HEADER LIPID TRANSPORT 30-DEC-20 7DRX TITLE CRYO-EM STRUCTURE OF DNF1 FROM SACCHAROMYCES CEREVISIAE IN 90PS WITH TITLE 2 BERYLLIUM FLUORIDE (E2P STATE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOLIPID-TRANSPORTING ATPASE DNF1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FLIPPASE DNF1; COMPND 5 EC: 7.6.2.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ALKYLPHOSPHOCHOLINE RESISTANCE PROTEIN LEM3; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: BREFELDIN-A SENSITIVITY PROTEIN 3,RO-SENSITIVE 3; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 3 ORGANISM_TAXID: 559292; SOURCE 4 STRAIN: ATCC 204508 / S288C; SOURCE 5 GENE: DNF1, YER166W, SYGP-ORF7; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE S288C; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 559292; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 10 ORGANISM_TAXID: 559292; SOURCE 11 STRAIN: ATCC 204508 / S288C; SOURCE 12 GENE: LEM3, BRE3, ROS3, YNL323W, N0333; SOURCE 13 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE S288C; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 559292 KEYWDS P4-ATPASES, LIPID TRANSPORT EXPDTA ELECTRON MICROSCOPY AUTHOR J.XU,Y.HE,X.WU,L.LI REVDAT 3 23-OCT-24 7DRX 1 REMARK REVDAT 2 30-MAR-22 7DRX 1 JRNL REVDAT 1 23-MAR-22 7DRX 0 JRNL AUTH J.XU,Y.HE,X.WU,L.LI JRNL TITL CONFORMATIONAL CHANGES OF A PHOSPHATIDYLCHOLINE FLIPPASE IN JRNL TITL 2 LIPID MEMBRANES. JRNL REF CELL REP V. 38 10518 2022 JRNL REFN ESSN 2211-1247 JRNL PMID 35294892 JRNL DOI 10.1016/J.CELREP.2022.110518 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.900 REMARK 3 NUMBER OF PARTICLES : 394420 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7DRX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1300020007. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DNF1_LEM3 COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 BASE (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 800.00 REMARK 245 ILLUMINATION MODE : SPOT SCAN REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 THR A 4 REMARK 465 PHE A 5 REMARK 465 HIS A 6 REMARK 465 GLY A 7 REMARK 465 ASP A 8 REMARK 465 GLY A 9 REMARK 465 HIS A 10 REMARK 465 ALA A 11 REMARK 465 PRO A 12 REMARK 465 MET A 13 REMARK 465 SER A 14 REMARK 465 PRO A 15 REMARK 465 PHE A 16 REMARK 465 GLU A 17 REMARK 465 ASP A 18 REMARK 465 THR A 19 REMARK 465 PHE A 20 REMARK 465 GLN A 21 REMARK 465 PHE A 22 REMARK 465 GLU A 23 REMARK 465 ASP A 24 REMARK 465 ASN A 25 REMARK 465 SER A 26 REMARK 465 SER A 27 REMARK 465 ASN A 28 REMARK 465 GLU A 29 REMARK 465 ASP A 30 REMARK 465 THR A 31 REMARK 465 HIS A 32 REMARK 465 ILE A 33 REMARK 465 ALA A 34 REMARK 465 PRO A 35 REMARK 465 THR A 36 REMARK 465 HIS A 37 REMARK 465 PHE A 38 REMARK 465 ASP A 39 REMARK 465 ASP A 40 REMARK 465 GLY A 41 REMARK 465 ALA A 42 REMARK 465 THR A 43 REMARK 465 SER A 44 REMARK 465 ASN A 45 REMARK 465 LYS A 46 REMARK 465 TYR A 47 REMARK 465 SER A 48 REMARK 465 ARG A 49 REMARK 465 PRO A 50 REMARK 465 GLN A 51 REMARK 465 VAL A 52 REMARK 465 SER A 53 REMARK 465 PHE A 54 REMARK 465 ASN A 55 REMARK 465 ASP A 56 REMARK 465 GLU A 57 REMARK 465 THR A 58 REMARK 465 PRO A 59 REMARK 465 LYS A 60 REMARK 465 ASN A 61 REMARK 465 LYS A 62 REMARK 465 ARG A 63 REMARK 465 GLU A 64 REMARK 465 ASP A 65 REMARK 465 ALA A 66 REMARK 465 GLU A 67 REMARK 465 GLU A 68 REMARK 465 PHE A 69 REMARK 465 THR A 70 REMARK 465 PHE A 71 REMARK 465 ASN A 72 REMARK 465 ASP A 73 REMARK 465 ASP A 74 REMARK 465 THR A 75 REMARK 465 GLU A 76 REMARK 465 TYR A 77 REMARK 465 ASP A 78 REMARK 465 ASN A 79 REMARK 465 HIS A 80 REMARK 465 SER A 81 REMARK 465 PHE A 82 REMARK 465 GLN A 83 REMARK 465 PRO A 84 REMARK 465 THR A 85 REMARK 465 PRO A 86 REMARK 465 LYS