HEADER LYASE 30-NOV-20 7DLY
TITLE CRYSTAL STRUCTURE OF ARABIDOPSIS ACS7 MUTANT IN COMPLEX WITH PPG
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: ACC SYNTHASE 7,S-ADENOSYL-L-METHIONINE METHYLTHIOADENOSINE-
COMPND 5 LYASE 7;
COMPND 6 EC: 4.4.1.14;
COMPND 7 ENGINEERED: YES;
COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA;
SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS;
SOURCE 4 ORGANISM_TAXID: 3702;
SOURCE 5 GENE: ACS7, AT4G26200, T25K17.10;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS ACC SYNTHETASE, ETHYLENE, PLANT PROTEIN, LYASE
EXPDTA X-RAY DIFFRACTION
AUTHOR B.HAO,Y.ZHANG,X.LI,Z.RAO
REVDAT 3 29-NOV-23 7DLY 1 REMARK
REVDAT 2 23-FEB-22 7DLY 1 JRNL
REVDAT 1 29-SEP-21 7DLY 0
JRNL AUTH C.XU,B.HAO,G.SUN,Y.MEI,L.SUN,Y.SUN,Y.WANG,Y.ZHANG,W.ZHANG,
JRNL AUTH 2 M.ZHANG,Y.ZHANG,D.WANG,Z.RAO,X.LI,Q.J.SHEN,N.N.WANG
JRNL TITL DUAL ACTIVITIES OF ACC SYNTHASE: NOVEL CLUES REGARDING THE
JRNL TITL 2 MOLECULAR EVOLUTION OF ACS GENES.
JRNL REF SCI ADV V. 7 G8752 2021
JRNL REFN ESSN 2375-2548
JRNL PMID 34757795
JRNL DOI 10.1126/SCIADV.ABG8752
REMARK 2
REMARK 2 RESOLUTION. 2.94 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.18.2_3874
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.94
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.16
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960
REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5
REMARK 3 NUMBER OF REFLECTIONS : 20008
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.229
REMARK 3 R VALUE (WORKING SET) : 0.224
REMARK 3 FREE R VALUE : 0.277
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.720
REMARK 3 FREE R VALUE TEST SET COUNT : 1945
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 47.1600 - 7.0800 0.99 1346 131 0.1551 0.1992
REMARK 3 2 7.0800 - 5.6200 0.98 1331 145 0.1838 0.2356
REMARK 3 3 5.6200 - 4.9100 1.00 1359 137 0.1614 0.2299
REMARK 3 4 4.9100 - 4.4700 0.99 1321 148 0.1531 0.2178
REMARK 3 5 4.4600 - 4.1500 0.99 1347 155 0.1638 0.2201
REMARK 3 6 4.1400 - 3.9000 0.91 1208 143 0.2444 0.2538
REMARK 3 7 3.9000 - 3.7100 0.89 1172 116 0.4145 0.4624
REMARK 3 8 3.7000 - 3.5400 0.83 1137 134 0.4979 0.5512
REMARK 3 9 3.5400 - 3.4100 0.89 1206 122 0.4918 0.5417
REMARK 3 10 3.4100 - 3.2900 0.94 1256 127 0.4296 0.4532
REMARK 3 11 3.2900 - 3.1900 1.00 1365 157 0.3427 0.4212
REMARK 3 12 3.1900 - 3.1000 0.99 1329 146 0.2940 0.3638
REMARK 3 13 3.1000 - 3.0100 1.00 1359 139 0.2919 0.3380
REMARK 3 14 3.0100 - 2.9400 1.00 1327 145 0.3054 0.3668
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.630
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 104.8
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : NULL NULL
REMARK 3 ANGLE : NULL NULL
REMARK 3 CHIRALITY : NULL NULL
REMARK 3 PLANARITY : NULL NULL
REMARK 3 DIHEDRAL : NULL NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 7DLY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-DEC-20.
