data_7DOU
# 
_entry.id   7DOU 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.392 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   7DOU         pdb_00007dou 10.2210/pdb7dou/pdb 
WWPDB D_1300019860 ?            ?                   
EMDB  EMD-30800    ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2021-10-27 
2 'Structure model' 1 1 2022-02-23 
3 'Structure model' 1 2 2024-06-05 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Database references' 
2 3 'Structure model' 'Data collection'     
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 2 'Structure model' citation       
2 3 'Structure model' chem_comp_atom 
3 3 'Structure model' chem_comp_bond 
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 2 'Structure model' '_citation.journal_volume' 
2 2 'Structure model' '_citation.page_first'     
3 2 'Structure model' '_citation.year'           
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.entry_id                        7DOU 
_pdbx_database_status.recvd_initial_deposition_date   2020-12-17 
_pdbx_database_status.SG_entry                        N 
_pdbx_database_status.deposit_site                    PDBJ 
_pdbx_database_status.process_site                    PDBJ 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.details 
_pdbx_database_related.db_id 
_pdbx_database_related.content_type 
EMDB 'Capsid structure of the closely related H. pylori phage KHP30'                EMD-30778 'other EM volume'      
EMDB 'Trimeric cement protein structure of Helicobacter pylori bacteriophage KHP40' EMD-30800 'associated EM volume' 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
_audit_author.identifier_ORCID 
'Kamiya, R.'    1 ?                   
'Uchiyama, J.'  2 ?                   
'Matsuzaki, S.' 3 ?                   
'Murata, K.'    4 ?                   
'Iwasaki, K.'   5 ?                   
'Miyazaki, N.'  6 0000-0002-4880-7300 
# 
_citation.abstract                  ? 
_citation.abstract_id_CAS           ? 
_citation.book_id_ISBN              ? 
_citation.book_publisher            ? 
_citation.book_publisher_city       ? 
_citation.book_title                ? 
_citation.coordinate_linkage        ? 
_citation.country                   UK 
_citation.database_id_Medline       ? 
_citation.details                   ? 
_citation.id                        primary 
_citation.journal_abbrev            Structure 
_citation.journal_id_ASTM           STRUE6 
_citation.journal_id_CSD            2005 
_citation.journal_id_ISSN           0969-2126 
_citation.journal_full              ? 
_citation.journal_issue             ? 
_citation.journal_volume            30 
_citation.language                  ? 
_citation.page_first                300 
_citation.page_last                 ? 
_citation.title                     
'Acid-stable capsid structure of Helicobacter pylori bacteriophage KHP30 by single-particle cryoelectron microscopy.' 
_citation.year                      2022 
_citation.database_id_CSD           ? 
_citation.pdbx_database_id_DOI      10.1016/j.str.2021.09.001 
_citation.pdbx_database_id_PubMed   34597601 
_citation.unpublished_flag          ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Kamiya, R.'    1 ? 
primary 'Uchiyama, J.'  2 ? 
primary 'Matsuzaki, S.' 3 ? 
primary 'Murata, K.'    4 ? 
primary 'Iwasaki, K.'   5 ? 
primary 'Miyazaki, N.'  6 ? 
# 
_entity.id                         1 
_entity.type                       polymer 
_entity.src_method                 nat 
_entity.pdbx_description           'Cement protein gp16' 
_entity.formula_weight             13469.469 
_entity.pdbx_number_of_molecules   3 
_entity.pdbx_ec                    ? 
_entity.pdbx_mutation              ? 
_entity.pdbx_fragment              ? 
_entity.details                    ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           'polypeptide(L)' 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       
;MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKD
YTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
;
_entity_poly.pdbx_seq_one_letter_code_can   
;MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKD
YTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
;
_entity_poly.pdbx_strand_id                 4,5,6 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1   MET n 
1 2   LYS n 
1 3   GLN n 
1 4   LYS n 
1 5   VAL n 
1 6   HIS n 
1 7   SER n 
1 8   VAL n 
1 9   SER n 
1 10  TYR n 
1 11  LEU n 
1 12  ALA n 
1 13  LYS n 
1 14  ALA n 
1 15  GLU n 
1 16  PHE n 
1 17  GLU n 
1 18  TYR n 
1 19  LYS n 
1 20  ASN n 
1 21  GLY n 
1 22  VAL n 
1 23  TYR n 
1 24  ASP n 
1 25  LEU n 
1 26  VAL n 
1 27  ALA n 
1 28  LEU n 
1 29  PRO n 
1 30  THR n 
1 31  GLY n 
1 32  ALA n 
1 33  GLU n 
1 34  VAL n 
1 35  ILE n 
1 36  LYS n 
1 37  ILE n 
1 38  SER n 
1 39  LEU n 
1 40  GLU n 
1 41  VAL n 
1 42  VAL n 
1 43  GLY n 
1 44  LEU n 
1 45  PRO n 
1 46  THR n 
1 47  ALA n 
1 48  GLY n 
1 49  HIS n 
1 50  VAL n 
1 51  SER n 
1 52  VAL n 
1 53  GLY n 
1 54  PHE n 
1 55  LYS n 
1 56  ASP n 
1 57  GLU n 
1 58  SER n 
1 59  LYS n 
1 60  LYS n 
1 61  ASN n 
1 62  TYR n 
1 63  SER n 
1 64  SER n 
1 65  ILE n 
1 66  LEU n 
1 67  THR n 
1 68  LEU n 
1 69  PRO n 
1 70  VAL n 
1 71  ASN n 
1 72  GLU n 
1 73  THR n 
1 74  SER n 
1 75  GLY n 
1 76  VAL n 
1 77  VAL n 
1 78  THR n 
1 79  LYS n 
1 80  ASP n 
1 81  TYR n 
1 82  THR n 
1 83  VAL n 
1 84  LYS n 
1 85  SER n 
1 86  ASP n 
1 87  LYS n 
1 88  ILE n 
1 89  VAL n 
1 90  ALA n 
1 91  ALA n 
1 92  GLU n 
1 93  VAL n 
1 94  LYS n 
1 95  ASP n 
1 96  ALA n 
1 97  LEU n 
1 98  ALA n 
1 99  GLU n 
1 100 GLY n 
1 101 SER n 
1 102 ASP n 
1 103 GLY n 
1 104 ARG n 
1 105 PRO n 
1 106 VAL n 
1 107 LYS n 
1 108 CYS n 
1 109 VAL n 
1 110 LEU n 
1 111 ARG n 
1 112 ALA n 
1 113 LEU n 
1 114 TYR n 
1 115 PHE n 
1 116 LEU n 
1 117 PRO n 
1 118 SER n 
1 119 VAL n 
1 120 ILE n 
1 121 GLU n 
1 122 VAL n 
1 123 GLU n 
1 124 TYR n 
# 
_entity_src_nat.entity_id                  1 
_entity_src_nat.pdbx_src_id                1 
_entity_src_nat.pdbx_alt_source_flag       sample 
_entity_src_nat.pdbx_beg_seq_num           1 
_entity_src_nat.pdbx_end_seq_num           124 
_entity_src_nat.common_name                ? 
_entity_src_nat.pdbx_organism_scientific   'Helicobacter phage KHP40' 
_entity_src_nat.pdbx_ncbi_taxonomy_id      1204178 
_entity_src_nat.genus                      ? 
_entity_src_nat.species                    ? 
_entity_src_nat.strain                     ? 
_entity_src_nat.tissue                     ? 
_entity_src_nat.tissue_fraction            ? 
_entity_src_nat.pdbx_secretion             ? 
_entity_src_nat.pdbx_fragment              ? 
_entity_src_nat.pdbx_variant               ? 
_entity_src_nat.pdbx_cell_line             ? 
_entity_src_nat.pdbx_atcc                  ? 
_entity_src_nat.pdbx_cellular_location     ? 
_entity_src_nat.pdbx_organ                 ? 
_entity_src_nat.pdbx_organelle             ? 
_entity_src_nat.pdbx_cell                  ? 
_entity_src_nat.pdbx_plasmid_name          ? 
_entity_src_nat.pdbx_plasmid_details       ? 
_entity_src_nat.details                    ? 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
ALA 'L-peptide linking' y ALANINE         ? 'C3 H7 N O2'     89.093  
ARG 'L-peptide linking' y ARGININE        ? 'C6 H15 N4 O2 1' 175.209 
ASN 'L-peptide linking' y ASPARAGINE      ? 'C4 H8 N2 O3'    132.118 
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4'     133.103 
CYS 'L-peptide linking' y CYSTEINE        ? 'C3 H7 N O2 S'   121.158 
GLN 'L-peptide linking' y GLUTAMINE       ? 'C5 H10 N2 O3'   146.144 
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4'     147.129 
GLY 'peptide linking'   y GLYCINE         ? 'C2 H5 N O2'     75.067  
