HEADER HYDROLASE 09-DEC-20 7DNC TITLE CRYSTAL STRUCTURE OF EV71 3C PROTEINASE IN COMPLEX WITH A NOVEL TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3C PROTEASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN 3B,VIRAL PROTEIN GENOME-LINKED; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS 71; SOURCE 3 ORGANISM_COMMON: EV71; SOURCE 4 ORGANISM_TAXID: 39054; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS 3CPRO, INHIBITOR, COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.XIE,H.X.SU,M.J.LI,Y.C.XU REVDAT 4 13-NOV-24 7DNC 1 REMARK REVDAT 3 29-NOV-23 7DNC 1 REMARK REVDAT 2 09-MAR-22 7DNC 1 JRNL REVDAT 1 05-MAY-21 7DNC 0 JRNL AUTH W.DAI,D.JOCHMANS,H.XIE,H.YANG,J.LI,H.SU,D.CHANG,J.WANG, JRNL AUTH 2 J.PENG,L.ZHU,Y.NIAN,R.HILGENFELD,H.JIANG,K.CHEN,L.ZHANG, JRNL AUTH 3 Y.XU,J.NEYTS,H.LIU JRNL TITL DESIGN, SYNTHESIS, AND BIOLOGICAL EVALUATION OF JRNL TITL 2 PEPTIDOMIMETIC ALDEHYDES AS BROAD-SPECTRUM INHIBITORS JRNL TITL 3 AGAINST ENTEROVIRUS AND SARS-COV-2. JRNL REF J.MED.CHEM. V. 65 2794 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 33872498 JRNL DOI 10.1021/ACS.JMEDCHEM.0C02258 REMARK 2 REMARK 2 RESOLUTION. 1.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1-3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 59470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 3041 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.5800 - 3.2700 1.00 2694 144 0.1667 0.1705 REMARK 3 2 3.2700 - 2.6000 1.00 2605 159 0.1838 0.1878 REMARK 3 3 2.5900 - 2.2700 1.00 2610 140 0.1770 0.1943 REMARK 3 4 2.2700 - 2.0600 1.00 2605 138 0.1692 0.1663 REMARK 3 5 2.0600 - 1.9100 1.00 2584 140 0.1725 0.1629 REMARK 3 6 1.9100 - 1.8000 1.00 2574 154 0.1750 0.1768 REMARK 3 7 1.8000 - 1.7100 1.00 2588 137 0.1798 0.2061 REMARK 3 8 1.7100 - 1.6400 1.00 2599 122 0.1792 0.2028 REMARK 3 9 1.6400 - 1.5700 1.00 2617 118 0.1762 0.1887 REMARK 3 10 1.5700 - 1.5200 1.00 2528 166 0.1836 0.2018 REMARK 3 11 1.5200 - 1.4700 1.00 2559 147 0.1828 0.1834 REMARK 3 12 1.4700 - 1.4300 1.00 2585 130 0.1880 0.1744 REMARK 3 13 1.4300 - 1.3900 0.99 2552 138 0.1942 0.2146 REMARK 3 14 1.3900 - 1.3600 0.99 2546 140 0.1945 0.1972 REMARK 3 15 1.3600 - 1.3300 1.00 2588 117 0.1969 0.1966 REMARK 3 16 1.3300 - 1.3000 0.98 2535 122 0.2068 0.2495 REMARK 3 17 1.3000 - 1.2700 1.00 2577 141 0.2171 0.2229 REMARK 3 18 1.2700 - 1.2500 0.98 2532 118 0.2234 0.2115 REMARK 3 19 1.2500 - 1.2300 1.00 2548 133 0.2221 0.2101 REMARK 3 20 1.2300 - 1.2100 0.98 2504 138 0.2308 0.2739 REMARK 3 21 1.2100 - 1.1900 0.97 2461 154 0.2392 0.2418 REMARK 3 22 1.1900 - 1.1700 0.96 2438 145 0.2469 0.2972 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.1194 15.4837 9.8608 REMARK 3 T TENSOR REMARK 3 T11: 0.2902 T22: 0.1399 REMARK 3 T33: 0.1443 T12: 0.0294 REMARK 3 T13: 0.0562 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 7.4126 L22: 6.0791 REMARK 3 L33: 8.6645 L12: 1.0323 REMARK 3 L13: 4.5791 L23: 0.3895 REMARK 3 S TENSOR REMARK 3 S11: 0.1510 S12: -0.3126 S13: -0.1257 REMARK 3 S21: 0.5490 S22: 0.1711 S23: 0.2977 REMARK 3 S31: 0.4764 S32: -0.1308 S33: -0.2611 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9991 18.5765 -5.9361 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.1201 