HEADER OXIDOREDUCTASE 27-JAN-21 7E0C TITLE STRUCTURE OF L-GLUTAMATE OXIDASE R305E MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-GLUTAMATE OXIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.4.3.11; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. X-119-6; SOURCE 3 ORGANISM_TAXID: 196112; SOURCE 4 GENE: LGOX; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMAL-C2 KEYWDS L-GLUTAMIC ACID OXIDASE, L-AMINO ACID OXIDASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.ITO,S.MATSUO,K.INAGAKI,K.IMADA REVDAT 3 29-NOV-23 7E0C 1 REMARK REVDAT 2 21-APR-21 7E0C 1 JRNL REVDAT 1 07-APR-21 7E0C 0 JRNL AUTH Y.YANO,S.MATSUO,N.ITO,T.TAMURA,H.KUSAKABE,K.INAGAKI,K.IMADA JRNL TITL A NEW L-ARGININE OXIDASE ENGINEERED FROM L-GLUTAMATE JRNL TITL 2 OXIDASE. JRNL REF PROTEIN SCI. V. 30 1044 2021 JRNL REFN ESSN 1469-896X JRNL PMID 33764624 JRNL DOI 10.1002/PRO.4070 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.15.2_3472: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 66.3110 - 5.2992 1.00 2910 173 0.2218 0.2630 REMARK 3 2 5.2992 - 4.2063 1.00 2741 143 0.1649 0.2068 REMARK 3 3 4.2063 - 3.6747 1.00 2718 144 0.1659 0.1922 REMARK 3 4 3.6747 - 3.3387 1.00 2705 127 0.1751 0.2045 REMARK 3 5 3.3387 - 3.0994 1.00 2657 142 0.1984 0.2627 REMARK 3 6 3.0994 - 2.9167 1.00 2691 130 0.2124 0.3199 REMARK 3 7 2.9167 - 2.7706 1.00 2645 153 0.2154 0.2877 REMARK 3 8 2.7706 - 2.6500 1.00 2638 136 0.2163 0.2966 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4917 REMARK 3 ANGLE : 0.860 6711 REMARK 3 CHIRALITY : 0.051 704 REMARK 3 PLANARITY : 0.006 879 REMARK 3 DIHEDRAL : 6.998 3959 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7E0C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1300020530. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22897 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 84.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.00 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2E1M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% (W/V) PEG 8000, 0.1M TRIS-HCL REMARK 280 PH7.0, 75MM MGCL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.21033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 112.42067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.31550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 140.52583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.10517 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.21033 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 112.42067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 140.52583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 