HIS 'L-peptide linking' y HISTIDINE       ? 'C6 H10 N3 O2 1' 156.162 
ILE 'L-peptide linking' y ISOLEUCINE      ? 'C6 H13 N O2'    131.173 
LEU 'L-peptide linking' y LEUCINE         ? 'C6 H13 N O2'    131.173 
LYS 'L-peptide linking' y LYSINE          ? 'C6 H15 N2 O2 1' 147.195 
MET 'L-peptide linking' y METHIONINE      ? 'C5 H11 N O2 S'  149.211 
PHE 'L-peptide linking' y PHENYLALANINE   ? 'C9 H11 N O2'    165.189 
PRO 'L-peptide linking' y PROLINE         ? 'C5 H9 N O2'     115.130 
SER 'L-peptide linking' y SERINE          ? 'C3 H7 N O3'     105.093 
THR 'L-peptide linking' y THREONINE       ? 'C4 H9 N O3'     119.119 
TYR 'L-peptide linking' y TYROSINE        ? 'C9 H11 N O3'    181.189 
VAL 'L-peptide linking' y VALINE          ? 'C5 H11 N O2'    117.146 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1   MET 1   1   1   MET MET 4 . n 
A 1 2   LYS 2   2   2   LYS LYS 4 . n 
A 1 3   GLN 3   3   3   GLN GLN 4 . n 
A 1 4   LYS 4   4   4   LYS LYS 4 . n 
A 1 5   VAL 5   5   5   VAL VAL 4 . n 
A 1 6   HIS 6   6   6   HIS HIS 4 . n 
A 1 7   SER 7   7   7   SER SER 4 . n 
A 1 8   VAL 8   8   8   VAL VAL 4 . n 
A 1 9   SER 9   9   9   SER SER 4 . n 
A 1 10  TYR 10  10  10  TYR TYR 4 . n 
A 1 11  LEU 11  11  11  LEU LEU 4 . n 
A 1 12  ALA 12  12  12  ALA ALA 4 . n 
A 1 13  LYS 13  13  13  LYS LYS 4 . n 
A 1 14  ALA 14  14  14  ALA ALA 4 . n 
A 1 15  GLU 15  15  15  GLU GLU 4 . n 
A 1 16  PHE 16  16  16  PHE PHE 4 . n 
A 1 17  GLU 17  17  17  GLU GLU 4 . n 
A 1 18  TYR 18  18  18  TYR TYR 4 . n 
A 1 19  LYS 19  19  19  LYS LYS 4 . n 
A 1 20  ASN 20  20  20  ASN ASN 4 . n 
A 1 21  GLY 21  21  21  GLY GLY 4 . n 
A 1 22  VAL 22  22  22  VAL VAL 4 . n 
A 1 23  TYR 23  23  23  TYR TYR 4 . n 
A 1 24  ASP 24  24  24  ASP ASP 4 . n 
A 1 25  LEU 25  25  25  LEU LEU 4 . n 
A 1 26  VAL 26  26  26  VAL VAL 4 . n 
A 1 27  ALA 27  27  27  ALA ALA 4 . n 
A 1 28  LEU 28  28  28  LEU LEU 4 . n 
A 1 29  PRO 29  29  29  PRO PRO 4 . n 
A 1 30  THR 30  30  30  THR THR 4 . n 
A 1 31  GLY 31  31  31  GLY GLY 4 . n 
A 1 32  ALA 32  32  32  ALA ALA 4 . n 
A 1 33  GLU 33  33  33  GLU GLU 4 . n 
A 1 34  VAL 34  34  34  VAL VAL 4 . n 
A 1 35  ILE 35  35  35  ILE ILE 4 . n 
A 1 36  LYS 36  36  36  LYS LYS 4 . n 
A 1 37  ILE 37  37  37  ILE ILE 4 . n 
A 1 38  SER 38  38  38  SER SER 4 . n 
A 1 39  LEU 39  39  39  LEU LEU 4 . n 
A 1 40  GLU 40  40  40  GLU GLU 4 . n 
A 1 41  VAL 41  41  41  VAL VAL 4 . n 
A 1 42  VAL 42  42  42  VAL VAL 4 . n 
A 1 43  GLY 43  43  43  GLY GLY 4 . n 
A 1 44  LEU 44  44  44  LEU LEU 4 . n 
A 1 45  PRO 45  45  45  PRO PRO 4 . n 
A 1 46  THR 46  46  46  THR THR 4 . n 
A 1 47  ALA 47  47  47  ALA ALA 4 . n 
A 1 48  GLY 48  48  48  GLY GLY 4 . n 
A 1 49  HIS 49  49  49  HIS HIS 4 . n 
A 1 50  VAL 50  50  50  VAL VAL 4 . n 
A 1 51  SER 51  51  51  SER SER 4 . n 
A 1 52  VAL 52  52  52  VAL VAL 4 . n 
A 1 53  GLY 53  53  53  GLY GLY 4 . n 
A 1 54  PHE 54  54  54  PHE PHE 4 . n 
A 1 55  LYS 55  55  55  LYS LYS 4 . n 
A 1 56  ASP 56  56  56  ASP ASP 4 . n 
A 1 57  GLU 57  57  57  GLU GLU 4 . n 
A 1 58  SER 58  58  58  SER SER 4 . n 
A 1 59  LYS 59  59  59  LYS LYS 4 . n 
A 1 60  LYS 60  60  60  LYS LYS 4 . n 
A 1 61  ASN 61  61  61  ASN ASN 4 . n 
A 1 62  TYR 62  62  62  TYR TYR 4 . n 
A 1 63  SER 63  63  63  SER SER 4 . n 
A 1 64  SER 64  64  64  SER SER 4 . n 
A 1 65  ILE 65  65  65  ILE ILE 4 . n 
A 1 66  LEU 66  66  66  LEU LEU 4 . n 
A 1 67  THR 67  67  67  THR THR 4 . n 
A 1 68  LEU 68  68  68  LEU LEU 4 . n 
A 1 69  PRO 69  69  69  PRO PRO 4 . n 
A 1 70  VAL 70  70  70  VAL VAL 4 . n 
A 1 71  ASN 71  71  71  ASN ASN 4 . n 
A 1 72  GLU 72  72  72  GLU GLU 4 . n 
A 1 73  THR 73  73  73  THR THR 4 . n 
A 1 74  SER 74  74  74  SER SER 4 . n 
A 1 75  GLY 75  75  75  GLY GLY 4 . n 
A 1 76  VAL 76  76  76  VAL VAL 4 . n 
A 1 77  VAL 77  77  77  VAL VAL 4 . n 
A 1 78  THR 78  78  78  THR THR 4 . n 
A 1 79  LYS 79  79  79  LYS LYS 4 . n 
A 1 80  ASP 80  80  80  ASP ASP 4 . n 
A 1 81  TYR 81  81  81  TYR TYR 4 . n 
A 1 82  THR 82  82  82  THR THR 4 . n 
A 1 83  VAL 83  83  83  VAL VAL 4 . n 
A 1 84  LYS 84  84  84  LYS LYS 4 . n 
A 1 85  SER 85  85  85  SER SER 4 . n 
A 1 86  ASP 86  86  86  ASP ASP 4 . n 
A 1 87  LYS 87  87  87  LYS LYS 4 . n 
A 1 88  ILE 88  88  88  ILE ILE 4 . n 
A 1 89  VAL 89  89  89  VAL VAL 4 . n 
A 1 90  ALA 90  90  90  ALA ALA 4 . n 
A 1 91  ALA 91  91  91  ALA ALA 4 . n 
A 1 92  GLU 92  92  92  GLU GLU 4 . n 
A 1 93  VAL 93  93  93  VAL VAL 4 . n 
A 1 94  LYS 94  94  94  LYS LYS 4 . n 
A 1 95  ASP 95  95  95  ASP ASP 4 . n 
A 1 96  ALA 96  96  96  ALA ALA 4 . n 
A 1 97  LEU 97  97  97  LEU LEU 4 . n 
A 1 98  ALA 98  98  98  ALA ALA 4 . n 
A 1 99  GLU 99  99  99  GLU GLU 4 . n 
A 1 100 GLY 100 100 100 GLY GLY 4 . n 
A 1 101 SER 101 101 101 SER SER 4 . n 
A 1 102 ASP 102 102 102 ASP ASP 4 . n 
A 1 103 GLY 103 103 103 GLY GLY 4 . n 
A 1 104 ARG 104 104 104 ARG ARG 4 . n 
A 1 105 PRO 105 105 105 PRO PRO 4 . n 
A 1 106 VAL 106 106 106 VAL VAL 4 . n 
A 1 107 LYS 107 107 107 LYS LYS 4 . n 
A 1 108 CYS 108 108 108 CYS CYS 4 . n 
A 1 109 VAL 109 109 109 VAL VAL 4 . n 
A 1 110 LEU 110 110 110 LEU LEU 4 . n 
A 1 111 ARG 111 111 111 ARG ARG 4 . n 
A 1 112 ALA 112 112 112 ALA ALA 4 . n 
A 1 113 LEU 113 113 113 LEU LEU 4 . n 
A 1 114 TYR 114 114 114 TYR TYR 4 . n 
A 1 115 PHE 115 115 115 PHE PHE 4 . n 
A 1 116 LEU 116 116 116 LEU LEU 4 . n 
A 1 117 PRO 117 117 117 PRO PRO 4 . n 
A 1 118 SER 118 118 118 SER SER 4 . n 
A 1 119 VAL 119 119 119 VAL VAL 4 . n 
A 1 120 ILE 120 120 120 ILE ILE 4 . n 
A 1 121 GLU 121 121 121 GLU GLU 4 . n 
A 1 122 VAL 122 122 122 VAL VAL 4 . n 
A 1 123 GLU 123 123 123 GLU GLU 4 . n 
A 1 124 TYR 124 124 124 TYR TYR 4 . n 
B 1 1   MET 1   1   1   MET MET 5 . n 
B 1 2   LYS 2   2   2   LYS LYS 5 . n 
B 1 3   GLN 3   3   3   GLN GLN 5 . n 
B 1 4   LYS 4   4   4   LYS LYS 5 . n 
B 1 5   VAL 5   5   5   VAL VAL 5 . n 
B 1 6   HIS 6   6   6   HIS HIS 5 . n 
B 1 7   SER 7   7   7   SER SER 5 . n 
B 1 8   VAL 8   8   8   VAL VAL 5 . n 
B 1 9   SER 9   9   9   SER SER 5 . n 
B 1 10  TYR 10  10  10  TYR TYR 5 . n 
B 1 11  LEU 11  11  11  LEU LEU 5 . n 
B 1 12  ALA 12  12  12  ALA ALA 5 . n 
B 1 13  LYS 13  13  13  LYS LYS 5 . n 
B 1 14  ALA 14  14  14  ALA ALA 5 . n 
B 1 15  GLU 15  15  15  GLU GLU 5 . n 
B 1 16  PHE 16  16  16  PHE PHE 5 . n 
B 1 17  GLU 17  17  17  GLU GLU 5 . n 
B 1 18  TYR 18  18  18  TYR TYR 5 . n 
B 1 19  LYS 19  19  19  LYS LYS 5 . n 
B 1 20  ASN 20  20  20  ASN ASN 5 . n 
B 1 21  GLY 21  21  21  GLY GLY 5 . n 
B 1 22  VAL 22  22  22  VAL VAL 5 . n 
B 1 23  TYR 23  23  23  TYR TYR 5 . n 
B 1 24  ASP 24  24  24  ASP ASP 5 . n 
B 1 25  LEU 25  25  25  LEU LEU 5 . n 
B 1 26  VAL 26  26  26  VAL VAL 5 . n 
B 1 27  ALA 27  27  27  ALA ALA 5 . n 
B 1 28  LEU 28  28  28  LEU LEU 5 . n 
B 1 29  PRO 29  29  29  PRO PRO 5 . n 
B 1 30  THR 30  30  30  THR THR 5 . n 
B 1 31  GLY 31  31  31  GLY GLY 5 . n 
B 1 32  ALA 32  32  32  ALA ALA 5 . n 
B 1 33  GLU 33  33  33  GLU GLU 5 . n 
B 1 34  VAL 34  34  34  VAL VAL 5 . n 
B 1 35  ILE 35  35  35  ILE ILE 5 . n 
B 1 36  LYS 36  36  36  LYS LYS 5 . n 
B 1 37  ILE 37  37  37  ILE ILE 5 . n 
B 1 38  SER 38  38  38  SER SER 5 . n 
B 1 39  LEU 39  39  39  LEU LEU 5 . n 
B 1 40  GLU 40  40  40  GLU GLU 5 . n 
B 1 41  VAL 41  41  41  VAL VAL 5 . n 
B 1 42  VAL 42  42  42  VAL VAL 5 . n 
B 1 43  GLY 43  43  43  GLY GLY 5 . n 
B 1 44  LEU 44  44  44  LEU LEU 5 . n 
B 1 45  PRO 45  45  45  PRO PRO 5 . n 
B 1 46  THR 46  46  46  THR THR 5 . n 
B 1 47  ALA 47  47  47  ALA ALA 5 . n 
B 1 48  GLY 48  48  48  GLY GLY 5 . n 
B 1 49  HIS 49  49  49  HIS HIS 5 . n 
B 1 50  VAL 50  50  50  VAL VAL 5 . n 
B 1 51  SER 51  51  51  SER SER 5 . n 
B 1 52  VAL 52  52  52  VAL VAL 5 . n 
