HEADER VIRAL PROTEIN/ANTIVIRAL PROTEIN 05-NOV-20 7DEU TITLE CRYSTAL STRUCTURE OF SARS-COV-2 RBD IN COMPLEX WITH A NEUTRALIZING TITLE 2 ANTIBODY SCFV COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RBD; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ANTIBODY SCFV; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2, RBD, ANTIBODY, VIRAL PROTEIN, ANTIVIRAL PROTEIN, VIRAL KEYWDS 2 PROTEIN-ANTIVIRAL PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.ZHANG,G.ZHANG,X.LI,Z.RAO,Y.GUO REVDAT 3 29-NOV-23 7DEU 1 REMARK REVDAT 2 26-MAY-21 7DEU 1 JRNL REVDAT 1 31-MAR-21 7DEU 0 JRNL AUTH D.FU,G.ZHANG,Y.WANG,Z.ZHANG,H.HU,S.SHEN,J.WU,B.LI,X.LI, JRNL AUTH 2 Y.FANG,J.LIU,Q.WANG,Y.ZHOU,W.WANG,Y.LI,Z.LU,X.WANG,C.NIE, JRNL AUTH 3 Y.TIAN,D.CHEN,Y.WANG,X.ZHOU,Q.WANG,F.YU,C.ZHANG,C.DENG, JRNL AUTH 4 L.ZHOU,G.GUAN,N.SHAO,Z.LOU,F.DENG,H.ZHANG,X.CHEN,M.WANG, JRNL AUTH 5 L.LIU,Z.RAO,Y.GUO JRNL TITL STRUCTURAL BASIS FOR SARS-COV-2 NEUTRALIZING ANTIBODIES WITH JRNL TITL 2 NOVEL BINDING EPITOPES. JRNL REF PLOS BIOL. V. 19 01209 2021 JRNL REFN ESSN 1545-7885 JRNL PMID 33961621 JRNL DOI 10.1371/JOURNAL.PBIO.3001209 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3228 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 34131 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.7030 - 5.0595 1.00 2517 156 0.1959 0.2172 REMARK 3 2 5.0595 - 4.0166 1.00 2370 146 0.1547 0.1691 REMARK 3 3 4.0166 - 3.5090 1.00 2329 145 0.1846 0.2132 REMARK 3 4 3.5090 - 3.1883 1.00 2324 144 0.2122 0.2210 REMARK 3 5 3.1883 - 2.9598 1.00 2299 142 0.2230 0.2165 REMARK 3 6 2.9598 - 2.7853 1.00 2294 142 0.2407 0.2729 REMARK 3 7 2.7853 - 2.6458 1.00 2277 141 0.2453 0.2678 REMARK 3 8 2.6458 - 2.5306 1.00 2301 143 0.2486 0.2679 REMARK 3 9 2.5306 - 2.4332 1.00 2255 139 0.2472 0.2782 REMARK 3 10 2.4332 - 2.3493 1.00 2252 139 0.2407 0.2806 REMARK 3 11 2.3493 - 2.2758 1.00 2280 142 0.2489 0.2780 REMARK 3 12 2.2758 - 2.2108 0.94 2125 131 0.3039 0.3230 REMARK 3 13 2.2108 - 2.1526 1.00 2263 141 0.2561 0.2848 REMARK 3 14 2.1526 - 2.1000 1.00 2255 139 0.2406 0.2747 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DEU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1300019266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SWISSFEL ARAMIS REMARK 200 BEAMLINE : ESA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34362 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.63300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7CJF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8M POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE, 0.1M TRIS PH 8.5, 0.5% W/V POLYETHYLENE GLYCOL REMARK 280 MONOMETHYL ETHER 5000, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.05450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.30000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 118.58175 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.30000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.52725 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.30000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.30000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 118.58175 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.30000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.30000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.52725 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 79.05450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 347 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 365 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 528 REMARK 465 LYS A 529 REMARK 465 SER A 530 REMARK 465 ALA