HEADER HYDROLASE 09-NOV-20 7DFQ TITLE CRYSTAL STRUCTURE OF A NOVEL 4-O-ALPHA-L-RHAMNOSYL-BETA-D- TITLE 2 GLUCURONIDASE FROM FUSARIUM OXYSPORUM 12S, LIGAND-FREE FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-O-ALPHA-L-RHAMNOSYL-BETA-D-GLUCURONIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.31; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FUSARIUM OXYSPORUM; SOURCE 3 ORGANISM_TAXID: 5507; SOURCE 4 STRAIN: 12S; SOURCE 5 GENE: FOBGLCA; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: X-33; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPICZ-ALPHA-A KEYWDS TIM BARREL, GH79, BETA-GLUCURONIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.KONDO,T.ARAKAWA,S.FUSHINOBU,T.SAKAMOTO REVDAT 3 30-OCT-24 7DFQ 1 REMARK REVDAT 2 25-AUG-21 7DFQ 1 JRNL REVDAT 1 17-MAR-21 7DFQ 0 JRNL AUTH T.KONDO,M.KICHIJO,M.NAKAYA,S.TAKENAKA,T.ARAKAWA,T.KOTAKE, JRNL AUTH 2 S.FUSHINOBU,T.SAKAMOTO JRNL TITL BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF A NOVEL JRNL TITL 2 4-O-ALPHA-L-RHAMNOSYL-BETA-D-GLUCURONIDASE FROM FUSARIUM JRNL TITL 3 OXYSPORUM. JRNL REF FEBS J. V. 288 4918 2021 JRNL REFN ISSN 1742-464X JRNL PMID 33645879 JRNL DOI 10.1111/FEBS.15795 REMARK 2 REMARK 2 RESOLUTION. 1.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 62631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3279 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.51 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.55 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4491 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 251 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3379 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.072 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.078 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3519 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3162 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4811 ; 1.855 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7290 ; 3.973 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 464 ; 6.858 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;40.123 ;24.894 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 501 ;12.507 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;20.072 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 542 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4129 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 824 ; 0.024 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7DFQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1300019222. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68990 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.510 REMARK 200 RESOLUTION RANGE LOW (A) : 65.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.470 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 39.