B 1 53  GLY 53  53  53  GLY GLY 5 . n 
B 1 54  PHE 54  54  54  PHE PHE 5 . n 
B 1 55  LYS 55  55  55  LYS LYS 5 . n 
B 1 56  ASP 56  56  56  ASP ASP 5 . n 
B 1 57  GLU 57  57  57  GLU GLU 5 . n 
B 1 58  SER 58  58  58  SER SER 5 . n 
B 1 59  LYS 59  59  59  LYS LYS 5 . n 
B 1 60  LYS 60  60  60  LYS LYS 5 . n 
B 1 61  ASN 61  61  61  ASN ASN 5 . n 
B 1 62  TYR 62  62  62  TYR TYR 5 . n 
B 1 63  SER 63  63  63  SER SER 5 . n 
B 1 64  SER 64  64  64  SER SER 5 . n 
B 1 65  ILE 65  65  65  ILE ILE 5 . n 
B 1 66  LEU 66  66  66  LEU LEU 5 . n 
B 1 67  THR 67  67  67  THR THR 5 . n 
B 1 68  LEU 68  68  68  LEU LEU 5 . n 
B 1 69  PRO 69  69  69  PRO PRO 5 . n 
B 1 70  VAL 70  70  70  VAL VAL 5 . n 
B 1 71  ASN 71  71  71  ASN ASN 5 . n 
B 1 72  GLU 72  72  72  GLU GLU 5 . n 
B 1 73  THR 73  73  73  THR THR 5 . n 
B 1 74  SER 74  74  74  SER SER 5 . n 
B 1 75  GLY 75  75  75  GLY GLY 5 . n 
B 1 76  VAL 76  76  76  VAL VAL 5 . n 
B 1 77  VAL 77  77  77  VAL VAL 5 . n 
B 1 78  THR 78  78  78  THR THR 5 . n 
B 1 79  LYS 79  79  79  LYS LYS 5 . n 
B 1 80  ASP 80  80  80  ASP ASP 5 . n 
B 1 81  TYR 81  81  81  TYR TYR 5 . n 
B 1 82  THR 82  82  82  THR THR 5 . n 
B 1 83  VAL 83  83  83  VAL VAL 5 . n 
B 1 84  LYS 84  84  84  LYS LYS 5 . n 
B 1 85  SER 85  85  85  SER SER 5 . n 
B 1 86  ASP 86  86  86  ASP ASP 5 . n 
B 1 87  LYS 87  87  87  LYS LYS 5 . n 
B 1 88  ILE 88  88  88  ILE ILE 5 . n 
B 1 89  VAL 89  89  89  VAL VAL 5 . n 
B 1 90  ALA 90  90  90  ALA ALA 5 . n 
B 1 91  ALA 91  91  91  ALA ALA 5 . n 
B 1 92  GLU 92  92  92  GLU GLU 5 . n 
B 1 93  VAL 93  93  93  VAL VAL 5 . n 
B 1 94  LYS 94  94  94  LYS LYS 5 . n 
B 1 95  ASP 95  95  95  ASP ASP 5 . n 
B 1 96  ALA 96  96  96  ALA ALA 5 . n 
B 1 97  LEU 97  97  97  LEU LEU 5 . n 
B 1 98  ALA 98  98  98  ALA ALA 5 . n 
B 1 99  GLU 99  99  99  GLU GLU 5 . n 
B 1 100 GLY 100 100 100 GLY GLY 5 . n 
B 1 101 SER 101 101 101 SER SER 5 . n 
B 1 102 ASP 102 102 102 ASP ASP 5 . n 
B 1 103 GLY 103 103 103 GLY GLY 5 . n 
B 1 104 ARG 104 104 104 ARG ARG 5 . n 
B 1 105 PRO 105 105 105 PRO PRO 5 . n 
B 1 106 VAL 106 106 106 VAL VAL 5 . n 
B 1 107 LYS 107 107 107 LYS LYS 5 . n 
B 1 108 CYS 108 108 108 CYS CYS 5 . n 
B 1 109 VAL 109 109 109 VAL VAL 5 . n 
B 1 110 LEU 110 110 110 LEU LEU 5 . n 
B 1 111 ARG 111 111 111 ARG ARG 5 . n 
B 1 112 ALA 112 112 112 ALA ALA 5 . n 
B 1 113 LEU 113 113 113 LEU LEU 5 . n 
B 1 114 TYR 114 114 114 TYR TYR 5 . n 
B 1 115 PHE 115 115 115 PHE PHE 5 . n 
B 1 116 LEU 116 116 116 LEU LEU 5 . n 
B 1 117 PRO 117 117 117 PRO PRO 5 . n 
B 1 118 SER 118 118 118 SER SER 5 . n 
B 1 119 VAL 119 119 119 VAL VAL 5 . n 
B 1 120 ILE 120 120 120 ILE ILE 5 . n 
B 1 121 GLU 121 121 121 GLU GLU 5 . n 
B 1 122 VAL 122 122 122 VAL VAL 5 . n 
B 1 123 GLU 123 123 123 GLU GLU 5 . n 
B 1 124 TYR 124 124 124 TYR TYR 5 . n 
C 1 1   MET 1   1   1   MET MET 6 . n 
C 1 2   LYS 2   2   2   LYS LYS 6 . n 
C 1 3   GLN 3   3   3   GLN GLN 6 . n 
C 1 4   LYS 4   4   4   LYS LYS 6 . n 
C 1 5   VAL 5   5   5   VAL VAL 6 . n 
C 1 6   HIS 6   6   6   HIS HIS 6 . n 
C 1 7   SER 7   7   7   SER SER 6 . n 
C 1 8   VAL 8   8   8   VAL VAL 6 . n 
C 1 9   SER 9   9   9   SER SER 6 . n 
C 1 10  TYR 10  10  10  TYR TYR 6 . n 
C 1 11  LEU 11  11  11  LEU LEU 6 . n 
C 1 12  ALA 12  12  12  ALA ALA 6 . n 
C 1 13  LYS 13  13  13  LYS LYS 6 . n 
C 1 14  ALA 14  14  14  ALA ALA 6 . n 
C 1 15  GLU 15  15  15  GLU GLU 6 . n 
C 1 16  PHE 16  16  16  PHE PHE 6 . n 
C 1 17  GLU 17  17  17  GLU GLU 6 . n 
C 1 18  TYR 18  18  18  TYR TYR 6 . n 
C 1 19  LYS 19  19  19  LYS LYS 6 . n 
C 1 20  ASN 20  20  20  ASN ASN 6 . n 
C 1 21  GLY 21  21  21  GLY GLY 6 . n 
C 1 22  VAL 22  22  22  VAL VAL 6 . n 
C 1 23  TYR 23  23  23  TYR TYR 6 . n 
C 1 24  ASP 24  24  24  ASP ASP 6 . n 
C 1 25  LEU 25  25  25  LEU LEU 6 . n 
C 1 26  VAL 26  26  26  VAL VAL 6 . n 
C 1 27  ALA 27  27  27  ALA ALA 6 . n 
C 1 28  LEU 28  28  28  LEU LEU 6 . n 
C 1 29  PRO 29  29  29  PRO PRO 6 . n 
C 1 30  THR 30  30  30  THR THR 6 . n 
C 1 31  GLY 31  31  31  GLY GLY 6 . n 
C 1 32  ALA 32  32  32  ALA ALA 6 . n 
C 1 33  GLU 33  33  33  GLU GLU 6 . n 
C 1 34  VAL 34  34  34  VAL VAL 6 . n 
C 1 35  ILE 35  35  35  ILE ILE 6 . n 
C 1 36  LYS 36  36  36  LYS LYS 6 . n 
C 1 37  ILE 37  37  37  ILE ILE 6 . n 
C 1 38  SER 38  38  38  SER SER 6 . n 
C 1 39  LEU 39  39  39  LEU LEU 6 . n 
C 1 40  GLU 40  40  40  GLU GLU 6 . n 
C 1 41  VAL 41  41  41  VAL VAL 6 . n 
C 1 42  VAL 42  42  42  VAL VAL 6 . n 
C 1 43  GLY 43  43  43  GLY GLY 6 . n 
C 1 44  LEU 44  44  44  LEU LEU 6 . n 
C 1 45  PRO 45  45  45  PRO PRO 6 . n 
C 1 46  THR 46  46  46  THR THR 6 . n 
C 1 47  ALA 47  47  47  ALA ALA 6 . n 
C 1 48  GLY 48  48  48  GLY GLY 6 . n 
C 1 49  HIS 49  49  49  HIS HIS 6 . n 
C 1 50  VAL 50  50  50  VAL VAL 6 . n 
C 1 51  SER 51  51  51  SER SER 6 . n 
C 1 52  VAL 52  52  52  VAL VAL 6 . n 
C 1 53  GLY 53  53  53  GLY GLY 6 . n 
C 1 54  PHE 54  54  54  PHE PHE 6 . n 
C 1 55  LYS 55  55  55  LYS LYS 6 . n 
C 1 56  ASP 56  56  56  ASP ASP 6 . n 
C 1 57  GLU 57  57  57  GLU GLU 6 . n 
C 1 58  SER 58  58  58  SER SER 6 . n 
C 1 59  LYS 59  59  59  LYS LYS 6 . n 
C 1 60  LYS 60  60  60  LYS LYS 6 . n 
C 1 61  ASN 61  61  61  ASN ASN 6 . n 
C 1 62  TYR 62  62  62  TYR TYR 6 . n 
C 1 63  SER 63  63  63  SER SER 6 . n 
C 1 64  SER 64  64  64  SER SER 6 . n 
C 1 65  ILE 65  65  65  ILE ILE 6 . n 
C 1 66  LEU 66  66  66  LEU LEU 6 . n 
C 1 67  THR 67  67  67  THR THR 6 . n 
C 1 68  LEU 68  68  68  LEU LEU 6 . n 
C 1 69  PRO 69  69  69  PRO PRO 6 . n 
C 1 70  VAL 70  70  70  VAL VAL 6 . n 
C 1 71  ASN 71  71  71  ASN ASN 6 . n 
C 1 72  GLU 72  72  72  GLU GLU 6 . n 
C 1 73  THR 73  73  73  THR THR 6 . n 
C 1 74  SER 74  74  74  SER SER 6 . n 
C 1 75  GLY 75  75  75  GLY GLY 6 . n 
C 1 76  VAL 76  76  76  VAL VAL 6 . n 
C 1 77  VAL 77  77  77  VAL VAL 6 . n 
C 1 78  THR 78  78  78  THR THR 6 . n 
C 1 79  LYS 79  79  79  LYS LYS 6 . n 
C 1 80  ASP 80  80  80  ASP ASP 6 . n 
C 1 81  TYR 81  81  81  TYR TYR 6 . n 
C 1 82  THR 82  82  82  THR THR 6 . n 
C 1 83  VAL 83  83  83  VAL VAL 6 . n 
C 1 84  LYS 84  84  84  LYS LYS 6 . n 
C 1 85  SER 85  85  85  SER SER 6 . n 
C 1 86  ASP 86  86  86  ASP ASP 6 . n 
C 1 87  LYS 87  87  87  LYS LYS 6 . n 
C 1 88  ILE 88  88  88  ILE ILE 6 . n 
C 1 89  VAL 89  89  89  VAL VAL 6 . n 
C 1 90  ALA 90  90  90  ALA ALA 6 . n 
C 1 91  ALA 91  91  91  ALA ALA 6 . n 
C 1 92  GLU 92  92  92  GLU GLU 6 . n 
C 1 93  VAL 93  93  93  VAL VAL 6 . n 
C 1 94  LYS 94  94  94  LYS LYS 6 . n 
C 1 95  ASP 95  95  95  ASP ASP 6 . n 
C 1 96  ALA 96  96  96  ALA ALA 6 . n 
C 1 97  LEU 97  97  97  LEU LEU 6 . n 
C 1 98  ALA 98  98  98  ALA ALA 6 . n 
C 1 99  GLU 99  99  99  GLU GLU 6 . n 
C 1 100 GLY 100 100 100 GLY GLY 6 . n 
C 1 101 SER 101 101 101 SER SER 6 . n 
C 1 102 ASP 102 102 102 ASP ASP 6 . n 
C 1 103 GLY 103 103 103 GLY GLY 6 . n 
C 1 104 ARG 104 104 104 ARG ARG 6 . n 
C 1 105 PRO 105 105 105 PRO PRO 6 . n 
C 1 106 VAL 106 106 106 VAL VAL 6 . n 
C 1 107 LYS 107 107 107 LYS LYS 6 . n 
C 1 108 CYS 108 108 108 CYS CYS 6 . n 
C 1 109 VAL 109 109 109 VAL VAL 6 . n 
C 1 110 LEU 110 110 110 LEU LEU 6 . n 
C 1 111 ARG 111 111 111 ARG ARG 6 . n 
C 1 112 ALA 112 112 112 ALA ALA 6 . n 
C 1 113 LEU 113 113 113 LEU LEU 6 . n 
C 1 114 TYR 114 114 114 TYR TYR 6 . n 
C 1 115 PHE 115 115 115 PHE PHE 6 . n 
C 1 116 LEU 116 116 116 LEU LEU 6 . n 
C 1 117 PRO 117 117 117 PRO PRO 6 . n 
C 1 118 SER 118 118 118 SER SER 6 . n 
C 1 119 VAL 119 119 119 VAL VAL 6 . n 
C 1 120 ILE 120 120 120 ILE ILE 6 . n 
C 1 121 GLU 121 121 121 GLU GLU 6 . n 
C 1 122 VAL 122 122 122 VAL VAL 6 . n 
C 1 123 GLU 123 123 123 GLU GLU 6 . n 
C 1 124 TYR 124 124 124 TYR TYR 6 . n 
# 
_software.citation_id            ? 