A 87 REMARK 465 LEU A 88 REMARK 465 ASN A 89 REMARK 465 ASN A 90 REMARK 465 GLY A 91 REMARK 465 SER A 92 REMARK 465 GLY A 93 REMARK 465 THR A 94 REMARK 465 PHE A 95 REMARK 465 ASP A 96 REMARK 465 ASP A 97 REMARK 465 VAL A 98 REMARK 465 GLU A 99 REMARK 465 LEU A 100 REMARK 465 ASP A 101 REMARK 465 ASN A 102 REMARK 465 ASP A 103 REMARK 465 SER A 104 REMARK 465 GLY A 105 REMARK 465 GLU A 106 REMARK 465 PRO A 107 REMARK 465 HIS A 108 REMARK 465 THR A 109 REMARK 465 ASN A 110 REMARK 465 TYR A 111 REMARK 465 ASP A 112 REMARK 465 GLY A 113 REMARK 465 MET A 114 REMARK 465 LYS A 115 REMARK 465 ARG A 116 REMARK 465 PHE A 117 REMARK 465 ARG A 118 REMARK 465 MET A 119 REMARK 465 GLY A 120 REMARK 465 THR A 121 REMARK 465 LYS A 122 REMARK 465 ARG A 123 REMARK 465 ASN A 124 REMARK 465 LYS A 125 REMARK 465 LYS A 126 REMARK 465 GLY A 127 REMARK 465 ASN A 128 REMARK 465 PRO A 129 REMARK 465 ILE A 130 REMARK 465 MET A 131 REMARK 465 GLY A 132 REMARK 465 ARG A 133 REMARK 465 SER A 134 REMARK 465 LYS A 135 REMARK 465 THR A 136 REMARK 465 LEU A 137 REMARK 465 LYS A 138 REMARK 465 TRP A 139 REMARK 465 ALA A 140 REMARK 465 ARG A 141 REMARK 465 LYS A 142 REMARK 465 ASN A 143 REMARK 465 ILE A 144 REMARK 465 PRO A 145 REMARK 465 ASN A 146 REMARK 465 PRO A 147 REMARK 465 PHE A 148 REMARK 465 GLU A 149 REMARK 465 ASP A 150 REMARK 465 PHE A 151 REMARK 465 THR A 152 REMARK 465 LYS A 153 REMARK 465 ASP A 154 REMARK 465 ASP A 155 REMARK 465 ILE A 156 REMARK 465 ASP A 157 REMARK 465 PRO A 158 REMARK 465 GLY A 159 REMARK 465 ALA A 160 REMARK 465 ILE A 161 REMARK 465 ASN A 162 REMARK 465 ARG A 163 REMARK 465 ALA A 164 REMARK 465 GLN A 165 REMARK 465 GLU A 166 REMARK 465 ASP A 291 REMARK 465 ASN A 292 REMARK 465 ILE A 293 REMARK 465 SER A 294 REMARK 465 LEU A 295 REMARK 465 TRP A 296 REMARK 465 ARG A 297 REMARK 465 ARG A 298 REMARK 465 PHE A 299 REMARK 465 LYS A 300 REMARK 465 LYS A 301 REMARK 465 ALA A 302 REMARK 465 ASN A 303 REMARK 465 SER A 304 REMARK 465 ARG A 305 REMARK 465 LEU A 306 REMARK 465 LEU A 307 REMARK 465 PHE A 308 REMARK 465 LYS A 309 REMARK 465 PHE A 310 REMARK 465 ILE A 311 REMARK 465 GLN A 312 REMARK 465 TYR A 313 REMARK 465 CYS A 314 REMARK 465 LYS A 315 REMARK 465 GLU A 316 REMARK 465 HIS A 317 REMARK 465 LEU A 318 REMARK 465 THR A 319 REMARK 465 GLU A 320 REMARK 465 GLU A 321 REMARK 465 GLY A 322 REMARK 465 LYS A 323 REMARK 465 LYS A 324 REMARK 465 LYS A 325 REMARK 465 ARG A 326 REMARK 465 MET A 327 REMARK 465 GLN A 328 REMARK 465 ARG A 329 REMARK 465 LYS A 330 REMARK 465 ARG A 331 REMARK 465 HIS A 332 REMARK 465 GLU A 333 REMARK 465 LEU A 334 REMARK 465 ARG A 335 REMARK 465 VAL A 336 REMARK 465 GLN A 337 REMARK 465 LYS A 338 REMARK 465 THR A 339 REMARK 465 VAL A 340 REMARK 465 GLY A 341 REMARK 465 THR A 342 REMARK 465 SER A 343 REMARK 465 GLY A 344 REMARK 465 PRO A 345 REMARK 465 ARG A 346 REMARK 465 SER A 347 REMARK 465 SER A 348 REMARK 465 LEU A 349 REMARK 465 ASP A 350 REMARK 465 SER A 351 REMARK 465 ILE A 352 REMARK 465 ASP A 353 REMARK 465 SER A 354 REMARK 465 TYR A 355 REMARK 465 ARG A 356 REMARK 465 VAL A 357 REMARK 465 SER A 358 REMARK 465 ALA A 359 REMARK 465 ASP A 360 REMARK 465 TYR A 361 REMARK 465 GLY A 362 REMARK 465 ARG A 363 REMARK 465 PRO A 364 REMARK 465 SER A 365 REMARK 465 LEU A 366 REMARK 465 ASP A 367 REMARK 465 TYR A 368 REMARK 465 ASP A 369 REMARK 465 ASN A 370 REMARK 465 LEU A 371 REMARK 465 GLU A 372 REMARK 465 GLN A 373 REMARK 465 GLY A 374 REMARK 465 ALA A 375 REMARK 465 GLY A 376 REMARK 465 GLU A 377 REMARK 465 ALA A 378 REMARK 465 ASN A 379 REMARK 465 ILE A 380 REMARK 465 VAL A 381 REMARK 465 ASP A 382 REMARK 465 ARG A 383 REMARK 465 SER A 384 REMARK 465 LEU A 385 REMARK 465 PRO A 386 REMARK 465 PRO