A 531 REMARK 465 ALA A 532 REMARK 465 ALA A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 SER B 119 REMARK 465 SER B 120 REMARK 465 GLY B 121 REMARK 465 GLY B 122 REMARK 465 GLY B 123 REMARK 465 GLY B 124 REMARK 465 SER B 125 REMARK 465 GLY B 126 REMARK 465 GLY B 127 REMARK 465 GLY B 128 REMARK 465 GLY B 129 REMARK 465 SER B 130 REMARK 465 ALA B 244 REMARK 465 ALA B 245 REMARK 465 HIS B 246 REMARK 465 HIS B 247 REMARK 465 HIS B 248 REMARK 465 HIS B 249 REMARK 465 HIS B 250 REMARK 465 HIS B 251 REMARK 465 HIS B 252 REMARK 465 HIS B 253 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 422 -54.15 -126.94 REMARK 500 ASP A 428 34.08 -98.14 REMARK 500 VAL A 445 -70.96 -68.53 REMARK 500 THR A 500 -7.94 86.99 REMARK 500 CYS A 525 -60.42 -128.85 REMARK 500 TYR B 103 -69.76 -95.33 REMARK 500 ALA B 106 -150.30 64.90 REMARK 500 ALA B 186 -33.89 69.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7DEO RELATED DB: PDB REMARK 900 RELATED ID: 7DET RELATED DB: PDB DBREF 7DEU A 334 530 UNP P0DTC2 SPIKE_SARS2 334 530 DBREF 7DEU B 1 253 PDB 7DEU 7DEU 1 253 SEQADV 7DEU ALA A 531 UNP P0DTC2 EXPRESSION TAG SEQADV 7DEU ALA A 532 UNP P0DTC2 EXPRESSION TAG SEQADV 7DEU ALA A 533 UNP P0DTC2 EXPRESSION TAG SEQADV 7DEU HIS A 534 UNP P0DTC2 EXPRESSION TAG SEQADV 7DEU HIS A 535 UNP P0DTC2 EXPRESSION TAG SEQADV 7DEU HIS A 536 UNP P0DTC2 EXPRESSION TAG SEQADV 7DEU HIS A 537 UNP P0DTC2 EXPRESSION TAG SEQADV 7DEU HIS A 538 UNP P0DTC2 EXPRESSION TAG SEQADV 7DEU HIS A 539 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 206 ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR ARG SEQRES 2 A 206 PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SER SEQRES 3 A 206 ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER ALA SEQRES 4 A 206 SER PHE SER THR PHE LYS CYS TYR GLY VAL SER PRO THR SEQRES 5 A 206 LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SEQRES 6 A 206 SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA SEQRES 7 A 206 PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN TYR LYS SEQRES 8 A 206 LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SEQRES 9 A 206 SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN TYR ASN SEQRES 10 A 206 TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS PRO SEQRES 11 A 206 PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA GLY SEQRES 12 A 206 SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR SEQRES 13 A 206 PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR ASN GLY SEQRES 14 A 206 VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER PHE SEQRES 15 A 206 GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO LYS SEQRES 16 A 206 LYS SER ALA ALA ALA HIS HIS HIS HIS HIS HIS SEQRES 1 B 253 GLU VAL GLN LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 B 253 PRO GLY ALA SER VAL LYS ILE SER CYS LYS THR SER GLY SEQRES 3 B 253 TYR THR PHE THR GLU TYR THR MET HIS TRP VAL LYS GLN SEQRES 4 B 253 SER HIS GLY LYS SER LEU GLU TRP ILE GLY GLY ILE ASN SEQRES 5 B 253 PRO ASN ASN GLY ASP ASN THR TYR ASN GLN LYS LEU LYS SEQRES 6 B 253 GLY LYS ALA THR LEU THR VAL HIS LYS SER SER SER THR SEQRES 7 B 253 ALA TYR MET GLU LEU ARG SER LEU THR SER GLU ASP SER SEQRES 8 B 253 ALA VAL TYR TYR CYS ALA ARG ASP GLY TYR PRO TYR TYR SEQRES 9 B 253 TYR ALA LEU ASP TYR TRP GLY GLN GLY THR SER VAL THR SEQRES 10 B 253 VAL SER SER GLY GLY GLY GLY SER GLY GLY GLY GLY SER SEQRES 11 B 253 GLY GLY GLY GLY SER ASP ILE VAL MET THR GLN SER GLN SEQRES 12 B 253 LYS PHE MET SER THR SER VAL GLY ASP ARG VAL SER VAL SEQRES 13 B 253 THR CYS LYS ALA SER GLN ASN VAL GLY THR ASN VAL ALA SEQRES 14 B 