HEADER PLANT PROTEIN 20-NOV-20 7DJK TITLE STRUCTURE OF FOUR TRUNCATED AND MUTATED FORMS OF QUENCHING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN SUPPRESSOR OF QUENCHING 1, CHLOROPLASTIC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TRX_NHL; COMPND 5 EC: 3.1.3.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: SOQ1, AT1G56500, F13N6.21; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS SUPPRESSOR, QUENCHING, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.M.YU,X.W.PAN,M.LI REVDAT 3 29-NOV-23 7DJK 1 REMARK REVDAT 2 21-DEC-22 7DJK 1 JRNL REVDAT 1 08-JUN-22 7DJK 0 JRNL AUTH G.YU,J.HAO,X.PAN,L.SHI,Y.ZHANG,J.WANG,H.FAN,Y.XIAO,F.YANG, JRNL AUTH 2 J.LOU,W.CHANG,A.MALNOE,M.LI JRNL TITL STRUCTURE OF ARABIDOPSIS SOQ1 LUMENAL REGION UNVEILS JRNL TITL 2 C-TERMINAL DOMAIN ESSENTIAL FOR NEGATIVE REGULATION OF JRNL TITL 3 PHOTOPROTECTIVE QH. JRNL REF NAT.PLANTS V. 8 840 2022 JRNL REFN ESSN 2055-0278 JRNL PMID 35798975 JRNL DOI 10.1038/S41477-022-01177-Z REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.344 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 25154 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.097 REMARK 3 FREE R VALUE TEST SET COUNT : 1282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8396 - 5.8239 0.97 2794 135 0.1942 0.2077 REMARK 3 2 5.8239 - 4.6239 0.97 2620 151 0.1505 0.1709 REMARK 3 3 4.6239 - 4.0398 0.96 2594 145 0.1442 0.1768 REMARK 3 4 4.0398 - 3.6706 1.00 2660 138 0.1673 0.2248 REMARK 3 5 3.6706 - 3.4076 1.00 2662 144 0.1872 0.2403 REMARK 3 6 3.4076 - 3.2067 1.00 2668 155 0.1916 0.2680 REMARK 3 7 3.2067 - 3.0462 0.99 2600 142 0.2038 0.2584 REMARK 3 8 3.0462 - 2.9136 1.00 2644 141 0.2097 0.2597 REMARK 3 9 2.9136 - 2.8015 0.99 2630 131 0.2241 0.2881 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.238 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.885 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4088 REMARK 3 ANGLE : 1.223 5550 REMARK 3 CHIRALITY : 0.072 613 REMARK 3 PLANARITY : 0.011 734 REMARK 3 DIHEDRAL : 19.904 1504 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 203.9872 49.5195 52.5107 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.3488 REMARK 3 T33: 0.2189 T12: 0.0321 REMARK 3 T13: -0.0136 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.8873 L22: 0.8502 REMARK 3 L33: 1.6269 L12: -0.0625 REMARK 3 L13: -0.6933 L23: 0.2226 REMARK 3 S TENSOR REMARK 3 S11: 0.0888 S12: 0.2500 S13: -0.0052 REMARK 3 S21: -0.0490 S22: -0.1003 S23: 0.0288 REMARK 3 S31: -0.1720 S32: -0.3530 S33: 0.0160 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DJK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1300019486. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25154 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: 6GC1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NACL, 0.1 M TRI-SODIUM CITRATE REMARK 280 PH 5.6, 12% (W/V) POLYETHYLENE GLYCOL 4000 (PEG 4000), VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 91.59550 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 91.59550 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 60.44700 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 91.59550 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 91.59550 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 60.44700 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 91.59550 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 91.59550 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 60.44700 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 91.59550 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 91.59550 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 60.44700 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 91.59550 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 91.59550 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 60.44700 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 91.59550 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 91.59550 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 60.44700 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 91.59550 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 91.59550 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 60.44700 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 91.59550 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 91.59550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 60.44700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 389 REMARK 465 GLY A 390 REMARK 465 GLN A 391 REMARK 465 THR A 392 REMARK 465 LYS A 908 REMARK 465 ALA A 909 REMARK 465 LYS A 910 REMARK 465 SER A 911 REMARK 465 LEU A 912 REMARK 465 LYS A 913 REMARK 465 ARG A 914 REMARK 465 LEU A 915 REMARK 465 ARG A 916 REMARK 465 LYS A 917 REMARK 465 ARG A 918 REMARK 465 ALA A 919 REMARK 465 SER A 920 REMARK 465 ALA A 921 REMARK 465 ASP A 922 REMARK 465 THR A 923 REMARK 465 LYS A 924 REMARK 465 ILE A 925 REMARK 465 VAL A 926 REMARK 465 LYS A 927 REMARK 465 VAL A 928 REMARK 465 ASP A 929 REMARK 465 SER A 930 REMARK 465 VAL A 931 REMARK 465 THR A 932 REMARK 465 SER A 933 REMARK 465 ARG A 934 REMARK 465 GLU A 935 REMARK 465 GLY A 936 REMARK 465 ASP A 937 REMARK 465 LEU A 938 REMARK 465 ASN A 939 REMARK 465 LEU A 940 REMARK 465 LYS A 941 REMARK 465 ILE A 942 REMARK 465 SER A 943 REMARK 465 LEU A 944 REMARK 465 PRO A 945 REMARK 465 ASP A 946 REMARK 465 GLY A 947 REMARK 465 TYR A 948 REMARK 465 HIS A 949 REMARK 465 PHE A 950 REMARK 465 SER A 951 REMARK 465 LYS A 952 REMARK 465 GLU A 953 REMARK 465 ALA A 954 REMARK 465 ARG A 955 REMARK 465 SER A 956 REMARK 465 LYS A 957 REMARK 465 PHE A 958 REMARK 465 VAL A 959 REMARK 465 VAL A 960 REMARK 465 ASP A 961 REMARK 465 VAL A 962 REMARK 465 GLU A 963 REMARK 465 PRO A 964 REMARK 465 GLU A 965 REMARK 465 ASN A 966 REMARK 465 ALA A 967 REMARK 465 VAL A 968 REMARK 465 ALA A 969 REMARK 465 ILE A 970 REMARK 465 ASP A 971 REMARK 465 PRO A 972 REMARK 465 THR A 973 REMARK 465 GLU A 974 REMARK 465 GLY A 975 REMARK 465 THR A 976 REMARK 465 LEU A 977 REMARK 465 SER A 978 REMARK 465 PRO A 979 REMARK 465 GLU A 980 REMARK 465 GLY A 981 REMARK 465 SER A 982 REMARK 465 THR A 983 REMARK 465 MET A 984 