HEADER VIRUS 07-MAR-21 7EAI TITLE ECHOVIRUS3 EMPTY COMPACTED PARTICLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: CAPSID PROTEIN VP0; COMPND 6 CHAIN: B; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: CAPSID PROTEIN VP3; COMPND 9 CHAIN: C SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ECHOVIRUS E3; SOURCE 3 ORGANISM_TAXID: 47516; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: ECHOVIRUS E3; SOURCE 6 ORGANISM_TAXID: 47516; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: ECHOVIRUS E3; SOURCE 9 ORGANISM_TAXID: 47516 KEYWDS ECHOVIRUS3, EMPTY COMPACTED PARTICLE, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR R.FENG REVDAT 1 14-JUL-21 7EAI 0 JRNL AUTH R.FENG,L.WANG,D.SHI,B.ZHENG,L.ZHANG,H.HOU,D.XIA,L.CUI, JRNL AUTH 2 X.WANG,S.XU,K.WANG,L.ZHU JRNL TITL STRUCTURAL BASIS FOR NEUTRALIZATION OF AN ANICTERIC JRNL TITL 2 HEPATITIS ASSOCIATED ECHOVIRUS BY A POTENT NEUTRALIZING JRNL TITL 3 ANTIBODY. JRNL REF CELL DISCOV V. 7 35 2021 JRNL REFN ESSN 2056-5968 JRNL PMID 34035235 JRNL DOI 10.1038/S41421-021-00264-3 REMARK 2 REMARK 2 RESOLUTION. 3.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.800 REMARK 3 NUMBER OF PARTICLES : 2330 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7EAI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1300021062. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ECHOVIRUS E3 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI ARCTICA REMARK 245 DETECTOR TYPE : GATAN K2 QUANTUM (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : DARK FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.670820 -0.688191 0.276393 159.68063 REMARK 350 BIOMT2 2 0.162460 0.500000 0.850651 -110.57535 REMARK 350 BIOMT3 2 -0.723607 -0.525731 0.447214 388.35779 REMARK 350 BIOMT1 3 0.138197 -0.951057 -0.276393 450.23405 REMARK 350 BIOMT2 3 -0.425325 -0.309017 0.850651 190.43554 REMARK 350 BIOMT3 3 -0.894427 0.000000 -0.447214 504.62359 REMARK 350 BIOMT1 4 0.138197 -0.425325 -0.894427 470.12532 REMARK 350 BIOMT2 4 -0.951057 -0.309017 0.000000 487.04585 REMARK 350 BIOMT3 4 -0.276393 0.850651 -0.447214 188.12201 REMARK 350 BIOMT1 5 0.670820 0.162460 -0.723607 191.86537 REMARK 350 BIOMT2 5 -0.688191 0.500000 -0.525731 369.35021 REMARK 350 BIOMT3 5 0.276393 0.850651 0.447214 -123.75252 REMARK 350 BIOMT1 6 -0.309017 -0.951057 0.000000 487.04585 REMARK 350 BIOMT2 6 -0.951057 0.309017 0.000000 353.85952 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 431.00000 REMARK 350 BIOMT1 7 -0.361803 -0.262866 -0.894427 542.86523 REMARK 350 BIOMT2 7 -0.587785 0.809017 0.000000 167.82456 REMARK 350 BIOMT3 7 0.723607 0.525731 -0.447214 42.64220 REMARK 350 BIOMT1 8 0.361803 0.587785 -0.723607 166.80091 REMARK 350 BIOMT2 8 -0.262866 0.809017 0.525731 -15.49069 REMARK 350 BIOMT3 8 0.894427 0.000000 0.447214 -73.62359 REMARK 350 BIOMT1 9 0.861803 0.425325 0.276393 -121.43899 REMARK 350 BIOMT2 9 -0.425325 0.309017 0.850651 57.24922 REMARK 350 BIOMT3 9 0.276393 -0.850651 0.447214 242.87799 REMARK 350 BIOMT1 10 0.447214 -0.525731 0.723607 76.48326 REMARK 350 BIOMT2 10 -0.850651 0.000000 0.525731 285.52020 REMARK 350 BIOMT3 10 -0.276393 -0.850651 -0.447214 554.75252 REMARK 350 BIOMT1 11 -0.638197 0.262866 -0.723607 452.32111 REMARK 350 BIOMT2 11 0.262866 -0.809017 -0.525731 446.49069 REMARK 350 BIOMT3 11 -0.723607 -0.525731 0.447214 388.35779 REMARK 350 BIOMT1 12 0.138197 0.951057 -0.276393 40.32869 REMARK 350 BIOMT2 12 0.425325 -0.309017 -0.850651 373.75079 REMARK 350 BIOMT3 12 -0.894427 0.000000 -0.447214 504.62359 REMARK 350 BIOMT1 13 0.447214 0.525731 0.723607 -150.10685 REMARK 350 BIOMT2 13 0.850651 0.000000 -0.525731 145.47981 REMARK 350 BIOMT3 13 -0.276393 0.850651 -0.447214 188.12201 REMARK 350 BIOMT1 14 -0.138197 -0.425325 0.894427 144.18994 REMARK 350 BIOMT2 14 0.951057 -0.309017 0.000000 77.14048 REMARK 350 BIOMT3 14 0.276393 0.850651 0.447214 -123.75252 REMARK 350 BIOMT1 15 -0.809017 -0.587785 0.000000 516.51089 REMARK 350 BIOMT2 15 0.587785 -0.809017 0.000000 263.17544 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 16 -0.052786 0.688191 0.723607 -77.36694 REMARK 350 BIOMT2 16 0.688191 -0.500000 0.525731 61.64979 REMARK 350 BIOMT3 16 0.723607 0.525731 -0.447214 42.64221 REMARK 350 BIOMT1 17 -0.447214 0.000000 0.894427 119.12548 REMARK 350 BIOMT2 17 0.000000 -1.000000 0.000000 431.00001 REMARK 350 BIOMT3 17 0.894427 0.000000 0.447214 -73.62359 REMARK 350 BIOMT1 18 -0.947214 -0.162460 0.276393 395.07190 REMARK 350 BIOMT2 18 -0.162460 -0.500000 -0.850651 541.57535 REMARK 350 BIOMT3 18 0.276393 -0.850651 0.447214 242.87798 REMARK 350 BIOMT1 19 -0.861803 0.425325 -0.276393 369.12375 REMARK 350 BIOMT2 19 0.425325 0.309017 -0.850651 240.56446 REMARK 350 BIOMT3 19 -0.276393 -0.850651 -0.447214 554.75251 REMARK 350 BIOMT1 20 -0.309017 0.951057 0.000000 77.14049 REMARK 350 BIOMT2 20 0.951057 0.309017 0.000000 -56.04584 REMARK 350 BIOMT3 20 0.000000 0.000000 -1.000000 431.00000 REMARK 350 BIOMT1 21 0.947214 -0.162460 -0.276393 105.94830 REMARK 350 BIOMT2 21 0.162460 -0.500000 0.850651 104.92466 REMARK 350 BIOMT3 21 -0.276393 -0.850651 -0.447214 554.75252 REMARK 350 BIOMT1 22 0.809017 -0.587785 0.000000 167.82456 REMARK 350 BIOMT2 22 -0.587785 -0.809017 0.000000 516.51089 REMARK 350 BIOMT3 22 0.000000 0.000000 -1.000000 431.00000 REMARK 350 BIOMT1 23 0.447214 -0.850651 -0.276393 362.00346 REMARK 350 BIOMT2 23 -0.525731 0.000000 -0.850651 512.11031 REMARK 350 BIOMT3 23 0.723607 0.525731 -0.447214 42.64220 REMARK 350 BIOMT1 24 0.361803 -0.587785 -0.723607 420.13636 REMARK 350 BIOMT2 24 0.262866 0.809017 -0.525731 97.80436 REMARK 350 BIOMT3 24 0.894427 0.000000 0.447214 -73.62359 REMARK 350 BIOMT1 25 0.670820 -0.162460 -0.723607 261.88557 REMARK 350 BIOMT2 25 0.688191 