REMARK 100 THE DEPOSITION ID IS D_1300019649.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 15-SEP-17
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.6
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SSRF
REMARK 200 BEAMLINE : BL17U
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.000
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20168
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.940
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3
REMARK 200 DATA REDUNDANCY : 5.400
REMARK 200 R MERGE (I) : 0.08600
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHENIX
REMARK 200 STARTING MODEL: 7DLW
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 51.10
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.6, 6% (W/V) PEG
REMARK 280 10000, VAPOR DIFFUSION, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z
REMARK 290 3555 -X+Y,-X,Z
REMARK 290 4555 X+2/3,Y+1/3,Z+1/3
REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3
REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3
REMARK 290 7555 X+1/3,Y+2/3,Z+2/3
REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3
REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 82.21250
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 47.46541
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.62700
REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 82.21250
REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 47.46541
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.62700
REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 82.21250
REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 47.46541
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.62700
REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 94.93082
REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 65.25400
REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 94.93082
REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 65.25400
REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 94.93082
REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 65.25400
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 6300 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 30980 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 GLY A 2
REMARK 465 LEU A 3
REMARK 465 PRO A 4
REMARK 465 LEU A 5
REMARK 465 MET A 6
REMARK 465 MET A 7
REMARK 465 GLU A 8
REMARK 465 ARG A 9
REMARK 465 SER A 10
REMARK 465 SER A 11
REMARK 465 ASN A 12
REMARK 465 ASN A 13
REMARK 465 ASN A 14
