HEADER OXIDOREDUCTASE 13-OCT-20 7D9J TITLE SPDH SPERMIDINE DEHYDROGENASE Y443A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPERMIDINE DEHYDROGENASE, SPDH; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.5.99.6; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 GENE: SPDH, PA3713; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SPDH, SPERMIDINE DEHYDROGENASE, HEME-CONTAINING MONOAMINE OXIDASE, KEYWDS 2 PSEUDOMONAS AERUGINOSA PAO1., OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.CHE,Q.ZHANG,M.BARTLAM REVDAT 3 29-NOV-23 7D9J 1 REMARK REVDAT 2 20-APR-22 7D9J 1 JRNL REVDAT 1 17-NOV-21 7D9J 0 JRNL AUTH S.CHE,Y.LIANG,Y.CHEN,W.WU,R.LIU,Q.ZHANG,M.BARTLAM JRNL TITL STRUCTURE OF PSEUDOMONAS AERUGINOSA SPERMIDINE JRNL TITL 2 DEHYDROGENASE: A POLYAMINE OXIDASE WITH A NOVEL HEME-BINDING JRNL TITL 3 FOLD. JRNL REF FEBS J. V. 289 1911 2022 JRNL REFN ISSN 1742-464X JRNL PMID 34741591 JRNL DOI 10.1111/FEBS.16264 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 59151 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.9600 - 6.0400 0.99 2785 123 0.1446 0.1765 REMARK 3 2 6.0400 - 4.8000 1.00 2724 151 0.1308 0.1623 REMARK 3 3 4.8000 - 4.1900 1.00 2700 152 0.1121 0.1407 REMARK 3 4 4.1900 - 3.8100 1.00 2694 163 0.1252 0.1811 REMARK 3 5 3.8100 - 3.5400 1.00 2680 155 0.1404 0.1888 REMARK 3 6 3.5400 - 3.3300 0.99 2691 140 0.1551 0.2116 REMARK 3 7 3.3300 - 3.1600 1.00 2693 126 0.1595 0.2358 REMARK 3 8 3.1600 - 3.0200 0.99 2713 144 0.1632 0.2308 REMARK 3 9 3.0200 - 2.9100 1.00 2697 129 0.1613 0.1956 REMARK 3 10 2.9100 - 2.8100 1.00 2713 127 0.1589 0.2442 REMARK 3 11 2.8100 - 2.7200 0.99 2699 139 0.1557 0.2253 REMARK 3 12 2.7200 - 2.6400 0.99 2665 128 0.1563 0.2226 REMARK 3 13 2.6400 - 2.5700 0.99 2696 142 0.1509 0.2385 REMARK 3 14 2.5700 - 2.5100 0.99 2659 125 0.1575 0.2211 REMARK 3 15 2.5100 - 2.4500 0.99 2696 129 0.1567 0.2621 REMARK 3 16 2.4500 - 2.4000 0.99 2654 143 0.1611 0.2194 REMARK 3 17 2.4000 - 2.3500 0.99 2697 135 0.1594 0.2466 REMARK 3 18 2.3500 - 2.3100 0.99 2649 135 0.1594 0.2480 REMARK 3 19 2.3100 - 2.2700 0.99 2646 154 0.1580 0.2244 REMARK 3 20 2.2700 - 2.2300 0.99 2646 142 0.1667 0.2513 REMARK 3 21 2.2300 - 2.1900 0.91 2435 137 0.1830 0.3217 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.211 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.284 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 9610 REMARK 3 ANGLE : 0.906 13073 REMARK 3 CHIRALITY : 0.052 1349 REMARK 3 PLANARITY : 0.006 1702 REMARK 3 DIHEDRAL : 18.679 3482 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7D9J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1300018997. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97737 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59220 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7D9F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS TRIS PH6.5, 20% W/V REMARK 280 POLYETHYLENE GLYCOL (PEG) 3350, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.75050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ILE A 3 REMARK 465 SER A 4 REMARK 465 ARG A 5 REMARK 465 ARG A 6 REMARK 465 ASP A 7 REMARK 465 PHE A 8 REMARK 465 LEU A 9 REMARK 465 ASN A 10 REMARK 465 GLY A 11 REMARK 465 VAL A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 THR A 15 REMARK 465 ILE A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 GLY A 19 REMARK 465 LEU A 20 REMARK 465 THR A 21 REMARK 465 PRO A 22 REMARK 465 ALA A 23 REMARK 465 GLU A 24 REMARK 465 ILE A 25 REMARK 465 LEU A 26 REMARK 465 ARG A 27 REMARK 465 ALA A 28 REMARK 465 ALA A 29 REMARK 465 PRO A 30 REMARK 465 GLY A 31 REMARK 465 GLY A 32 REMARK 465 ARG A 33 REMARK 465 PRO A 312 REMARK 465 SER A 313 REMARK 465 GLU A 314 REMARK 465 GLU A 315 REMARK 465 ALA A 316 REMARK 465 GLN A 317 REMARK 465 ALA A 318 REMARK 465 GLU A 319 REMARK 465 MET A 320 REMARK 465 GLY A 620 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ILE B 3 REMARK 465 SER B 4 REMARK 465 ARG B 5 REMARK 465 ARG B 6 REMARK 465 ASP B 7 REMARK 465 PHE B 8 REMARK 465 LEU B 9 REMARK 465 ASN B 10 REMARK 465 GLY B 11 REMARK 465 VAL B 12 REMARK 465 ALA B 13 REMARK 465 LEU B 14 REMARK 465 THR B 15 REMARK 465 ILE B 16 REMARK 465 ALA B 17 REMARK 465 ALA B 18 REMARK 465 GLY B 19 REMARK 465 LEU B 20 REMARK 465 THR B 21 REMARK 465 PRO B 22 REMARK 465 ALA B 23 REMARK 465 GLU B 24 REMARK 465 ILE B 25 REMARK 465 LEU B 26 REMARK 465 ARG B 27 REMARK 465 ALA B 28 REMARK 465 ALA B 29 REMARK 465 PRO B 30 REMARK 465 GLY B 31 REMARK 465 GLY B 32 REMARK 465 ARG B 33 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1299 O HOH A 1319 2.02 REMARK 500 O HOH B 1206 O HOH B 1251 2.04 REMARK 500 O HOH A 1253 O HOH A 1254 2.12 REMARK 500 NE ARG B 385 O HOH B 801 2.13 REMARK 500 O GLN A 311 O HOH A 801 2.17 REMARK 500 O HOH A 1128 O HOH A 1290 2.17 REMARK 500 O HOH B 1280 O HOH B 1351 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 40 -167.58 -117.79 REMARK 500 ARG A 43 -149.11 -121.14 REMARK 500 SER A 137 59.22 34.72 REMARK 500 ASN A 332 0.63 -69.15 REMARK 500 TRP A 560 69.75 -100.89 REMARK 500 SER A 565 150.36 -39.38 REMARK 500 ALA A 595 -136.62 -124.30 REMARK 500 ASN A 596 149.42 76.26 REMARK 500 TYR B 35 88.33 -156.07 REMARK 500 THR B 40 -162.86 -108.32 REMARK 500 ARG B 43 -152.38 -124.28 REMARK 500 GLU B 133 -62.85 -90.23 REMARK 500 SER B 137 57.73 36.71 REMARK 500 ARG B 487 -32.44 -133.25 REMARK 500 ALA B 595 -132.54 -127.52 REMARK 500 ASN B 596 150.71 72.