84.31550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.10517 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -61.98500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 107.36117 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 28.10517 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1069 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 15 REMARK 465 ASN A 16 REMARK 465 GLY A 363 REMARK 465 ARG A 364 REMARK 465 ASP A 365 REMARK 465 GLY A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 GLY A 369 REMARK 465 GLU A 370 REMARK 465 LEU A 371 REMARK 465 GLY A 387 REMARK 465 GLU A 388 REMARK 465 PRO A 389 REMARK 465 TYR A 390 REMARK 465 GLN A 471 REMARK 465 TRP A 472 REMARK 465 GLY A 473 REMARK 465 GLU A 474 REMARK 465 ASP A 475 REMARK 465 ASP A 476 REMARK 465 ALA A 477 REMARK 465 GLU A 478 REMARK 465 ALA A 479 REMARK 465 ALA A 480 REMARK 465 LEU A 481 REMARK 465 ALA A 482 REMARK 465 LEU A 483 REMARK 465 PRO A 484 REMARK 465 GLN A 485 REMARK 465 SER A 486 REMARK 465 VAL A 487 REMARK 465 ARG A 488 REMARK 465 ASN A 489 REMARK 465 LEU A 490 REMARK 465 PRO A 491 REMARK 465 THR A 492 REMARK 465 GLY A 493 REMARK 465 LEU A 494 REMARK 465 LEU A 495 REMARK 465 GLY A 496 REMARK 465 ALA A 497 REMARK 465 HIS A 498 REMARK 465 PRO A 499 REMARK 465 SER A 500 REMARK 465 VAL A 501 REMARK 465 ASP A 502 REMARK 465 GLU A 503 REMARK 465 SER A 504 REMARK 465 ARG A 505 REMARK 465 ILE A 506 REMARK 465 GLY A 507 REMARK 465 GLU A 508 REMARK 465 GLU A 509 REMARK 465 GLN A 510 REMARK 465 VAL A 511 REMARK 465 GLU A 512 REMARK 465 TYR A 513 REMARK 465 TYR A 514 REMARK 465 ARG A 515 REMARK 465 ASN A 516 REMARK 465 SER A 517 REMARK 465 GLU A 518 REMARK 465 LEU A 519 REMARK 465 ARG A 520 REMARK 465 GLY A 521 REMARK 465 PRO A 672 REMARK 465 VAL A 673 REMARK 465 GLY A 674 REMARK 465 ASP A 675 REMARK 465 THR A 676 REMARK 465 GLY A 677 REMARK 465 VAL A 678 REMARK 465 THR A 679 REMARK 465 ALA A 680 REMARK 465 ALA A 681 REMARK 465 ALA A 682 REMARK 465 GLY A 683 REMARK 465 ARG A 684 REMARK 465 ARG A 685 REMARK 465 GLY A 686 REMARK 465 ALA A 687 REMARK 465 ALA A 688 REMARK 465 ALA A 689 REMARK 465 ALA A 690 REMARK 465 THR A 691 REMARK 465 GLU A 692 REMARK 465 PRO A 693 REMARK 465 MET A 694 REMARK 465 ARG A 695 REMARK 465 GLU A 696 REMARK 465 GLU A 697 REMARK 465 ALA A 698 REMARK 465 LEU A 699 REMARK 465 THR A 700 REMARK 465 SER A 701 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 268 O HOH A 1001 1.91 REMARK 500 OE2 GLU A 119 O HOH A 1002 1.93 REMARK 500 O VAL A 620 O HOH A 1003 1.99 REMARK 500 O HOH A 1009 O HOH A 1035 2.03 REMARK 500 O PRO A 108 O HOH A 1004 2.14 REMARK 500 OG1 THR A 372 O PRO A 377 