A 387 REMARK 465 ARG A 388 REMARK 465 THR A 389 REMARK 465 THR A 1438 REMARK 465 LYS A 1439 REMARK 465 ALA A 1440 REMARK 465 GLY A 1441 REMARK 465 GLN A 1442 REMARK 465 HIS A 1443 REMARK 465 GLY A 1444 REMARK 465 GLU A 1445 REMARK 465 LYS A 1446 REMARK 465 ILE A 1447 REMARK 465 ILE A 1448 REMARK 465 GLU A 1449 REMARK 465 GLY A 1450 REMARK 465 ILE A 1451 REMARK 465 ALA A 1452 REMARK 465 LEU A 1453 REMARK 465 SER A 1454 REMARK 465 ASP A 1455 REMARK 465 ASN A 1456 REMARK 465 LEU A 1457 REMARK 465 GLY A 1458 REMARK 465 GLY A 1459 REMARK 465 SER A 1460 REMARK 465 ASN A 1461 REMARK 465 TYR A 1462 REMARK 465 SER A 1463 REMARK 465 ARG A 1464 REMARK 465 ASP A 1465 REMARK 465 SER A 1466 REMARK 465 VAL A 1467 REMARK 465 VAL A 1468 REMARK 465 THR A 1469 REMARK 465 GLU A 1470 REMARK 465 GLU A 1471 REMARK 465 ILE A 1472 REMARK 465 PRO A 1473 REMARK 465 MET A 1474 REMARK 465 THR A 1475 REMARK 465 PHE A 1476 REMARK 465 MET A 1477 REMARK 465 HIS A 1478 REMARK 465 GLY A 1479 REMARK 465 GLU A 1480 REMARK 465 ASP A 1481 REMARK 465 GLY A 1482 REMARK 465 SER A 1483 REMARK 465 PRO A 1484 REMARK 465 SER A 1485 REMARK 465 GLY A 1486 REMARK 465 TYR A 1487 REMARK 465 GLN A 1488 REMARK 465 LYS A 1489 REMARK 465 GLN A 1490 REMARK 465 GLU A 1491 REMARK 465 THR A 1492 REMARK 465 TRP A 1493 REMARK 465 MET A 1494 REMARK 465 THR A 1495 REMARK 465 SER A 1496 REMARK 465 PRO A 1497 REMARK 465 LYS A 1498 REMARK 465 GLU A 1499 REMARK 465 THR A 1500 REMARK 465 GLN A 1501 REMARK 465 ASP A 1502 REMARK 465 LEU A 1503 REMARK 465 LEU A 1504 REMARK 465 GLN A 1505 REMARK 465 SER A 1506 REMARK 465 PRO A 1507 REMARK 465 GLN A 1508 REMARK 465 PHE A 1509 REMARK 465 GLN A 1510 REMARK 465 GLN A 1511 REMARK 465 ALA A 1512 REMARK 465 GLN A 1513 REMARK 465 THR A 1514 REMARK 465 PHE A 1515 REMARK 465 GLY A 1516 REMARK 465 ARG A 1517 REMARK 465 GLY A 1518 REMARK 465 PRO A 1519 REMARK 465 SER A 1520 REMARK 465 THR A 1521 REMARK 465 ASN A 1522 REMARK 465 VAL A 1523 REMARK 465 ARG A 1524 REMARK 465 SER A 1525 REMARK 465 SER A 1526 REMARK 465 LEU A 1527 REMARK 465 ASP A 1528 REMARK 465 ARG A 1529 REMARK 465 THR A 1530 REMARK 465 ARG A 1531 REMARK 465 GLU A 1532 REMARK 465 GLN A 1533 REMARK 465 MET A 1534 REMARK 465 ILE A 1535 REMARK 465 ALA A 1536 REMARK 465 THR A 1537 REMARK 465 ASN A 1538 REMARK 465 GLN A 1539 REMARK 465 LEU A 1540 REMARK 465 ASP A 1541 REMARK 465 ASN A 1542 REMARK 465 ARG A 1543 REMARK 465 TYR A 1544 REMARK 465 SER A 1545 REMARK 465 VAL A 1546 REMARK 465 GLU A 1547 REMARK 465 ARG A 1548 REMARK 465 ALA A 1549 REMARK 465 ARG A 1550 REMARK 465 THR A 1551 REMARK 465 SER A 1552 REMARK 465 LEU A 1553 REMARK 465 ASP A 1554 REMARK 465 LEU A 1555 REMARK 465 PRO A 1556 REMARK 465 GLY A 1557 REMARK 465 VAL A 1558 REMARK 465 THR A 1559 REMARK 465 ASN A 1560 REMARK 465 ALA A 1561 REMARK 465 ALA A 1562 REMARK 465 SER A 1563 REMARK 465 LEU A 1564 REMARK 465 ILE A 1565 REMARK 465 GLY A 1566 REMARK 465 THR A 1567 REMARK 465 GLN A 1568 REMARK 465 GLN A 1569 REMARK 465 ASN A 1570 REMARK 465 ASN A 1571 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ASN B 3 REMARK 465 PHE B 4 REMARK 465 ASP B 5 REMARK 465 LEU B 6 REMARK 465 GLY B 7 REMARK 465 GLN B 8 REMARK 465 VAL B 9 REMARK 465 GLY B 10 REMARK 465 GLU B 11 REMARK 465 VAL B 12 REMARK 465 PHE B 13 REMARK 465 ARG B 14 REMARK 465 ARG B 15 REMARK 465 LYS B 16 REMARK 465 ASP B 17 REMARK 465 LYS B 18 REMARK 465 GLY B 19 REMARK 465 ALA B 20 REMARK 465 ILE B 21 REMARK 465 VAL B 22 REMARK 465 SER B 23 REMARK 465 GLY B 24 REMARK 465 ASP B 25 REMARK 465 ASN B 26 REMARK 465 PRO B 27 REMARK 465 GLU B 28 REMARK 465 GLU B 29 REMARK 465 GLU B 30 REMARK 465 GLU B 31 REMARK 465 ASP B 32 REMARK 465 VAL B 33 REMARK 465 ASP B 34 REMARK 465 ALA