_software.classification         refinement 
_software.compiler_name          ? 
_software.compiler_version       ? 
_software.contact_author         ? 
_software.contact_author_email   ? 
_software.date                   ? 
_software.description            ? 
_software.dependencies           ? 
_software.hardware               ? 
_software.language               ? 
_software.location               ? 
_software.mods                   ? 
_software.name                   PHENIX 
_software.os                     ? 
_software.os_version             ? 
_software.type                   ? 
_software.version                1.18.2_3874: 
_software.pdbx_ordinal           1 
# 
_cell.angle_alpha                  90.00 
_cell.angle_alpha_esd              ? 
_cell.angle_beta                   90.00 
_cell.angle_beta_esd               ? 
_cell.angle_gamma                  90.00 
_cell.angle_gamma_esd              ? 
_cell.entry_id                     7DOU 
_cell.details                      ? 
_cell.formula_units_Z              ? 
_cell.length_a                     1.00 
_cell.length_a_esd                 ? 
_cell.length_b                     1.00 
_cell.length_b_esd                 ? 
_cell.length_c                     1.00 
_cell.length_c_esd                 ? 
_cell.volume                       ? 
_cell.volume_esd                   ? 
_cell.Z_PDB                        ? 
_cell.reciprocal_angle_alpha       ? 
_cell.reciprocal_angle_beta        ? 
_cell.reciprocal_angle_gamma       ? 
_cell.reciprocal_angle_alpha_esd   ? 
_cell.reciprocal_angle_beta_esd    ? 
_cell.reciprocal_angle_gamma_esd   ? 
_cell.reciprocal_length_a          ? 
_cell.reciprocal_length_b          ? 
_cell.reciprocal_length_c          ? 
_cell.reciprocal_length_a_esd      ? 
_cell.reciprocal_length_b_esd      ? 
_cell.reciprocal_length_c_esd      ? 
_cell.pdbx_unique_axis             ? 
# 
_symmetry.entry_id                         7DOU 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                1 
_symmetry.space_group_name_Hall            ? 
_symmetry.space_group_name_H-M             'P 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
# 
_exptl.absorpt_coefficient_mu     ? 
_exptl.absorpt_correction_T_max   ? 
_exptl.absorpt_correction_T_min   ? 
_exptl.absorpt_correction_type    ? 
_exptl.absorpt_process_details    ? 
_exptl.entry_id                   7DOU 
_exptl.crystals_number            ? 
_exptl.details                    ? 
_exptl.method                     'ELECTRON MICROSCOPY' 
_exptl.method_details             ? 
# 
_refine.pdbx_refine_id                           'ELECTRON MICROSCOPY' 
_refine.entry_id                                 7DOU 
_refine.pdbx_diffrn_id                           ? 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.ls_number_reflns_obs                     ? 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             ? 
_refine.ls_d_res_high                            . 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          ? 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
loop_
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.criterion 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.number 
_refine_ls_restr.rejects 
_refine_ls_restr.type 
_refine_ls_restr.weight 
_refine_ls_restr.pdbx_restraint_function 
'ELECTRON MICROSCOPY' ? 0.003 ? 2889 ? f_bond_d           ? ? 
'ELECTRON MICROSCOPY' ? 0.644 ? 3915 ? f_angle_d          ? ? 
'ELECTRON MICROSCOPY' ? 5.899 ? 396  ? f_dihedral_angle_d ? ? 
'ELECTRON MICROSCOPY' ? 0.046 ? 471  ? f_chiral_restr     ? ? 
'ELECTRON MICROSCOPY' ? 0.005 ? 486  ? f_plane_restr      ? ? 
# 
_struct.entry_id                     7DOU 
_struct.title                        'Trimeric cement protein structure of Helicobacter pylori bacteriophage KHP40' 
_struct.pdbx_model_details           ? 
_struct.pdbx_formula_weight          ? 
_struct.pdbx_formula_weight_method   ? 
_struct.pdbx_model_type_details      ? 
_struct.pdbx_CASP_flag               N 
# 
_struct_keywords.entry_id        7DOU 
_struct_keywords.text            'CAPSID, PHAGE, PHAGE HEAD, CRYOEM, VIRUS' 
_struct_keywords.pdbx_keywords   VIRUS 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 1 ? 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    UNP 
_struct_ref.db_code                    I7GUT5_9CAUD 
_struct_ref.pdbx_db_accession          I7GUT5 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_seq_one_letter_code   
;MKQKVHSVSYLAKAEFEYKNGVYDLVALPTGAEVIKISLEVVGLPTAGHVSVGFKDESKKNYSSILTLPVNETSGVVTKD
YTVKSDKIVAAEVKDALAEGSDGRPVKCVLRALYFLPSVIEVEY
;
_struct_ref.pdbx_align_begin           1 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 7DOU 4 1 ? 124 ? I7GUT5 1 ? 124 ? 1 124 
2 1 7DOU 5 1 ? 124 ? I7GUT5 1 ? 124 ? 1 124 
3 1 7DOU 6 1 ? 124 ? I7GUT5 1 ? 124 ? 1 124 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   trimeric 
_pdbx_struct_assembly.oligomeric_count     3 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C 
# 
_pdbx_struct_assembly_auth_evidence.id                     1 
_pdbx_struct_assembly_auth_evidence.assembly_id            1 
_pdbx_struct_assembly_auth_evidence.experimental_support   none 
_pdbx_struct_assembly_auth_evidence.details                ? 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   ? 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_struct_sheet.id 
_struct_sheet.type 
_struct_sheet.number_strands 
_struct_sheet.details 
AA1 ? 6 ? 
AA2 ? 6 ? 
AA3 ? 4 ? 
AA4 ? 4 ? 
AA5 ? 4 ? 
AA6 ? 2 ? 
AA7 ? 4 ? 
AA8 ? 4 ? 
AA9 ? 4 ? 
AB1 ? 2 ? 
AB2 ? 4 ? 
# 
loop_
_struct_sheet_order.sheet_id 
_struct_sheet_order.range_id_1 
_struct_sheet_order.range_id_2 
_struct_sheet_order.offset 
_struct_sheet_order.sense 
AA1 1 2 ? anti-parallel 
AA1 2 3 ? anti-parallel 
AA1 3 4 ? anti-parallel 
AA1 4 5 ? anti-parallel 
AA1 5 6 ? anti-parallel 
AA2 1 2 ? anti-parallel 
AA2 2 3 ? anti-parallel 
AA2 3 4 ? anti-parallel 
AA2 4 5 ? anti-parallel 
AA2 5 6 ? anti-parallel 
AA3 1 2 ? anti-parallel 
AA3 2 3 ? anti-parallel 
AA3 3 4 ? anti-parallel 
AA4 1 2 ? anti-parallel 
AA4 2 3 ? anti-parallel 
AA4 3 4 ? anti-parallel 
AA5 1 2 ? anti-parallel 
AA5 2 3 ? anti-parallel 
AA5 3 4 ? anti-parallel 
AA6 1 2 ? anti-parallel 
AA7 1 2 ? anti-parallel 
AA7 2 3 ? anti-parallel 
AA7 3 4 ? anti-parallel 
AA8 1 2 ? anti-parallel 
AA8 2 3 ? anti-parallel 
AA8 3 4 ? anti-parallel 
AA9 1 2 ? anti-parallel 
AA9 2 3 ? anti-parallel 
AA9 3 4 ? anti-parallel 
AB1 1 2 ? anti-parallel 
AB2 1 2 ? anti-parallel 
AB2 2 3 ? anti-parallel 
AB2 3 4 ? anti-parallel 
# 
loop_
_struct_sheet_range.sheet_id 
_struct_sheet_range.id 
_struct_sheet_range.beg_label_comp_id 
_struct_sheet_range.beg_label_asym_id 
_struct_sheet_range.beg_label_seq_id 
_struct_sheet_range.pdbx_beg_PDB_ins_code 
_struct_sheet_range.end_label_comp_id 
_struct_sheet_range.end_label_asym_id 
_struct_sheet_range.end_label_seq_id 
_struct_sheet_range.pdbx_end_PDB_ins_code 
_struct_sheet_range.beg_auth_comp_id 
_struct_sheet_range.beg_auth_asym_id 
_struct_sheet_range.beg_auth_seq_id 
_struct_sheet_range.end_auth_comp_id 
_struct_sheet_range.end_auth_asym_id 
_struct_sheet_range.end_auth_seq_id 
AA1 1 VAL A 119 ? GLU A 123 ? VAL 4 119 GLU 4 123 
AA1 2 LYS A 2   ? HIS A 6   ? LYS 4 2   HIS 4 6   
AA1 3 SER C 9   ? PHE C 16  ? SER 6 9   PHE 6 16  
AA1 4 LYS C 107 ? PHE C 115 ? LYS 6 107 PHE 6 115 
AA1 5 GLU C 33  ? VAL C 42  ? GLU 6 33  VAL 6 42  
AA1 6 SER C 74  ? VAL C 76  ? SER 6 74  VAL 6 76  
AA2 1 VAL A 119 ? GLU A 123 ? VAL 4 119 GLU 4 123 
AA2 2 LYS A 2   ? HIS A 6   ? LYS 4 2   HIS 4 6   
AA2 3 SER C 9   ? PHE C 16  ? SER 6 9   PHE 6 16  
