HEADER CELL CYCLE 08-FEB-21 7E34 TITLE CRYSTAL STRUCTURE OF SUN1-SPEEDY A-CDK2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIN-DEPENDENT KINASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CELL DIVISION PROTEIN KINASE 2,P33 PROTEIN KINASE; COMPND 5 EC: 2.7.11.22; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SPEEDY PROTEIN A; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: RAPID INDUCER OF G2/M PROGRESSION IN OOCYTES A,HSPY/RINGO A, COMPND 11 SPEEDY-1,SPY1; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: SUN DOMAIN-CONTAINING PROTEIN 1; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: PROTEIN UNC-84 HOMOLOG A,SAD1/UNC-84 PROTEIN-LIKE 1; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDK2, CDKN2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETDUET; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: SPDYA, SPDY1, SPY1; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 GENE: SUN1, KIAA0810, UNC84A; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 25 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 26 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 27 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1 KEYWDS TELOMERE, MEIOSIS, KINASE, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHEN,C.HUANG,J.WU,M.LEI REVDAT 3 29-NOV-23 7E34 1 REMARK REVDAT 2 10-NOV-21 7E34 1 JRNL REVDAT 1 14-APR-21 7E34 0 JRNL AUTH Y.CHEN,Y.WANG,J.CHEN,W.ZUO,Y.FAN,S.HUANG,Y.LIU,G.CHEN,Q.LI, JRNL AUTH 2 J.LI,J.WU,Q.BIAN,C.HUANG,M.LEI JRNL TITL THE SUN1-SPDYA INTERACTION PLAYS AN ESSENTIAL ROLE IN JRNL TITL 2 MEIOSIS PROPHASE I. JRNL REF NAT COMMUN V. 12 3176 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 34039995 JRNL DOI 10.1038/S41467-021-23550-W REMARK 2 REMARK 2 RESOLUTION. 3.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 9095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 472 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 23 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.19 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.27 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 53.31 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 396 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2518 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 375 REMARK 3 BIN R VALUE (WORKING SET) : 0.2427 REMARK 3 BIN FREE R VALUE : 0.4215 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 21 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3777 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.70760 REMARK 3 B22 (A**2) : 3.47160 REMARK 3 B33 (A**2) : -4.17910 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.520 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.627 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.857 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.791 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3883 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5263 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1346 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 641 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3883 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 494 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4380 