REMARK 465 LYS A 75
REMARK 465 LYS A 76
REMARK 465 ASN A 77
REMARK 465 PRO A 78
REMARK 465 GLU A 79
REMARK 465 GLY A 80
REMARK 465 SER A 81
REMARK 465 MET A 82
REMARK 465 TRP A 83
REMARK 465 GLY A 84
REMARK 465 SER A 85
REMARK 465 LYS A 86
REMARK 465 GLY A 87
REMARK 465 ALA A 88
REMARK 465 PRO A 89
REMARK 465 GLY A 90
REMARK 465 PHE A 91
REMARK 465 ARG A 92
REMARK 465 GLU A 93
REMARK 465 ASN A 94
REMARK 465 ALA A 95
REMARK 465 LEU A 96
REMARK 465 TYR A 97
REMARK 465 GLY A 98
REMARK 465 ASN A 99
REMARK 465 PHE A 100
REMARK 465 ARG A 101
REMARK 465 GLY A 102
REMARK 465 GLY A 103
REMARK 465 GLU A 104
REMARK 465 ARG A 445
REMARK 465 ARG A 446
REMARK 465 PHE A 447
REMARK 465 MET B 1
REMARK 465 GLY B 2
REMARK 465 LEU B 3
REMARK 465 PRO B 4
REMARK 465 LEU B 5
REMARK 465 MET B 6
REMARK 465 MET B 7
REMARK 465 GLU B 8
REMARK 465 ARG B 9
REMARK 465 SER B 10
REMARK 465 SER B 11
REMARK 465 GLU B 74
REMARK 465 LYS B 75
REMARK 465 LYS B 76
REMARK 465 ASN B 77
REMARK 465 PRO B 78
REMARK 465 GLU B 79
REMARK 465 GLY B 80
REMARK 465 SER B 81
REMARK 465 MET B 82
REMARK 465 TRP B 83
REMARK 465 GLY B 84
REMARK 465 SER B 85
REMARK 465 LYS B 86
REMARK 465 GLY B 87
REMARK 465 ALA B 88
REMARK 465 PRO B 89
REMARK 465 GLY B 90
REMARK 465 PHE B 91
REMARK 465 ARG B 92
REMARK 465 GLU B 93
REMARK 465 ASN B 94
REMARK 465 ALA B 95
REMARK 465 LEU B 96
REMARK 465 TYR B 97
REMARK 465 GLY B 98
REMARK 465 ASN B 99
REMARK 465 PHE B 100
REMARK 465 ARG B 101
REMARK 465 GLY B 102
REMARK 465 GLY B 103
REMARK 465 GLU B 104
REMARK 465 ARG B 444
REMARK 465 ARG B 445
REMARK 465 ARG B 446
REMARK 465 PHE B 447
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 25 52.25 -100.72
REMARK 500 GLU A 29 39.54 -88.09
REMARK 500 ASN A 43 87.70 -158.50
REMARK 500 ASN A 50 67.40 -158.67
REMARK 500 ASN A 150 -18.56 85.24
REMARK 500 ASN A 184 42.04 -140.95
REMARK 500 ASN A 239 67.64 63.26
REMARK 500 GLU A 246 39.83 -94.88
REMARK 500 VAL A 265 -50.98 -121.81
REMARK 500 TYR A 300 31.52 -85.85
REMARK 500 THR A 315 56.81 -159.94
REMARK 500 LYS A 359 0.98 -66.92
REMARK 500 PHE A 379 48.84 -75.14
REMARK 500 LEU A 380 39.46 -151.08
REMARK 500 LYS A 384 54.33 35.11
REMARK 500 ASN A 401 75.26 57.74
REMARK 500 LEU A 402 115.48 -165.54
REMARK 500 ASN A 424 42.08 -106.52
REMARK 500 ASN B 14 61.06 -117.65
REMARK 500 ASP B 25 51.83 -99.90
REMARK 500 GLU B 29 37.19 -87.16
REMARK 500 ASN B 43 88.51 -158.88
REMARK 500 SER B 48 -70.52 -78.93
REMARK 500 HIS B 49 -71.26 -37.81
REMARK 500 ASN B 150 -19.13 87.04
REMARK 500 ASN B 184 41.64 -141.15