AA2 4 LYS C 107 ? PHE C 115 ? LYS 6 107 PHE 6 115 
AA2 5 GLU C 33  ? VAL C 42  ? GLU 6 33  VAL 6 42  
AA2 6 TYR C 81  ? THR C 82  ? TYR 6 81  THR 6 82  
AA3 1 SER A 9   ? PHE A 16  ? SER 4 9   PHE 4 16  
AA3 2 LYS A 107 ? PHE A 115 ? LYS 4 107 PHE 4 115 
AA3 3 GLU A 33  ? VAL A 42  ? GLU 4 33  VAL 4 42  
AA3 4 SER A 74  ? VAL A 76  ? SER 4 74  VAL 4 76  
AA4 1 SER A 9   ? PHE A 16  ? SER 4 9   PHE 4 16  
AA4 2 LYS A 107 ? PHE A 115 ? LYS 4 107 PHE 4 115 
AA4 3 GLU A 33  ? VAL A 42  ? GLU 4 33  VAL 4 42  
AA4 4 TYR A 81  ? THR A 82  ? TYR 4 81  THR 4 82  
AA5 1 GLY A 21  ? ALA A 27  ? GLY 4 21  ALA 4 27  
AA5 2 ILE A 88  ? ALA A 96  ? ILE 4 88  ALA 4 96  
AA5 3 GLY A 48  ? LYS A 55  ? GLY 4 48  LYS 4 55  
AA5 4 SER A 63  ? PRO A 69  ? SER 4 63  PRO 4 69  
AA6 1 LYS B 2   ? HIS B 6   ? LYS 5 2   HIS 5 6   
AA6 2 VAL B 119 ? GLU B 123 ? VAL 5 119 GLU 5 123 
AA7 1 SER B 9   ? PHE B 16  ? SER 5 9   PHE 5 16  
AA7 2 LYS B 107 ? PHE B 115 ? LYS 5 107 PHE 5 115 
AA7 3 GLU B 33  ? VAL B 42  ? GLU 5 33  VAL 5 42  
AA7 4 SER B 74  ? VAL B 76  ? SER 5 74  VAL 5 76  
AA8 1 SER B 9   ? PHE B 16  ? SER 5 9   PHE 5 16  
AA8 2 LYS B 107 ? PHE B 115 ? LYS 5 107 PHE 5 115 
AA8 3 GLU B 33  ? VAL B 42  ? GLU 5 33  VAL 5 42  
AA8 4 TYR B 81  ? THR B 82  ? TYR 5 81  THR 5 82  
AA9 1 GLY B 21  ? ALA B 27  ? GLY 5 21  ALA 5 27  
AA9 2 ILE B 88  ? ALA B 96  ? ILE 5 88  ALA 5 96  
AA9 3 GLY B 48  ? LYS B 55  ? GLY 5 48  LYS 5 55  
AA9 4 SER B 63  ? PRO B 69  ? SER 5 63  PRO 5 69  
AB1 1 LYS C 2   ? HIS C 6   ? LYS 6 2   HIS 6 6   
AB1 2 VAL C 119 ? GLU C 123 ? VAL 6 119 GLU 6 123 
AB2 1 GLY C 21  ? ALA C 27  ? GLY 6 21  ALA 6 27  
AB2 2 ILE C 88  ? ALA C 96  ? ILE 6 88  ALA 6 96  
AB2 3 GLY C 48  ? LYS C 55  ? GLY 6 48  LYS 6 55  
AB2 4 SER C 63  ? PRO C 69  ? SER 6 63  PRO 6 69  
# 
loop_
_pdbx_struct_sheet_hbond.sheet_id 
_pdbx_struct_sheet_hbond.range_id_1 
_pdbx_struct_sheet_hbond.range_id_2 
_pdbx_struct_sheet_hbond.range_1_label_atom_id 
_pdbx_struct_sheet_hbond.range_1_label_comp_id 
_pdbx_struct_sheet_hbond.range_1_label_asym_id 
_pdbx_struct_sheet_hbond.range_1_label_seq_id 
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_1_auth_atom_id 
_pdbx_struct_sheet_hbond.range_1_auth_comp_id 
_pdbx_struct_sheet_hbond.range_1_auth_asym_id 
_pdbx_struct_sheet_hbond.range_1_auth_seq_id 
_pdbx_struct_sheet_hbond.range_2_label_atom_id 
_pdbx_struct_sheet_hbond.range_2_label_comp_id 
_pdbx_struct_sheet_hbond.range_2_label_asym_id 
_pdbx_struct_sheet_hbond.range_2_label_seq_id 
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_2_auth_atom_id 
_pdbx_struct_sheet_hbond.range_2_auth_comp_id 
_pdbx_struct_sheet_hbond.range_2_auth_asym_id 
_pdbx_struct_sheet_hbond.range_2_auth_seq_id 
AA1 1 2 O ILE A 120 ? O ILE 4 120 N VAL A 5   ? N VAL 4 5   
AA1 2 3 N HIS A 6   ? N HIS 4 6   O LEU C 11  ? O LEU 6 11  
AA1 3 4 N TYR C 10  ? N TYR 6 10  O TYR C 114 ? O TYR 6 114 
AA1 4 5 O PHE C 115 ? O PHE 6 115 N GLU C 33  ? N GLU 6 33  
AA1 5 6 N LEU C 39  ? N LEU 6 39  O GLY C 75  ? O GLY 6 75  
AA2 1 2 O ILE A 120 ? O ILE 4 120 N VAL A 5   ? N VAL 4 5   
AA2 2 3 N HIS A 6   ? N HIS 4 6   O LEU C 11  ? O LEU 6 11  
AA2 3 4 N TYR C 10  ? N TYR 6 10  O TYR C 114 ? O TYR 6 114 
AA2 4 5 O PHE C 115 ? O PHE 6 115 N GLU C 33  ? N GLU 6 33  
AA2 5 6 N VAL C 34  ? N VAL 6 34  O TYR C 81  ? O TYR 6 81  
AA3 1 2 N TYR A 10  ? N TYR 4 10  O TYR A 114 ? O TYR 4 114 
AA3 2 3 O PHE A 115 ? O PHE 4 115 N GLU A 33  ? N GLU 4 33  
AA3 3 4 N LEU A 39  ? N LEU 4 39  O GLY A 75  ? O GLY 4 75  
AA4 1 2 N TYR A 10  ? N TYR 4 10  O TYR A 114 ? O TYR 4 114 
AA4 2 3 O PHE A 115 ? O PHE 4 115 N GLU A 33  ? N GLU 4 33  
AA4 3 4 N VAL A 34  ? N VAL 4 34  O TYR A 81  ? O TYR 4 81  
AA5 1 2 N GLY A 21  ? N GLY 4 21  O VAL A 93  ? O VAL 4 93  
AA5 2 3 O ILE A 88  ? O ILE 4 88  N LYS A 55  ? N LYS 4 55  
AA5 3 4 N VAL A 52  ? N VAL 4 52  O ILE A 65  ? O ILE 4 65  
AA6 1 2 N VAL B 5   ? N VAL 5 5   O ILE B 120 ? O ILE 5 120 
AA7 1 2 N TYR B 10  ? N TYR 5 10  O TYR B 114 ? O TYR 5 114 
AA7 2 3 O PHE B 115 ? O PHE 5 115 N GLU B 33  ? N GLU 5 33  
AA7 3 4 N LEU B 39  ? N LEU 5 39  O GLY B 75  ? O GLY 5 75  
AA8 1 2 N TYR B 10  ? N TYR 5 10  O TYR B 114 ? O TYR 5 114 
AA8 2 3 O PHE B 115 ? O PHE 5 115 N GLU B 33  ? N GLU 5 33  
AA8 3 4 N VAL B 34  ? N VAL 5 34  O TYR B 81  ? O TYR 5 81  
AA9 1 2 N GLY B 21  ? N GLY 5 21  O VAL B 93  ? O VAL 5 93  
AA9 2 3 O ILE B 88  ? O ILE 5 88  N LYS B 55  ? N LYS 5 55  
AA9 3 4 N VAL B 52  ? N VAL 5 52  O ILE B 65  ? O ILE 5 65  
AB1 1 2 N VAL C 5   ? N VAL 6 5   O ILE C 120 ? O ILE 6 120 
AB2 1 2 N GLY C 21  ? N GLY 6 21  O VAL C 93  ? O VAL 6 93  
AB2 2 3 O ILE C 88  ? O ILE 6 88  N LYS C 55  ? N LYS 6 55  
AB2 3 4 N VAL C 52  ? N VAL 6 52  O ILE C 65  ? O ILE 6 65  
# 
_pdbx_validate_close_contact.id               1 
_pdbx_validate_close_contact.PDB_model_num    1 
_pdbx_validate_close_contact.auth_atom_id_1   OE2 
_pdbx_validate_close_contact.auth_asym_id_1   5 
_pdbx_validate_close_contact.auth_comp_id_1   GLU 
_pdbx_validate_close_contact.auth_seq_id_1    40 
_pdbx_validate_close_contact.PDB_ins_code_1   ? 
_pdbx_validate_close_contact.label_alt_id_1   ? 
_pdbx_validate_close_contact.auth_atom_id_2   NZ 
_pdbx_validate_close_contact.auth_asym_id_2   6 
_pdbx_validate_close_contact.auth_comp_id_2   LYS 
_pdbx_validate_close_contact.auth_seq_id_2    79 
_pdbx_validate_close_contact.PDB_ins_code_2   ? 
_pdbx_validate_close_contact.label_alt_id_2   ? 
_pdbx_validate_close_contact.dist             2.16 
# 
loop_
_pdbx_validate_torsion.id 
_pdbx_validate_torsion.PDB_model_num 
_pdbx_validate_torsion.auth_comp_id 
_pdbx_validate_torsion.auth_asym_id 
_pdbx_validate_torsion.auth_seq_id 
_pdbx_validate_torsion.PDB_ins_code 
_pdbx_validate_torsion.label_alt_id 
_pdbx_validate_torsion.phi 
_pdbx_validate_torsion.psi 
1  1 THR 4 73  ? ? 67.09  -0.69   
2  1 SER 4 85  ? ? 68.40  -5.15   
3  1 ALA 4 98  ? ? -66.05 -175.45 
4  1 SER 4 101 ? ? 66.62  -4.85   
5  1 THR 5 73  ? ? 67.10  -0.66   
6  1 SER 5 85  ? ? 68.42  -5.11   
7  1 ALA 5 98  ? ? -66.01 -175.51 
8  1 SER 5 101 ? ? 66.62  -4.83   
9  1 THR 6 73  ? ? 67.08  -0.65   
10 1 SER 6 85  ? ? 68.40  -5.09   
11 1 ALA 6 98  ? ? -66.04 -175.49 
12 1 SER 6 101 ? ? 66.63  -4.89   
# 
_em_3d_fitting.entry_id          7DOU 
_em_3d_fitting.id                1 
_em_3d_fitting.details           ? 
_em_3d_fitting.overall_b_value   ? 
_em_3d_fitting.ref_protocol      ? 
_em_3d_fitting.ref_space         ? 
_em_3d_fitting.target_criteria   ? 
_em_3d_fitting.method            ? 
# 
_em_3d_reconstruction.entry_id                    7DOU 
_em_3d_reconstruction.id                          1 
_em_3d_reconstruction.algorithm                   ? 
_em_3d_reconstruction.details                     ? 
_em_3d_reconstruction.refinement_type             ? 
_em_3d_reconstruction.image_processing_id         1 
_em_3d_reconstruction.num_class_averages          ? 
_em_3d_reconstruction.num_particles               6772 
_em_3d_reconstruction.resolution                  3.0 
_em_3d_reconstruction.resolution_method           'FSC 0.143 CUT-OFF' 
_em_3d_reconstruction.symmetry_type               POINT 
_em_3d_reconstruction.method                      ? 
_em_3d_reconstruction.nominal_pixel_size          ? 
_em_3d_reconstruction.actual_pixel_size           ? 
_em_3d_reconstruction.magnification_calibration   ? 
# 
_em_buffer.id            1 
_em_buffer.details       ? 
_em_buffer.pH            7.2 
_em_buffer.specimen_id   1 
_em_buffer.name          ? 
# 
_em_entity_assembly.id                   1 
_em_entity_assembly.parent_id            0 
_em_entity_assembly.details              ? 