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1075 O HOH A 1085 12565 1.77 REMARK 500 OD1 ASN A 199 NH1 ARG A 424 12565 2.08 REMARK 500 O HOH A 1009 O HOH A 1072 12565 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 49 -67.46 -93.83 REMARK 500 PRO A 54 126.65 -36.72 REMARK 500 ALA A 66 40.60 -108.16 REMARK 500 GLN A 154 37.55 -98.70 REMARK 500 LYS A 171 -155.07 -103.45 REMARK 500 GLN A 249 -179.49 -67.66 REMARK 500 GLU A 300 -72.73 -76.50 REMARK 500 ASN A 301 -153.35 -107.78 REMARK 500 ASP A 319 95.58 -47.69 REMARK 500 ARG A 541 -98.31 51.23 REMARK 500 SER A 565 -127.45 56.62 REMARK 500 ALA A 614 -51.56 -132.99 REMARK 500 HIS A 624 -10.31 73.47 REMARK 500 PHE A 629 6.68 -154.64 REMARK 500 LYS A 650 57.16 -108.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2E1M RELATED DB: PDB REMARK 900 WILD-TYPE DBREF 7E0C A 16 701 UNP Q8L3C7 Q8L3C7_9ACTN 16 701 SEQADV 7E0C MET A 15 UNP Q8L3C7 EXPRESSION TAG SEQADV 7E0C GLU A 305 UNP Q8L3C7 ARG 305 ENGINEERED MUTATION SEQRES 1 A 687 MET ASN GLU MET THR TYR GLU GLN LEU ALA ARG GLU LEU SEQRES 2 A 687 LEU LEU VAL GLY PRO ALA PRO THR ASN GLU ASP LEU LYS SEQRES 3 A 687 LEU ARG TYR LEU ASP VAL LEU ILE ASP ASN GLY LEU ASN SEQRES 4 A 687 PRO PRO GLY PRO PRO LYS ARG ILE LEU ILE VAL GLY ALA SEQRES 5 A 687 GLY ILE ALA GLY LEU VAL ALA GLY ASP LEU LEU THR ARG SEQRES 6 A 687 ALA GLY HIS ASP VAL THR ILE LEU GLU ALA ASN ALA ASN SEQRES 7 A 687 ARG VAL GLY GLY ARG ILE LYS THR PHE HIS ALA LYS LYS SEQRES 8 A 687 GLY GLU PRO SER PRO PHE ALA ASP PRO ALA GLN TYR ALA SEQRES 9 A 687 GLU ALA GLY ALA MET ARG LEU PRO SER PHE HIS PRO LEU SEQRES 10 A 687 THR LEU ALA LEU ILE ASP LYS LEU GLY LEU LYS ARG ARG SEQRES 11 A 687 LEU PHE PHE ASN VAL ASP ILE ASP PRO GLN THR GLY ASN SEQRES 12 A 687 GLN ASP ALA PRO VAL PRO PRO VAL PHE TYR LYS SER PHE SEQRES 13 A 687 LYS ASP GLY LYS THR TRP THR ASN GLY ALA PRO SER PRO SEQRES 14 A 687 GLU PHE LYS GLU PRO ASP LYS ARG ASN HIS THR TRP ILE SEQRES 15 A 687 ARG THR ASN ARG GLU GLN VAL ARG ARG ALA GLN TYR ALA SEQRES 16 A 687 THR ASP PRO SER SER ILE ASN GLU GLY PHE HIS LEU THR SEQRES 17 A 687 GLY CYS GLU THR ARG LEU THR VAL SER ASP MET VAL ASN SEQRES 18 A 687 GLN ALA LEU GLU PRO VAL ARG ASP TYR TYR SER VAL LYS SEQRES 19 A 687 GLN ASP ASP GLY THR ARG VAL ASN LYS PRO PHE LYS GLU SEQRES 20 A 687 TRP LEU ALA GLY TRP ALA ASP VAL VAL ARG ASP PHE ASP SEQRES 21 A 687 GLY TYR SER MET GLY ARG PHE LEU ARG GLU TYR ALA GLU SEQRES 22 A 687 PHE SER ASP GLU ALA VAL GLU ALA ILE GLY THR ILE GLU SEQRES 23 A 687 ASN MET THR SER GLU LEU HIS LEU ALA PHE PHE HIS SER SEQRES 24 A 687 PHE LEU GLY ARG SER ASP ILE ASP PRO ARG ALA THR TYR SEQRES 25 A 687 TRP GLU ILE GLU