REMARK 3 T33: 0.1258 T12: -0.0121 REMARK 3 T13: -0.0077 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 2.3770 L22: 3.7615 REMARK 3 L33: 3.8735 L12: -0.3484 REMARK 3 L13: -0.3750 L23: 0.4912 REMARK 3 S TENSOR REMARK 3 S11: -0.0261 S12: 0.1622 S13: -0.0262 REMARK 3 S21: -0.1097 S22: 0.0199 S23: 0.1780 REMARK 3 S31: 0.2842 S32: -0.1569 S33: 0.0184 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.7491 21.7063 -9.5466 REMARK 3 T TENSOR REMARK 3 T11: 0.1285 T22: 0.1263 REMARK 3 T33: 0.1536 T12: 0.0197 REMARK 3 T13: -0.0225 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 3.5093 L22: 3.8020 REMARK 3 L33: 3.8813 L12: 0.6257 REMARK 3 L13: -0.1069 L23: 0.2992 REMARK 3 S TENSOR REMARK 3 S11: 0.0749 S12: 0.1517 S13: -0.1393 REMARK 3 S21: -0.3116 S22: -0.0568 S23: 0.3191 REMARK 3 S31: 0.0276 S32: -0.1983 S33: -0.0133 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.4137 25.3504 -10.8581 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.1718 REMARK 3 T33: 0.1251 T12: 0.0163 REMARK 3 T13: -0.0174 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 6.4409 L22: 7.6203 REMARK 3 L33: 1.5467 L12: 0.9509 REMARK 3 L13: 0.7260 L23: 0.8806 REMARK 3 S TENSOR REMARK 3 S11: 0.0526 S12: 0.1994 S13: 0.2043 REMARK 3 S21: -0.0529 S22: 0.0398 S23: 0.6947 REMARK 3 S31: -0.0196 S32: -0.1810 S33: -0.0816 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.5797 33.6820 -8.3118 REMARK 3 T TENSOR REMARK 3 T11: 0.1157 T22: 0.0939 REMARK 3 T33: 0.1417 T12: 0.0230 REMARK 3 T13: 0.0082 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 2.9171 L22: 2.7762 REMARK 3 L33: 1.8917 L12: 0.1773 REMARK 3 L13: 0.2414 L23: -0.2086 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: -0.0954 S13: 0.3312 REMARK 3 S21: 0.0072 S22: -0.0453 S23: -0.0751 REMARK 3 S31: -0.1111 S32: 0.0316 S33: 0.0358 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.3828 24.3995 3.8969 REMARK 3 T TENSOR REMARK 3 T11: 0.2199 T22: 0.3621 REMARK 3 T33: 0.2014 T12: -0.0840 REMARK 3 T13: 0.0508 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 6.0875 L22: 2.4785 REMARK 3 L33: 2.0462 L12: 2.6443 REMARK 3 L13: 8.0580 L23: 3.1746 REMARK 3 S TENSOR REMARK 3 S11: 0.3983 S12: -0.8714 S13: -0.1114 REMARK 3 S21: 0.3533 S22: -0.2534 S23: 0.3304 REMARK 3 S31: 0.2238 S32: -0.8981 S33: -0.1486 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5585 30.8503 7.4099 REMARK 3 T TENSOR REMARK 3 T11: 0.2283 T22: 0.1627 REMARK 3 T33: 0.1239 T12: -0.0588 REMARK 3 T13: 0.0273 T23: -0.0642 REMARK 3 L TENSOR REMARK 3 L11: 8.0069 L22: 4.6343 REMARK 3 L33: 4.5602 L12: 1.1565 REMARK 3 L13: 0.2374 L23: -1.1571 REMARK 3 S TENSOR REMARK 3 S11: 0.2053 S12: -0.5588 S13: 0.8507 REMARK 3 S21: 0.4587 S22: -0.1121 S23: -0.1274 REMARK 3 S31: -0.0619 S32: 0.0974 S33: -0.0878 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1085 12.3297 -1.5179 REMARK 3 T TENSOR REMARK 3 T11: 0.1323 T22: 0.0974 REMARK 3 T33: 0.1222 T12: -0.0085 REMARK 3 T13: 0.0108 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 5.2426 L22: 4.9352 REMARK 3 L33: 3.5157 L12: 1.6609 REMARK 3 L13: 0.1048 L23: 0.6656 REMARK 3 S TENSOR REMARK 3 S11: -0.1758 S12: 0.2595 S13: -0.2930 REMARK 3 S21: -0.0872 S22: 