HEADER IMMUNE SYSTEM 30-MAY-21 7EYC TITLE CRYSTAL STRUCTURE OF TAU AND ACETYLATED TAU PEPTIDE ANTIGEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY, LIGHT CHAIN; COMPND 3 CHAIN: L, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTIBODY, HEAVY CHAIN; COMPND 7 CHAIN: H, A; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ACETYLATED TAU PEPTIDE; COMPND 11 CHAIN: P, Q; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS ANTIBODY, TAU, ALZHEIME DISEASE, PROTEIN BINDING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.HONG,J.PARK REVDAT 4 16-OCT-24 7EYC 1 REMARK REVDAT 3 29-NOV-23 7EYC 1 REMARK REVDAT 2 21-JUN-23 7EYC 1 JRNL REVDAT 1 01-JUN-22 7EYC 0 JRNL AUTH H.L.SONG,N.Y.KIM,J.PARK,M.I.KIM,Y.N.JEON,S.J.LEE,K.CHO, JRNL AUTH 2 Y.L.SHIM,K.H.LEE,Y.S.MUN,J.A.SONG,M.S.KIM,C.G.PACK,M.JUNG, JRNL AUTH 3 H.JANG,D.L.NA,M.HONG,D.H.KIM,S.Y.YOON JRNL TITL MONOCLONAL ANTIBODY Y01 PREVENTS TAUOPATHY PROGRESSION JRNL TITL 2 INDUCED BY LYSINE 280-ACETYLATED TAU IN CELL AND MOUSE JRNL TITL 3 MODELS. JRNL REF J.CLIN.INVEST. V. 133 2023 JRNL REFN ISSN 0021-9738 JRNL PMID 36917188 JRNL DOI 10.1172/JCI156537 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 29307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1541 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1999 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6673 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 67 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : -2.15000 REMARK 3 B33 (A**2) : 2.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.826 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.298 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6833 ; 0.011 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9304 ; 1.505 ; 1.637 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 870 ; 6.717 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 280 ;37.169 ;23.071 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1102 ;17.117 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.760 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 912 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5108 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7EYC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1300022513. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9730 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30917 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.489 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.42200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4LEX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 70% (+/-)-2-METHYL-2,4-PENTANEDIOL, REMARK 280 0.1 M HEPES, PH 7.5, 10 MM CALCIUM CHLORIDE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.29950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.18550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.93100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.18550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.29950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.93100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA H 211 REMARK 465 LEU P 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 145 CG CD CE NZ REMARK 470 LYS B 190 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS L 149 OE1 GLU L 195 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER H 74 OH TYR A 53 4555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR L 140 C PRO L 141 N 0.143 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR L 32 59.69 -95.43 REMARK 500 VAL L 51 -51.38 73.87 REMARK 500 THR L 69 -6.14 -144.36 REMARK 500 SER H 15 -1.76 75.22 REMARK 500 VAL B 51 -55.66 73.99 REMARK 500 SER B 156 -72.94 -130.04 REMARK 500 SER A 15 -1.57 73.68 REMARK 500 SER A 124 -168.00 -128.69 REMARK 500 ALY Q 6 138.13 -175.36 REMARK 500 REMARK 500 REMARK: NULL