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.57500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES-NAOH PH6.0, 30% (V/V) PEG MME REMARK 280 2000, 0.1M L-RHA, CRYSTAL WAS SOAKED INTO 20% GLYCEROL AT 298K REMARK 280 FOR 1 MIN, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.21550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.08850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.60800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.08850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.21550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.60800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A -1 REMARK 465 PHE A 0 REMARK 465 GLU A 458 REMARK 465 ASN A 459 REMARK 465 LYS A 460 REMARK 465 LEU A 461 REMARK 465 ILE A 462 REMARK 465 SER A 463 REMARK 465 GLU A 464 REMARK 465 GLU A 465 REMARK 465 ASP A 466 REMARK 465 LEU A 467 REMARK 465 GLN A 468 REMARK 465 SER A 469 REMARK 465 ALA A 470 REMARK 465 VAL A 471 REMARK 465 ASP A 472 REMARK 465 HIS A 473 REMARK 465 HIS A 474 REMARK 465 HIS A 475 REMARK 465 HIS A 476 REMARK 465 HIS A 477 REMARK 465 HIS A 478 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 20 80.26 -153.54 REMARK 500 ASN A 119 76.56 -102.90 REMARK 500 ASN A 310 58.23 -146.52 REMARK 500 ALA A 409 2.52 84.58 REMARK 500 GLN A 411 54.16 -99.69 REMARK 500 PRO A 413 170.11 -59.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1110 DISTANCE = 5.87 ANGSTROMS REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AMINO ACID SEQUENCE OF 4-O-ALPHA-L-RHAMNOSYL-BETA-D- REMARK 999 GLUCURONIDASE (FOBGLCA) HAS BEEN REGISTERED IN GENBANK, DDBJ AND REMARK 999 EMBL. ITS ACCESSION NUMBER IS "LC534636". DBREF 7DFQ A -1 478 PDB 7DFQ 7DFQ -1 478 SEQRES 1 A 480 GLU PHE LEU THR PHE ASN VAL PRO SER SER PRO PRO SER SEQRES 2 A 480 ASN SER SER ALA GLN LEU SER ASP ALA PRO VAL GLY VAL SEQRES 3 A 480 SER PHE GLU PHE PHE ALA PHE PRO GLY TYR TRP ASN ASP SEQRES 4 A 480 VAL PRO SER THR SER THR CYS LEU GLN ASN LEU LYS ASP SEQRES 5 A 480 LEU SER GLY THR TRP PRO PRO ILE ARG ILE GLY GLY THR SEQRES 6 A 480 THR GLN ASP ARG ALA THR TYR ASP ALA SER SER SER GLN SEQRES 7 A 480 GLN VAL THR TYR THR VAL ALA ASN ALA GLY ASP ALA PRO SEQRES 8 A 480 SER THR LEU THR PHE GLY PRO SER PHE MET SER LEU ALA SEQRES 9 A 480 GLY THR TYR ALA GLY GLN VAL THR ILE GLY PHE ASN ARG SEQRES 10 A 480 ARG LEU ASN ASN LEU ALA ASN THR VAL ALA ALA ALA SER SEQRES 11 A 480 LYS ALA VAL ASN GLU ILE ASN SER LEU HIS ALA ILE GLU SEQRES 12 A 480 LEU GLY ASN GLU PRO ASN PHE PHE SER GLY SER ASP PRO SEQRES 13 A 480 ILE ALA GLN GLY SER SER TRP THR ALA SER ALA ASP TYR SEQRES 14 A 480 ALA SER GLU VAL THR TRP GLN ASP ALA VAL CYS GLY ASN SEQRES 15 A 480 LEU SER ALA SER ASN LEU ILE SER ALA GLY VAL PHE PHE SEQRES 16 A 480 GLY THR SER PRO MET SER ILE ALA GLY LEU THR ALA VAL SEQRES 17 A 480 GLU GLY GLN ALA ASN SER TYR VAL ARG GLN TYR CYS SER SEQRES 18 A 480 HIS ASN TYR PRO GLN SER LYS SER THR ALA ASN LEU ALA SEQRES 19 A 480 ASN LEU MET SER HIS SER GLY ILE ALA SER GLN ILE LYS SEQRES 20 A 480 PRO PHE ALA LYS GLU VAL ALA ALA ALA LEU ALA LYS ASN SEQRES 21 A 480 LYS PRO HIS VAL PHE GLY GLU THR ASN SER ALA THR GLN SEQRES 22 A 480 GLY GLY GLY GLY ILE SER PRO THR TYR GLY ALA GLY LEU SEQRES 23 A 480 TRP LEU LEU ASP TYR VAL MET GLN ALA LEU ILE MET GLY SEQRES 24 A 480 THR GLU THR LEU TYR PHE HIS HIS GLY THR ILE GLY ASN SEQRES 25 A 480 CYS GLN TYR CYS TRP TRP GLY LYS TYR SER MET GLY SER SEQRES 26 A 480 PRO TYR PHE GLY ALA TYR PHE ALA THR MET ALA LEU ALA SEQRES 27 A 480 GLY ALA ASN LYS ILE ALA PRO LEU ASP ASP GLN THR THR SEQRES 28 A 480 GLY TYR ALA ALA TYR ALA ILE TYR LYS ASP ASP LYS PRO SEQRES 29 A 480 ILE ARG VAL LEU LEU TYR ASN SER ASP TYR TYR THR