REMARK 465 LEU A 985 REMARK 465 HIS A 986 REMARK 465 PHE A 987 REMARK 465 ILE A 988 REMARK 465 GLN A 989 REMARK 465 SER A 990 REMARK 465 SER A 991 REMARK 465 THR A 992 REMARK 465 SER A 993 REMARK 465 ALA A 994 REMARK 465 SER A 995 REMARK 465 VAL A 996 REMARK 465 GLY A 997 REMARK 465 LYS A 998 REMARK 465 ILE A 999 REMARK 465 SER A 1000 REMARK 465 CYS A 1001 REMARK 465 LYS A 1002 REMARK 465 VAL A 1003 REMARK 465 TYR A 1004 REMARK 465 TYR A 1005 REMARK 465 CYS A 1006 REMARK 465 LYS A 1007 REMARK 465 GLU A 1008 REMARK 465 ASP A 1009 REMARK 465 GLU A 1010 REMARK 465 VAL A 1011 REMARK 465 CYS A 1012 REMARK 465 LEU A 1013 REMARK 465 TYR A 1014 REMARK 465 GLN A 1015 REMARK 465 SER A 1016 REMARK 465 VAL A 1017 REMARK 465 GLN A 1018 REMARK 465 PHE A 1019 REMARK 465 GLU A 1020 REMARK 465 VAL A 1021 REMARK 465 PRO A 1022 REMARK 465 PHE A 1023 REMARK 465 LYS A 1024 REMARK 465 VAL A 1025 REMARK 465 GLU A 1026 REMARK 465 SER A 1027 REMARK 465 GLU A 1028 REMARK 465 LEU A 1029 REMARK 465 SER A 1030 REMARK 465 ALA A 1031 REMARK 465 SER A 1032 REMARK 465 PRO A 1033 REMARK 465 THR A 1034 REMARK 465 ILE A 1035 REMARK 465 THR A 1036 REMARK 465 PHE A 1037 REMARK 465 THR A 1038 REMARK 465 VAL A 1039 REMARK 465 THR A 1040 REMARK 465 PRO A 1041 REMARK 465 ARG A 1042 REMARK 465 ALA A 1043 REMARK 465 PRO A 1044 REMARK 465 ASP A 1045 REMARK 465 ALA A 1046 REMARK 465 GLY A 1047 REMARK 465 GLY A 1048 REMARK 465 LEU A 1049 REMARK 465 GLN A 1050 REMARK 465 LEU A 1051 REMARK 465 GLN A 1052 REMARK 465 GLY A 1053 REMARK 465 THR A 1054 REMARK 465 ARG A 1055 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 448 40.21 -108.06 REMARK 500 PRO A 550 61.69 -69.35 REMARK 500 ASN A 579 76.79 44.56 REMARK 500 ILE A 601 -64.42 -124.02 REMARK 500 GLN A 626 -85.60 -127.61 REMARK 500 ASN A 663 23.00 -147.29 REMARK 500 ASN A 793 130.94 -172.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1290 DISTANCE = 6.12 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1104 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 628 O REMARK 620 2 ASP A 686 OD1 112.5 REMARK 620 3 HOH A1235 O 67.2 75.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1106 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1251 O REMARK 620 2 HOH A1282 O 160.5 REMARK 620 N 1 DBREF 7DJK A 391 1055 UNP Q8VZ10 SOQ1_ARATH 391 1055 SEQADV 7DJK MET A 389 UNP Q8VZ10 INITIATING METHIONINE SEQADV 7DJK GLY A 390 UNP Q8VZ10 EXPRESSION TAG SEQADV 7DJK SER A 430 UNP Q8VZ10 CYS 430 ENGINEERED MUTATION SEQADV 7DJK SER A 431 UNP Q8VZ10 CYS 431 ENGINEERED MUTATION SEQADV 7DJK SER A 434 UNP Q8VZ10 CYS 434 ENGINEERED MUTATION SEQRES 1 A 667 MET GLY GLN THR ALA THR THR VAL PRO GLU PHE PRO SER SEQRES 2 A 667 LYS LEU ASP TRP LEU ASN THR ALA PRO LEU GLN PHE ARG SEQRES 3 A 667 ARG ASP LEU LYS GLY LYS VAL VAL ILE LEU ASP PHE TRP SEQRES 4 A 667 THR TYR SER SER ILE ASN SER MET HIS VAL LEU PRO ASP SEQRES 5 A 667 LEU GLU PHE LEU GLU LYS LYS TYR LYS ASP MET PRO PHE SEQRES 6 A 667 THR VAL VAL GLY VAL HIS SER ALA LYS PHE ASP ASN GLU SEQRES 7 A 667 LYS ASP LEU ASP ALA ILE ARG ASN ALA VAL LEU ARG TYR SEQRES 8 A 667 ASP ILE SER