REMARK 500 ASN B 239 67.02 64.65
REMARK 500 GLU B 246 40.53 -95.69
REMARK 500 VAL B 265 -50.94 -121.75
REMARK 500 TYR B 300 31.74 -86.04
REMARK 500 THR B 315 58.02 -158.43
REMARK 500 LYS B 359 0.53 -66.95
REMARK 500 LEU B 380 39.31 -150.89
REMARK 500 LYS B 384 54.67 33.09
REMARK 500 ASN B 401 75.21 57.32
REMARK 500 LEU B 402 115.34 -165.03
REMARK 500 ASN B 424 41.96 -105.06
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PPG A 1001
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue PPG B 1001
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 7DLW RELATED DB: PDB
DBREF 7DLY A 1 447 UNP Q9STR4 1A17_ARATH 1 447
DBREF 7DLY B 1 447 UNP Q9STR4 1A17_ARATH 1 447
SEQADV 7DLY TYR A 97 UNP Q9STR4 PHE 97 ENGINEERED MUTATION
SEQADV 7DLY GLY A 98 UNP Q9STR4 GLN 98 ENGINEERED MUTATION
SEQADV 7DLY ASN A 99 UNP Q9STR4 ASP 99 ENGINEERED MUTATION
SEQADV 7DLY PHE A 100 UNP Q9STR4 TYR 100 ENGINEERED MUTATION
SEQADV 7DLY ARG A 101 UNP Q9STR4 HIS 101 ENGINEERED MUTATION
SEQADV 7DLY GLY A 103 UNP Q9STR4 LEU 103 ENGINEERED MUTATION
SEQADV 7DLY GLU A 104 UNP Q9STR4 LYS 104 ENGINEERED MUTATION
SEQADV 7DLY TYR B 97 UNP Q9STR4 PHE 97 ENGINEERED MUTATION
SEQADV 7DLY GLY B 98 UNP Q9STR4 GLN 98 ENGINEERED MUTATION
SEQADV 7DLY ASN B 99 UNP Q9STR4 ASP 99 ENGINEERED MUTATION
SEQADV 7DLY PHE B 100 UNP Q9STR4 TYR 100 ENGINEERED MUTATION
SEQADV 7DLY ARG B 101 UNP Q9STR4 HIS 101 ENGINEERED MUTATION
SEQADV 7DLY GLY B 103 UNP Q9STR4 LEU 103 ENGINEERED MUTATION
SEQADV 7DLY GLU B 104 UNP Q9STR4 LYS 104 ENGINEERED MUTATION
SEQRES 1 A 447 MET GLY LEU PRO LEU MET MET GLU ARG SER SER ASN ASN
SEQRES 2 A 447 ASN ASN VAL GLU LEU SER ARG VAL ALA VAL SER ASP THR
SEQRES 3 A 447 HIS GLY GLU ASP SER PRO TYR PHE ALA GLY TRP LYS ALA
SEQRES 4 A 447 TYR ASP GLU ASN PRO TYR ASP GLU SER HIS ASN PRO SER
SEQRES 5 A 447 GLY VAL ILE GLN MET GLY LEU ALA GLU ASN GLN VAL SER
SEQRES 6 A 447 PHE ASP LEU LEU GLU THR TYR LEU GLU LYS LYS ASN PRO
SEQRES 7 A 447 GLU GLY SER MET TRP GLY SER LYS GLY ALA PRO GLY PHE
SEQRES 8 A 447 ARG GLU ASN ALA LEU TYR GLY ASN PHE ARG GLY GLY GLU
SEQRES 9 A 447 THR PHE ARG GLN ALA MET ALA SER PHE MET GLU GLN ILE
SEQRES 10 A 447 ARG GLY GLY LYS ALA ARG PHE ASP PRO ASP ARG ILE VAL
SEQRES 11 A 447 LEU THR ALA GLY ALA THR ALA ALA ASN GLU LEU LEU THR
SEQRES 12 A 447 PHE ILE LEU ALA ASP PRO ASN ASP ALA LEU LEU VAL PRO
SEQRES 13 A 447 THR PRO TYR TYR PRO GLY PHE ASP ARG ASP LEU ARG TRP
SEQRES 14 A 447 ARG THR GLY VAL LYS ILE VAL PRO ILE HIS CYS ASP SER