_em_entity_assembly.name                 'Helicobacter phage KHP' 
_em_entity_assembly.source               NATURAL 
_em_entity_assembly.type                 VIRUS 
_em_entity_assembly.entity_id_list       1 
_em_entity_assembly.synonym              ? 
_em_entity_assembly.oligomeric_details   ? 
# 
_em_imaging.id                              1 
_em_imaging.entry_id                        7DOU 
_em_imaging.accelerating_voltage            300 
_em_imaging.alignment_procedure             ? 
_em_imaging.c2_aperture_diameter            ? 
_em_imaging.calibrated_defocus_max          ? 
_em_imaging.calibrated_defocus_min          ? 
_em_imaging.calibrated_magnification        ? 
_em_imaging.cryogen                         ? 
_em_imaging.details                         ? 
_em_imaging.electron_source                 'FIELD EMISSION GUN' 
_em_imaging.illumination_mode               'FLOOD BEAM' 
_em_imaging.microscope_model                'FEI TITAN KRIOS' 
_em_imaging.mode                            'BRIGHT FIELD' 
_em_imaging.nominal_cs                      ? 
_em_imaging.nominal_defocus_max             ? 
_em_imaging.nominal_defocus_min             ? 
_em_imaging.nominal_magnification           ? 
_em_imaging.recording_temperature_maximum   ? 
_em_imaging.recording_temperature_minimum   ? 
_em_imaging.residual_tilt                   ? 
_em_imaging.specimen_holder_model           ? 
_em_imaging.specimen_id                     1 
_em_imaging.citation_id                     ? 
_em_imaging.date                            ? 
_em_imaging.temperature                     ? 
_em_imaging.tilt_angle_min                  ? 
_em_imaging.tilt_angle_max                  ? 
_em_imaging.astigmatism                     ? 
_em_imaging.detector_distance               ? 
_em_imaging.electron_beam_tilt_params       ? 
_em_imaging.specimen_holder_type            ? 
# 
_em_virus_entity.entity_assembly_id    1 
_em_virus_entity.empty                 NO 
_em_virus_entity.enveloped             NO 
_em_virus_entity.virus_isolate         OTHER 
_em_virus_entity.virus_type            VIRION 
_em_virus_entity.id                    1 
_em_virus_entity.virus_host_category   ? 
_em_virus_entity.details               ? 
# 
_em_vitrification.id                    1 
_em_vitrification.specimen_id           1 
_em_vitrification.chamber_temperature   277 
_em_vitrification.cryogen_name          ETHANE 
_em_vitrification.details               ? 
_em_vitrification.humidity              100 
_em_vitrification.instrument            'FEI VITROBOT MARK IV' 
_em_vitrification.entry_id              7DOU 
_em_vitrification.citation_id           ? 
_em_vitrification.method                ? 
_em_vitrification.temp                  ? 
_em_vitrification.time_resolved_state   ? 
# 
_em_experiment.entry_id                7DOU 
_em_experiment.id                      1 
_em_experiment.aggregation_state       PARTICLE 
_em_experiment.reconstruction_method   'SINGLE PARTICLE' 
_em_experiment.entity_assembly_id      1 
# 
_em_single_particle_entity.entry_id              7DOU 
_em_single_particle_entity.id                    1 
_em_single_particle_entity.image_processing_id   1 
_em_single_particle_entity.point_symmetry        I 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
ALA N    N N N 1   
ALA CA   C N S 2   
ALA C    C N N 3   
ALA O    O N N 4   
ALA CB   C N N 5   
ALA OXT  O N N 6   
ALA H    H N N 7   
ALA H2   H N N 8   
ALA HA   H N N 9   
ALA HB1  H N N 10  
ALA HB2  H N N 11  
ALA HB3  H N N 12  
ALA HXT  H N N 13  
ARG N    N N N 14  
ARG CA   C N S 15  
ARG C    C N N 16  
ARG O    O N N 17  
ARG CB   C N N 18  
ARG CG   C N N 19  
ARG CD   C N N 20  
ARG NE   N N N 21  
ARG CZ   C N N 22  
ARG NH1  N N N 23  
ARG NH2  N N N 24  
ARG OXT  O N N 25  
ARG H    H N N 26  
ARG H2   H N N 27  
ARG HA   H N N 28  
ARG HB2  H N N 29  
ARG HB3  H N N 30  
ARG HG2  H N N 31  
ARG HG3  H N N 32  
ARG HD2  H N N 33  
ARG HD3  H N N 34  
ARG HE   H N N 35  
ARG HH11 H N N 36  
ARG HH12 H N N 37  
ARG HH21 H N N 38  
ARG HH22 H N N 39  
ARG HXT  H N N 40  
ASN N    N N N 41  
ASN CA   C N S 42  
ASN C    C N N 43  
ASN O    O N N 44  
ASN CB   C N N 45  
ASN CG   C N N 46  
ASN OD1  O N N 47  
ASN ND2  N N N 48  
ASN OXT  O N N 49  
ASN H    H N N 50  
ASN H2   H N N 51  
ASN HA   H N N 52  
ASN HB2  H N N 53  
ASN HB3  H N N 54  
ASN HD21 H N N 55  
ASN HD22 H N N 56  
ASN HXT  H N N 57  
ASP N    N N N 58  
ASP CA   C N S 59  
ASP C    C N N 60  
ASP O    O N N 61  
ASP CB   C N N 62  
ASP CG   C N N 63  
ASP OD1  O N N 64  
ASP OD2  O N N 65  
ASP OXT  O N N 66  
ASP H    H N N 67  
ASP H2   H N N 68  
ASP HA   H N N 69  
ASP HB2  H N N 70  
ASP HB3  H N N 71  
ASP HD2  H N N 72  
ASP HXT  H N N 73  
CYS N    N N N 74  
CYS CA   C N R 75  
CYS C    C N N 76  
CYS O    O N N 77  
CYS CB   C N N 78  
CYS SG   S N N 79  
CYS OXT  O N N 80  
CYS H    H N N 81  
CYS H2   H N N 82  
CYS HA   H N N 83  
CYS HB2  H N N 84  
CYS HB3  H N N 85  
CYS HG   H N N 86  
CYS HXT  H N N 87  
GLN N    N N N 88  
GLN CA   C N S 89  
GLN C    C N N 90  
GLN O    O N N 91  
GLN CB   C N N 92  
GLN CG   C N N 93  
GLN CD   C N N 94  
GLN OE1  O N N 95  
GLN NE2  N N N 96  
GLN OXT  O N N 97  
GLN H    H N N 98  
GLN H2   H N N 99  
GLN HA   H N N 100 
GLN HB2  H N N 101 
GLN HB3  H N N 102 
GLN HG2  H N N 103 
GLN HG3  H N N 104 
GLN HE21 H N N 105 
GLN HE22 H N N 106 
GLN HXT  H N N 107 
GLU N    N N N 108 
GLU CA   C N S 109 
GLU C    C N N 110 
GLU O    O N N 111 
GLU CB   C N N 112 
GLU CG   C N N 113 
GLU CD   C N N 114 
GLU OE1  O N N 115 
GLU OE2  O N N 116 
GLU OXT  O N N 117 
GLU H    H N N 118 
GLU H2   H N N 119 
GLU HA   H N N 120 
GLU HB2  H N N 121 
GLU HB3  H N N 122 
GLU HG2  H N N 123 
GLU HG3  H N N 124 
GLU HE2  H N N 125 
GLU HXT  H N N 126 
GLY N    N N N 127 
GLY CA   C N N 128 
GLY C    C N N 129 
GLY O    O N N 130 
GLY OXT  O N N 131 
GLY H    H N N 132 
GLY H2   H N N 133 
GLY HA2  H N N 134 
GLY HA3  H N N 135 
GLY HXT  H N N 136 
HIS N    N N N 137 
HIS CA   C N S 138 
HIS C    C N N 139 
HIS O    O N N 140 
HIS CB   C N N 141 
HIS CG   C Y N 142 
HIS ND1  N Y N 143 
HIS CD2  C Y N 144 
HIS CE1  C Y N 145 
HIS NE2  N Y N 146 
HIS OXT  O N N 147 
HIS H    H N N 148 
HIS H2   H N N 149 
HIS HA   H N N 150 
HIS HB2  H N N 151 
HIS HB3  H N N 152 
HIS HD1  H N N 153 
HIS HD2  H N N 154 
HIS HE1  H N N 155 
HIS HE2  H N N 156 
HIS HXT  H N N 157 
ILE N    N N N 158 
ILE CA   C N S 159 
ILE C    C N N 160 
ILE O    O N N 161 
ILE CB   C N S 162 
ILE CG1  C N N 163 
ILE CG2  C N N 164 
ILE CD1  C N N 165 
ILE OXT  O N N 166 
ILE H    H N N 167 
ILE H2   H N N 168 
ILE HA   H N N 169 
ILE HB   H N N 170 
ILE HG12 H N N 171 
ILE HG13 H N N 172 
ILE HG21 H N N 173 
ILE HG22 H N N 174 
ILE HG23 H N N 175 
ILE HD11 H N N 176 
ILE HD12 H N N 177 
ILE HD13 H N N 178 
ILE HXT  H N N 179 
LEU N    N N N 180 
LEU CA   C N S 181 
LEU C    C N N 182 
LEU O    O N N 183 
LEU CB   C N N 184 
LEU CG   C N N 185 
LEU CD1  C N N 186 
LEU CD2  C N N 187 
LEU OXT  O N N 188 
LEU H    H N N 189 
LEU H2   H N N 190 
LEU HA   H N N 191 
LEU HB2  H N N 192 
LEU HB3  H N N 193 
LEU HG   H N N 194 
LEU HD11 H N N 195 
LEU HD12 H N N 196 
LEU HD13 H N N 197 
LEU HD21 H N N 198 
LEU HD22 H N N 199 
LEU HD23 H N N 200 
LEU HXT  H N N 201 
LYS N    N N N 202 
LYS CA   C N S 203 
LYS C    C N N 204 
LYS O    O N N 205 
LYS CB   C N N 206 
LYS CG   C N N 207 
LYS CD   C N N 208 
LYS CE   C N N 209 
LYS NZ   N N N 210 
LYS OXT  O N N 211 
LYS H    H N N 212 
LYS H2   H N N 213 
LYS HA   H N N 214 
LYS HB2  H N N 215 
LYS HB3  H N N 216 
LYS HG2  H N N 217 
LYS HG3  H N N 218 
LYS HD2  H N N 219 
LYS HD3  H N N 220 
LYS HE2  H N N 221 
LYS HE3  H N N 222 
LYS HZ1  H N N 223 
LYS HZ2  H N N 224 
LYS HZ3  H N N 225 
LYS HXT  H N N 226 
MET N    N N N 227 
MET CA   C N S 228 
MET C    C N N 229 
MET O    O N N 230 
MET CB   C N N 231 
MET CG   C N N 232 
MET SD   S N N 233 
MET CE   C N N 234 
MET OXT  O N N 235 
MET H    H N N 236 
MET H2   H N N 237 
MET HA   H N N 238 