0.500000 0.525731 -153.85021 REMARK 350 BIOMT3 25 0.276393 -0.850651 0.447214 242.87798 REMARK 350 BIOMT1 26 -0.138197 -0.951057 0.276393 390.67132 REMARK 350 BIOMT2 26 0.425325 -0.309017 -0.850651 373.75079 REMARK 350 BIOMT3 26 0.894427 0.000000 0.447214 -73.62360 REMARK 350 BIOMT1 27 -0.447214 -0.525731 -0.723607 581.10686 REMARK 350 BIOMT2 27 0.850651 0.000000 -0.525731 145.47981 REMARK 350 BIOMT3 27 0.276393 -0.850651 0.447214 242.87798 REMARK 350 BIOMT1 28 0.138197 0.425325 -0.894427 286.81007 REMARK 350 BIOMT2 28 0.951057 -0.309017 0.000000 77.14048 REMARK 350 BIOMT3 28 -0.276393 -0.850651 -0.447214 554.75252 REMARK 350 BIOMT1 29 0.809017 0.587785 0.000000 -85.51088 REMARK 350 BIOMT2 29 0.587785 -0.809017 0.000000 263.17544 REMARK 350 BIOMT3 29 0.000000 0.000000 -1.000000 431.00000 REMARK 350 BIOMT1 30 0.638197 -0.262866 0.723607 -21.32110 REMARK 350 BIOMT2 30 0.262866 -0.809017 -0.525731 446.49069 REMARK 350 BIOMT3 30 0.723607 0.525731 -0.447214 42.64220 REMARK 350 BIOMT1 31 -0.447214 0.525731 -0.723607 354.51674 REMARK 350 BIOMT2 31 -0.850651 0.000000 0.525731 285.52020 REMARK 350 BIOMT3 31 0.276393 0.850651 0.447214 -123.75252 REMARK 350 BIOMT1 32 0.309017 0.951057 0.000000 -56.04584 REMARK 350 BIOMT2 32 -0.951057 0.309017 0.000000 353.85952 REMARK 350 BIOMT3 32 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 33 0.361803 0.262866 0.894427 -111.86522 REMARK 350 BIOMT2 33 -0.587785 0.809017 0.000000 167.82456 REMARK 350 BIOMT3 33 -0.723607 -0.525731 0.447214 388.35779 REMARK 350 BIOMT1 34 -0.361803 -0.587785 0.723607 264.19910 REMARK 350 BIOMT2 34 -0.262866 0.809017 0.525731 -15.49069 REMARK 350 BIOMT3 34 -0.894427 0.000000 -0.447214 504.62359 REMARK 350 BIOMT1 35 -0.861803 -0.425325 -0.276393 552.43900 REMARK 350 BIOMT2 35 -0.425325 0.309017 0.850651 57.24922 REMARK 350 BIOMT3 35 -0.276393 0.850651 -0.447214 188.12201 REMARK 350 BIOMT1 36 -0.361803 0.587785 0.723607 10.86365 REMARK 350 BIOMT2 36 0.262866 0.809017 -0.525731 97.80437 REMARK 350 BIOMT3 36 -0.894427 0.000000 -0.447214 504.62359 REMARK 350 BIOMT1 37 -0.670820 0.162460 0.723607 169.11444 REMARK 350 BIOMT2 37 0.688191 0.500000 0.525731 -153.85021 REMARK 350 BIOMT3 37 -0.276393 0.850651 -0.447214 188.12201 REMARK 350 BIOMT1 38 -0.947214 0.162460 0.276393 325.05170 REMARK 350 BIOMT2 38 0.162460 -0.500000 0.850651 104.92466 REMARK 350 BIOMT3 38 0.276393 0.850651 0.447214 -123.75252 REMARK 350 BIOMT1 39 -0.809017 0.587785 0.000000 263.17545 REMARK 350 BIOMT2 39 -0.587785 -0.809017 0.000000 516.51089 REMARK 350 BIOMT3 39 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 40 -0.447214 0.850651 0.276393 68.99655 REMARK 350 BIOMT2 40 -0.525731 0.000000 -0.850651 512.11031 REMARK 350 BIOMT3 40 -0.723607 -0.525731 0.447214 388.35779 REMARK 350 BIOMT1 41 0.947214 0.162460 -0.276393 35.92811 REMARK 350 BIOMT2 41 -0.162460 -0.500000 -0.850651 541.57535 REMARK 350 BIOMT3 41 -0.276393 0.850651 -0.447214 188.12201 REMARK 350 BIOMT1 42 0.861803 -0.425325 0.276393 61.87626 REMARK 350 BIOMT2 42 0.425325 0.309017 -0.850651 240.56446 REMARK 350 BIOMT3 42 0.276393 0.850651 0.447214 -123.75252 REMARK 350 BIOMT1 43 0.309017 -0.951057 0.000000 353.85952 REMARK 350 BIOMT2 43 0.951057 0.309017 0.000000 -56.04584 REMARK 350 BIOMT3 43 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 44 0.052786 -0.688191 -0.723607 508.36695 REMARK 350 BIOMT2 44 0.688191 -0.500000 0.525731 61.64979 REMARK 350 BIOMT3 44 -0.723607 -0.525731 0.447214 388.35779 REMARK 350 BIOMT1 45 0.447214 0.000000 -0.894427 311.87453 REMARK 350 BIOMT2 45 0.000000 -1.000000 0.000000 431.00001 REMARK 350 BIOMT3 45 -0.894427 0.000000 -0.447214 504.62359 REMARK 350 BIOMT1 46 -0.447214 -0.850651 0.276393 435.62705 REMARK 350 BIOMT2 46 0.525731 0.000000 0.850651 -81.11030 REMARK 350 BIOMT3 46 -0.723607 0.525731 0.447214 161.76768 REMARK 350 BIOMT1 47 -0.638197 -0.262866 -0.723607 565.61617 REMARK 350 BIOMT2 47 -0.262866 -0.809017 0.525731 333.19564 REMARK 350 BIOMT3 47 -0.723607 0.525731 0.447214 161.76768 REMARK 350 BIOMT1 48 0.052786 0.688191 -0.723607 211.75665 REMARK 350 BIOMT2 48 -0.688191 -0.500000 -0.525731 584.85022 REMARK 350 BIOMT3 48 -0.723607 0.525731 0.447214 161.76768 REMARK 350 BIOMT1 49 0.670820 0.688191 0.276393 -136.92968 REMARK 350 BIOMT2 49 -0.162460 0.500000 -0.850651 326.07535 REMARK 350 BIOMT3 49 -0.723607 0.525731 0.447214 161.76768 REMARK 350 BIOMT1 50 0.361803 -0.262866 0.894427 1.42984 REMARK 350 BIOMT2 50 0.587785 0.809017 0.000000 -85.51089 REMARK 350 BIOMT3 50 -0.723607 0.525731 0.447214 161.76768 REMARK 350 BIOMT1 51 -0.361803 0.262866 -0.894427 429.57017 REMARK 350 BIOMT2 51 0.587785 0.809017 0.000000 -85.51089 REMARK 350 BIOMT3 51 0.723607 -0.525731 -0.447214 269.23232 REMARK 350 BIOMT1 52 0.447214 0.850651 -0.276393 -4.62704 REMARK 350 BIOMT2 52 0.525731 0.000000 0.850651 -81.11030 REMARK 350 BIOMT3 52 0.723607 -0.525731 -0.447214 269.23232 REMARK 350 BIOMT1 53 0.638197 0.262866 0.723607 -134.61616 REMARK 350 BIOMT2 53 -0.262866 -0.809017 0.525731 333.19564 REMARK 350 BIOMT3 53 0.723607 -0.525731 -0.447214 269.23232 REMARK 350 BIOMT1 54 -0.052786 -0.688191 0.723607 219.24336 REMARK 350 BIOMT2 54 -0.688191 -0.500000 -0.525731 584.85022 REMARK 350 BIOMT3 54 0.723607 -0.525731 -0.447214 269.23231 REMARK 350 BIOMT1 55 -0.670820 -0.688191 -0.276393 567.92969 REMARK 350 BIOMT2 55 -0.162460 0.500000 -0.850651 326.07535 REMARK 350 BIOMT3 55 0.723607 -0.525731 -0.447214 269.23231 REMARK 350 BIOMT1 56 -0.138197 0.425325 0.894427 -39.12531 REMARK 350 BIOMT2 56 -0.951057 -0.309017 0.000000 487.04585 REMARK 350 BIOMT3 56 0.276393 -0.850651 0.447214 242.87798 REMARK 350 BIOMT1 57 -0.670820 -0.162460 0.723607 239.13464 REMARK 350 BIOMT2 57 -0.688191 0.500000 -0.525731 369.35021 REMARK 350 BIOMT3 57 -0.276393 -0.850651 -0.447214 554.75251 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 431.00001 REMARK 350 BIOMT2 58 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 58 0.000000 0.000000 -1.000000 431.00000 REMARK 350 BIOMT1 59 -0.670820 0.688191 -0.276393 271.31938 REMARK 350 BIOMT2 59 0.162460 0.500000 0.850651 -110.57535 REMARK 350 BIOMT3 59 0.723607 0.525731 -0.447214 42.64221 REMARK 350 BIOMT1 60 -0.138197 0.951057 0.276393 -19.23405 REMARK 350 BIOMT2 60 -0.425325 -0.309017 0.850651 190.43554 REMARK 350 BIOMT3 60 0.894427 0.000000 0.447214 -73.62359 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ASP A 2 REMARK 465 VAL A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 6 REMARK 465 ILE A 7 REMARK 465 ASP A 8 REMARK 465 ARG A 9 REMARK 465 ALA A 10 REMARK 465 VAL A 11 REMARK 465 ALA A 12 REMARK 465 ARG A 13 REMARK 465 VAL A 14 REMARK 465 ALA A 15 REMARK 465 ASP A 16 REMARK 465 THR A 17 REMARK 465 MET A 18 REMARK 465 PRO A 19 REMARK 465 THR A 20 REMARK 465 GLY A 21 REMARK 465 PRO A 22 REMARK 465 ARG A 23 REMARK 465 ASN A 24 REMARK 465 THR A 25 REMARK 465 GLU A 26 REMARK 465 SER A 27 REMARK 465 VAL A 28 REMARK 465 PRO A 29 REMARK 465 ALA A 30 REMARK 465 LEU A 31 REMARK 465 THR A 32 REMARK 465 ALA A 33 REMARK 465 VAL A 34 REMARK 465 GLU A 35 REMARK 465 THR A 36 REMARK 465 GLY A 37 REMARK 465 HIS A 38 REMARK 465 THR A 39 REMARK 465 SER A 40 REMARK 465 GLN A 41 REMARK 465 VAL A 42 REMARK 465 VAL A 43 REMARK 465 PRO A 44 REMARK 465 GLY A 45 REMARK 465 ASP A 46 REMARK 465 THR A 47 REMARK 465 MET A 48 REMARK 465 GLN A 49 REMARK 465 THR A 50 REMARK 465 ARG A 51 REMARK 465 HIS A 52 REMARK 465 VAL A 53 REMARK 465 LYS A 54 REMARK 465 THR A 290 REMARK 465 ASN A 291 REMARK 465 HIS A 292 REMARK 465 GLY B 11 REMARK 465 ALA B 12 REMARK 465 HIS B 13 REMARK 465 GLU B 14 REMARK 465 THR B 15 REMARK 465 SER B 16 REMARK 465 LEU B 17 REMARK 465 THR B 18 REMARK 465 ALA B 19 REMARK 465 SER B 20 REMARK 465 GLY B 21 REMARK 465 ASN B 22 REMARK 465 SER B 23 REMARK 465 GLN B 48 REMARK 465 ASP B 49 REMARK 465 PRO B 50 REMARK 465 SER B 51 REMARK 465 LYS B 52 REMARK 465 PHE B 53 REMARK 465 THR B 54 REMARK 465 GLU B 55 REMARK 465 PRO B 56 REMARK 465 MET B 57 REMARK 465 LYS B 58 REMARK 465 ASP B 59 REMARK 465 VAL B 60 REMARK 465 MET B 61 REMARK 465 ILE B 62 REMARK 465 LYS B 63 REMARK 465 SER B 64 REMARK 465 LEU B 65 REMARK 465 PRO B 66 REMARK 465 ALA B 67 REMARK 465 LEU B 68 REMARK 465 ASN B 69 REMARK 465 SER B 70 REMARK 465 PRO B 71 REMARK 465 THR B 72 REMARK 465 VAL B 73 REMARK 465 GLU B 74 REMARK 465 GLU B 75 REMARK 465 CYS B 76 REMARK 465 GLY B 77 REMARK 465 PHE B 78 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 GLN B 232 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SD MET A 181 C18 SPH A 301 1.45 REMARK 500 CD2 LEU C 132 SG CYS C 192 1.50 REMARK 500 O