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 702 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 54 NE2 REMARK 620 2 HEM A 702 NA 92.0 REMARK 620 3 HEM A 702 NB 85.3 85.5 REMARK 620 4 HEM A 702 NC 89.6 176.3 91.3 REMARK 620 5 HEM A 702 ND 99.4 88.0 172.1 95.0 REMARK 620 6 HIS A 562 NE2 177.9 87.3 96.7 91.2 78.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 702 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 54 NE2 REMARK 620 2 HEM B 702 NA 89.2 REMARK 620 3 HEM B 702 NB 83.6 88.7 REMARK 620 4 HEM B 702 NC 90.6 179.7 91.2 REMARK 620 5 HEM B 702 ND 99.5 89.4 176.3 90.8 REMARK 620 6 HIS B 562 NE2 178.0 92.7 97.1 87.6 79.8 REMARK 620 N 1 2 3 4 5 DBREF 7D9J A 1 620 UNP Q9HXS8 Q9HXS8_PSEAE 1 620 DBREF 7D9J B 1 620 UNP Q9HXS8 Q9HXS8_PSEAE 1 620 SEQADV 7D9J ALA A 443 UNP Q9HXS8 TYR 443 ENGINEERED MUTATION SEQADV 7D9J ALA B 443 UNP Q9HXS8 TYR 443 ENGINEERED MUTATION SEQRES 1 A 620 MET THR ILE SER ARG ARG ASP PHE LEU ASN GLY VAL ALA SEQRES 2 A 620 LEU THR ILE ALA ALA GLY LEU THR PRO ALA GLU ILE LEU SEQRES 3 A 620 ARG ALA ALA PRO GLY GLY ARG TYR TYR PRO PRO ALA LEU SEQRES 4 A 620 THR GLY LEU ARG GLY SER HIS PRO GLY ALA PHE GLU VAL SEQRES 5 A 620 ALA HIS GLN MET GLY TRP GLU LYS LYS THR PHE ASP VAL SEQRES 6 A 620 ASP HIS LEU PRO ILE GLU GLU GLU TYR ASP LEU VAL VAL SEQRES 7 A 620 VAL GLY GLY GLY ILE SER GLY LEU ALA ALA ALA TRP PHE SEQRES 8 A 620 TYR ARG GLU ARG HIS PRO ALA ALA ARG ILE LEU VAL ILE SEQRES 9 A 620 GLU ASN HIS ASP ASP PHE GLY GLY HIS ALA LYS ARG ASN SEQRES 10 A 620 GLU PHE GLN ALA GLY GLY ARG THR ILE LEU GLY TYR GLY SEQRES 11 A 620 GLY SER GLU SER LEU GLN SER PRO ASN ALA LEU TYR SER SEQRES 12 A 620 GLU ASP ALA LYS HIS LEU LEU LYS ARG LEU GLY VAL GLU SEQRES 13 A 620 LEU LYS ARG PHE GLU THR ALA PHE ASP THR ASP PHE TYR SEQRES 14 A 620 PRO GLY LEU GLY LEU SER ARG ALA VAL PHE PHE ASP LYS SEQRES 15 A 620 ALA SER PHE GLY VAL ASP LYS LEU VAL SER GLY ASP PRO SEQRES 16 A 620 THR PRO MET VAL ALA ASP GLU VAL PRO ARG ASP ARG LEU SEQRES 17 A 620 ASN ALA ARG SER TRP ARG ALA PHE ILE GLY ASP PHE PRO SEQRES 18 A 620 LEU SER ARG GLU ASP ARG GLU ALA LEU ILE ALA LEU TYR SEQRES 19 A 620 GLU SER PRO ARG ASP TYR LEU ALA GLY LYS SER VAL GLU SEQRES 20 A 620 GLU LYS GLU THR TYR LEU ALA LYS THR SER TYR ARG ASP SEQRES 21 A 620 TYR LEU LEU LYS ASN VAL GLY LEU SER GLU THR SER VAL SEQRES 22 A 620 LYS TYR PHE GLN GLY ARG SER ASN ASP PHE SER ALA LEU SEQRES 