MET HB2  H N N 239 
MET HB3  H N N 240 
MET HG2  H N N 241 
MET HG3  H N N 242 
MET HE1  H N N 243 
MET HE2  H N N 244 
MET HE3  H N N 245 
MET HXT  H N N 246 
PHE N    N N N 247 
PHE CA   C N S 248 
PHE C    C N N 249 
PHE O    O N N 250 
PHE CB   C N N 251 
PHE CG   C Y N 252 
PHE CD1  C Y N 253 
PHE CD2  C Y N 254 
PHE CE1  C Y N 255 
PHE CE2  C Y N 256 
PHE CZ   C Y N 257 
PHE OXT  O N N 258 
PHE H    H N N 259 
PHE H2   H N N 260 
PHE HA   H N N 261 
PHE HB2  H N N 262 
PHE HB3  H N N 263 
PHE HD1  H N N 264 
PHE HD2  H N N 265 
PHE HE1  H N N 266 
PHE HE2  H N N 267 
PHE HZ   H N N 268 
PHE HXT  H N N 269 
PRO N    N N N 270 
PRO CA   C N S 271 
PRO C    C N N 272 
PRO O    O N N 273 
PRO CB   C N N 274 
PRO CG   C N N 275 
PRO CD   C N N 276 
PRO OXT  O N N 277 
PRO H    H N N 278 
PRO HA   H N N 279 
PRO HB2  H N N 280 
PRO HB3  H N N 281 
PRO HG2  H N N 282 
PRO HG3  H N N 283 
PRO HD2  H N N 284 
PRO HD3  H N N 285 
PRO HXT  H N N 286 
SER N    N N N 287 
SER CA   C N S 288 
SER C    C N N 289 
SER O    O N N 290 
SER CB   C N N 291 
SER OG   O N N 292 
SER OXT  O N N 293 
SER H    H N N 294 
SER H2   H N N 295 
SER HA   H N N 296 
SER HB2  H N N 297 
SER HB3  H N N 298 
SER HG   H N N 299 
SER HXT  H N N 300 
THR N    N N N 301 
THR CA   C N S 302 
THR C    C N N 303 
THR O    O N N 304 
THR CB   C N R 305 
THR OG1  O N N 306 
THR CG2  C N N 307 
THR OXT  O N N 308 
THR H    H N N 309 
THR H2   H N N 310 
THR HA   H N N 311 
THR HB   H N N 312 
THR HG1  H N N 313 
THR HG21 H N N 314 
THR HG22 H N N 315 
THR HG23 H N N 316 
THR HXT  H N N 317 
TYR N    N N N 318 
TYR CA   C N S 319 
TYR C    C N N 320 
TYR O    O N N 321 
TYR CB   C N N 322 
TYR CG   C Y N 323 
TYR CD1  C Y N 324 
TYR CD2  C Y N 325 
TYR CE1  C Y N 326 
TYR CE2  C Y N 327 
TYR CZ   C Y N 328 
TYR OH   O N N 329 
TYR OXT  O N N 330 
TYR H    H N N 331 
TYR H2   H N N 332 
TYR HA   H N N 333 
TYR HB2  H N N 334 
TYR HB3  H N N 335 
TYR HD1  H N N 336 
TYR HD2  H N N 337 
TYR HE1  H N N 338 
TYR HE2  H N N 339 
TYR HH   H N N 340 
TYR HXT  H N N 341 
VAL N    N N N 342 
VAL CA   C N S 343 
VAL C    C N N 344 
VAL O    O N N 345 
VAL CB   C N N 346 
VAL CG1  C N N 347 
VAL CG2  C N N 348 
VAL OXT  O N N 349 
VAL H    H N N 350 
VAL H2   H N N 351 
VAL HA   H N N 352 
VAL HB   H N N 353 
VAL HG11 H N N 354 
VAL HG12 H N N 355 
VAL HG13 H N N 356 
VAL HG21 H N N 357 
VAL HG22 H N N 358 
VAL HG23 H N N 359 
VAL HXT  H N N 360 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ALA N   CA   sing N N 1   
ALA N   H    sing N N 2   
ALA N   H2   sing N N 3   
ALA CA  C    sing N N 4   
ALA CA  CB   sing N N 5   
ALA CA  HA   sing N N 6   
ALA C   O    doub N N 7   
ALA C   OXT  sing N N 8   
ALA CB  HB1  sing N N 9   
ALA CB  HB2  sing N N 10  
ALA CB  HB3  sing N N 11  
ALA OXT HXT  sing N N 12  
ARG N   CA   sing N N 13  
ARG N   H    sing N N 14  
ARG N   H2   sing N N 15  
ARG CA  C    sing N N 16  
ARG CA  CB   sing N N 17  
ARG CA  HA   sing N N 18  
ARG C   O    doub N N 19  
ARG C   OXT  sing N N 20  
ARG CB  CG   sing N N 21  
ARG CB  HB2  sing N N 22  
ARG CB  HB3  sing N N 23  
ARG CG  CD   sing N N 24  
ARG CG  HG2  sing N N 25  
ARG CG  HG3  sing N N 26  
ARG CD  NE   sing N N 27  
ARG CD  HD2  sing N N 28  
ARG CD  HD3  sing N N 29  
ARG NE  CZ   sing N N 30  
ARG NE  HE   sing N N 31  
ARG CZ  NH1  sing N N 32  
ARG CZ  NH2  doub N N 33  
ARG NH1 HH11 sing N N 34  
ARG NH1 HH12 sing N N 35  
ARG NH2 HH21 sing N N 36  
ARG NH2 HH22 sing N N 37  
ARG OXT HXT  sing N N 38  
ASN N   CA   sing N N 39  
ASN N   H    sing N N 40  
ASN N   H2   sing N N 41  
ASN CA  C    sing N N 42  
ASN CA  CB   sing N N 43  
ASN CA  HA   sing N N 44  
ASN C   O    doub N N 45  
ASN C   OXT  sing N N 46  
ASN CB  CG   sing N N 47  
ASN CB  HB2  sing N N 48  
ASN CB  HB3  sing N N 49  
ASN CG  OD1  doub N N 50  
ASN CG  ND2  sing N N 51  
ASN ND2 HD21 sing N N 52  
ASN ND2 HD22 sing N N 53  
ASN OXT HXT  sing N N 54  
ASP N   CA   sing N N 55  
ASP N   H    sing N N 56  
ASP N   H2   sing N N 57  
ASP CA  C    sing N N 58  
ASP CA  CB   sing N N 59  
ASP CA  HA   sing N N 60  
ASP C   O    doub N N 61  
ASP C   OXT  sing N N 62  
ASP CB  CG   sing N N 63  
ASP CB  HB2  sing N N 64  
ASP CB  HB3  sing N N 65  
ASP CG  OD1  doub N N 66  
ASP CG  OD2  sing N N 67  
ASP OD2 HD2  sing N N 68  
ASP OXT HXT  sing N N 69  
CYS N   CA   sing N N 70  
CYS N   H    sing N N 71  
CYS N   H2   sing N N 72  
CYS CA  C    sing N N 73  
CYS CA  CB   sing N N 74  
CYS CA  HA   sing N N 75  
CYS C   O    doub N N 76  
CYS C   OXT  sing N N 77  
CYS CB  SG   sing N N 78  
CYS CB  HB2  sing N N 79  
CYS CB  HB3  sing N N 80  
CYS SG  HG   sing N N 81  
CYS OXT HXT  sing N N 82  
GLN N   CA   sing N N 83  
GLN N   H    sing N N 84  
GLN N   H2   sing N N 85  
GLN CA  C    sing N N 86  
GLN CA  CB   sing N N 87  
GLN CA  HA   sing N N 88  
GLN C   O    doub N N 89  
GLN C   OXT  sing N N 90  
GLN CB  CG   sing N N 91  
GLN CB  HB2  sing N N 92  
GLN CB  HB3  sing N N 93  
GLN CG  CD   sing N N 94  
GLN CG  HG2  sing N N 95  
GLN CG  HG3  sing N N 96  
GLN CD  OE1  doub N N 97  
GLN CD  NE2  sing N N 98  
GLN NE2 HE21 sing N N 99  
GLN NE2 HE22 sing N N 100 
GLN OXT HXT  sing N N 101 
GLU N   CA   sing N N 102 
GLU N   H    sing N N 103 
GLU N   H2   sing N N 104 
GLU CA  C    sing N N 105 
GLU CA  CB   sing N N 106 
GLU CA  HA   sing N N 107 
GLU C   O    doub N N 108 
GLU C   OXT  sing N N 109 
GLU CB  CG   sing N N 110 
GLU CB  HB2  sing N N 111 
GLU CB  HB3  sing N N 112 
GLU CG  CD   sing N N 113 
GLU CG  HG2  sing N N 114 
GLU CG  HG3  sing N N 115 
GLU CD  OE1  doub N N 116 
GLU CD  OE2  sing N N 117 
GLU OE2 HE2  sing N N 118 
GLU OXT HXT  sing N N 119 
GLY N   CA   sing N N 120 
GLY N   H    sing N N 121 
GLY N   H2   sing N N 122 
GLY CA  C    sing N N 123 
GLY CA  HA2  sing N N 124 
GLY CA  HA3  sing N N 125 
GLY C   O    doub N N 126 
GLY C   OXT  sing N N 127 
GLY OXT HXT  sing N N 128 
HIS N   CA   sing N N 129 
HIS N   H    sing N N 130 
HIS N   H2   sing N N 131 
HIS CA  C    sing N N 132 
HIS CA  CB   sing N N 133 
HIS CA  HA   sing N N 134 
HIS C   O    doub N N 135 
HIS C   OXT  sing N N 136 
HIS CB  CG   sing N N 137 
HIS CB  HB2  sing N N 138 
HIS CB  HB3  sing N N 139 
HIS CG  ND1  sing Y N 140 
HIS CG  CD2  doub Y N 141 
HIS ND1 CE1  doub Y N 142 
HIS ND1 HD1  sing N N 143 
HIS CD2 NE2  sing Y N 144 
HIS CD2 HD2  sing N N 145 
HIS CE1 NE2  sing Y N 146 
HIS CE1 HE1  sing N N 147 
HIS NE2 HE2  sing N N 148 
HIS OXT HXT  sing N N 149 
ILE N   CA   sing N N 150 
ILE N   H    sing N N 151 
ILE N   H2   sing N N 152 
ILE CA  C    sing N N 153 
ILE CA  CB   sing N N 154 
ILE CA  HA   sing N N 155 
ILE C   O    doub N N 156 
ILE C   OXT  sing N N 157 
ILE CB  CG1  sing N N 158 
ILE CB  CG2  sing N N 159 
ILE CB  HB   sing N N 160 
ILE CG1 CD1  sing N N 161 
ILE CG1 HG12 sing N N 162 
ILE CG1 HG13 sing N N 163 
ILE CG2 HG21 sing N N 164 
ILE CG2 HG22 sing N N 165 
ILE CG2 HG23 sing N N 166 
ILE CD1 HD11 sing N N 167 
ILE CD1 HD12 sing N N 168 
ILE CD1 HD13 sing N N 169 
ILE OXT HXT  sing N N 170 
LEU N   CA   sing N N 171 
LEU N   H    sing N N 172 
LEU N   H2   sing N N 173 
LEU CA  C    sing N N 174 
LEU CA  CB   sing N N 175 
LEU CA  HA   sing N N 176 
LEU C   O    doub N N 177 
LEU C   OXT  sing N N 178 
LEU CB  CG   sing N N 179 
LEU CB  HB2  sing N N 180 
LEU CB  HB3  sing N N 181 
LEU CG  CD1  sing N N 182 
LEU CG  CD2  sing N N 183 
LEU CG  HG   sing N N 184 
LEU CD1 HD11 sing N N 185 
LEU CD1 HD12 sing N N 186 
LEU CD1 HD13 sing N N 187 
LEU CD2 HD21 sing N N 188 
LEU CD2 HD22 sing N N 189 
LEU CD2 HD23 sing N N 190 
LEU OXT HXT  sing N N 191 
LYS N   CA   sing N N 192 
LYS N   H    sing N N 193 
LYS N   H2   sing N N 194 
LYS CA  C    sing N N 195 
LYS CA  CB   sing N N 196 
LYS CA  HA   sing N N 197 
LYS C   O    doub N N 198 
LYS C   OXT  sing N N 199 
LYS CB  CG   sing N N 200 
LYS CB  HB2  sing N N 201 
LYS CB  HB3  sing N N 202 
LYS CG  CD   sing N N 203 
LYS CG  HG2  sing N N 204 
LYS CG  HG3  sing N N 205 
LYS CD  CE   sing N N 206 