B 35 REMARK 465 SER B 36 REMARK 465 GLU B 37 REMARK 465 PHE B 38 REMARK 465 GLU B 39 REMARK 465 GLU B 40 REMARK 465 ASP B 41 REMARK 465 GLU B 42 REMARK 465 VAL B 43 REMARK 465 LYS B 44 REMARK 465 PRO B 45 REMARK 465 VAL B 46 REMARK 465 ARG B 47 REMARK 465 THR B 48 REMARK 465 LYS B 49 REMARK 465 ASN B 412 REMARK 465 MET B 413 REMARK 465 LYS B 414 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE1 TYR A 585 C8 NAG C 1 1.49 REMARK 500 CD1 TYR A 585 C8 NAG C 1 1.92 REMARK 500 ND2 ASN B 240 O5 NAG C 1 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 184 54.12 39.60 REMARK 500 THR A 205 32.51 -95.97 REMARK 500 ASN A 239 75.28 52.68 REMARK 500 THR A 275 38.85 -143.81 REMARK 500 LYS A 276 66.58 61.65 REMARK 500 ASN A 285 49.34 -93.33 REMARK 500 THR A 435 50.36 -93.91 REMARK 500 THR A 453 50.96 -93.24 REMARK 500 THR A 501 -169.06 -125.85 REMARK 500 ASN A 534 32.70 -93.62 REMARK 500 LYS A 541 70.72 59.61 REMARK 500 PHE A 587 34.58 -96.46 REMARK 500 SER A 593 -4.43 68.22 REMARK 500 ASN A 597 32.05 -93.20 REMARK 500 VAL A 752 -56.55 -122.26 REMARK 500 ASN A 788 74.51 57.83 REMARK 500 GLN A 831 77.21 -100.53 REMARK 500 LEU A 937 56.79 -93.72 REMARK 500 GLU A 952 58.65 -100.69 REMARK 500 ASP A 991 -165.08 -116.56 REMARK 500 ASN A1007 -10.44 67.32 REMARK 500 ASN A1008 -10.18 69.90 REMARK 500 LYS A1016 71.31 59.58 REMARK 500 ASP A1020 52.62 -92.68 REMARK 500 PHE A1045 45.96 -90.76 REMARK 500 GLU A1051 -64.34 -103.71 REMARK 500 ASN A1067 57.91 -90.06 REMARK 500 ALA A1127 71.00 59.20 REMARK 500 VAL A1175 -62.11 -109.09 REMARK 500 ASN A1295 13.61 -142.63 REMARK 500 ARG A1333 74.68 59.59 REMARK 500 SER A1357 35.40 -95.89 REMARK 500 ARG A1363 -17.39 74.35 REMARK 500 GLU A1364 -7.94 -142.14 REMARK 500 ASN A1433 52.39 -94.28 REMARK 500 ALA B 57 -5.21 67.92 REMARK 500 ASN B 67 74.58 53.73 REMARK 500 ASN B 137 16.66 -140.52 REMARK 500 THR B 153 -2.06 64.88 REMARK 500 LYS B 170 -163.54 -77.67 REMARK 500 SER B 237 35.68 -94.06 REMARK 500 LYS B 357 117.23 -160.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE B 398 GLY B 399 148.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 VAL A1408 -10.73 REMARK 500 PHE B 398 -10.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 667 OD1 REMARK 620 2 ASP A 667 OD2 59.8 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-30829 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF DNF1 FROM SACCHAROMYCES CEREVISIAE IN THE E2P REMARK 900 STATE DBREF 7DRX A 1 1571 UNP P32660 ATC5_YEAST 1 1571 DBREF 7DRX B 1 414 UNP P42838 LEM3_YEAST 1 414 SEQRES 1 A 1571 MET SER GLY THR PHE HIS GLY ASP GLY HIS ALA PRO MET SEQRES 2 A 1571 SER PRO PHE GLU ASP THR PHE GLN PHE GLU ASP ASN SER SEQRES 3 A 1571 SER ASN GLU ASP THR HIS ILE ALA PRO THR HIS PHE ASP SEQRES 4 A 1571 ASP GLY ALA THR SER ASN LYS TYR SER ARG PRO GLN VAL SEQRES 5 A 1571 SER PHE ASN ASP GLU THR PRO LYS ASN LYS ARG GLU ASP SEQRES 6 A 1571 ALA GLU GLU PHE THR PHE ASN ASP ASP THR GLU TYR ASP SEQRES 7 A 1571 ASN HIS SER PHE GLN PRO THR PRO LYS LEU ASN ASN GLY SEQRES 8 A 1571 SER GLY THR PHE ASP ASP VAL GLU LEU ASP ASN ASP SER SEQRES 9 A 1571 GLY GLU PRO HIS THR ASN TYR ASP GLY MET LYS ARG PHE SEQRES 10 A 1571 ARG MET GLY THR LYS ARG ASN LYS LYS GLY ASN PRO ILE SEQRES 11 A 1571 MET GLY ARG SER LYS THR LEU LYS TRP ALA ARG LYS ASN SEQRES 12 A 1571 ILE PRO ASN PRO PHE GLU ASP PHE THR LYS ASP ASP ILE SEQRES 13 A 1571 ASP PRO GLY ALA ILE ASN ARG ALA GLN GLU LEU ARG THR SEQRES 14 A 1571 VAL TYR TYR ASN MET PRO LEU PRO LYS ASP MET ILE ASP SEQRES 15 A 1571 GLU GLU GLY ASN PRO ILE MET GLN TYR PRO ARG ASN LYS SEQRES 16 A 1571 ILE ARG THR THR LYS TYR THR PRO LEU THR PHE LEU PRO SEQRES 17 A 1571 LYS ASN ILE LEU PHE GLN PHE HIS ASN PHE ALA ASN VAL SEQRES 