23 A 620 GLY ALA ASP ALA LEU PRO ALA ALA ASP ALA TYR ALA ALA SEQRES 24 A 620 GLY PHE PRO GLY PHE ASP ALA LEU GLY LEU PRO GLN PRO SEQRES 25 A 620 SER GLU GLU ALA GLN ALA GLU MET ASP GLU PRO TYR ILE SEQRES 26 A 620 TYR HIS PHE PRO ASP GLY ASN ALA SER LEU ALA ARG LEU SEQRES 27 A 620 MET VAL ARG ASP LEU ILE PRO ALA VAL ALA PRO GLY ARG SEQRES 28 A 620 GLY MET GLU ASP ILE VAL MET ALA ARG PHE ASP TYR SER SEQRES 29 A 620 LYS LEU ASP LEU ALA GLY HIS PRO VAL ARG LEU ARG LEU SEQRES 30 A 620 ASN SER THR ALA VAL SER VAL ARG ASN ARG ALA GLY GLY SEQRES 31 A 620 VAL ASP VAL GLY TYR SER ARG ALA GLY ARG LEU HIS ARG SEQRES 32 A 620 VAL ARG GLY LYS HIS CYS VAL MET ALA CYS TYR ASN MET SEQRES 33 A 620 MET VAL PRO TYR LEU LEU ARG ASP LEU SER GLU GLU GLN SEQRES 34 A 620 ALA HIS ALA LEU SER GLN ASN VAL LYS PHE PRO LEU VAL SEQRES 35 A 620 ALA THR LYS VAL LEU LEU ARG ASN TRP GLN ALA TRP LYS SEQRES 36 A 620 THR LEU GLY ILE HIS GLU ILE TYR ALA PRO THR LEU PRO SEQRES 37 A 620 TYR SER ARG ILE LYS LEU ASP PHE PRO VAL ASP LEU GLY SEQRES 38 A 620 SER TYR ARG HIS PRO ARG ASP PRO ARG GLN PRO ILE GLY SEQRES 39 A 620 VAL HIS MET VAL TYR VAL PRO THR THR PRO ASN ALA GLY SEQRES 40 A 620 MET ASP ALA ARG THR GLN ALA ARG VAL GLY ARG SER LYS SEQRES 41 A 620 LEU TYR ALA MET SER PHE GLU GLN LEU GLU LYS ASP ILE SEQRES 42 A 620 ARG ASP GLN LEU GLN ALA MET LEU GLY PRO ALA GLY PHE SEQRES 43 A 620 ASP HIS ARG ARG ASP ILE THR GLY ILE THR VAL ASN ARG SEQRES 44 A 620 TRP SER HIS GLY TYR SER TYR PHE MET ASN THR LEU TYR SEQRES 45 A 620 ASP ASP GLU ALA GLU SER GLU ALA LEU MET GLU LEU ALA SEQRES 46 A 620 ARG SER LYS VAL GLY ASN VAL ALA ILE ALA ASN SER ASP SEQRES 47 A 620 ALA ALA TRP ASP ALA TYR ALA HIS ALA ALA ILE ASP GLN SEQRES 48 A 620 ALA VAL ARG ALA VAL ARG GLU LEU GLY SEQRES 1 B 620 MET THR ILE SER ARG ARG ASP PHE LEU ASN GLY VAL ALA SEQRES 2 B 620 LEU THR ILE ALA ALA GLY LEU THR PRO ALA GLU ILE LEU SEQRES 3 B 620 ARG ALA ALA PRO GLY GLY ARG TYR TYR PRO PRO ALA LEU SEQRES 4 B 620 THR GLY LEU ARG GLY SER HIS PRO GLY ALA PHE GLU VAL SEQRES 5 B 620 ALA HIS GLN MET GLY TRP GLU LYS LYS THR PHE ASP VAL SEQRES 6 B 620 ASP HIS LEU PRO ILE GLU GLU GLU TYR ASP LEU VAL VAL SEQRES 7 B 620 VAL GLY GLY GLY ILE SER GLY LEU ALA ALA ALA TRP PHE SEQRES 8 B 620 TYR ARG GLU ARG HIS PRO ALA ALA ARG ILE LEU VAL ILE SEQRES 9 B 620 GLU ASN HIS ASP ASP PHE GLY GLY HIS ALA LYS ARG ASN SEQRES 10 B 620 GLU PHE GLN ALA GLY GLY ARG THR ILE LEU GLY TYR GLY SEQRES 11 B 620 GLY SER GLU SER LEU GLN SER PRO ASN ALA LEU TYR SER SEQRES 12 B 620 GLU ASP ALA LYS HIS LEU LEU LYS ARG LEU GLY VAL GLU SEQRES 13 B 620 LEU LYS ARG PHE GLU THR ALA