DBREF 7EYC L 1 212 PDB 7EYC 7EYC 1 212 DBREF 7EYC H 1 211 PDB 7EYC 7EYC 1 211 DBREF 7EYC B 1 212 PDB 7EYC 7EYC 1 212 DBREF 7EYC A 1 211 PDB 7EYC 7EYC 1 211 DBREF 7EYC P 3 10 PDB 7EYC 7EYC 3 10 DBREF 7EYC Q 3 10 PDB 7EYC 7EYC 3 10 SEQRES 1 L 217 ASP VAL VAL MET THR GLN THR PRO LEU SER LEU PRO VAL SEQRES 2 L 217 THR LEU GLY GLN PRO ALA SER ILE SER CYS LYS SER SER SEQRES 3 L 217 GLN SER LEU LEU ASP SER ASP GLY LYS THR TYR LEU ASN SEQRES 4 L 217 TRP PHE GLN GLN ARG PRO GLY GLN SER PRO LYS ARG LEU SEQRES 5 L 217 ILE SER LEU VAL SER LYS LEU ASP SER GLY VAL PRO ASP SEQRES 6 L 217 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 L 217 LYS ILE SER ARG VAL GLU ALA GLU ASP VAL GLY VAL TYR SEQRES 8 L 217 TYR CYS TRP GLN GLY SER HIS PHE PRO TYR THR PHE GLY SEQRES 9 L 217 GLN GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA SEQRES 10 L 217 PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU SEQRES 11 L 217 LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN SEQRES 12 L 217 PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP SEQRES 13 L 217 ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR SEQRES 14 L 217 GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER SEQRES 15 L 217 THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS SEQRES 16 L 217 VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER SEQRES 17 L 217 PRO VAL THR LYS SER PHE ASN ARG GLY SEQRES 1 H 214 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 214 PRO SER GLN THR LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 H 214 ASP SER ILE THR SER GLY TYR TRP ASN TRP ILE ARG GLN SEQRES 4 H 214 PRO PRO GLY LYS GLY LEU GLU TYR ILE GLY TYR ILE ARG SEQRES 5 H 214 TYR SER GLY ARG THR TYR TYR ASN PRO SER LEU LYS SER SEQRES 6 H 214 ARG VAL THR ILE SER ARG ASP THR SER LYS ASN GLN PHE SEQRES 7 H 214 SER LEU LYS LEU SER SER VAL THR ALA ALA ASP THR ALA SEQRES 8 H 214 VAL TYR TYR CYS ALA SER VAL TYR PHE THR TYR TRP GLY SEQRES 9 H 214 GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS SEQRES 10 H 214 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER SEQRES 11 H 214 THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 12 H 214 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 13 H 214 GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 14 H 214 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 15 H 214 THR VAL PRO SER SER SER LEU GLY THR GLU THR TYR ILE SEQRES 16 H 214 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 17 H 214 LYS LYS VAL GLU ALA ALA SEQRES 1 B 217 ASP VAL VAL MET THR GLN THR PRO LEU SER LEU PRO VAL SEQRES 2 B 217 THR LEU GLY GLN PRO ALA SER ILE SER CYS LYS SER SER SEQRES 3 B 217 GLN SER LEU LEU ASP SER ASP GLY LYS THR TYR LEU ASN SEQRES 4 B 217 TRP PHE GLN GLN ARG PRO GLY GLN SER PRO LYS ARG LEU SEQRES 5 B 217 ILE SER LEU VAL SER LYS LEU ASP SER GLY VAL PRO ASP SEQRES 6 B 217 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 B 217 LYS ILE SER ARG VAL GLU ALA GLU ASP VAL GLY VAL TYR SEQRES 8 B 217 TYR CYS TRP GLN GLY SER HIS PHE PRO TYR THR PHE GLY SEQRES 9 B 217 GLN GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA SEQRES 10 B 217 PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU SEQRES 11 B 217 LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN SEQRES 12 B 217 PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP SEQRES 13 B 217 ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR SEQRES 14 B 217 GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER SEQRES 15 B 217 THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS SEQRES 16 B 217 VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER SEQRES 17 B 217 PRO VAL THR LYS SER PHE ASN ARG GLY SEQRES 1 A 214 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 A 214 PRO SER GLN THR LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 A 214 ASP SER ILE THR