HIS PRO VAL VAL ASN ASP GLY ASP MET TYR SEQRES 9 A 667 MET TRP ARG GLU LEU GLY ILE ASN SER TRP PRO THR PHE SEQRES 10 A 667 ALA VAL VAL SER PRO ASN GLY LYS VAL ILE ALA GLN ILE SEQRES 11 A 667 ALA GLY GLU GLY HIS ARG LYS ASP LEU ASP ASP VAL VAL SEQRES 12 A 667 ALA ALA ALA LEU THR TYR TYR GLY GLY LYS ASN VAL LEU SEQRES 13 A 667 ASP SER THR PRO LEU PRO THR ARG LEU GLU LYS ASP ASN SEQRES 14 A 667 ASP PRO ARG LEU ALA THR SER PRO LEU LYS PHE PRO GLY SEQRES 15 A 667 LYS LEU ALA ILE ASP THR LEU ASN ASN ARG LEU PHE ILE SEQRES 16 A 667 SER ASP SER ASN HIS ASN ARG ILE ILE VAL THR ASP LEU SEQRES 17 A 667 GLU GLY ASN PHE ILE VAL GLN ILE GLY SER SER GLY GLU SEQRES 18 A 667 GLU GLY PHE GLN ASP GLY SER PHE GLU ASP ALA ALA PHE SEQRES 19 A 667 ASN ARG PRO GLN GLY LEU ALA TYR ASN ALA LYS LYS ASN SEQRES 20 A 667 LEU LEU TYR VAL ALA ASP THR GLU ASN HIS ALA LEU ARG SEQRES 21 A 667 GLU ILE ASP PHE VAL ASN GLU ARG VAL GLN THR LEU ALA SEQRES 22 A 667 GLY ASN GLY THR LYS GLY SER ASP TYR GLN GLY GLY ARG SEQRES 23 A 667 LYS GLY THR LYS GLN LEU LEU ASN SER PRO TRP ASP VAL SEQRES 24 A 667 CYS PHE GLU PRO VAL ASN GLU LYS VAL TYR ILE ALA MET SEQRES 25 A 667 ALA GLY GLN HIS GLN ILE TRP GLU TYR SER VAL LEU ASP SEQRES 26 A 667 GLY ILE THR ARG VAL PHE SER GLY ASN GLY TYR GLU ARG SEQRES 27 A 667 ASN LEU ASN GLY SER THR PRO GLN THR THR SER PHE ALA SEQRES 28 A 667 GLN PRO SER GLY ILE SER LEU GLY PRO ASP LEU LYS GLU SEQRES 29 A 667 ALA TYR ILE ALA ASP SER GLU SER SER SER ILE ARG ALA SEQRES 30 A 667 LEU ASP LEU GLN THR GLY GLY SER ARG LEU LEU ALA GLY SEQRES 31 A 667 GLY ASP PRO TYR PHE SER GLU ASN LEU PHE LYS PHE GLY SEQRES 32 A 667 ASP ASN ASP GLY VAL GLY ALA GLU VAL LEU LEU GLN HIS SEQRES 33 A 667 PRO LEU GLY VAL LEU CYS ALA ASN ASP GLY GLN ILE TYR SEQRES 34 A 667 LEU THR ASP SER TYR ASN HIS LYS ILE LYS LYS LEU ASP SEQRES 35 A 667 PRO VAL THR LYS ARG VAL VAL THR LEU ALA GLY THR GLY SEQRES 36 A 667 LYS ALA GLY PHE LYS ASP GLY LYS VAL LYS GLY ALA GLN SEQRES 37 A 667 LEU SER GLU PRO ALA GLY LEU ALA ILE THR GLU ASN GLY SEQRES 38 A 667 ARG LEU PHE VAL ALA ASP THR ASN ASN SER LEU ILE ARG SEQRES 39 A 667 TYR ILE ASP LEU ASN LYS GLY GLU ASP SER GLU ILE LEU SEQRES 40 A 667 THR LEU GLU LEU LYS GLY VAL GLN PRO PRO THR PRO LYS SEQRES 41 A 667 ALA LYS SER LEU LYS ARG LEU ARG LYS ARG ALA SER ALA SEQRES 42 A 667 ASP THR LYS ILE VAL LYS VAL ASP SER VAL THR SER ARG SEQRES 43 A 667 GLU GLY ASP LEU ASN LEU LYS ILE SER LEU PRO ASP GLY SEQRES 44 A 667 TYR HIS PHE SER LYS GLU ALA ARG SER LYS PHE VAL VAL SEQRES 45 A 667 ASP VAL GLU PRO GLU ASN ALA VAL ALA ILE ASP PRO THR SEQRES 46 A 667 GLU GLY THR LEU SER PRO GLU GLY SER THR MET LEU HIS SEQRES 47 A 667 PHE ILE GLN SER SER THR SER ALA SER VAL GLY LYS ILE SEQRES 48 A 667 SER CYS LYS VAL TYR TYR CYS LYS GLU ASP GLU VAL CYS SEQRES 49 A 667 LEU TYR GLN SER VAL GLN PHE GLU VAL PRO PHE LYS VAL SEQRES 50 A 667 GLU SER GLU LEU SER ALA SER PRO THR ILE THR PHE THR SEQRES 51 A 667 VAL THR PRO ARG ALA PRO ASP ALA GLY GLY LEU GLN LEU SEQRES 52 A 667 GLN GLY THR ARG HET CL A1101 1 HET CL A1102 1 HET NA A1103 1 HET NA A1104 1 HET NA A1105 1 HET NA A1106 