PHE ASP THR ASP PHE TYR SEQRES 14 B 620 PRO GLY LEU GLY LEU SER ARG ALA VAL PHE PHE ASP LYS SEQRES 15 B 620 ALA SER PHE GLY VAL ASP LYS LEU VAL SER GLY ASP PRO SEQRES 16 B 620 THR PRO MET VAL ALA ASP GLU VAL PRO ARG ASP ARG LEU SEQRES 17 B 620 ASN ALA ARG SER TRP ARG ALA PHE ILE GLY ASP PHE PRO SEQRES 18 B 620 LEU SER ARG GLU ASP ARG GLU ALA LEU ILE ALA LEU TYR SEQRES 19 B 620 GLU SER PRO ARG ASP TYR LEU ALA GLY LYS SER VAL GLU SEQRES 20 B 620 GLU LYS GLU THR TYR LEU ALA LYS THR SER TYR ARG ASP SEQRES 21 B 620 TYR LEU LEU LYS ASN VAL GLY LEU SER GLU THR SER VAL SEQRES 22 B 620 LYS TYR PHE GLN GLY ARG SER ASN ASP PHE SER ALA LEU SEQRES 23 B 620 GLY ALA ASP ALA LEU PRO ALA ALA ASP ALA TYR ALA ALA SEQRES 24 B 620 GLY PHE PRO GLY PHE ASP ALA LEU GLY LEU PRO GLN PRO SEQRES 25 B 620 SER GLU GLU ALA GLN ALA GLU MET ASP GLU PRO TYR ILE SEQRES 26 B 620 TYR HIS PHE PRO ASP GLY ASN ALA SER LEU ALA ARG LEU SEQRES 27 B 620 MET VAL ARG ASP LEU ILE PRO ALA VAL ALA PRO GLY ARG SEQRES 28 B 620 GLY MET GLU ASP ILE VAL MET ALA ARG PHE ASP TYR SER SEQRES 29 B 620 LYS LEU ASP LEU ALA GLY HIS PRO VAL ARG LEU ARG LEU SEQRES 30 B 620 ASN SER THR ALA VAL SER VAL ARG ASN ARG ALA GLY GLY SEQRES 31 B 620 VAL ASP VAL GLY TYR SER ARG ALA GLY ARG LEU HIS ARG SEQRES 32 B 620 VAL ARG GLY LYS HIS CYS VAL MET ALA CYS TYR ASN MET SEQRES 33 B 620 MET VAL PRO TYR LEU LEU ARG ASP LEU SER GLU GLU GLN SEQRES 34 B 620 ALA HIS ALA LEU SER GLN ASN VAL LYS PHE PRO LEU VAL SEQRES 35 B 620 ALA THR LYS VAL LEU LEU ARG ASN TRP GLN ALA TRP LYS SEQRES 36 B 620 THR LEU GLY ILE HIS GLU ILE TYR ALA PRO THR LEU PRO SEQRES 37 B 620 TYR SER ARG ILE LYS LEU ASP PHE PRO VAL ASP LEU GLY SEQRES 38 B 620 SER TYR ARG HIS PRO ARG ASP PRO ARG GLN PRO ILE GLY SEQRES 39 B 620 VAL HIS MET VAL TYR VAL PRO THR THR PRO ASN ALA GLY SEQRES 40 B 620 MET ASP ALA ARG THR GLN ALA ARG VAL GLY ARG SER LYS SEQRES 41 B 620 LEU TYR ALA MET SER PHE GLU GLN LEU GLU LYS ASP ILE SEQRES 42 B 620 ARG ASP GLN LEU GLN ALA MET LEU GLY PRO ALA GLY PHE SEQRES 43 B 620 ASP HIS ARG ARG ASP ILE THR GLY ILE THR VAL ASN ARG SEQRES 44 B 620 TRP SER HIS GLY TYR SER TYR PHE MET ASN THR LEU TYR SEQRES 45 B 620 ASP ASP GLU ALA GLU SER GLU ALA LEU MET GLU LEU ALA SEQRES 46 B 620 ARG SER LYS VAL GLY ASN VAL ALA ILE ALA ASN SER ASP SEQRES 47 B 620 ALA ALA TRP ASP ALA TYR ALA HIS ALA ALA ILE ASP GLN SEQRES 48 B 620 ALA VAL ARG ALA VAL ARG GLU LEU GLY HET FAD A 701 53 HET HEM A 702 43 HET GOL A 703 6 HET FAD B 701 53 HET HEM B 702 43 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM GOL GLYCEROL HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 HEM 