PRO C 54 OD1 ASN C 57 1.90 REMARK 500 CG2 VAL C 53 CE1 PHE C 95 2.00 REMARK 500 CG1 VAL C 53 CE1 PHE C 95 2.06 REMARK 500 OG SER C 51 OG1 THR C 98 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 56 50.62 -91.97 REMARK 500 CYS A 69 52.36 -93.15 REMARK 500 THR A 85 75.87 46.87 REMARK 500 GLU A 108 49.15 -87.87 REMARK 500 THR A 131 -169.74 -119.66 REMARK 500 GLN A 135 -54.54 74.35 REMARK 500 THR A 158 42.45 37.12 REMARK 500 ASN A 211 47.88 -87.23 REMARK 500 VAL A 249 78.00 54.24 REMARK 500 LYS B 34 34.58 -99.32 REMARK 500 THR B 94 -70.37 -95.01 REMARK 500 GLN B 95 160.90 178.37 REMARK 500 TYR B 104 51.04 -93.31 REMARK 500 THR B 227 -154.43 -114.68 REMARK 500 THR B 237 43.09 -108.16 REMARK 500 ASN B 250 50.63 -92.72 REMARK 500 GLN C 77 -78.99 -111.40 REMARK 500 LYS C 96 -37.82 -157.56 REMARK 500 ALA C 139 -79.85 -123.26 REMARK 500 PRO C 229 44.10 -85.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-31044 RELATED DB: EMDB REMARK 900 ECHOVIRUS3 EMPTY COMPACTED PARTICLE DBREF1 7EAI A 1 292 UNP A0A6M4MJE3_9ENTO DBREF2 7EAI A A0A6M4MJE3 569 860 DBREF1 7EAI B 2 330 UNP A0A6M4MJE3_9ENTO DBREF2 7EAI B A0A6M4MJE3 2 330 DBREF1 7EAI C 1 238 UNP A0A6M4MJE3_9ENTO DBREF2 7EAI C A0A6M4MJE3 331 568 SEQADV 7EAI ASN C 224 UNP A0A6M4MJE MET 554 CONFLICT SEQRES 1 A 292 GLY ASP VAL GLU GLU ALA ILE ASP ARG ALA VAL ALA ARG SEQRES 2 A 292 VAL ALA ASP THR MET PRO THR GLY PRO ARG ASN THR GLU SEQRES 3 A 292 SER VAL PRO ALA LEU THR ALA VAL GLU THR GLY HIS THR SEQRES 4 A 292 SER GLN VAL VAL PRO GLY ASP THR MET GLN THR ARG HIS SEQRES 5 A 292 VAL LYS ASN TYR HIS SER ARG THR GLU SER SER ILE GLU SEQRES 6 A 292 ASN PHE LEU CYS ARG ALA ALA CYS VAL TYR ILE ALA THR SEQRES 7 A 292 TYR LYS SER ALA GLY GLY THR PRO THR GLU ARG TYR ALA SEQRES 8 A 292 SER TRP ARG ILE ASN THR ARG GLN MET VAL GLN LEU ARG SEQRES 9 A 292 ARG LYS PHE GLU LEU PHE THR TYR LEU ARG PHE ASP MET SEQRES 10 A 292 GLU ILE THR PHE VAL ILE THR SER THR GLN ASP PRO GLY SEQRES 11 A 292 THR GLN LEU ALA GLN ASP MET PRO VAL LEU THR HIS GLN SEQRES 12 A 292 ILE MET TYR ILE PRO PRO GLY GLY PRO VAL PRO ASN SER SEQRES 13 A 292 ALA THR ASP PHE ALA TRP GLN SER SER THR ASN PRO SER SEQRES 14 A 292 ILE PHE TRP THR GLU GLY CYS ALA PRO ALA ARG MET SER SEQRES 15 A 292 VAL PRO PHE ILE SER ILE GLY ASN ALA TYR SER ASN PHE SEQRES 16 A 292 TYR ASP GLY TRP SER HIS PHE THR GLN GLU GLY VAL TYR SEQRES 17 A 292 GLY PHE ASN SER LEU ASN ASN MET GLY HIS ILE TYR VAL SEQRES 18 A 292 ARG HIS VAL ASN GLU GLN SER LEU GLY VAL SER THR SER SEQRES 19 A 292 THR LEU ARG VAL TYR PHE LYS PRO LYS HIS VAL ARG ALA SEQRES 20 A 292 TRP VAL PRO ARG PRO PRO ARG LEU SER PRO TYR VAL LYS SEQRES 21 A 292 SER SER ASN VAL ASN PHE LYS PRO THR ALA VAL THR THR SEQRES 22 A 292 GLU ARG LYS ASP ILE ASN ASP VAL GLY THR LEU ARG PRO SEQRES 23 A 292 VAL GLY TYR THR ASN HIS SEQRES 1 B 329 GLY ALA GLN VAL SER THR GLN LYS THR GLY ALA HIS