0.0825 S23: 0.0014 REMARK 3 S31: 0.2670 S32: 0.0059 S33: 0.0956 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3773 21.2372 2.4875 REMARK 3 T TENSOR REMARK 3 T11: 0.1495 T22: 0.1540 REMARK 3 T33: 0.1459 T12: -0.0038 REMARK 3 T13: -0.0326 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 3.2906 L22: 6.7792 REMARK 3 L33: 1.1866 L12: 4.0815 REMARK 3 L13: -1.7514 L23: -2.2318 REMARK 3 S TENSOR REMARK 3 S11: 0.1909 S12: -0.2510 S13: -0.3314 REMARK 3 S21: 0.2205 S22: -0.3116 S23: -0.4294 REMARK 3 S31: 0.0467 S32: 0.1999 S33: 0.1155 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4010 30.8969 -8.2007 REMARK 3 T TENSOR REMARK 3 T11: 0.1205 T22: 0.1337 REMARK 3 T33: 0.1571 T12: -0.0073 REMARK 3 T13: -0.0016 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 2.7522 L22: 3.9072 REMARK 3 L33: 3.4297 L12: -0.2436 REMARK 3 L13: -2.1335 L23: 1.2999 REMARK 3 S TENSOR REMARK 3 S11: 0.1470 S12: 0.2598 S13: 0.1851 REMARK 3 S21: -0.2954 S22: -0.0662 S23: 0.0133 REMARK 3 S31: -0.3647 S32: -0.1167 S33: -0.0962 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8621 16.4230 -4.5032 REMARK 3 T TENSOR REMARK 3 T11: 0.1631 T22: 0.1338 REMARK 3 T33: 0.1735 T12: 0.0147 REMARK 3 T13: 0.0147 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 2.0183 L22: 1.1016 REMARK 3 L33: 2.8720 L12: 0.4718 REMARK 3 L13: 2.8603 L23: -0.2373 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: 0.1429 S13: -0.3256 REMARK 3 S21: 0.0574 S22: 0.0270 S23: -0.1420 REMARK 3 S31: 0.2098 S32: 0.2104 S33: 0.0061 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7570 26.5218 0.0587 REMARK 3 T TENSOR REMARK 3 T11: 0.1219 T22: 0.0934 REMARK 3 T33: 0.1129 T12: -0.0222 REMARK 3 T13: -0.0001 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 3.3496 L22: 1.8706 REMARK 3 L33: 2.6718 L12: -0.2551 REMARK 3 L13: -1.1678 L23: 0.4170 REMARK 3 S TENSOR REMARK 3 S11: 0.1284 S12: -0.1951 S13: 0.1868 REMARK 3 S21: 0.1315 S22: -0.0463 S23: -0.0535 REMARK 3 S31: -0.1138 S32: 0.0103 S33: -0.0650 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7DNC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1300019792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59502 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.170 REMARK 200 RESOLUTION RANGE LOW (A) : 31.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 19.00 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 14.50 REMARK 200 R MERGE FOR SHELL (I) : 0.87400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 4GHT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES MONOHYDRATE (PH 6.0), 20% 2 REMARK 280 -PROPANOL, 20% POLYETHYLENE GLYCOL MONOMETHYL ETHER 2000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.71133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 11.35567 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 22.71133 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.35567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 391 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 405 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 GLU A 182 REMARK 465 GLN A 183 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 GLN A 121 CG CD OE1 NE2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 32 -123.30 50.48 REMARK 500 TYR A 122 -61.56 -125.