18 A 1571 TYR PHE LEU VAL LEU ILE ILE LEU GLY ALA PHE GLN ILE SEQRES 19 A 1571 PHE GLY VAL THR ASN PRO GLY LEU SER ALA VAL PRO LEU SEQRES 20 A 1571 VAL VAL ILE VAL ILE ILE THR ALA ILE LYS ASP ALA ILE SEQRES 21 A 1571 GLU ASP SER ARG ARG THR VAL LEU ASP LEU GLU VAL ASN SEQRES 22 A 1571 ASN THR LYS THR HIS ILE LEU GLU GLY VAL GLU ASN GLU SEQRES 23 A 1571 ASN VAL SER THR ASP ASN ILE SER LEU TRP ARG ARG PHE SEQRES 24 A 1571 LYS LYS ALA ASN SER ARG LEU LEU PHE LYS PHE ILE GLN SEQRES 25 A 1571 TYR CYS LYS GLU HIS LEU THR GLU GLU GLY LYS LYS LYS SEQRES 26 A 1571 ARG MET GLN ARG LYS ARG HIS GLU LEU ARG VAL GLN LYS SEQRES 27 A 1571 THR VAL GLY THR SER GLY PRO ARG SER SER LEU ASP SER SEQRES 28 A 1571 ILE ASP SER TYR ARG VAL SER ALA ASP TYR GLY ARG PRO SEQRES 29 A 1571 SER LEU ASP TYR ASP ASN LEU GLU GLN GLY ALA GLY GLU SEQRES 30 A 1571 ALA ASN ILE VAL ASP ARG SER LEU PRO PRO ARG THR ASP SEQRES 31 A 1571 CYS LYS PHE ALA LYS ASN TYR TRP LYS GLY VAL LYS VAL SEQRES 32 A 1571 GLY ASP ILE VAL ARG ILE HIS ASN ASN ASP GLU ILE PRO SEQRES 33 A 1571 ALA ASP ILE ILE LEU LEU SER THR SER ASP THR ASP GLY SEQRES 34 A 1571 ALA CYS TYR VAL GLU THR LYS ASN LEU ASP GLY GLU THR SEQRES 35 A 1571 ASN LEU LYS VAL ARG GLN SER LEU LYS CYS THR ASN THR SEQRES 36 A 1571 ILE ARG THR SER LYS ASP ILE ALA ARG THR LYS PHE TRP SEQRES 37 A 1571 ILE GLU SER GLU GLY PRO HIS SER ASN LEU TYR THR TYR SEQRES 38 A 1571 GLN GLY ASN MET LYS TRP ARG ASN LEU ALA ASP GLY GLU SEQRES 39 A 1571 ILE ARG ASN GLU PRO ILE THR ILE ASN ASN VAL LEU LEU SEQRES 40 A 1571 ARG GLY CYS THR LEU ARG ASN THR LYS TRP ALA MET GLY SEQRES 41 A 1571 VAL VAL MET PHE THR GLY GLY ASP THR LYS ILE MET LEU SEQRES 42 A 1571 ASN SER GLY ILE THR PRO THR LYS LYS SER ARG ILE SER SEQRES 43 A 1571 ARG GLU LEU ASN PHE SER VAL VAL ILE ASN PHE VAL LEU SEQRES 44 A 1571 LEU PHE ILE LEU CYS PHE VAL SER GLY ILE ALA ASN GLY SEQRES 45 A 1571 VAL TYR TYR ASP LYS LYS GLY ARG SER ARG PHE SER TYR SEQRES 46 A 1571 GLU PHE GLY THR ILE ALA GLY SER ALA ALA THR ASN GLY SEQRES 47 A 1571 PHE VAL SER PHE TRP VAL ALA VAL ILE LEU TYR GLN SER SEQRES 48 A 1571 LEU VAL PRO ILE SER LEU TYR ILE SER VAL GLU ILE ILE SEQRES 49 A 1571 LYS THR ALA GLN ALA ALA PHE ILE TYR GLY ASP VAL LEU SEQRES 50 A 1571 LEU TYR ASN ALA LYS LEU ASP TYR PRO CYS THR PRO LYS SEQRES 51 A 1571 SER TRP ASN ILE SER ASP ASP LEU GLY GLN VAL GLU TYR SEQRES 52 A 1571 ILE PHE SER ASP LYS THR GLY THR LEU THR GLN ASN VAL SEQRES 53 A 1571 MET GLU PHE LYS LYS CYS THR ILE ASN GLY VAL SER TYR SEQRES 54 A 1571 GLY ARG ALA TYR THR GLU ALA LEU ALA GLY LEU ARG LYS SEQRES 55 A 1571 ARG GLN GLY ILE ASP VAL GLU THR GLU GLY ARG ARG GLU SEQRES 56 A 1571 LYS ALA GLU ILE ALA LYS ASP ARG ASP THR MET ILE ASP SEQRES 57 A 1571 GLU LEU ARG ALA LEU SER GLY ASN SER GLN PHE TYR PRO SEQRES 58 A 1571 GLU GLU VAL THR PHE VAL SER LYS GLU PHE VAL ARG ASP SEQRES 59 A 1571 LEU LYS GLY ALA SER GLY GLU VAL GLN GLN ARG CYS CYS SEQRES 60 A 1571 GLU HIS PHE MET LEU ALA LEU ALA LEU CYS HIS SER VAL SEQRES 61 A 1571 LEU VAL GLU ALA ASN PRO ASP ASN PRO LYS LYS LEU ASP SEQRES 62 A 1571 LEU LYS ALA GLN SER PRO ASP GLU ALA ALA LEU VAL ALA SEQRES 63 A 1571 THR ALA ARG ASP VAL GLY PHE SER PHE VAL GLY LYS THR SEQRES 64 A 1571 LYS LYS GLY LEU ILE ILE GLU MET GLN GLY ILE GLN LYS SEQRES 65 A 1571 GLU PHE GLU ILE LEU ASN ILE LEU GLU PHE ASN SER SER SEQRES 66 A 1571 ARG LYS ARG MET SER CYS ILE VAL LYS ILE PRO GLY LEU SEQRES 67 A 1571 ASN PRO GLY ASP GLU PRO ARG ALA LEU LEU ILE CYS LYS SEQRES 68 A 1571 GLY ALA ASP SER ILE ILE TYR SER ARG LEU SER ARG GLN SEQRES 69 A 1571 SER GLY SER ASN SER GLU ALA ILE LEU GLU LYS THR ALA SEQRES 70 A 1571 LEU HIS LEU GLU GLN TYR ALA THR GLU GLY LEU ARG THR SEQRES 71 A 1571 LEU CYS ILE ALA