GLU SEQRES 2 B 329 THR SER LEU THR ALA SER GLY ASN SER THR ILE HIS TYR SEQRES 3 B 329 THR ASN ILE ASN TYR TYR LYS ASP ALA ALA SER ASN SER SEQRES 4 B 329 ALA ASN ARG GLN ASP PHE THR GLN ASP PRO SER LYS PHE SEQRES 5 B 329 THR GLU PRO MET LYS ASP VAL MET ILE LYS SER LEU PRO SEQRES 6 B 329 ALA LEU ASN SER PRO THR VAL GLU GLU CYS GLY PHE SER SEQRES 7 B 329 ASP ARG VAL ARG SER ILE THR LEU GLY ASN SER THR ILE SEQRES 8 B 329 THR THR GLN GLU CYS ALA ASN VAL VAL VAL GLY TYR GLY SEQRES 9 B 329 VAL TRP PRO SER TYR LEU GLN ASP ASN GLU ALA THR ALA SEQRES 10 B 329 GLU ASP GLN PRO THR GLN PRO ASP VAL ALA THR CYS ARG SEQRES 11 B 329 PHE TYR THR LEU ASP SER ILE GLN TRP GLN LYS GLU SER SEQRES 12 B 329 ASP GLY TRP TRP TRP LYS PHE PRO GLU ALA LEU LYS ASN SEQRES 13 B 329 MET GLY LEU PHE GLY GLN ASN MET GLU TYR HIS TYR LEU SEQRES 14 B 329 GLY ARG SER GLY TYR THR ILE HIS VAL GLN CYS ASN ALA SEQRES 15 B 329 SER LYS PHE HIS GLN GLY CYS LEU LEU VAL VAL CYS VAL SEQRES 16 B 329 PRO GLU ALA GLU MET GLY CYS SER ASP VAL GLU ARG GLU SEQRES 17 B 329 VAL VAL ALA ALA SER LEU SER SER GLU ASP THR ALA LYS SEQRES 18 B 329 SER PHE SER ARG THR GLU SER ASN GLY GLN HIS THR VAL SEQRES 19 B 329 GLN THR VAL VAL TYR ASN ALA GLY MET GLY VAL GLY VAL SEQRES 20 B 329 GLY ASN LEU THR ILE PHE PRO HIS GLN TRP ILE ASN LEU SEQRES 21 B 329 ARG THR ASN ASN SER ALA THR ILE VAL MET PRO TYR ILE SEQRES 22 B 329 ASN SER VAL PRO MET ASP ASN MET PHE ARG HIS TYR ASN SEQRES 23 B 329 PHE THR LEU MET ILE ILE PRO PHE ALA LYS LEU GLU TYR SEQRES 24 B 329 THR GLU GLN ALA SER ASN TYR VAL PRO ILE THR VAL THR SEQRES 25 B 329 VAL ALA PRO MET CYS ALA GLU TYR ASN GLY LEU ARG LEU SEQRES 26 B 329 ALA SER HIS GLN SEQRES 1 C 238 GLY LEU PRO THR MET LEU THR PRO GLY SER ASN GLN PHE SEQRES 2 C 238 LEU THR SER ASP ASP PHE GLN SER PRO SER ALA MET PRO SEQRES 3 C 238 GLN PHE ASP VAL THR PRO GLU MET LYS ILE PRO GLY GLU SEQRES 4 C 238 VAL HIS ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 C 238 VAL PRO VAL ASN ASN THR LYS GLU ASN ILE ASN SER MET SEQRES 6 C 238 GLU ALA TYR ARG ILE PRO VAL THR GLY GLY ASP GLN LEU SEQRES 7 C 238 HIS THR GLN VAL PHE GLY PHE GLN MET GLN PRO GLY LEU SEQRES 8 C 238 ASN SER VAL PHE LYS ARG THR LEU LEU GLY GLU ILE LEU SEQRES 9 C 238 ASN TYR TYR ALA HIS TRP SER GLY SER VAL LYS LEU THR SEQRES 10 C 238 PHE VAL PHE CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 C 238 LEU LEU ALA TYR SER PRO PRO GLY ALA SER PRO PRO GLN SEQRES 12 C 238 ASN ARG LYS GLN ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 C 238 ASP VAL GLY LEU GLN SER SER CYS VAL LEU CYS ILE PRO SEQRES 14 C 238 TRP ILE SER GLN THR HIS TYR ARG LEU VAL GLN GLN ASP SEQRES 15 C 238 GLU TYR THR SER ALA GLY TYR VAL THR CYS TRP TYR GLN SEQRES 16 C 238 THR GLY LEU ILE VAL PRO PRO GLY ALA PRO PRO SER CYS SEQRES 17 C 238 THR ILE LEU CYS PHE ALA SER ALA CYS ASN ASP PHE SER SEQRES 18 C 238 VAL ARG ASN LEU