SER SEQRES 30 A 480 GLY SER ARG PRO SER GLN THR PHE THR LEU THR GLY LEU SEQRES 31 A 480 SER GLY SER THR VAL SER ALA LYS ARG LEU THR ALA ALA SEQRES 32 A 480 ALA SER THR SER ARG VAL ASP ALA GLY GLN SER PRO THR SEQRES 33 A 480 VAL ALA GLY GLN THR PHE GLU ASN GLY SER CYS LYS ILE SEQRES 34 A 480 GLN GLY GLN SER THR VAL GLU SER ALA THR VAL SER GLY SEQRES 35 A 480 GLY LYS ALA THR PHE THR LEU GLN ALA SER GLU ALA LEU SEQRES 36 A 480 LEU VAL THR LEU GLU ASN LYS LEU ILE SER GLU GLU ASP SEQRES 37 A 480 LEU GLN SER ALA VAL ASP HIS HIS HIS HIS HIS HIS HET NAG A 501 14 HET NAG A 502 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 4 HOH *510(H2 O) HELIX 1 AA1 ALA A 30 ASP A 37 1 8 HELIX 2 AA2 PRO A 39 GLY A 53 1 15 HELIX 3 AA3 GLY A 62 ASP A 66 5 5 HELIX 4 AA4 GLY A 95 GLY A 103 1 9 HELIX 5 AA5 ASN A 119 ILE A 134 1 16 HELIX 6 AA6 GLU A 145 PHE A 149 5 5 HELIX 7 AA7 ASP A 153 GLN A 157 5 5 HELIX 8 AA8 THR A 162 SER A 182 1 21 HELIX 9 AA9 SER A 199 GLY A 208 1 10 HELIX 10 AB1 GLN A 209 SER A 212 5 4 HELIX 11 AB2 SER A 225 ALA A 229 5 5 HELIX 12 AB3 ASN A 230 SER A 236 1 7 HELIX 13 AB4 SER A 236 LYS A 245 1 10 HELIX 14 AB5 PHE A 247 LYS A 257 1 11 HELIX 15 AB6 THR A 279 GLY A 297 1 19 HELIX 16 AB7 SER A 323 ALA A 336 1 14 SHEET 1 AA1 3 THR A 2 ASN A 4 0 SHEET 2 AA1 3 SER A 380 THR A 386 1 O THR A 384 N PHE A 3 SHEET 3 AA1 3 ALA A 443 GLN A 448 -1 O PHE A 445 N PHE A 383 SHEET 1 AA2 9 VAL A 22 GLU A 27 0 SHEET 2 AA2 9 ILE A 58 GLY A 61 1 O ARG A 59 N PHE A 26 SHEET 3 AA2 9 VAL A 109 PHE A 113 1 O GLY A 112 N ILE A 60 SHEET 4 AA2 9 LEU A 137 LEU A 142 1 O HIS A 138 N VAL A 109 SHEET 5 AA2 9 ILE A 187 PHE A 193 1 O SER A 188 N ILE A 140 SHEET 6 AA2 9 VAL A 214 ASN A 221 1 O HIS A 220 N PHE A 192 SHEET 7 AA2 9 HIS A 261 THR A 266 1 O VAL A 262 N SER A 219 SHEET 8 AA2 9 THR A 300 HIS A 305 1 O TYR A 302 N PHE A 263 SHEET 9 AA2 9 VAL A 22 GLU A 27 1 N GLY A 23 O LEU A 301 SHEET 1 AA3 3 ALA A 68 TYR A 70 0 SHEET 2 AA3 3 LEU A 92 PHE A 94 1 O PHE A 94 N THR A 69 SHEET 3 AA3 3 VAL A 78 THR A 79 -1 N THR A 79 O THR A 93 SHEET 1 AA4 6 LYS A 340 PRO A 343 0 SHEET 2 AA4 6 TYR A 351 LYS A 358 -1 O TYR A 357 N LYS A 340 SHEET 3 AA4 6 LYS A 361 ASN A 369 -1 O ILE A 363 N ILE A 356 SHEET 4 AA4 6 GLU A 451 THR A 456 -1 O VAL A 455 N VAL A 365 SHEET 5 AA4 6 THR A 392 THR A 399 -1 N LYS A 396 O LEU A 454 SHEET 6 AA4 6 THR A 414 VAL A 415 -1 O THR A 414 N THR A 399 SHEET 1 AA5 6 LYS A 340 PRO A 343 0 SHEET 2 AA5 6 TYR A 351 LYS A 358 -1 O TYR A 357 N LYS A 340 SHEET 3 AA5 6 LYS A 361 ASN A 369 -1 O ILE A 363 N ILE A 356 SHEET 4 AA5 6 GLU A 451 THR A 456 -1 O VAL A 455 N VAL A 365 SHEET 5 AA5 6 THR A 392 THR A 399 -1 N LYS A 396 O LEU A 454 SHEET 6 AA5 6 GLU A 434 THR A 437 -1 O GLU A 434 N ALA A 395 SHEET 1 AA6 2 THR A 419 PHE A 420 0 SHEET 2 AA6 2 ILE A 427 GLN A 428 -1 O GLN A 428 N THR A 419 SSBOND 1 CYS A 44 CYS A 425 1555 1555 2.01 SSBOND 2 CYS A 311 CYS A 314 1555 1555 2.13 LINK ND2 ASN A 12 C1 NAG A 501 1555 1555 1.44 LINK ND2 ASN A 180 C1 NAG A 502 1555 1555 1.26 CISPEP 1 SER A 196 PRO A 197 0 5.50 CRYST1 42.431 77.216 126.177 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023568 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012951 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007925 0.00000