GLN ARG GLU LEU SER TRP SER GLU TYR SEQRES 72 A 1571 GLU LYS TRP ASN GLU LYS TYR ASP ILE ALA ALA ALA SER SEQRES 73 A 1571 LEU ALA ASN ARG GLU ASP GLU LEU GLU VAL VAL ALA ASP SEQRES 74 A 1571 SER ILE GLU ARG GLU LEU ILE LEU LEU GLY GLY THR ALA SEQRES 75 A 1571 ILE GLU ASP ARG LEU GLN ASP GLY VAL PRO ASP CYS ILE SEQRES 76 A 1571 GLU LEU LEU ALA GLU ALA GLY ILE LYS LEU TRP VAL LEU SEQRES 77 A 1571 THR GLY ASP LYS VAL GLU THR ALA ILE ASN ILE GLY PHE SEQRES 78 A 1571 SER CYS ASN LEU LEU ASN ASN GLU MET GLU LEU LEU VAL SEQRES 79 A 1571 ILE LYS THR THR GLY ASP ASP VAL LYS GLU PHE GLY SER SEQRES 80 A 1571 GLU PRO SER GLU ILE VAL ASP ALA LEU LEU SER LYS TYR SEQRES 81 A 1571 LEU LYS GLU TYR PHE ASN LEU THR GLY SER GLU GLU GLU SEQRES 82 A 1571 ILE PHE GLU ALA LYS LYS ASP HIS GLU PHE PRO LYS GLY SEQRES 83 A 1571 ASN TYR ALA ILE VAL ILE ASP GLY ASP ALA LEU LYS LEU SEQRES 84 A 1571 ALA LEU TYR GLY GLU ASP ILE ARG ARG LYS PHE LEU LEU SEQRES 85 A 1571 LEU CYS LYS ASN CYS ARG ALA VAL LEU CYS CYS ARG VAL SEQRES 86 A 1571 SER PRO SER GLN LYS ALA ALA VAL VAL LYS LEU VAL LYS SEQRES 87 A 1571 ASP SER LEU ASP VAL MET THR LEU ALA ILE GLY ASP GLY SEQRES 88 A 1571 SER ASN ASP VAL ALA MET ILE GLN SER ALA ASP VAL GLY SEQRES 89 A 1571 ILE GLY ILE ALA GLY GLU GLU GLY ARG GLN ALA VAL MET SEQRES 90 A 1571 CYS SER ASP TYR ALA ILE GLY GLN PHE ARG TYR LEU ALA SEQRES 91 A 1571 ARG LEU VAL LEU VAL HIS GLY ARG TRP SER TYR LYS ARG SEQRES 92 A 1571 LEU ALA GLU MET ILE PRO GLU PHE PHE TYR LYS ASN MET SEQRES 93 A 1571 ILE PHE ALA LEU ALA LEU PHE TRP TYR GLY ILE TYR ASN SEQRES 94 A 1571 ASP PHE ASP GLY SER TYR LEU TYR GLU TYR THR TYR MET SEQRES 95 A 1571 MET PHE TYR ASN LEU ALA PHE THR SER LEU PRO VAL ILE SEQRES 96 A 1571 PHE LEU GLY ILE LEU ASP GLN ASP VAL ASN ASP THR ILE SEQRES 97 A 1571 SER LEU VAL VAL PRO GLN LEU TYR ARG VAL GLY ILE LEU SEQRES 98 A 1571 ARG LYS GLU TRP ASN GLN ARG LYS PHE LEU TRP TYR MET SEQRES 99 A 1571 LEU ASP GLY LEU TYR GLN SER ILE ILE CYS PHE PHE PHE SEQRES 100 A 1571 PRO TYR LEU VAL TYR HIS LYS ASN MET ILE VAL THR SER SEQRES 101 A 1571 ASN GLY LEU GLY LEU ASP HIS ARG TYR PHE VAL GLY VAL SEQRES 102 A 1571 TYR VAL THR THR ILE ALA VAL ILE SER CYS ASN THR TYR SEQRES 103 A 1571 VAL LEU LEU HIS GLN TYR ARG TRP ASP TRP PHE SER GLY SEQRES 104 A 1571 LEU PHE ILE ALA LEU SER CYS LEU VAL VAL PHE ALA TRP SEQRES 105 A 1571 THR GLY ILE TRP SER SER ALA ILE ALA SER ARG GLU PHE SEQRES 106 A 1571 PHE LYS ALA ALA ALA ARG ILE TYR GLY ALA PRO SER PHE SEQRES 107 A 1571 TRP ALA VAL PHE PHE VAL ALA VAL LEU PHE CYS LEU LEU SEQRES 108 A 1571 PRO ARG PHE THR TYR ASP SER PHE GLN LYS PHE PHE TYR SEQRES 109 A 1571 PRO THR ASP VAL GLU ILE VAL ARG GLU MET TRP GLN HIS SEQRES 110 A 1571 GLY HIS PHE ASP HIS TYR PRO PRO GLY TYR ASP PRO THR SEQRES 111 A 1571 ASP PRO ASN ARG PRO LYS VAL THR LYS ALA GLY GLN HIS SEQRES 112 A 1571 GLY GLU LYS ILE ILE GLU GLY ILE ALA LEU SER ASP ASN SEQRES 113 A 1571 LEU GLY GLY SER ASN TYR SER ARG ASP SER VAL VAL THR SEQRES 114 A 1571 GLU GLU ILE PRO MET THR PHE MET HIS GLY GLU ASP GLY SEQRES 115 A 1571 SER PRO SER GLY TYR GLN LYS GLN GLU THR TRP MET THR SEQRES 116 A 1571 SER PRO LYS GLU THR GLN ASP LEU LEU GLN SER PRO GLN SEQRES 117 A 1571 PHE GLN GLN ALA GLN THR PHE GLY ARG GLY PRO SER THR SEQRES 118 A 1571 ASN VAL ARG SER SER LEU ASP ARG THR ARG GLU GLN MET SEQRES 119 A 1571 ILE ALA THR ASN GLN LEU ASP ASN ARG TYR SER VAL GLU SEQRES 120 A 1571 ARG ALA ARG THR SER LEU ASP LEU PRO GLY VAL THR ASN SEQRES 121 A 1571 ALA ALA SER LEU ILE GLY THR GLN GLN ASN ASN SEQRES 1 B 414 MET VAL ASN PHE ASP LEU GLY GLN VAL GLY GLU VAL PHE SEQRES 2 B 414 ARG ARG LYS ASP LYS GLY ALA ILE VAL SER GLY ASP ASN SEQRES 3 B 414 PRO GLU GLU GLU GLU ASP VAL ASP ALA