ARG ASP THR PRO PHE ILE GLU GLN THR SEQRES 19 C 238 GLN LEU LEU GLN HET SPH A 301 21 HETNAM SPH SPHINGOSINE FORMUL 4 SPH C18 H37 N O2 HELIX 1 AA1 SER A 63 CYS A 69 1 7 HELIX 2 AA2 THR A 85 ARG A 89 5 5 HELIX 3 AA3 MET A 100 GLU A 108 1 9 HELIX 4 AA4 ASP A 159 GLN A 163 5 5 HELIX 5 AA5 ASP B 35 ASN B 39 5 5 HELIX 6 AA6 GLN B 112 ALA B 116 5 5 HELIX 7 AA7 LYS B 150 ALA B 154 5 5 HELIX 8 AA8 LEU B 160 MET B 165 1 6 HELIX 9 AA9 VAL B 211 SER B 216 1 6 HELIX 10 AB1 GLY B 247 LEU B 251 5 5 HELIX 11 AB2 ASN C 42 VAL C 49 5 8 HELIX 12 AB3 THR C 58 SER C 64 1 7 HELIX 13 AB4 THR C 98 TYR C 107 1 10 HELIX 14 AB5 ASN C 144 GLY C 151 1 8 SHEET 1 AA1 4 ALA A 72 ILE A 76 0 SHEET 2 AA1 4 ARG A 237 PRO A 250 -1 O VAL A 238 N VAL A 74 SHEET 3 AA1 4 PHE A 110 PHE A 121 -1 N ASP A 116 O LYS A 243 SHEET 4 AA1 4 TYR A 192 SER A 193 -1 O TYR A 192 N LEU A 113 SHEET 1 AA2 4 ALA A 179 VAL A 183 0 SHEET 2 AA2 4 PHE A 110 PHE A 121 -1 N MET A 117 O VAL A 183 SHEET 3 AA2 4 ARG A 237 PRO A 250 -1 O LYS A 243 N ASP A 116 SHEET 4 AA2 4 GLU C 39 VAL C 40 -1 O VAL C 40 N ALA A 247 SHEET 1 AA3 2 THR A 124 SER A 125 0 SHEET 2 AA3 2 SER A 234 THR A 235 -1 O THR A 235 N THR A 124 SHEET 1 AA4 3 ILE A 170 THR A 173 0 SHEET 2 AA4 3 THR A 141 ILE A 147 -1 N HIS A 142 O TRP A 172 SHEET 3 AA4 3 HIS A 218 HIS A 223 -1 O HIS A 218 N ILE A 147 SHEET 1 AA5 2 THR B 86 LEU B 87 0 SHEET 2 AA5 2 SER B 90 THR B 91 -1 O SER B 90 N LEU B 87 SHEET 1 AA6 4 ILE B 138 GLN B 139 0 SHEET 2 AA6 4 PRO B 309 VAL B 312 -1 O ILE B 310 N ILE B 138 SHEET 3 AA6 4 ILE B 177 GLN B 180 -1 N GLN B 180 O THR B 311 SHEET 4 AA6 4 SER B 266 ILE B 269 -1 O ALA B 267 N VAL B 179 SHEET 1 AA7 5 LYS B 222 SER B 223 0 SHEET 2 AA7 5 TRP B 147 TRP B 148 -1 N TRP B 148 O LYS B 222 SHEET 3 AA7 5 PHE B 288 ILE B 293 -1 O ILE B 292 N TRP B 147 SHEET 4 AA7 5 LEU B 192 PRO B 197 -1 N LEU B 192 O ILE B 293 SHEET 5 AA7 5 HIS B 256 TRP B 258 -1 O GLN B 257 N VAL B 193 SHEET 1 AA8 2 ARG B 172 TYR B 175 0 SHEET 2 AA8 2 PRO B 316 GLU B 320 -1 O MET B 317 N GLY B 174 SHEET 1 AA9 3 SER C 51 VAL C 53 0 SHEET 2 AA9 3 THR C 209 ALA C 216 -1 O CYS C 212 N VAL C 53 SHEET 3 AA9 3 ILE C 70 PRO C 71 -1 N ILE C 70 O ILE C 210 SHEET 1 AB1 4 SER C 51 VAL C 53 0 SHEET 2 AB1 4 THR C 209 ALA C 216 -1 O CYS C 212 N VAL C 53 SHEET 3 AB1 4 VAL C 114 CYS C 121 -1 N THR C 117 O PHE C 213 SHEET 4 AB1 4 CYS C 164 CYS C 167 -1 O LEU C 166 N LEU C 116 SHEET 1 AB2 4 GLN C 81 GLN C 86 0 SHEET 2 AB2 4 TYR C 189 TYR C 194 -1 O VAL C 190 N PHE C 85 SHEET 3 AB2 4 LYS C 129 TYR C 134 -1 N LEU C 131 O TRP C 193 SHEET 4 AB2 4 THR C 152 ASP C 157 -1 O TRP C 156 N PHE C 130 SHEET 1 AB3 3 ARG C 177 LEU C 178 0 SHEET 2 AB3 3 HIS C 109 SER C 111 -1 N TRP C 110 O ARG C 177 SHEET 3 AB3 3 SER C 221 VAL C 222 -1 O SER C 221 N SER C 111 LINK CE MET A 181 C18 SPH A 301 1555 1555 1.49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000