253 TRP TYR GLN GLN LYS PRO GLY GLN SER PRO LYS PRO LEU SEQRES 15 B 253 ILE TYR SER ALA SER SER ARG TYR SER GLY VAL PRO ASP SEQRES 16 B 253 ARG PHE THR GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 17 B 253 THR ILE SER ASN VAL GLN SER GLU ASP LEU ALA GLU TYR SEQRES 18 B 253 PHE CYS GLN GLN TYR ASN ASN TYR PRO TRP THR PHE GLY SEQRES 19 B 253 GLY GLY THR LYS LEU GLU ILE LYS ALA ALA ALA HIS HIS SEQRES 20 B 253 HIS HIS HIS HIS HIS HIS HET NAG A 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG C8 H15 N O6 FORMUL 4 HOH *229(H2 O) HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 SER A 349 TRP A 353 5 5 HELIX 3 AA3 ASP A 364 ASN A 370 1 7 HELIX 4 AA4 PRO A 384 LEU A 390 5 7 HELIX 5 AA5 ASP A 405 ILE A 410 5 6 HELIX 6 AA6 GLY A 416 ASN A 422 1 7 HELIX 7 AA7 SER A 438 SER A 443 1 6 HELIX 8 AA8 GLY A 502 TYR A 505 5 4 HELIX 9 AA9 THR B 28 TYR B 32 5 5 HELIX 10 AB1 GLN B 62 LYS B 65 5 4 HELIX 11 AB2 THR B 87 SER B 91 5 5 HELIX 12 AB3 GLN B 214 LEU B 218 5 5 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O ALA A 397 N LYS A 356 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O VAL A 512 N ASP A 398 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AA1 5 THR A 376 TYR A 380 -1 N LYS A 378 O VAL A 433 SHEET 1 AA2 2 LEU A 452 ARG A 454 0 SHEET 2 AA2 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA3 2 TYR A 473 GLN A 474 0 SHEET 2 AA3 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA4 4 GLN B 3 GLN B 6 0 SHEET 2 AA4 4 VAL B 18 SER B 25 -1 O LYS B 23 N GLN B 5 SHEET 3 AA4 4 THR B 78 LEU B 83 -1 O MET B 81 N ILE B 20 SHEET 4 AA4 4 ALA B 68 HIS B 73 -1 N HIS B 73 O THR B 78 SHEET 1 AA5 6 GLU B 10 LEU B 11 0 SHEET 2 AA5 6 THR B 114 THR B 117 1 O THR B 117 N GLU B 10 SHEET 3 AA5 6 ALA B 92 ASP B 99 -1 N ALA B 92 O VAL B 116 SHEET 4 AA5 6 MET B 34 GLN B 39 -1 N HIS B 35 O ALA B 97 SHEET 5 AA5 6 LEU B 45 ILE B 51 -1 O GLU B 46 N LYS B 38 SHEET 6 AA5 6 ASN B 58 TYR B 60 -1 O THR B 59 N GLY B 50 SHEET 1 AA6 4 GLU B 10 LEU B 11 0 SHEET 2 AA6 4 THR B 114 THR B 117 1 O THR B 117 N GLU B 10 SHEET 3 AA6 4 ALA B 92 ASP B 99 -1 N ALA B 92 O VAL B 116 SHEET 4 AA6 4 LEU B 107 TRP B 110 -1 O TYR B 109 N ARG B 98 SHEET 1 AA7 4 MET B 139 THR B 140 0 SHEET 2 AA7 4 VAL B 154 ALA B 160 -1 O LYS B 159 N THR B 140 SHEET 3 AA7 4 ASP B 205 ILE B 210 -1 O LEU B 208 N VAL B 156 SHEET 4 AA7 4 PHE B 197 SER B 202 -1 N THR B 198 O THR B 209 SHEET 1 AA8 6 PHE B 145 SER B 149 0 SHEET 2 AA8 6 THR B 237 LYS B 242 1 O GLU B 240 N MET B 146 SHEET 3 AA8 6 ALA B 219 GLN B 225 -1 N ALA B 219 O LEU B 239 SHEET 4 AA8 6 VAL B 168 GLN B 173 -1 N TYR B 171 O PHE B 222 SHEET 5 AA8 6 LYS B 180 TYR B 184 -1 O LYS B 180 N GLN B 172 SHEET 6 AA8 6 SER B 188 ARG B 189 -1 O SER B 188 N TYR B 184 SHEET 1 AA9 4 PHE B 145 SER B 149 0 SHEET 2 AA9 4 THR B 237 LYS B 242 1 O GLU B 240 N MET B 146 SHEET 3 AA9 4 ALA B 219 GLN B 225 -1 N ALA B 219 O LEU B 239 SHEET 4 AA9 4 THR B 232 PHE B 233 -1 O THR B 232 N GLN B 225 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.04 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.07 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.04 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.05 SSBOND 5 CYS B 22 CYS B 96 1555 1555 2.07 SSBOND 6 CYS B 158 CYS B 223 1555 1555 2.06 LINK ND2 ASN A 343 C1 NAG A 601 1555 1555 1.39 CISPEP 1 TYR B 101 PRO B 102 0 3.06 CISPEP 2 TYR B 229 PRO B 230 0 -6.79 CRYST1 84.600 84.600 158.109 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011820 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011820 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006325 0.00000