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.94 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.89 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.11 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1 - A|298 } REMARK 3 ORIGIN FOR THE GROUP (A): 8.5820 -31.0873 11.9362 REMARK 3 T TENSOR REMARK 3 T11: -0.3098 T22: 0.2417 REMARK 3 T33: -0.3535 T12: -0.1858 REMARK 3 T13: 0.0833 T23: -0.3040 REMARK 3 L TENSOR REMARK 3 L11: 3.9628 L22: 2.2955 REMARK 3 L33: 5.5282 L12: 0.4757 REMARK 3 L13: -0.2563 L23: 0.7668 REMARK 3 S TENSOR REMARK 3 S11: 0.1863 S12: -0.4662 S13: 0.2362 REMARK 3 S21: -0.1302 S22: 0.3488 S23: -0.0587 REMARK 3 S31: -0.1310 S32: 1.0388 S33: -0.5351 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|61 - B|201 } REMARK 3 ORIGIN FOR THE GROUP (A): -11.2659 -14.7787 -7.1272 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: -0.2574 REMARK 3 T33: -0.0912 T12: -0.0538 REMARK 3 T13: 0.3040 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 3.6216 L22: 6.4786 REMARK 3 L33: 7.2550 L12: -1.2916 REMARK 3 L13: 0.2615 L23: -0.1739 REMARK 3 S TENSOR REMARK 3 S11: 0.0932 S12: -0.0578 S13: 0.1948 REMARK 3 S21: -0.1630 S22: 0.2943 S23: 0.2984 REMARK 3 S31: -0.6059 S32: -0.1150 S33: -0.3875 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|137 - C|154 } REMARK 3 ORIGIN FOR THE GROUP (A): -4.1890 -22.1432 -20.5759 REMARK 3 T TENSOR REMARK 3 T11: 0.1109 T22: -0.0364 REMARK 3 T33: -0.1276 T12: -0.1055 REMARK 3 T13: -0.0873 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.7099 L22: 1.8936 REMARK 3 L33: 2.2129 L12: 1.8872 REMARK 3 L13: -2.4592 L23: 1.4313 REMARK 3 S TENSOR REMARK 3 S11: 0.0118 S12: 0.1017 S13: 0.0374 REMARK 3 S21: -0.0139 S22: 0.0047 S23: -0.0122 REMARK 3 S31: -0.0292 S32: 0.0173 S33: -0.0165 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MOLECULAR REPLACEMENT REMARK 4 REMARK 4 7E34 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1300020663. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91905 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9795 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.190 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.57300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5UQ2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M AMMONIUM CITRATE TRIBASIC, REMARK 280 PH7.0, 12% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.91450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.91450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.67000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 91.76250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.67000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 91.76250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.91450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.67000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 91.76250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.91450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.67000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 91.76250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -173.