GLY GLY SER ARG MET LEU PRO GLU THR SEQRES 26 A 687 LEU ALA LYS ASP LEU ARG ASP GLN ILE VAL MET GLY GLN SEQRES 27 A 687 ARG MET VAL ARG LEU GLU TYR TYR ASP PRO GLY ARG ASP SEQRES 28 A 687 GLY HIS HIS GLY GLU LEU THR GLY PRO GLY GLY PRO ALA SEQRES 29 A 687 VAL ALA ILE GLN THR VAL PRO GLU GLY GLU PRO TYR ALA SEQRES 30 A 687 ALA THR GLN THR TRP THR GLY ASP LEU ALA ILE VAL THR SEQRES 31 A 687 ILE PRO PHE SER SER LEU ARG PHE VAL LYS VAL THR PRO SEQRES 32 A 687 PRO PHE SER TYR LYS LYS ARG ARG ALA VAL ILE GLU THR SEQRES 33 A 687 HIS TYR ASP GLN ALA THR LYS VAL LEU LEU GLU PHE SER SEQRES 34 A 687 ARG ARG TRP TRP GLU PHE THR GLU ALA ASP TRP LYS ARG SEQRES 35 A 687 GLU LEU ASP ALA ILE ALA PRO GLY LEU TYR ASP TYR TYR SEQRES 36 A 687 GLN GLN TRP GLY GLU ASP ASP ALA GLU ALA ALA LEU ALA SEQRES 37 A 687 LEU PRO GLN SER VAL ARG ASN LEU PRO THR GLY LEU LEU SEQRES 38 A 687 GLY ALA HIS PRO SER VAL ASP GLU SER ARG ILE GLY GLU SEQRES 39 A 687 GLU GLN VAL GLU TYR TYR ARG ASN SER GLU LEU ARG GLY SEQRES 40 A 687 GLY VAL ARG PRO ALA THR ASN ALA TYR GLY GLY GLY SER SEQRES 41 A 687 THR THR ASP ASN PRO ASN ARG PHE MET TYR TYR PRO SER SEQRES 42 A 687 HIS PRO VAL PRO GLY THR GLN GLY GLY VAL VAL LEU ALA SEQRES 43 A 687 ALA TYR SER TRP SER ASP ASP ALA ALA ARG TRP ASP SER SEQRES 44 A 687 PHE ASP ASP ALA GLU ARG TYR GLY TYR ALA LEU GLU ASN SEQRES 45 A 687 LEU GLN SER VAL HIS GLY ARG ARG ILE GLU VAL PHE TYR SEQRES 46 A 687 THR GLY ALA GLY GLN THR GLN SER TRP LEU ARG ASP PRO SEQRES 47 A 687 TYR ALA CYS GLY GLU ALA ALA VAL TYR THR PRO HIS GLN SEQRES 48 A 687 MET THR ALA PHE HIS LEU ASP VAL VAL ARG PRO GLU GLY SEQRES 49 A 687 PRO VAL TYR PHE ALA GLY GLU HIS VAL SER LEU LYS HIS SEQRES 50 A 687 ALA TRP ILE GLU GLY ALA VAL GLU THR ALA VAL ARG ALA SEQRES 51 A 687 ALA ILE ALA VAL ASN GLU ALA PRO VAL GLY ASP THR GLY SEQRES 52 A 687 VAL THR ALA ALA ALA GLY ARG ARG GLY ALA ALA ALA ALA SEQRES 53 A 687 THR GLU PRO MET ARG GLU GLU ALA LEU THR SER HET FAD A 900 53 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 HOH *87(H2 O) HELIX 1 AA1 GLU A 17 LEU A 29 1 13 HELIX 2 AA2 ASP A 38 ASP A 49 1 12 HELIX 3 AA3 GLY A 67 ALA A 80 1 14 HELIX 4 AA4 HIS A 129 LEU A 139 1 11 HELIX 5 AA5 ARG A 205 ASP A 211 1 7 HELIX 6 AA6 PRO A 212 GLU A 217 1 6 HELIX 7 AA7 GLY A 218 HIS A 220 5 3 HELIX 8 AA8 THR A 222 LEU A 228 5 7 HELIX 9 AA9 THR A 229 ASP A 243 1 15 HELIX 10 AB1 PRO A 258 ASP A 274 1 17 HELIX 11 AB2 SER A 277 TYR A 285 1 9 HELIX 12 AB3 SER A 289 GLU A 300 1 12 HELIX 13 AB4 ALA A 309 GLY A 316 1 8 HELIX 14 AB5 ARG A 334 ASP A 343 1 10 HELIX 15 AB6 PRO A 406 ARG A 411 1 6 HELIX 16 AB7 SER A 420 THR A 430 1 11 HELIX 17 AB8 ARG A 445 PHE