2(C34 H32 FE N4 O4) FORMUL 5 GOL C3 H8 O3 FORMUL 8 HOH *1078(H2 O) HELIX 1 AA1 TYR A 35 LEU A 39 5 5 HELIX 2 AA2 PHE A 50 TRP A 58 1 9 HELIX 3 AA3 GLY A 82 HIS A 96 1 15 HELIX 4 AA4 SER A 137 TYR A 142 1 6 HELIX 5 AA5 SER A 143 LEU A 153 1 11 HELIX 6 AA6 GLU A 156 LYS A 158 5 3 HELIX 7 AA7 ARG A 159 PHE A 164 1 6 HELIX 8 AA8 ASP A 167 LEU A 172 1 6 HELIX 9 AA9 ASP A 181 GLY A 186 1 6 HELIX 10 AB1 PRO A 204 LEU A 208 5 5 HELIX 11 AB2 SER A 212 ASP A 219 1 8 HELIX 12 AB3 SER A 223 SER A 236 1 14 HELIX 13 AB4 SER A 245 THR A 256 1 12 HELIX 14 AB5 SER A 257 ASN A 265 1 9 HELIX 15 AB6 SER A 269 LYS A 274 1 6 HELIX 16 AB7 TYR A 275 GLN A 277 5 3 HELIX 17 AB8 SER A 280 ALA A 285 1 6 HELIX 18 AB9 PRO A 292 ALA A 299 1 8 HELIX 19 AC1 ASN A 332 ILE A 344 1 13 HELIX 20 AC2 PRO A 345 ALA A 348 5 4 HELIX 21 AC3 ASP A 362 LEU A 366 5 5 HELIX 22 AC4 TYR A 414 MET A 416 5 3 HELIX 23 AC5 MET A 417 LEU A 422 1 6 HELIX 24 AC6 SER A 426 GLN A 435 1 10 HELIX 25 AC7 TRP A 451 GLY A 458 1 8 HELIX 26 AC8 ASP A 509 ALA A 523 1 15 HELIX 27 AC9 SER A 525 GLY A 542 1 18 HELIX 28 AD1 PRO A 543 GLY A 545 5 3 HELIX 29 AD2 ASP A 547 ASP A 551 1 5 HELIX 30 AD3 ASP A 574 ARG A 586 1 13 HELIX 31 AD4 ASN A 596 TRP A 601 5 6 HELIX 32 AD5 TYR A 604 LEU A 619 1 16 HELIX 33 AD6 TYR B 35 LEU B 39 5 5 HELIX 34 AD7 PHE B 50 TRP B 58 1 9 HELIX 35 AD8 GLY B 82 HIS B 96 1 15 HELIX 36 AD9 SER B 137 TYR B 142 1 6 HELIX 37 AE1 SER B 143 LEU B 153 1 11 HELIX 38 AE2 GLU B 156 LYS B 158 5 3 HELIX 39 AE3 ARG B 159 PHE B 164 1 6 HELIX 40 AE4 ASP B 167 LEU B 172 1 6 HELIX 41 AE5 ASP B 181 GLY B 186 1 6 HELIX 42 AE6 PRO B 204 LEU B 208 5 5 HELIX 43 AE7 SER B 212 ASP B 219 1 8 HELIX 44 AE8 SER B 223 SER B 236 1 14 HELIX 45 AE9 SER B 245 THR B 256 1 12 HELIX 46 AF1 SER B 257 ASN B 265 1 9 HELIX 47 AF2 SER B 269 TYR B 275 1 7 HELIX 48 AF3 SER B 280 ALA B 285 1 6 HELIX 49 AF4 GLY B 287 LEU B 291 5 5 HELIX 50 AF5 PRO B 292 ALA B 299 1 8 HELIX 51 AF6 SER B 313 GLU B 322 1 10 HELIX 52 AF7 ASN B 332 ILE B 344 1 13 HELIX 53 AF8 PRO B 345 ALA B 348 5 4 HELIX 54 AF9 ASP B 362 LEU B 366 5 5 HELIX 55 AG1 TYR B 414 MET B 416 5 3 HELIX 56 AG2 MET B 417 LEU B 422 1 6 HELIX 57 AG3 SER B 426 GLN B 435 1 10 HELIX 58 AG4 TRP B 451 GLY B 458 1 8 HELIX 59 AG5 ASP B 509 ALA B 523 1 15 HELIX 60 AG6 SER B 525 GLY B 542 1 18 HELIX 61 AG7 PRO B 543 GLY B 545 5 3 HELIX 62 AG8 ASP B 547 ASP B 551 1 5 HELIX 63 AG9 ASP B 574 ARG B 586 1 13 HELIX 64 AH1 ASN B 596 TRP B 601 5 6 HELIX 65 AH2 TYR B 604 GLU B 618 1 15 SHEET 1 AA1 8 GLY A 41 GLY A 44 0 SHEET 2 AA1 8 ILE A 552 TYR A 564 1 O VAL A 557 N ARG A 43 SHEET 3 AA1 8 PHE A 439 LEU A 448 -1 N LYS A 445 O THR A 556 SHEET 4 AA1 8 ILE A 493 TYR A 499 -1 O MET A 497 N THR A 444 SHEET 5 AA1 8 TYR A 469 LEU A 474 -1 N LYS A 473 O HIS A 496 SHEET 6 AA1 8 ILE A 459 TYR A 463 -1 N ILE A 462 O ILE A 472 SHEET 7 AA1 8 SER A 175 PHE A 180 1 N PHE A 179 O TYR A 463 SHEET 8 AA1 8 LYS A 189 SER A 192 -1 O LYS A 189 N PHE A 180 SHEET 1 AA2 6 VAL A 373 ARG A 376 0 SHEET 2 AA2 6 ILE A 101 ILE A 104 1 N VAL A 103 O ARG A 376 SHEET 3 AA2 6 GLU A 73 VAL A 79 1 N VAL A 78 O LEU A 102 SHEET 4 AA2 6 ARG A 400 MET A 411 1 O HIS A 408 N ASP A 75 SHEET 5 AA2 6 GLY A 390 ARG A 397 -1 N VAL A 391 O GLY A 406 SHEET 6 AA2 6 SER A 379 ARG A 387 -1 N THR A 380 O SER A 396 SHEET 1 AA3 5 VAL A 373 ARG A 376 0 SHEET 2 AA3 5 ILE A 101 ILE A 104 1 N VAL A 103 O ARG A 376 SHEET 3 AA3 5 GLU A 73 VAL A 79 1 N VAL A 78 O LEU A 102 SHEET 4 AA3 5 ARG A 400 MET A 411 1 O HIS A 408 N ASP A 75 SHEET 5 AA3 5 VAL A 592 ILE A 594 1 O ALA A 593 N MET A 411 SHEET 1 AA4 2 ARG A 116 ALA A 121 0 SHEET 2 AA4 2 ARG A 124 TYR A 129 -1 O GLY A 128 N ASN A 117 SHEET 1 AA5 8 GLY B 41 GLY B 44 0 SHEET 2 AA5 8 ILE B 552 TRP B 560 1 O VAL B 557 N ARG B 43 SHEET 3 AA5 8 LEU B 441 LEU B 448 -1 N LYS B 445 O THR B 556 SHEET 4 AA5 8 ILE B 493 TYR B 499 -1 O MET B 497 N THR B 444 SHEET 5 AA5 8 TYR B 469 LEU B 474 -1 N LYS B 473 O HIS B 496 SHEET 6 AA5 8 ILE B 459 TYR B 463 -1 N ILE B 462 O ILE B 472 SHEET 7 AA5 8 SER B 175 PHE B 180 1 N PHE B 179 O TYR B 463 SHEET 8 AA5 8 LYS B 189 SER B 192 -1 O VAL B 191 N VAL B 178 SHEET 1 AA6 6 VAL B 373 ARG B 376 0 SHEET 2 AA6 6 ILE B 101 ILE B 104 1 N VAL B 103 O ARG B 376 SHEET 3 AA6 6 GLU B 73 VAL B 79 1 N VAL B 78 O LEU B 102 SHEET 4 AA6 6 ARG B 400 MET B 411 1 O VAL B 410 N VAL B 79 SHEET 5 AA6 6 GLY B 390 ARG B 397 -1 N VAL B 391 O GLY B 406 SHEET 6 AA6 6 SER B 379 ARG B 387 -1 N ARG B 385 O ASP B 392 SHEET 1 AA7 5 VAL B 373 ARG B 376 0 SHEET 2 AA7 5 ILE B 101 ILE B 104 1 N VAL B 103 O ARG B 376 SHEET 3 AA7 5 GLU B 73 VAL B 79 1 N VAL B 78 O LEU B 102 SHEET 4 AA7 5 ARG B 400 MET B 411 1 O VAL B 410 N VAL B 79 SHEET 5 AA7 5 VAL B 592 ILE B 594 1 O ALA B 593 N MET B 411 SHEET 1 AA8 2 ARG B 116 ALA B 121 0 SHEET 2 AA8 2 ARG B 124 TYR B 129 -1 O GLY B 128 N ASN B 117 LINK NE2 HIS A 54 FE HEM A 702 1555 1555 2.24 LINK NE2 HIS A 562 FE HEM A 702 1555 1555 2.36 LINK NE2 HIS B 54 FE HEM B 702 1555 1555 2.27 LINK NE2 HIS B 562 FE HEM B 702 1555 1555 2.34 CRYST1 69.051 85.501 101.109 90.00 98.46 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014482 0.000000 0.002155 0.00000 SCALE2 0.000000 0.011696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009999 0.00000