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 202 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS B 203 REMARK 465 SER B 204 REMARK 465 GLY B 205 REMARK 465 ALA B 206 REMARK 465 VAL B 207 REMARK 465 ARG B 208 REMARK 465 ASN B 209 REMARK 465 TYR B 210 REMARK 465 ASN B 211 REMARK 465 ARG B 212 REMARK 465 ASP B 213 REMARK 465 ASP C 126 REMARK 465 ALA C 127 REMARK 465 VAL C 128 REMARK 465 THR C 129 REMARK 465 ARG C 130 REMARK 465 ARG C 131 REMARK 465 PRO C 132 REMARK 465 PRO C 133 REMARK 465 VAL C 134 REMARK 465 LEU C 135 REMARK 465 ASP C 136 REMARK 465 GLY C 156 REMARK 465 ASP C 157 REMARK 465 LEU C 158 REMARK 465 LYS C 159 REMARK 465 GLY C 160 REMARK 465 GLY C 161 REMARK 465 ASN C 162 REMARK 465 LYS C 163 REMARK 465 ALA C 164 REMARK 465 ALA C 165 REMARK 465 ILE C 166 REMARK 465 GLN C 167 REMARK 465 GLY C 168 REMARK 465 ASN C 169 REMARK 465 GLY C 170 REMARK 465 ASP C 171 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 -68.12 62.82 REMARK 500 ILE A 10 -77.43 -113.74 REMARK 500 ARG A 22 -157.62 -102.19 REMARK 500 ASN A 23 -159.64 -152.96 REMARK 500 LEU A 25 68.85 -102.90 REMARK 500 THR A 26 -169.91 60.70 REMARK 500 GLU A 28 97.37 -69.75 REMARK 500 ARG A 126 11.13 52.55 REMARK 500 ASP A 127 52.25 -153.52 REMARK 500 ASP A 145 82.42 51.52 REMARK 500 VAL A 156 19.11 44.59 REMARK 500 VAL A 163 -54.07 -120.03 REMARK 500 TYR A 179 74.71 62.39 REMARK 500 SER A 181 -158.87 -153.09 REMARK 500 THR A 182 -41.20 -26.47 REMARK 500 THR A 218 -61.28 -98.36 REMARK 500 GLU A 224 31.98 -73.64 REMARK 500 VAL A 225 -39.63 -132.38 REMARK 500 ASP A 235 54.55 -109.58 REMARK 500 PHE A 286 31.32 -93.36 REMARK 500 ASP A 288 46.28 -109.90 REMARK 500 SER B 200 -40.17 -135.27 REMARK 500 TRP C 139 79.08 -115.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 92 SG REMARK 620 2 CYS B 92 SG 0.0 REMARK 620 N 1 DBREF 7E34 A 2 298 UNP P24941 CDK2_HUMAN 2 298 DBREF 7E34 B 61 213 UNP Q5MJ70 SPDYA_HUMAN 61 213 DBREF 7E34 C 126 171 UNP O94901 SUN1_HUMAN 126 171 SEQADV 7E34 SER A 1 UNP P24941 EXPRESSION TAG SEQRES 1 A 298 SER GLU ASN PHE GLN LYS VAL GLU LYS ILE GLY GLU GLY SEQRES 2 A 298 THR TYR GLY VAL VAL TYR LYS ALA ARG ASN LYS LEU THR SEQRES 3 A 298 GLY GLU VAL VAL ALA LEU LYS LYS ILE ARG LEU ASP THR SEQRES 4 A 298 GLU THR GLU GLY VAL PRO SER THR ALA ILE ARG GLU ILE SEQRES 5 A 298 SER LEU LEU LYS GLU LEU ASN HIS PRO ASN ILE VAL LYS SEQRES 6 A 298 LEU LEU ASP VAL ILE HIS THR GLU ASN LYS LEU TYR LEU SEQRES 7 A 298 VAL PHE GLU PHE LEU HIS GLN ASP LEU LYS LYS PHE MET SEQRES 8 A 298 ASP ALA SER ALA LEU THR GLY ILE PRO LEU PRO LEU ILE SEQRES 9 A 298 LYS SER TYR LEU PHE GLN LEU LEU GLN GLY LEU ALA PHE SEQRES 10 A 298 CYS HIS SER HIS ARG VAL LEU HIS ARG ASP LEU LYS PRO SEQRES 11 A 298 GLN ASN LEU LEU ILE ASN THR GLU GLY ALA ILE LYS LEU SEQRES 12 A 298 ALA ASP PHE GLY LEU ALA ARG ALA PHE GLY VAL PRO VAL SEQRES 13 A 298 ARG THR TYR THR HIS GLU VAL VAL THR LEU TRP TYR ARG SEQRES 14 A 298 ALA PRO GLU ILE LEU LEU GLY CYS LYS TYR TYR SER THR SEQRES 15 A 298 ALA VAL ASP ILE TRP SER LEU GLY CYS ILE PHE ALA GLU SEQRES 16 A 298 MET VAL THR ARG ARG ALA LEU PHE PRO GLY ASP SER GLU SEQRES 17 A 298 ILE ASP GLN LEU PHE ARG ILE PHE ARG THR LEU GLY THR SEQRES 18 A 298 PRO ASP GLU VAL VAL TRP PRO GLY VAL THR SER MET PRO SEQRES 19 A 298 ASP TYR LYS PRO SER PHE PRO LYS TRP