SER GLU PHE GLU SEQRES 4 B 414 GLU ASP GLU VAL LYS PRO VAL ARG THR LYS ASN ARG ARG SEQRES 5 B 414 PRO LYS GLU ASP ALA PHE THR GLN GLN ARG LEU ALA ALA SEQRES 6 B 414 ILE ASN PRO VAL LEU THR PRO ARG THR VAL LEU PRO LEU SEQRES 7 B 414 TYR LEU LEU ILE ALA VAL VAL PHE VAL ILE VAL GLY GLY SEQRES 8 B 414 CYS ILE LEU ALA GLN ASN SER LYS VAL ASP GLU VAL THR SEQRES 9 B 414 ILE TYR TYR GLN ASP CYS MET THR ASN ALA THR SER SER SEQRES 10 B 414 TRP SER ASP ILE PRO SER GLU HIS TRP GLN PHE VAL PHE SEQRES 11 B 414 HIS LYS TYR LYS THR TYR ASN THR ALA PRO GLN TRP ARG SEQRES 12 B 414 PHE VAL ASP ASP GLU SER ASP ASP PHE THR LYS GLN ARG SEQRES 13 B 414 GLY THR CYS GLN ILE ARG PHE THR THR PRO SER ASP MET SEQRES 14 B 414 LYS ASN ASN VAL TYR LEU ASN TYR VAL LEU GLU LYS PHE SEQRES 15 B 414 ALA ALA ASN HIS ARG ARG TYR VAL LEU SER PHE SER GLU SEQRES 16 B 414 ASP GLN ILE ARG GLY GLU ASP ALA SER TYR GLU THR VAL SEQRES 17 B 414 HIS ASP ALA THR GLY ILE ASN CYS LYS PRO LEU SER LYS SEQRES 18 B 414 ASN ALA ASP GLY LYS ILE TYR TYR PRO CYS GLY LEU ILE SEQRES 19 B 414 ALA ASN SER MET PHE ASN ASP THR PHE PRO LEU GLN LEU SEQRES 20 B 414 THR ASN VAL GLY ASP THR SER ASN ASN TYR SER LEU THR SEQRES 21 B 414 ASN LYS GLY ILE ASN TRP GLU SER ASP LYS LYS ARG TYR SEQRES 22 B 414 LYS LYS THR LYS TYR ASN TYR THR GLN ILE ALA PRO PRO SEQRES 23 B 414 PRO TYR TRP GLU LYS MET TYR PRO ASP GLY TYR ASN GLU SEQRES 24 B 414 THR ASN ILE PRO ASP ILE GLN ASP TRP GLU GLU PHE GLN SEQRES 25 B 414 ASN TRP MET ARG PRO GLY ALA PHE ASP LYS ILE THR LYS SEQRES 26 B 414 LEU ILE ARG ILE ASN LYS ASN ASP THR LEU PRO ALA GLY SEQRES 27 B 414 GLU TYR GLN LEU ASP ILE GLY LEU HIS TRP PRO VAL LEU SEQRES 28 B 414 GLU PHE ASN GLY LYS LYS GLY ILE TYR LEU THR HIS GLY SEQRES 29 B 414 SER HIS LEU GLY GLY ARG ASN PRO PHE LEU GLY ILE VAL SEQRES 30 B 414 TYR LEU ILE GLY GLY CYS ILE CYS ALA ALA MET ALA LEU SEQRES 31 B 414 ILE LEU LEU THR PHE TRP LEU PHE GLY GLY ARG LYS ILE SEQRES 32 B 414 ALA ASP ALA SER SER LEU SER TRP ASN MET LYS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MG A1601 1 HET BEF A1602 4 HET 6PL A1603 52 HET 6PL A1604 52 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MG MAGNESIUM ION HETNAM BEF BERYLLIUM TRIFLUORIDE ION HETNAM 6PL (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7- HETNAM 2 6PL [(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4- HETNAM 3 6PL PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN 6PL 1-PALMITOYL-2-STEAROYL-SN-GLYCERO-3-PHOSPHOCHOLINE FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 4 MG MG 2+ FORMUL 5 BEF BE F3 1- FORMUL 6 6PL 2(C42 H85 N O8 P 1+) HELIX 1 AA1 THR A 205 HIS A 216 1 12 HELIX 2 AA2 ALA A 219 ALA A 231 1 13 HELIX 3 AA3 ALA A 244 ASN A 273 1 30 HELIX 4 AA4 THR A 458 ARG A 464 1 7 HELIX 5 AA5 THR A 501 ASN A 503 5 3 HELIX 6 AA6 THR A 525 ASP A 528 5 4 HELIX 7 AA7 THR A 529 ASN A 534 1 6 HELIX 8 AA8 SER A 543 TYR A 575 1 33 HELIX 9 AA9 PHE A 599 TYR A 609 1 11 HELIX 10 AB1 GLN A 610 VAL A 613 5 4 HELIX 11 AB2 SER A 616 GLY A 634 1 19 HELIX 12 AB3 ASP A 656 GLN A 660 5 5 HELIX 13 AB4 VAL A 708 ARG A 723 1 16 HELIX 14 AB5 GLU A 761 LEU A 774 1 14 HELIX 15 AB6 SER A 798 GLY A 812 1 15 HELIX 16 AB7 ALA A 873 TYR A 878 1 6 HELIX 17 AB8 ILE A 892 THR A 905 1 14 HELIX 18 AB9 SER A 919 ASP A 931 1 13 HELIX 19 AC1 ASP A 931 SER A 936 1 6 HELIX 20 AC2 ASP A 942 GLU A 952 1 11 HELIX 21 AC3 GLY A 970 ALA A 981 1 12 HELIX 22 AC4 LYS A 992 CYS A 1003 1 12 HELIX 23 AC5 ALA A 1035 THR A 1048 1 14 HELIX 24 AC6 GLU A 1056 ASP A 1060 5 5 HELIX 25 AC7 GLY A 1083 ASN A 1096 1 14 HELIX 26 AC8 SER A 1106 LEU A 1121 1 16 HELIX 27 AC9 ASP A 1134 ALA A 1141 1 8 HELIX 28 AD1 ARG A 1153 CYS A 1158 1 6 HELIX 29 AD2 ARG A 1167 LEU A 1174 1 8 HELIX 30 AD3 