LYS CD  HD2  sing N N 207 
LYS CD  HD3  sing N N 208 
LYS CE  NZ   sing N N 209 
LYS CE  HE2  sing N N 210 
LYS CE  HE3  sing N N 211 
LYS NZ  HZ1  sing N N 212 
LYS NZ  HZ2  sing N N 213 
LYS NZ  HZ3  sing N N 214 
LYS OXT HXT  sing N N 215 
MET N   CA   sing N N 216 
MET N   H    sing N N 217 
MET N   H2   sing N N 218 
MET CA  C    sing N N 219 
MET CA  CB   sing N N 220 
MET CA  HA   sing N N 221 
MET C   O    doub N N 222 
MET C   OXT  sing N N 223 
MET CB  CG   sing N N 224 
MET CB  HB2  sing N N 225 
MET CB  HB3  sing N N 226 
MET CG  SD   sing N N 227 
MET CG  HG2  sing N N 228 
MET CG  HG3  sing N N 229 
MET SD  CE   sing N N 230 
MET CE  HE1  sing N N 231 
MET CE  HE2  sing N N 232 
MET CE  HE3  sing N N 233 
MET OXT HXT  sing N N 234 
PHE N   CA   sing N N 235 
PHE N   H    sing N N 236 
PHE N   H2   sing N N 237 
PHE CA  C    sing N N 238 
PHE CA  CB   sing N N 239 
PHE CA  HA   sing N N 240 
PHE C   O    doub N N 241 
PHE C   OXT  sing N N 242 
PHE CB  CG   sing N N 243 
PHE CB  HB2  sing N N 244 
PHE CB  HB3  sing N N 245 
PHE CG  CD1  doub Y N 246 
PHE CG  CD2  sing Y N 247 
PHE CD1 CE1  sing Y N 248 
PHE CD1 HD1  sing N N 249 
PHE CD2 CE2  doub Y N 250 
PHE CD2 HD2  sing N N 251 
PHE CE1 CZ   doub Y N 252 
PHE CE1 HE1  sing N N 253 
PHE CE2 CZ   sing Y N 254 
PHE CE2 HE2  sing N N 255 
PHE CZ  HZ   sing N N 256 
PHE OXT HXT  sing N N 257 
PRO N   CA   sing N N 258 
PRO N   CD   sing N N 259 
PRO N   H    sing N N 260 
PRO CA  C    sing N N 261 
PRO CA  CB   sing N N 262 
PRO CA  HA   sing N N 263 
PRO C   O    doub N N 264 
PRO C   OXT  sing N N 265 
PRO CB  CG   sing N N 266 
PRO CB  HB2  sing N N 267 
PRO CB  HB3  sing N N 268 
PRO CG  CD   sing N N 269 
PRO CG  HG2  sing N N 270 
PRO CG  HG3  sing N N 271 
PRO CD  HD2  sing N N 272 
PRO CD  HD3  sing N N 273 
PRO OXT HXT  sing N N 274 
SER N   CA   sing N N 275 
SER N   H    sing N N 276 
SER N   H2   sing N N 277 
SER CA  C    sing N N 278 
SER CA  CB   sing N N 279 
SER CA  HA   sing N N 280 
SER C   O    doub N N 281 
SER C   OXT  sing N N 282 
SER CB  OG   sing N N 283 
SER CB  HB2  sing N N 284 
SER CB  HB3  sing N N 285 
SER OG  HG   sing N N 286 
SER OXT HXT  sing N N 287 
THR N   CA   sing N N 288 
THR N   H    sing N N 289 
THR N   H2   sing N N 290 
THR CA  C    sing N N 291 
THR CA  CB   sing N N 292 
THR CA  HA   sing N N 293 
THR C   O    doub N N 294 
THR C   OXT  sing N N 295 
THR CB  OG1  sing N N 296 
THR CB  CG2  sing N N 297 
THR CB  HB   sing N N 298 
THR OG1 HG1  sing N N 299 
THR CG2 HG21 sing N N 300 
THR CG2 HG22 sing N N 301 
THR CG2 HG23 sing N N 302 
THR OXT HXT  sing N N 303 
TYR N   CA   sing N N 304 
TYR N   H    sing N N 305 
TYR N   H2   sing N N 306 
TYR CA  C    sing N N 307 
TYR CA  CB   sing N N 308 
TYR CA  HA   sing N N 309 
TYR C   O    doub N N 310 
TYR C   OXT  sing N N 311 
TYR CB  CG   sing N N 312 
TYR CB  HB2  sing N N 313 
TYR CB  HB3  sing N N 314 
TYR CG  CD1  doub Y N 315 
TYR CG  CD2  sing Y N 316 
TYR CD1 CE1  sing Y N 317 
TYR CD1 HD1  sing N N 318 
TYR CD2 CE2  doub Y N 319 
TYR CD2 HD2  sing N N 320 
TYR CE1 CZ   doub Y N 321 
TYR CE1 HE1  sing N N 322 
TYR CE2 CZ   sing Y N 323 
TYR CE2 HE2  sing N N 324 
TYR CZ  OH   sing N N 325 
TYR OH  HH   sing N N 326 
TYR OXT HXT  sing N N 327 
VAL N   CA   sing N N 328 
VAL N   H    sing N N 329 
VAL N   H2   sing N N 330 
VAL CA  C    sing N N 331 
VAL CA  CB   sing N N 332 
VAL CA  HA   sing N N 333 
VAL C   O    doub N N 334 
VAL C   OXT  sing N N 335 
VAL CB  CG1  sing N N 336 
VAL CB  CG2  sing N N 337 
VAL CB  HB   sing N N 338 
VAL CG1 HG11 sing N N 339 
VAL CG1 HG12 sing N N 340 
VAL CG1 HG13 sing N N 341 
VAL CG2 HG21 sing N N 342 
VAL CG2 HG22 sing N N 343 
VAL CG2 HG23 sing N N 344 
VAL OXT HXT  sing N N 345 
# 
_em_ctf_correction.id                       1 
_em_ctf_correction.em_image_processing_id   1 
_em_ctf_correction.type                     'PHASE FLIPPING AND AMPLITUDE CORRECTION' 
_em_ctf_correction.details                  ? 
# 
_em_entity_assembly_molwt.entity_assembly_id   1 
_em_entity_assembly_molwt.id                   1 
_em_entity_assembly_molwt.experimental_flag    NO 
_em_entity_assembly_molwt.units                ? 
_em_entity_assembly_molwt.value                ? 
# 
_em_entity_assembly_naturalsource.id                   2 
_em_entity_assembly_naturalsource.entity_assembly_id   1 
_em_entity_assembly_naturalsource.cell                 ? 
_em_entity_assembly_naturalsource.cellular_location    ? 
_em_entity_assembly_naturalsource.ncbi_tax_id          1208236 
_em_entity_assembly_naturalsource.organ                ? 
_em_entity_assembly_naturalsource.organelle            ? 
_em_entity_assembly_naturalsource.organism             'Helicobacter phage KHP' 
_em_entity_assembly_naturalsource.strain               ? 
_em_entity_assembly_naturalsource.tissue               ? 
# 
_em_image_processing.id                   1 
_em_image_processing.image_recording_id   1 
_em_image_processing.details              ? 
# 
_em_image_recording.id                            1 
_em_image_recording.imaging_id                    1 
_em_image_recording.avg_electron_dose_per_image   20.0 
_em_image_recording.average_exposure_time         1.0 
_em_image_recording.details                       ? 
_em_image_recording.detector_mode                 ? 
_em_image_recording.film_or_detector_model        'FEI FALCON II (4k x 4k)' 
_em_image_recording.num_diffraction_images        ? 
_em_image_recording.num_grids_imaged              ? 
_em_image_recording.num_real_images               ? 
# 
loop_
_em_software.id 
_em_software.category 
_em_software.details 
_em_software.name 
_em_software.version 
_em_software.image_processing_id 
_em_software.fitting_id 
_em_software.imaging_id 
1  'PARTICLE SELECTION'       ? ?      ? 1 ? ? 
2  'IMAGE ACQUISITION'        ? ?      ? ? ? 1 
3  MASKING                    ? ?      ? ? ? ? 
4  'CTF CORRECTION'           ? ?      ? 1 ? ? 
5  'LAYERLINE INDEXING'       ? ?      ? ? ? ? 
6  'DIFFRACTION INDEXING'     ? ?      ? ? ? ? 
7  'MODEL FITTING'            ? ?      ? ? ? ? 
8  'MODEL REFINEMENT'         ? ?      ? ? ? ? 
9  OTHER                      ? ?      ? ? ? ? 
10 'INITIAL EULER ASSIGNMENT' ? ?      ? 1 ? ? 
11 'FINAL EULER ASSIGNMENT'   ? ?      ? 1 ? ? 
12 CLASSIFICATION             ? ?      ? 1 ? ? 
13 RECONSTRUCTION             ? RELION ? 1 ? ? 
# 
_em_specimen.id                      1 
_em_specimen.experiment_id           1 
_em_specimen.concentration           ? 
_em_specimen.details                 ? 
_em_specimen.embedding_applied       NO 
_em_specimen.shadowing_applied       NO 
_em_specimen.staining_applied        NO 
_em_specimen.vitrification_applied   YES 
# 
_em_virus_shell.id                   1 
_em_virus_shell.entity_assembly_id   1 
_em_virus_shell.diameter             700 
_em_virus_shell.name                 Head 
_em_virus_shell.triangulation        9 
# 
loop_
_pdbx_audit_support.funding_organization 
_pdbx_audit_support.country 
_pdbx_audit_support.grant_number 
_pdbx_audit_support.ordinal 
'Japan Society for the Promotion of Science (JSPS)' Japan 15K18521 1 
'Japan Society for the Promotion of Science (JSPS)' Japan 18K06154 2 
# 
_atom_sites.entry_id                    7DOU 
_atom_sites.Cartn_transf_matrix[1][1]   ? 
_atom_sites.Cartn_transf_matrix[1][2]   ? 
_atom_sites.Cartn_transf_matrix[1][3]   ? 
_atom_sites.Cartn_transf_matrix[2][1]   ? 
_atom_sites.Cartn_transf_matrix[2][2]   ? 
_atom_sites.Cartn_transf_matrix[2][3]   ? 
_atom_sites.Cartn_transf_matrix[3][1]   ? 
_atom_sites.Cartn_transf_matrix[3][2]   ? 
_atom_sites.Cartn_transf_matrix[3][3]   ? 
_atom_sites.Cartn_transf_vector[1]      ? 
_atom_sites.Cartn_transf_vector[2]      ? 
_atom_sites.Cartn_transf_vector[3]      ? 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
_atom_sites.solution_primary            ? 
_atom_sites.solution_secondary          ? 
_atom_sites.solution_hydrogens          ? 
_atom_sites.special_details             ? 
# 
loop_
_atom_type.symbol 
C 
N 
O 
S 
# 
loop_