SEQRES 15 A 447 SER ASN HIS PHE GLN ILE THR PRO GLU ALA LEU GLU SER
SEQRES 16 A 447 ALA TYR GLN THR ALA ARG ASP ALA ASN ILE ARG VAL ARG
SEQRES 17 A 447 GLY VAL LEU ILE THR ASN PRO SER ASN PRO LEU GLY ALA
SEQRES 18 A 447 THR VAL GLN LYS LYS VAL LEU GLU ASP LEU LEU ASP PHE
SEQRES 19 A 447 CYS VAL ARG LYS ASN ILE HIS LEU VAL SER ASP GLU ILE
SEQRES 20 A 447 TYR SER GLY SER VAL PHE HIS ALA SER GLU PHE THR SER
SEQRES 21 A 447 VAL ALA GLU ILE VAL GLU ASN ILE ASP ASP VAL SER VAL
SEQRES 22 A 447 LYS GLU ARG VAL HIS ILE VAL TYR SER LEU SER LYS ASP
SEQRES 23 A 447 LEU GLY LEU PRO GLY PHE ARG VAL GLY THR ILE TYR SER
SEQRES 24 A 447 TYR ASN ASP ASN VAL VAL ARG THR ALA ARG ARG MET SER
SEQRES 25 A 447 SER PHE THR LEU VAL SER SER GLN THR GLN HIS MET LEU
SEQRES 26 A 447 ALA SER MET LEU SER ASP GLU GLU PHE THR GLU LYS TYR
SEQRES 27 A 447 ILE ARG ILE ASN ARG GLU ARG LEU ARG ARG ARG TYR ASP
SEQRES 28 A 447 THR ILE VAL GLU GLY LEU LYS LYS ALA GLY ILE GLU CYS
SEQRES 29 A 447 LEU LYS GLY ASN ALA GLY LEU PHE CYS TRP MET ASN LEU
SEQRES 30 A 447 GLY PHE LEU LEU GLU LYS LYS THR LYS ASP GLY GLU LEU
SEQRES 31 A 447 GLN LEU TRP ASP VAL ILE LEU LYS GLU LEU ASN LEU ASN
SEQRES 32 A 447 ILE SER PRO GLY SER SER CYS HIS CYS SER GLU VAL GLY
SEQRES 33 A 447 TRP PHE ARG VAL CYS PHE ALA ASN MET SER GLU ASN THR
SEQRES 34 A 447 LEU GLU ILE ALA LEU LYS ARG ILE HIS GLU PHE MET ASP
SEQRES 35 A 447 ARG ARG ARG ARG PHE
SEQRES 1 B 447 MET GLY LEU PRO LEU MET MET GLU ARG SER SER ASN ASN
SEQRES 2 B 447 ASN ASN VAL GLU LEU SER ARG VAL ALA VAL SER ASP THR
SEQRES 3 B 447 HIS GLY GLU ASP SER PRO TYR PHE ALA GLY TRP LYS ALA
SEQRES 4 B 447 TYR ASP GLU ASN PRO TYR ASP GLU SER HIS ASN PRO SER
SEQRES 5 B 447 GLY VAL ILE GLN MET GLY LEU ALA GLU ASN GLN VAL SER
SEQRES 6 B 447 PHE ASP LEU LEU GLU THR TYR LEU GLU LYS LYS ASN PRO
SEQRES 7 B 447 GLU GLY SER MET TRP GLY SER LYS GLY ALA PRO GLY PHE
SEQRES 8 B 447 ARG GLU ASN ALA LEU TYR GLY ASN PHE ARG GLY GLY GLU
SEQRES 9 B 447 THR PHE ARG GLN ALA MET ALA SER PHE MET GLU GLN ILE
SEQRES 10 B 447 ARG GLY GLY LYS ALA ARG PHE ASP PRO ASP ARG ILE VAL
SEQRES 11 B 447 LEU THR ALA GLY ALA THR ALA ALA ASN GLU LEU LEU THR
SEQRES 12 B 447 PHE ILE LEU ALA ASP PRO ASN ASP ALA LEU LEU VAL PRO
SEQRES 13 B 447 THR PRO TYR TYR PRO GLY PHE ASP ARG ASP LEU ARG TRP
SEQRES 14 B 447 ARG THR GLY VAL LYS ILE VAL PRO ILE HIS CYS ASP SER
SEQRES 15 B 447 SER ASN HIS PHE GLN ILE THR PRO GLU ALA LEU GLU SER
SEQRES 16 B 447 ALA TYR GLN THR ALA ARG ASP ALA ASN ILE ARG VAL ARG
SEQRES 17 B 447 GLY VAL LEU ILE THR ASN PRO SER ASN PRO LEU GLY ALA
