 1555 2.39 LINK SG CYS A 646 ZN ZN A1002 1555 1555 2.41 CISPEP 1 TRP B 182 PRO B 183 0 6.28 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000