VAL A 1175 LEU A 1200 1 26 HELIX 31 AD4 LEU A 1200 TYR A 1205 1 6 HELIX 32 AD5 GLU A 1218 TYR A 1225 1 8 HELIX 33 AD6 THR A 1230 ASP A 1241 1 12 HELIX 34 AD7 THR A 1247 VAL A 1252 1 6 HELIX 35 AD8 PRO A 1253 LEU A 1255 5 3 HELIX 36 AD9 TYR A 1256 LEU A 1261 1 6 HELIX 37 AE1 ASN A 1266 HIS A 1293 1 28 HELIX 38 AE2 HIS A 1307 HIS A 1330 1 24 HELIX 39 AE3 ASP A 1335 LEU A 1347 1 13 HELIX 40 AE4 LEU A 1347 SER A 1357 1 11 HELIX 41 AE5 SER A 1358 ARG A 1363 5 6 HELIX 42 AE6 LYS A 1367 TYR A 1373 1 7 HELIX 43 AE7 SER A 1377 TYR A 1404 1 28 HELIX 44 AE8 THR A 1406 HIS A 1417 1 12 HELIX 45 AE9 THR B 71 SER B 98 1 28 HELIX 46 AF1 SER B 194 ARG B 199 1 6 HELIX 47 AF2 SER B 204 VAL B 208 5 5 HELIX 48 AF3 CYS B 231 SER B 237 1 7 HELIX 49 AF4 TRP B 266 ARG B 272 5 7 HELIX 50 AF5 TRP B 308 MET B 315 1 8 HELIX 51 AF6 VAL B 350 ASN B 354 5 5 HELIX 52 AF7 PRO B 372 ALA B 386 1 15 HELIX 53 AF8 ALA B 386 PHE B 395 1 10 SHEET 1 AA1 4 THR A 169 TYR A 172 0 SHEET 2 AA1 4 PHE A 467 SER A 471 -1 O ILE A 469 N VAL A 170 SHEET 3 AA1 4 GLY A 483 ARG A 488 -1 O ASN A 484 N GLU A 470 SHEET 4 AA1 4 ILE A 495 ILE A 500 -1 O ILE A 500 N GLY A 483 SHEET 1 AA2 2 THR A 277 LEU A 280 0 SHEET 2 AA2 2 PHE A 393 ASN A 396 -1 O ASN A 396 N THR A 277 SHEET 1 AA3 4 ILE A 406 HIS A 410 0 SHEET 2 AA3 4 TRP A 517 PHE A 524 -1 O ALA A 518 N ILE A 409 SHEET 3 AA3 4 ASP A 418 THR A 424 -1 N LEU A 422 O MET A 519 SHEET 4 AA3 4 VAL A 505 LEU A 506 -1 O LEU A 506 N ILE A 419 SHEET 1 AA4 2 VAL A 433 GLU A 434 0 SHEET 2 AA4 2 LEU A 444 LYS A 445 -1 O LYS A 445 N VAL A 433 SHEET 1 AA5 5 TYR A 663 SER A 666 0 SHEET 2 AA5 5 LYS A 984 LEU A 988 1 O LEU A 988 N SER A 666 SHEET 3 AA5 5 VAL A1100 CYS A1102 1 O CYS A1102 N VAL A 987 SHEET 4 AA5 5 TYR A1068 ILE A1072 1 N ILE A1070 O LEU A1101 SHEET 5 AA5 5 GLU A1011 VAL A1014 1 N LEU A1013 O ALA A1069 SHEET 1 AA6 9 VAL A 687 TYR A 689 0 SHEET 2 AA6 9 THR A 673 ILE A 684 -1 N CYS A 682 O TYR A 689 SHEET 3 AA6 9 ILE A 956 LEU A 967 -1 O GLU A 964 N GLU A 678 SHEET 4 AA6 9 ARG A 909 LEU A 918 -1 N GLN A 915 O ILE A 956 SHEET 5 AA6 9 ALA A 866 GLY A 872 -1 N CYS A 870 O ALA A 914 SHEET 6 AA6 9 ARG A 848 VAL A 853 -1 N MET A 849 O LYS A 871 SHEET 7 AA6 9 ILE A 830 LEU A 840 -1 N LEU A 840 O SER A 850 SHEET 8 AA6 9 GLY A 822 MET A 827 -1 N LEU A 823 O PHE A 834 SHEET 9 AA6 9 PHE A 813 LYS A 818 -1 N SER A 814 O GLU A 826 SHEET 1 AA7 2 LEU A 781 ALA A 784 0 SHEET 2 AA7 2 LEU A 792 LYS A 795 -1 O LYS A 795 N LEU A 781 SHEET 1 AA8 3 ILE A1128 GLY A1129 0 SHEET 2 AA8 3 ILE A1145 ILE A1147 1 O ILE A1145 N GLY A1129 SHEET 3 AA8 3 TYR A1161 ILE A1163 1 O TYR A1161 N GLY A1146 SHEET 1 AA9 5 TRP B 126 VAL B 129 0 SHEET 2 AA9 5 GLU B 102 TYR B 106 -1 N THR B 104 O GLN B 127 SHEET 3 AA9 5 LYS B 357 THR B 362 -1 O LEU B 361 N VAL B 103 SHEET 4 AA9 5 VAL B 173 LEU B 179 -1 N TYR B 174 O THR B 362 SHEET 5 AA9 5 ILE B 323 ASN B 330 -1 O ARG B 328 N LEU B 175 SHEET 1 AB1 6 SER B 119 ASP B 120 0 SHEET 2 AB1 6 GLN B 141 VAL B 145 -1 O TRP B 142 N SER B 119 SHEET 3 AB1 6 THR B 158 THR B 164 -1 O GLN B 160 N ARG B 143 SHEET 4 AB1 6 GLU B 339 GLY B 345 -1 O LEU B 342 N ILE B 161 SHEET 5 AB1 6 GLN B 246 ASN B 249 -1 N THR B 248 O GLN B 341 SHEET 6 AB1 6 TYR B 257 SER B 258 -1 O TYR B 257 N LEU B 247 SHEET 1 AB2 2 ILE B 227 TYR B 228 0 SHEET 2 AB2 2 ILE B 283 ALA B 284 1 O ALA B 284 N ILE B 227 SSBOND 1 CYS B 110 CYS B 159 1555 1555 2.03 SSBOND 2 CYS B 216 CYS B 231 1555 1555 2.03 LINK ND2 ASN B 240 C1 NAG C 1 1555 1555 1.42 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK OD1 ASP A 667 MG MG A1601 1555 1555 2.13 LINK OD2 ASP A 667 MG MG A1601 1555 1555 2.24 CISPEP 1 PHE A 1063 PRO A 1064 0 0.05 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000