SEQRES 18 B 447 THR VAL GLN LYS LYS VAL LEU GLU ASP LEU LEU ASP PHE
SEQRES 19 B 447 CYS VAL ARG LYS ASN ILE HIS LEU VAL SER ASP GLU ILE
SEQRES 20 B 447 TYR SER GLY SER VAL PHE HIS ALA SER GLU PHE THR SER
SEQRES 21 B 447 VAL ALA GLU ILE VAL GLU ASN ILE ASP ASP VAL SER VAL
SEQRES 22 B 447 LYS GLU ARG VAL HIS ILE VAL TYR SER LEU SER LYS ASP
SEQRES 23 B 447 LEU GLY LEU PRO GLY PHE ARG VAL GLY THR ILE TYR SER
SEQRES 24 B 447 TYR ASN ASP ASN VAL VAL ARG THR ALA ARG ARG MET SER
SEQRES 25 B 447 SER PHE THR LEU VAL SER SER GLN THR GLN HIS MET LEU
SEQRES 26 B 447 ALA SER MET LEU SER ASP GLU GLU PHE THR GLU LYS TYR
SEQRES 27 B 447 ILE ARG ILE ASN ARG GLU ARG LEU ARG ARG ARG TYR ASP
SEQRES 28 B 447 THR ILE VAL GLU GLY LEU LYS LYS ALA GLY ILE GLU CYS
SEQRES 29 B 447 LEU LYS GLY ASN ALA GLY LEU PHE CYS TRP MET ASN LEU
SEQRES 30 B 447 GLY PHE LEU LEU GLU LYS LYS THR LYS ASP GLY GLU LEU
SEQRES 31 B 447 GLN LEU TRP ASP VAL ILE LEU LYS GLU LEU ASN LEU ASN
SEQRES 32 B 447 ILE SER PRO GLY SER SER CYS HIS CYS SER GLU VAL GLY
SEQRES 33 B 447 TRP PHE ARG VAL CYS PHE ALA ASN MET SER GLU ASN THR
SEQRES 34 B 447 LEU GLU ILE ALA LEU LYS ARG ILE HIS GLU PHE MET ASP
SEQRES 35 B 447 ARG ARG ARG ARG PHE
HET PPG A1001 26
HET PPG B1001 26
HETNAM PPG (2E,3E)-4-(2-AMINOETHOXY)-2-[({3-HYDROXY-2-METHYL-5-
HETNAM 2 PPG [(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)IMINO]BUT-3-
HETNAM 3 PPG ENOIC ACID
FORMUL 3 PPG 2(C14 H20 N3 O8 P)
HELIX 1 AA1 SER A 31 ASN A 43 1 13
HELIX 2 AA2 SER A 65 GLU A 74 1 10
HELIX 3 AA3 PHE A 106 GLY A 119 1 14
HELIX 4 AA4 GLY A 134 ALA A 147 1 14
HELIX 5 AA5 GLY A 162 LEU A 167 1 6
HELIX 6 AA6 ASP A 181 HIS A 185 5 5
HELIX 7 AA7 THR A 189 ALA A 203 1 15
HELIX 8 AA8 GLN A 224 ASN A 239 1 16
HELIX 9 AA9 HIS A 254 PHE A 258 5 5
HELIX 10 AB1 ASP A 270 GLU A 275 1 6
HELIX 11 AB2 LEU A 283 LEU A 287 1 5
HELIX 12 AB3 ASN A 301 SER A 313 1 13
HELIX 13 AB4 PHE A 314 LEU A 316 5 3
HELIX 14 AB5 SER A 318 ASP A 331 1 14
HELIX 15 AB6 ASP A 331 LYS A 359 1 29
HELIX 16 AB7 GLY A 378 LEU A 381 5 4
HELIX 17 AB8 THR A 385 GLU A 399 1 15
HELIX 18 AB9 SER A 426 ASP A 442 1 17
HELIX 19 AC1 SER B 31 ASN B 43 1 13
HELIX 20 AC2 SER B 65 THR B 71 1 7
HELIX 21 AC3 PHE B 106 GLY B 119 1 14
HELIX 22 AC4 ASP B 125 ASP B 127 5 3
HELIX 23 AC5 GLY B 134 ALA B 147 1 14
HELIX 24 AC6 GLY B 162 LEU B 167 1 6
HELIX 25 AC7 ASP B 181 HIS B 185 5 5
HELIX 26 AC8 THR B 189 ALA B 203 1 15
HELIX 27 AC9 GLN B 224 ASN B 239 1 16
HELIX 28 AD1 HIS B 254 PHE B 258 5 5
