HEADER SIGNALING PROTEIN 07-MAR-21 7EAO TITLE THE STRUCTURE OF THE A20-BINDING INHIBITOR OF NF-KB 1 IN COMPLEX WITH TITLE 2 TRI-UBIQUITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYUBIQUITIN-C; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-228; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TNFAIP3-INTERACTING PROTEIN 1; COMPND 8 CHAIN: B, C; COMPND 9 SYNONYM: A20-BINDING INHIBITOR OF NF-KAPPA-B ACTIVATION 1,ABIN-1,HIV- COMPND 10 1 NEF-INTERACTING PROTEIN,NEF-ASSOCIATED FACTOR 1,NAF1,NIP40-1, COMPND 11 VIRION-ASSOCIATED NUCLEAR SHUTTLING PROTEIN,VAN,HVAN; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TNIP1, KIAA0113, NAF1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UBIQUITIN, NF-KB, UBIQUITIN-BINDING PROTEIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.C.LO,S.C.LIN REVDAT 2 29-NOV-23 7EAO 1 REMARK REVDAT 1 21-JUL-21 7EAO 0 JRNL AUTH J.Y.HONG,S.C.LIN,B.J.KUO,Y.C.LO JRNL TITL STRUCTURAL AND BIOCHEMICAL BASIS FOR HIGHER-ORDER ASSEMBLY JRNL TITL 2 BETWEEN A20-BINDING INHIBITOR OF NF-KAPPA B 1 (ABIN1) AND JRNL TITL 3 M1-LINKED UBIQUITINS. JRNL REF J.MOL.BIOL. V. 433 67116 2021 JRNL REFN ESSN 1089-8638 JRNL PMID 34161781 JRNL DOI 10.1016/J.JMB.2021.167116 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 9440 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.600 REMARK 3 FREE R VALUE TEST SET COUNT : 906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 5.1956 0.99 1567 176 0.2062 0.2695 REMARK 3 2 5.1956 - 4.1277 1.00 1524 181 0.1981 0.2395 REMARK 3 3 4.1277 - 3.6070 0.99 1546 151 0.2127 0.2717 REMARK 3 4 3.6070 - 3.2777 0.98 1498 165 0.2387 0.3248 REMARK 3 5 3.2777 - 3.0430 0.89 1409 124 0.2767 0.3517 REMARK 3 6 3.0430 - 2.9000 0.65 990 109 0.2885 0.3640 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2868 REMARK 3 ANGLE : 0.665 3840 REMARK 3 CHIRALITY : 0.042 443 REMARK 3 PLANARITY : 0.003 502 REMARK 3 DIHEDRAL : 12.319 1828 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.0298 -13.3778 -1.3608 REMARK 3 T TENSOR REMARK 3 T11: 0.4755 T22: 0.8292 REMARK 3 T33: 0.4439 T12: 0.0010 REMARK 3 T13: -0.2793 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.6857 L22: 3.7482 REMARK 3 L33: 2.5703 L12: -0.8362 REMARK 3 L13: 1.0674 L23: -0.2331 REMARK 3 S TENSOR REMARK 3 S11: -0.7857 S12: 0.8572 S13: 0.5768 REMARK 3 S21: -1.0288 S22: 0.5400 S23: 0.7992 REMARK 3 S31: 0.0080 S32: -1.0920 S33: 0.0032 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7137 -14.2765 6.2704 REMARK 3 T TENSOR REMARK 3 T11: 0.3646 T22: 0.4395 REMARK 3 T33: 0.2909 T12: -0.1370 REMARK 3 T13: -0.1003 T23: 0.0892 REMARK 3 L TENSOR REMARK 3 L11: 3.0917 L22: 4.0089 REMARK 3 L33: 4.5829 L12: -0.3711 REMARK 3 L13: -0.6333 L23: -0.4647 REMARK 3 S TENSOR REMARK 3 S11: -0.2808 S12: 0.3050 S13: 0.4467 REMARK 3 S21: -0.0013 S22: 0.2832 S23: -0.0408 REMARK 3 S31: 0.1078 S32: -0.3502 S33: 0.1929 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0155 -14.8074 9.3961 REMARK 3 T TENSOR REMARK 3 T11: 0.3038 T22: 0.3812 REMARK 3 T33: 0.1769 T12: -0.1612 REMARK 3 T13: -0.1144 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 1.5914 L22: 3.0191 REMARK 3 L33: 0.9981 L12: -0.5146 