1 HET NA A1107 1 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 2 CL 2(CL 1-) FORMUL 4 NA 5(NA 1+) FORMUL 9 HOH *90(H2 O) HELIX 1 AA1 SER A 431 TYR A 448 1 18 HELIX 2 AA2 PHE A 463 LYS A 467 5 5 HELIX 3 AA3 ASP A 468 TYR A 479 1 12 HELIX 4 AA4 MET A 491 GLY A 498 1 8 HELIX 5 AA5 HIS A 523 LYS A 541 1 19 HELIX 6 AA6 LEU A 553 ASP A 558 5 6 HELIX 7 AA7 PRO A 559 SER A 564 1 6 HELIX 8 AA8 SER A 586 ASN A 589 5 4 HELIX 9 AA9 THR A 642 ASN A 644 5 3 HELIX 10 AB1 THR A 677 GLN A 679 5 3 HELIX 11 AB2 THR A 732 THR A 736 5 5 HELIX 12 AB3 ALA A 798 VAL A 800 5 3 HELIX 13 AB4 SER A 821 HIS A 824 5 4 HELIX 14 AB5 LYS A 851 ALA A 855 5 5 HELIX 15 AB6 LYS A 888 SER A 892 5 5 SHEET 1 AA1 6 TRP A 405 LEU A 406 0 SHEET 2 AA1 6 VAL A 485 VAL A 486 -1 O VAL A 485 N LEU A 406 SHEET 3 AA1 6 PHE A 453 HIS A 459 1 N HIS A 459 O VAL A 486 SHEET 4 AA1 6 VAL A 421 TRP A 427 1 N ILE A 423 O VAL A 456 SHEET 5 AA1 6 THR A 504 VAL A 508 -1 O ALA A 506 N LEU A 424 SHEET 6 AA1 6 VAL A 514 ALA A 519 -1 O ILE A 518 N PHE A 505 SHEET 1 AA2 4 LEU A 572 ASP A 575 0 SHEET 2 AA2 4 ARG A 580 ASP A 585 -1 O PHE A 582 N ALA A 573 SHEET 3 AA2 4 ARG A 590 THR A 594 -1 O THR A 594 N LEU A 581 SHEET 4 AA2 4 PHE A 600 ILE A 604 -1 O ILE A 604 N ILE A 591 SHEET 1 AA3 5 GLY A 615 SER A 616 0 SHEET 2 AA3 5 ARG A 656 GLY A 662 -1 O VAL A 657 N GLY A 615 SHEET 3 AA3 5 ALA A 646 ASP A 651 -1 N GLU A 649 O GLN A 658 SHEET 4 AA3 5 LEU A 636 ASP A 641 -1 N LEU A 637 O ILE A 650 SHEET 5 AA3 5 LEU A 628 ASN A 631 -1 N ALA A 629 O TYR A 638 SHEET 1 AA4 5 GLY A 672 LYS A 675 0 SHEET 2 AA4 5 ILE A 715 SER A 720 -1 O THR A 716 N GLY A 673 SHEET 3 AA4 5 GLN A 705 SER A 710 -1 N ILE A 706 O PHE A 719 SHEET 4 AA4 5 LYS A 695 MET A 700 -1 N VAL A 696 O TYR A 709 SHEET 5 AA4 5 CYS A 688 GLU A 690 -1 N GLU A 690 O LYS A 695 SHEET 1 AA5 4 SER A 745 LEU A 746 0 SHEET 2 AA5 4 GLU A 752 ASP A 757 -1 O TYR A 754 N SER A 745 SHEET 3 AA5 4 SER A 762 ASP A 767 -1 O LEU A 766 N ALA A 753 SHEET 4 AA5 4 SER A 773 GLY A 778 -1 O ARG A 774 N ALA A 765 SHEET 1 AA6 5 GLY A 795 VAL A 796 0 SHEET 2 AA6 5 ARG A 835 ALA A 840 -1 O VAL A 836 N GLY A 795 SHEET 3 AA6 5 LYS A 825 LEU A 829 -1 N ILE A 826 O LEU A 839 SHEET 4 AA6 5 ILE A 816 ASP A 820 -1 N ILE A 816 O LEU A 829 SHEET 5 AA6 5 GLY A 807 CYS A 810 -1 N LEU A 809 O TYR A 817 SHEET 1 AA7 4 ALA A 864 ILE A 865 0 SHEET 2 AA7 4 ARG A 870 ASP A 875 -1 O PHE A 872 N ALA A 864 SHEET 3 AA7 4 LEU A 880 ASP A 885 -1 O ILE A 884 N LEU A 871 SHEET 4 AA7 4 ILE A 894 THR A 896 -1 O LEU A 895 N TYR A 883 LINK O LEU A 628 NA NA A1104 1555 1555 2.62 LINK OD1 ASP A 686 NA NA A1104 1555 1555 2.69 LINK NA NA A1104 O HOH A1235 1555 1555 2.46 LINK NA NA A1105 O HOH A1283 1555 1555 2.93 LINK NA NA A1106 O HOH A1251 1555 1555 2.36 LINK NA NA A1106 O HOH A1282 1555 1555 2.43 LINK NA NA A1107 O HOH A1255 1555 1555 2.57 CISPEP 1 TRP A 502 PRO A 503 0 0.13 CRYST1 183.191 183.191 120.894 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005459 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005459 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008272 0.00000