HELIX 29 AD2 ASP B 270 GLU B 275 1 6
HELIX 30 AD3 LEU B 283 LEU B 287 1 5
HELIX 31 AD4 LEU B 289 ARG B 293 5 5
HELIX 32 AD5 ASN B 301 SER B 313 1 13
HELIX 33 AD6 PHE B 314 LEU B 316 5 3
HELIX 34 AD7 SER B 318 ASP B 331 1 14
HELIX 35 AD8 ASP B 331 LYS B 359 1 29
HELIX 36 AD9 GLY B 378 LEU B 381 5 4
HELIX 37 AE1 THR B 385 GLU B 399 1 15
HELIX 38 AE2 SER B 426 ASP B 442 1 17
SHEET 1 AA1 4 ILE A 55 MET A 57 0
SHEET 2 AA1 4 LEU A 402 PRO A 406 1 O ASN A 403 N ILE A 55
SHEET 3 AA1 4 TRP A 417 CYS A 421 -1 O ARG A 419 N SER A 405
SHEET 4 AA1 4 PHE A 372 ASN A 376 -1 N CYS A 373 O VAL A 420
SHEET 1 AA2 7 ILE A 129 THR A 132 0
SHEET 2 AA2 7 GLY A 295 SER A 299 -1 O GLY A 295 N THR A 132
SHEET 3 AA2 7 VAL A 277 SER A 282 -1 N ILE A 279 O TYR A 298
SHEET 4 AA2 7 HIS A 241 ASP A 245 1 N SER A 244 O HIS A 278
SHEET 5 AA2 7 VAL A 207 THR A 213 1 N VAL A 210 O VAL A 243
SHEET 6 AA2 7 ALA A 152 PRO A 156 1 N LEU A 154 O LEU A 211
SHEET 7 AA2 7 LYS A 174 ILE A 178 1 O VAL A 176 N LEU A 153
SHEET 1 AA3 4 ILE B 55 MET B 57 0
SHEET 2 AA3 4 LEU B 402 PRO B 406 1 O ASN B 403 N ILE B 55
SHEET 3 AA3 4 TRP B 417 CYS B 421 -1 O ARG B 419 N SER B 405
SHEET 4 AA3 4 PHE B 372 ASN B 376 -1 N CYS B 373 O VAL B 420
SHEET 1 AA4 7 ILE B 129 THR B 132 0
SHEET 2 AA4 7 GLY B 295 SER B 299 -1 O GLY B 295 N THR B 132
SHEET 3 AA4 7 VAL B 277 SER B 282 -1 N ILE B 279 O TYR B 298
SHEET 4 AA4 7 HIS B 241 ASP B 245 1 N SER B 244 O HIS B 278
SHEET 5 AA4 7 VAL B 207 THR B 213 1 N VAL B 210 O VAL B 243
SHEET 6 AA4 7 ALA B 152 PRO B 156 1 N LEU B 154 O LEU B 211
SHEET 7 AA4 7 LYS B 174 ILE B 178 1 O VAL B 176 N LEU B 153
CISPEP 1 THR A 157 PRO A 158 0 -4.86
CISPEP 2 ASN A 214 PRO A 215 0 6.49
CISPEP 3 ASN A 217 PRO A 218 0 13.78
CISPEP 4 THR B 157 PRO B 158 0 -4.58
CISPEP 5 ASN B 214 PRO B 215 0 4.25
CISPEP 6 ASN B 217 PRO B 218 0 13.15
SITE 1 AC1 18 TYR A 33 LEU A 59 ALA A 60 GLU A 61
SITE 2 AC1 18 GLY A 134 ALA A 135 THR A 136 TYR A 160
SITE 3 AC1 18 THR A 213 ASN A 217 ASP A 245 ILE A 247
SITE 4 AC1 18 TYR A 248 SER A 282 SER A 284 LYS A 285
SITE 5 AC1 18 ARG A 293 ARG A 419
SITE 1 AC2 16 TYR B 33 ALA B 60 GLU B 61 ALA B 135
SITE 2 AC2 16 THR B 136 TYR B 160 THR B 213 ASN B 217
SITE 3 AC2 16 ASP B 245 ILE B 247 TYR B 248 SER B 282
SITE 4 AC2 16 SER B 284 LYS B 285 ARG B 293 ARG B 419
CRYST1 164.425 164.425 97.881 90.00 90.00 120.00 H 3 18
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006082 0.003511 0.000000 0.00000
SCALE2 0.000000 0.007023 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010216 0.00000