REMARK 3 L13: -1.0524 L23: 0.8748 REMARK 3 S TENSOR REMARK 3 S11: -0.0895 S12: 0.5611 S13: -0.2904 REMARK 3 S21: -0.7040 S22: 0.1402 S23: -0.1340 REMARK 3 S31: -0.0527 S32: -0.1542 S33: 0.1145 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7985 3.4354 23.8224 REMARK 3 T TENSOR REMARK 3 T11: 0.1121 T22: 0.2195 REMARK 3 T33: 0.1819 T12: 0.0727 REMARK 3 T13: -0.0469 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 4.4896 L22: 3.4469 REMARK 3 L33: 2.3218 L12: -2.2821 REMARK 3 L13: 0.7861 L23: 0.8670 REMARK 3 S TENSOR REMARK 3 S11: 0.3406 S12: 0.0958 S13: 0.4133 REMARK 3 S21: -0.2324 S22: -0.2873 S23: 0.0563 REMARK 3 S31: -0.0163 S32: -0.0054 S33: -0.0362 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9374 5.5871 25.9621 REMARK 3 T TENSOR REMARK 3 T11: -0.1136 T22: 0.1326 REMARK 3 T33: 0.3183 T12: 0.1649 REMARK 3 T13: -0.2021 T23: 0.0872 REMARK 3 L TENSOR REMARK 3 L11: 1.8941 L22: 1.1200 REMARK 3 L33: 1.6085 L12: -0.3421 REMARK 3 L13: 0.2468 L23: 0.1719 REMARK 3 S TENSOR REMARK 3 S11: 0.3105 S12: 0.1692 S13: -0.4107 REMARK 3 S21: -0.0844 S22: -0.1776 S23: 0.0144 REMARK 3 S31: 0.0846 S32: 0.1747 S33: 0.3256 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.9398 10.2905 14.4060 REMARK 3 T TENSOR REMARK 3 T11: 0.3584 T22: 0.3452 REMARK 3 T33: 0.3804 T12: 0.1045 REMARK 3 T13: -0.2415 T23: -0.1495 REMARK 3 L TENSOR REMARK 3 L11: 4.2299 L22: 2.4061 REMARK 3 L33: 3.3275 L12: 0.7501 REMARK 3 L13: 0.6223 L23: 0.4739 REMARK 3 S TENSOR REMARK 3 S11: 0.2450 S12: 0.3698 S13: -0.2896 REMARK 3 S21: -0.7260 S22: 0.0664 S23: 0.4368 REMARK 3 S31: 0.4770 S32: -0.3937 S33: -0.1657 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 451 THROUGH 513 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4989 -15.1461 33.1569 REMARK 3 T TENSOR REMARK 3 T11: 0.2012 T22: 0.0842 REMARK 3 T33: 0.1856 T12: -0.0903 REMARK 3 T13: -0.0133 T23: 0.0570 REMARK 3 L TENSOR REMARK 3 L11: 2.9284 L22: 2.9036 REMARK 3 L33: 3.7338 L12: 1.4378 REMARK 3 L13: 1.3933 L23: 2.2508 REMARK 3 S TENSOR REMARK 3 S11: -0.2066 S12: 0.4369 S13: 0.3361 REMARK 3 S21: 0.1567 S22: 0.1822 S23: 0.0606 REMARK 3 S31: 0.0198 S32: 0.3458 S33: 0.0300 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 451 THROUGH 512 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.0005 -13.2480 33.8913 REMARK 3 T TENSOR REMARK 3 T11: 0.1090 T22: 0.1015 REMARK 3 T33: 0.2026 T12: -0.0154 REMARK 3 T13: -0.0128 T23: 0.0376 REMARK 3 L TENSOR REMARK 3 L11: 5.7613 L22: 3.2675 REMARK 3 L33: 4.2606 L12: 3.6187 REMARK 3 L13: 3.4730 L23: 2.9671 REMARK 3 S TENSOR REMARK 3 S11: -0.0626 S12: -0.1205 S13: 0.3754 REMARK 3 S21: 0.1834 S22: -0.1415 S23: 0.4372 REMARK 3 S31: 0.0795 S32: -0.2728 S33: 0.2594 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7EAO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1300021080. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9441 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : 16.72 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.46600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.170 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7EAL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CITRATE TRIBASIC, 20% REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.81900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.92550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.81900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.92550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -68.08938 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -40.92550 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 57.59294 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 273 REMARK 465 ARG A 274 REMARK 465 GLY A 275 REMARK 465 GLY A 276 REMARK 465 GLU B 415 REMARK 465 ILE B 416 REMARK 465 GLN B 417 REMARK 465 ARG B 418 REMARK 465 LEU B 419 REMARK 465 ASN B 420 REMARK 465 LYS B 421 REMARK 465 ALA B 422 REMARK 465 LEU B 423 REMARK 465 GLU B 424 REMARK 465 GLU B 425 REMARK 465 ALA B 426 REMARK 465 LEU B 427 REMARK 465 SER B 428 REMARK 465 ILE B 429 REMARK 465 GLN B 430 REMARK 465 THR B 431 REMARK 465 PRO B 432 REMARK 465 PRO B 433 REMARK 465 SER B 434 REMARK 465 SER B 435 REMARK 465 PRO B 436 REMARK 465 PRO B 437 REMARK 465 THR B 438 REMARK 465 ALA B 439 REMARK 465 PHE B 440 REMARK 465 GLY B 441 REMARK 465 SER B 442 REMARK 465 PRO B 443 REMARK 465 GLU B 444 REMARK 465 GLY B 445 REMARK 465 ALA B 446 REMARK 465 GLY B 447 REMARK 465 ALA B 448 REMARK 465 LEU B 449 REMARK 465 LEU B 450 REMARK 465 GLU C 415 REMARK 465 ILE C 416 REMARK 465 GLN C 417 REMARK 465 ARG C 418 REMARK 465 LEU C 419 REMARK 465 ASN C 420 REMARK 465 LYS C 421 REMARK 465 ALA C 422 REMARK 465 LEU C 423 REMARK 465 GLU C 424 REMARK 465 GLU C 425 REMARK 465 ALA C 426 REMARK 465 LEU C 427 REMARK 465 SER C 428 REMARK 465 ILE C 429 REMARK 465 GLN C 430 REMARK 465 THR C 431 REMARK 465 PRO C 432 REMARK 465 PRO C 433 REMARK 465 SER C 434 REMARK 465 SER C 435 REMARK 465 PRO C 436 REMARK 465 PRO C 437 REMARK 465 THR C 438 REMARK 465 ALA C 439 REMARK 465 PHE C 440 REMARK 465 GLY C 441 REMARK 465 SER C 442 REMARK 465 PRO C 443 REMARK 465 GLU C 444 REMARK 465 GLY C 445 REMARK 465 ALA C 446 REMARK 465 GLY C 447 REMARK 465 ALA C 448 REMARK 465 LEU C 449 REMARK 465 LEU C 450 REMARK 465 ASP C 513 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS C 512 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 34 -31.91 -143.92 REMARK 500 ALA A 46 18.87 54.89 REMARK 500 THR A 109 -178.42 -69.11 REMARK 500 THR A 207 -162.25 -71.44 REMARK 500 GLU A 234 -23.63 -154.79 REMARK 500 ALA B 510 -70.21 -88.34 REMARK 500 REMARK 500 REMARK: NULL DBREF 7EAO A 1 276 UNP P0CG48 UBC_HUMAN 1 228 DBREF 7EAO B 415 513 UNP Q15025 TNIP1_HUMAN 415 513 DBREF 7EAO C 415 513 UNP Q15025 TNIP1_HUMAN 415 513 SEQADV 7EAO THR B 506 UNP Q15025 ALA 506 CONFLICT SEQADV 7EAO THR C 506 UNP Q15025 ALA 506 CONFLICT SEQRES 1 A 228 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 A 228 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 A 228 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 A 228 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 A 228 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 A 228 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY MET GLN SEQRES 7 A 228 ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE THR LEU SEQRES 8 A 228 GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL LYS ALA SEQRES 9 A 228 LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP GLN GLN SEQRES 10 A 228 ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG SEQRES 11 A 228 THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER THR LEU SEQRES 12 A 228 HIS LEU VAL LEU ARG LEU ARG GLY GLY MET GLN ILE PHE SEQRES 13 A 228 VAL LYS THR LEU THR GLY LYS THR ILE THR LEU GLU VAL SEQRES 14 A 228 GLU PRO SER ASP THR ILE GLU ASN VAL LYS ALA LYS ILE SEQRES 15 A 228 GLN ASP LYS GLU GLY ILE PRO PRO ASP GLN GLN ARG LEU SEQRES 16 A 228 ILE PHE ALA GLY LYS GLN LEU GLU ASP GLY ARG THR LEU SEQRES 17 A 228 SER ASP TYR ASN ILE GLN LYS GLU SER THR LEU HIS LEU SEQRES 18 A 228 VAL LEU ARG LEU ARG GLY GLY SEQRES 1 B 99 GLU ILE GLN ARG LEU ASN LYS ALA LEU GLU GLU ALA LEU SEQRES 2 B 99 SER ILE GLN THR PRO PRO SER SER PRO PRO THR ALA PHE SEQRES 3 B 99 GLY SER PRO GLU GLY ALA GLY ALA LEU LEU ARG LYS GLN SEQRES 4 B 99 GLU LEU VAL THR GLN ASN GLU LEU LEU LYS GLN GLN VAL SEQRES 5 B 99 LYS ILE PHE GLU GLU ASP PHE GLN ARG GLU ARG SER ASP SEQRES 6 B 99 ARG GLU ARG MET ASN GLU GLU LYS GLU GLU LEU LYS LYS SEQRES 7 B 99 GLN VAL GLU LYS LEU GLN ALA GLN VAL THR LEU SER ASN SEQRES 8 B 99 THR GLN LEU LYS ALA PHE LYS ASP SEQRES 1 C 99 GLU ILE GLN ARG LEU ASN LYS ALA LEU GLU GLU ALA LEU SEQRES 2 C 99 SER ILE GLN THR PRO PRO SER SER PRO PRO THR ALA PHE SEQRES 3 C 99 GLY SER PRO GLU GLY ALA GLY ALA LEU LEU ARG LYS GLN SEQRES 4 C 99 GLU LEU VAL THR GLN ASN GLU LEU LEU LYS GLN GLN VAL SEQRES 5 C 99 LYS ILE PHE GLU GLU ASP PHE GLN ARG GLU ARG SER ASP SEQRES 6 C 99 ARG GLU ARG MET ASN GLU GLU LYS GLU GLU LEU LYS LYS SEQRES 7 C 99 GLN VAL GLU LYS LEU GLN ALA GLN VAL THR LEU SER ASN SEQRES 8 C 99 THR GLN LEU LYS ALA PHE LYS ASP HELIX 1 AA1 THR A 22 LYS A 33 1 12 HELIX 2 AA2 PRO A 37 ASP A 39 5 3 HELIX 3 AA3 THR A 55 ASN A 60 5 6 HELIX 4 AA4 THR A 122 GLY A 135 1 14 HELIX 5 AA5 PRO A 137 ASP A 139 5 3 HELIX 6 AA6 THR A 222 GLY A 235 1 14 HELIX 7 AA7 PRO A 237 ASP A 239 5 3 HELIX 8 AA8 LYS B 452 LYS B 512 1 61 HELIX 9 AA9 LYS C 452 LYS C 512 1 61 SHEET 1 AA1 5 THR A 12 GLU A 16 0 SHEET 2 AA1 5 GLN A 2 THR A 7 -1 N ILE A 3 O LEU A 15 SHEET 3 AA1 5 THR A 66 LEU A 71 1 O LEU A 67 N PHE A 4 SHEET 4 AA1 5 GLN A 41 PHE A 45 -1 N ARG A 42 O VAL A 70 SHEET 5 AA1 5 LYS A 48 GLN A 49 -1 O LYS A 48 N PHE A 45 SHEET 1 AA2 5 THR A 112 GLU A 116 0 SHEET 2 AA2 5 GLN A 102 LYS A 106 -1 N ILE A 103 O LEU A 115 SHEET 3 AA2 5 THR A 166 LEU A 171 1 O LEU A 167 N LYS A 106 SHEET 4 AA2 5 GLN A 141 PHE A 145 -1 N ARG A 142 O VAL A 170 SHEET 5 AA2 5 LYS A 148 GLN A 149 -1 O LYS A 148 N PHE A 145 SHEET 1 AA3 5 THR A 212 GLU A 216 0 SHEET 2 AA3 5 GLN A 202 LYS A 206 -1 N ILE A 203 O LEU A 215 SHEET 3 AA3 5 THR A 266 LEU A 271 1 O LEU A 267 N PHE A 204 SHEET 4 AA3 5 GLN A 241 PHE A 245 -1 N ILE A 244 O HIS A 268 SHEET 5 AA3 5 LYS A 248 GLN A 249 -1 O LYS A 248 N PHE A 245 CRYST1 95.638 81.851 61.056 90.00 109.39 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010456 0.000000 0.003681 0.00000 SCALE2 0.000000 0.012217 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017364 0.00000