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 630 REMARK 630 MOLECULE TYPE: NULL REMARK 630 MOLECULE NAME: ~{N}-[(2~{S})-3-CYCLOHEXYL-1-OXIDANYLIDENE-1-[[(2~{ REMARK 630 S})-1-OXIDANYLIDENE-3-[(3~{S})-2-OXIDANYLIDENEPYRROLIDIN-3-YL] REMARK 630 PROPAN-2-YL]AMINO]PROPAN-2-YL]-1~{H}-INDOLE-2-CARBOXAMIDE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 FHR A 201 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: ICB ALC ELL REMARK 630 DETAILS: NULL DBREF 7DNC A 1 183 UNP B8YLW0 B8YLW0_HE71 1 183 SEQADV 7DNC PRO A 43 UNP B8YLW0 ARG 43 CONFLICT SEQADV 7DNC VAL A 49 UNP B8YLW0 ILE 49 CONFLICT SEQADV 7DNC SER A 55 UNP B8YLW0 ASN 55 CONFLICT SEQRES 1 A 183 GLY PRO SER LEU ASP PHE ALA LEU SER LEU LEU ARG ARG SEQRES 2 A 183 ASN ILE ARG GLN VAL GLN THR ASP GLN GLY HIS PHE THR SEQRES 3 A 183 MET LEU GLY VAL ARG ASP ARG LEU ALA VAL LEU PRO ARG SEQRES 4 A 183 HIS SER GLN PRO GLY LYS THR ILE TRP VAL GLU HIS LYS SEQRES 5 A 183 LEU VAL SER VAL LEU ASP ALA VAL GLU LEU VAL ASP GLU SEQRES 6 A 183 GLN GLY VAL ASN LEU GLU LEU THR LEU ILE THR LEU ASP SEQRES 7 A 183 THR ASN GLU LYS PHE ARG ASP ILE THR LYS PHE ILE PRO SEQRES 8 A 183 GLU ASN ILE SER THR ALA SER ASP ALA THR LEU VAL ILE SEQRES 9 A 183 ASN THR GLU HIS MET PRO SER MET PHE VAL PRO VAL GLY SEQRES 10 A 183 ASP VAL VAL GLN TYR GLY PHE LEU ASN LEU SER GLY LYS SEQRES 11 A 183 PRO THR HIS ARG THR MET MET TYR ASN PHE PRO THR LYS SEQRES 12 A 183 ALA GLY GLN CYS GLY GLY VAL VAL THR SER VAL GLY LYS SEQRES 13 A 183 VAL VAL GLY ILE HIS ILE GLY GLY ASN GLY ARG GLN GLY SEQRES 14 A 183 PHE CYS ALA GLY LEU LYS ARG SER TYR PHE ALA SER GLU SEQRES 15 A 183 GLN HET FHR A 201 33 HETNAM FHR ~{N}-[(2~{S})-3-CYCLOHEXYL-1-OXIDANYLIDENE-1-[[(2~{S})- HETNAM 2 FHR 1-OXIDANYLIDENE-3-[(3~{S})-2-OXIDANYLIDENEPYRROLIDIN- HETNAM 3 FHR 3-YL]PROPAN-2-YL]AMINO]PROPAN-2-YL]-1~{H}-INDOLE-2- HETNAM 4 FHR CARBOXAMIDE FORMUL 2 FHR C25 H32 N4 O4 FORMUL 3 HOH *138(H2 O) HELIX 1 AA1 LEU A 4 ASN A 14 1 11 HELIX 2 AA2 HIS A 40 GLN A 42 5 3 HELIX 3 AA3 ILE A 86 ILE A 90 5 5 HELIX 4 AA4 LYS A 175 ALA A 180 5 6 SHEET 1 AA1 7 ILE A 15 THR A 20 0 SHEET 2 AA1 7 GLY A 23 ARG A 31 -1 O MET A 27 N ARG A 16 SHEET 3 AA1 7 LEU A 34 PRO A 38 -1 O LEU A 34 N ARG A 31 SHEET 4 AA1 7 ASN A 69 LEU A 77 -1 O THR A 73 N LEU A 37 SHEET 5 AA1 7 LYS A 52 VAL A 63 -1 N LEU A 57 O THR A 76 SHEET 6 AA1 7 THR A 46 VAL A 49 -1 N VAL A 49 O LYS A 52 SHEET 7 AA1 7 ILE A 15 THR A 20 -1 N GLN A 19 O TRP A 48 SHEET 1 AA2 7 ALA A 97 ILE A 104 0 SHEET 2 AA2 7 MET A 112 LEU A 127 -1 O VAL A 119 N ALA A 97 SHEET 3 AA2 7 LYS A 130 TYR A 138 -1 O THR A 132 N LEU A 125 SHEET 4 AA2 7 GLY A 169 GLY A 173 -1 O GLY A 169 N TYR A 138 SHEET 5 AA2 7 LYS A 156 GLY A 164 -1 N ILE A 160 O ALA A 172 SHEET 6 AA2 7 VAL A 150 SER A 153 -1 N VAL A 151 O GLY A 159 SHEET 7 AA2 7 ALA A 97 ILE A 104 -1 N VAL A 103 O VAL A 150 LINK SG CYS A 147 C31 FHR A 201 1555 1555 1.78 CRYST1 95.034 95.034 34.067 90.00 90.00 120.00 P 62 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010523 0.006075 0.000000 0.00000 SCALE2 0.000000 0.012150 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029354 0.00000