ALA ARG GLN ASP SEQRES 20 A 298 PHE SER LYS VAL VAL PRO PRO LEU ASP GLU ASP GLY ARG SEQRES 21 A 298 SER LEU LEU SER GLN MET LEU HIS TYR ASP PRO ASN LYS SEQRES 22 A 298 ARG ILE SER ALA LYS ALA ALA LEU ALA HIS PRO PHE PHE SEQRES 23 A 298 GLN ASP VAL THR LYS PRO VAL PRO HIS LEU ARG LEU SEQRES 1 B 153 GLY PRO CYS LEU VAL ILE GLN ARG GLN ASP MET THR ALA SEQRES 2 B 153 PHE PHE LYS LEU PHE ASP ASP ASP LEU ILE GLN ASP PHE SEQRES 3 B 153 LEU TRP MET ASP CYS CYS CYS LYS ILE ALA ASP LYS TYR SEQRES 4 B 153 LEU LEU ALA MET THR PHE VAL TYR PHE LYS ARG ALA LYS SEQRES 5 B 153 PHE THR ILE SER GLU HIS THR ARG ILE ASN PHE PHE ILE SEQRES 6 B 153 ALA LEU TYR LEU ALA ASN THR VAL GLU GLU ASP GLU GLU SEQRES 7 B 153 GLU THR LYS TYR GLU ILE PHE PRO TRP ALA LEU GLY LYS SEQRES 8 B 153 ASN TRP ARG LYS LEU PHE PRO ASN PHE LEU LYS LEU ARG SEQRES 9 B 153 ASP GLN LEU TRP ASP ARG ILE ASP TYR ARG ALA ILE VAL SEQRES 10 B 153 SER ARG ARG CYS CYS GLU GLU VAL MET ALA ILE ALA PRO SEQRES 11 B 153 THR HIS TYR ILE TRP GLN ARG GLU ARG SER VAL HIS HIS SEQRES 12 B 153 SER GLY ALA VAL ARG ASN TYR ASN ARG ASP SEQRES 1 C 46 ASP ALA VAL THR ARG ARG PRO PRO VAL LEU ASP GLU SER SEQRES 2 C 46 TRP ILE ARG GLU GLN THR THR VAL ASP HIS PHE TRP GLY SEQRES 3 C 46 LEU ASP ASP ASP GLY ASP LEU LYS GLY GLY ASN LYS ALA SEQRES 4 C 46 ALA ILE GLN GLY ASN GLY ASP HET GOL A 301 6 HET ZN B 301 1 HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL C3 H8 O3 FORMUL 5 ZN ZN 2+ FORMUL 6 HOH *31(H2 O) HELIX 1 AA1 PRO A 45 LYS A 56 1 12 HELIX 2 AA2 LEU A 87 SER A 94 1 8 HELIX 3 AA3 PRO A 100 HIS A 121 1 22 HELIX 4 AA4 LYS A 129 GLN A 131 5 3 HELIX 5 AA5 THR A 165 ARG A 169 5 5 HELIX 6 AA6 ALA A 170 LEU A 175 1 6 HELIX 7 AA7 THR A 182 ARG A 199 1 18 HELIX 8 AA8 SER A 207 LEU A 219 1 13 HELIX 9 AA9 ASP A 247 VAL A 252 1 6 HELIX 10 AB1 ASP A 256 LEU A 267 1 12 HELIX 11 AB2 SER A 276 ALA A 282 1 7 HELIX 12 AB3 HIS A 283 ASP A 288 5 6 HELIX 13 AB4 ARG B 68 LYS B 76 1 9 HELIX 14 AB5 LEU B 77 ASP B 79 5 3 HELIX 15 AB6 ASP B 80 ASP B 90 1 11 HELIX 16 AB7 ASP B 97 LYS B 112 1 16 HELIX 17 AB8 THR B 114 HIS B 118 5 5 HELIX 18 AB9 THR B 119 GLU B 135 1 17 HELIX 19 AC1 GLU B 139 GLU B 143 5 5 HELIX 20 AC2 ILE B 144 GLY B 150 1 7 HELIX 21 AC3 ASN B 152 ILE B 171 1 20 HELIX 22 AC4 SER B 178 ALA B 187 1 10 HELIX 23 AC5 HIS B 192 ARG B 197 5 6 SHEET 1 AA1 5 LYS A 6 GLU A 12 0 SHEET 2 AA1 5 GLY A 16 ALA A 21 -1 O LYS A 20 N VAL A 7 SHEET 3 AA1 5 VAL A 30 ILE A 35 -1 O LYS A 34 N VAL A 17 SHEET 4 AA1 5 LEU A 76 GLU A 81 -1 O LEU A 78 N LYS A 33 SHEET 5 AA1 5 LEU A 66 HIS A 71 -1 N ILE A 70 O TYR A 77 SHEET 1 AA2 3 GLN A 85 ASP A 86 0 SHEET 2 AA2 3 LEU A 133 ILE A 135 -1 O ILE A 135 N GLN A 85 SHEET 3 AA2 3 ILE A 141 LEU A 143 -1 O LYS A 142 N LEU A 134 SHEET 1 AA3 2 VAL A 123 LEU A 124 0 SHEET 2 AA3 2 ARG A 150 ALA A 151 -1 O ARG A 150 N LEU A 124 SHEET 1 AA4 2 LEU B 64 GLN B 67 0 SHEET 2 AA4 2 GLN C 143 VAL C 146 -1 O THR C 144 N ILE B 66 LINK SG CYS B 92 ZN ZN B 301 1555 1555 2.35 LINK SG CYS B 92 ZN ZN B 301 1555 4555 2.73 CRYST1 59.340 183.525 103.829 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016852 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005449 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009631 0.00000