A 449 5 5 HELIX 18 AB9 THR A 450 ALA A 460 1 11 HELIX 19 AC1 GLY A 464 GLN A 470 1 7 HELIX 20 AC2 SER A 565 SER A 573 1 9 HELIX 21 AC3 ASP A 575 GLY A 592 1 18 HELIX 22 AC4 ARG A 593 VAL A 597 5 5 HELIX 23 AC5 HIS A 624 ARG A 635 1 12 HELIX 24 AC6 GLY A 644 SER A 648 5 5 HELIX 25 AC7 TRP A 653 ALA A 671 1 19 SHEET 1 AA1 5 ILE A 348 MET A 350 0 SHEET 2 AA1 5 ASP A 83 GLU A 88 1 N ILE A 86 O VAL A 349 SHEET 3 AA1 5 ARG A 60 VAL A 64 1 N ILE A 63 O THR A 85 SHEET 4 AA1 5 LEU A 400 VAL A 403 1 O ILE A 402 N VAL A 64 SHEET 5 AA1 5 VAL A 640 PHE A 642 1 O TYR A 641 N ALA A 401 SHEET 1 AA2 2 THR A 100 PHE A 101 0 SHEET 2 AA2 2 ALA A 118 GLU A 119 -1 O ALA A 118 N PHE A 101 SHEET 1 AA3 3 LEU A 125 PRO A 126 0 SHEET 2 AA3 3 TYR A 326 ILE A 329 -1 O TRP A 327 N LEU A 125 SHEET 3 AA3 3 ARG A 143 PHE A 146 -1 N PHE A 146 O TYR A 326 SHEET 1 AA4 2 ILE A 151 ASP A 152 0 SHEET 2 AA4 2 ASP A 189 LYS A 190 -1 O ASP A 189 N ASP A 152 SHEET 1 AA5 2 PHE A 166 LYS A 168 0 SHEET 2 AA5 2 THR A 175 THR A 177 -1 O TRP A 176 N TYR A 167 SHEET 1 AA6 4 GLU A 201 ARG A 204 0 SHEET 2 AA6 4 TRP A 195 THR A 198 -1 N ILE A 196 O VAL A 203 SHEET 3 AA6 4 GLY A 533 THR A 536 1 O THR A 535 N ARG A 197 SHEET 4 AA6 4 PHE A 542 TYR A 544 -1 O MET A 543 N SER A 534 SHEET 1 AA7 2 SER A 246 LYS A 248 0 SHEET 2 AA7 2 ARG A 254 ASN A 256 -1 O VAL A 255 N VAL A 247 SHEET 1 AA8 4 GLN A 394 GLY A 398 0 SHEET 2 AA8 4 VAL A 379 PRO A 385 -1 N THR A 383 O GLN A 394 SHEET 3 AA8 4 GLN A 352 TYR A 359 -1 N GLU A 358 O ALA A 380 SHEET 4 AA8 4 LYS A 414 THR A 416 1 O LYS A 414 N LEU A 357 SHEET 1 AA9 2 HIS A 431 TYR A 432 0 SHEET 2 AA9 2 ALA A 619 VAL A 620 -1 O VAL A 620 N HIS A 431 SHEET 1 AB1 3 GLY A 556 TRP A 564 0 SHEET 2 AB1 3 ALA A 435 PHE A 442 -1 N PHE A 442 O GLY A 556 SHEET 3 AB1 3 TYR A 599 SER A 607 -1 O GLN A 604 N LEU A 439 CISPEP 1 ALA A 33 PRO A 34 0 0.74 CISPEP 2 ASP A 251 GLY A 252 0 6.19 CISPEP 3 THR A 416 PRO A 417 0 -4.33 SITE 1 AC1 37 GLY A 65 GLY A 67 ILE A 68 ALA A 69 SITE 2 AC1 37 GLU A 88 ALA A 89 GLY A 95 GLY A 96 SITE 3 AC1 37 ARG A 97 ILE A 98 GLY A 121 ALA A 122 SITE 4 AC1 37 MET A 123 ARG A 124 ARG A 317 GLN A 352 SITE 5 AC1 37 ARG A 353 MET A 354 ILE A 405 SER A 409 SITE 6 AC1 37 TRP A 608 TYR A 613 GLU A 617 GLY A 644 SITE 7 AC1 37 GLU A 645 ALA A 652 TRP A 653 ILE A 654 SITE 8 AC1 37 ALA A 657 HOH A1005 HOH A1007 HOH A1021 SITE 9 AC1 37 HOH A1026 HOH A1030 HOH A1044 HOH A1063 SITE 10 AC1 37 HOH A1068 CRYST1 123.970 123.970 168.631 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008066 0.004657 0.000000 0.00000 SCALE2 0.000000 0.009314 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005930 0.00000