SER GLY TYR TRP ASN TRP ILE ARG GLN SEQRES 4 A 214 PRO PRO GLY LYS GLY LEU GLU TYR ILE GLY TYR ILE ARG SEQRES 5 A 214 TYR SER GLY ARG THR TYR TYR ASN PRO SER LEU LYS SER SEQRES 6 A 214 ARG VAL THR ILE SER ARG ASP THR SER LYS ASN GLN PHE SEQRES 7 A 214 SER LEU LYS LEU SER SER VAL THR ALA ALA ASP THR ALA SEQRES 8 A 214 VAL TYR TYR CYS ALA SER VAL TYR PHE THR TYR TRP GLY SEQRES 9 A 214 GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS SEQRES 10 A 214 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER SEQRES 11 A 214 THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 12 A 214 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 13 A 214 GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 14 A 214 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 15 A 214 THR VAL PRO SER SER SER LEU GLY THR GLU THR TYR ILE SEQRES 16 A 214 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 17 A 214 LYS LYS VAL GLU ALA ALA SEQRES 1 P 8 ILE ILE ASN ALY LYS LEU ASP LEU SEQRES 1 Q 8 ILE ILE ASN ALY LYS LEU ASP LEU HET ALY P 6 12 HET ALY Q 6 12 HETNAM ALY N(6)-ACETYLLYSINE FORMUL 5 ALY 2(C8 H16 N2 O3) FORMUL 7 HOH *67(H2 O) HELIX 1 AA1 GLU L 79 VAL L 83 5 5 HELIX 2 AA2 SER L 121 SER L 127 1 7 HELIX 3 AA3 LYS L 183 HIS L 189 1 7 HELIX 4 AA4 THR H 83 THR H 87 5 5 HELIX 5 AA5 SER H 94 THR H 98 5 5 HELIX 6 AA6 SER H 124 LYS H 126 5 3 HELIX 7 AA7 SER H 153 ALA H 155 5 3 HELIX 8 AA8 SER H 184 LEU H 186 5 3 HELIX 9 AA9 LYS H 198 ASN H 201 5 4 HELIX 10 AB1 GLU B 79 VAL B 83 5 5 HELIX 11 AB2 SER B 121 SER B 127 1 7 HELIX 12 AB3 LYS B 183 HIS B 189 1 7 HELIX 13 AB4 LEU A 63 SER A 65 5 3 HELIX 14 AB5 THR A 73 LYS A 75 5 3 HELIX 15 AB6 THR A 83 THR A 87 5 5 HELIX 16 AB7 TYR A 96 THR A 98 5 3 HELIX 17 AB8 SER A 124 LYS A 126 5 3 HELIX 18 AB9 SER A 153 ALA A 155 5 3 HELIX 19 AC1 SER A 184 LEU A 186 5 3 HELIX 20 AC2 LYS A 198 ASN A 201 5 4 SHEET 1 AA1 4 MET L 4 THR L 7 0 SHEET 2 AA1 4 ALA L 19 SER L 25 -1 O SER L 22 N THR L 7 SHEET 3 AA1 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AA1 4 PHE L 62 SER L 67 -1 N SER L 63 O LYS L 74 SHEET 1 AA2 6 SER L 10 THR L 14 0 SHEET 2 AA2 6 THR L 102 LYS L 107 1 O LYS L 107 N VAL L 13 SHEET 3 AA2 6 GLY L 84 GLN L 90 -1 N GLY L 84 O LEU L 104 SHEET 4 AA2 6 LEU L 33 GLN L 38 -1 N GLN L 38 O VAL L 85 SHEET 5 AA2 6 PRO L 44 SER L 49 -1 O ILE L 48 N TRP L 35 SHEET 6 AA2 6 LYS L 53 LEU L 54 -1 O LYS L 53 N SER L 49 SHEET 1 AA3 4 SER L 10 THR L 14 0 SHEET 2 AA3 4 THR L 102 LYS L 107 1 O LYS L 107 N VAL L 13 SHEET 3 AA3 4 GLY L 84 GLN L 90 -1 N GLY L 84 O LEU L 104 SHEET 4 AA3 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AA4 4 SER L 114 PHE L 118 0 SHEET 2 AA4 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AA4 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 AA4 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AA5 4 ALA L 153 LEU L 154 0 SHEET 2 AA5 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AA5 4 TYR L 192 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AA5 4 VAL L 205 PHE L 209 -1 O LYS L 207 N CYS L 194 SHEET 1 AA6 4 GLN H 3 SER H 7 0 SHEET 2 AA6 4 LEU H 18 SER H 25 -1 O THR H 21 N SER H 7 SHEET 3 AA6 4 GLN H 77 LEU H 82 -1 O PHE H 78 N CYS H 22 SHEET 4 AA6 4 VAL H 67 ASP H 72 -1 N ASP H 72 O GLN H 77 SHEET 1 AA7 6 LEU H 11 VAL H 12 0 SHEET 2 AA7 6 THR H 104 VAL H 108 1 O THR H 107 N VAL H 12 SHEET 3 AA7 6 ALA H 88 ALA H 93 -1 N ALA H 88 O VAL H 106 SHEET 4 AA7 6 TYR H 33 GLN H 39 -1 N ILE H 37 O TYR H 91 SHEET 5 AA7 6 GLU H 46 ARG H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 AA7 6 THR H 57 TYR H 59 -1 O TYR H 58 N TYR H 50 SHEET 1 AA8 4 SER H 117 LEU H 121 0 SHEET 2 AA8 4 THR H 132 TYR H 142 -1 O LEU H 138 N PHE H 119 SHEET 3 AA8 4 TYR H 173 PRO H 182 -1 O LEU H 175 N VAL H 139 SHEET 4 AA8 4 VAL H 160 THR H 162 -1 N HIS H 161 O VAL H 178 SHEET 1 AA9 4 THR H 128 SER H 129 0 SHEET 2 AA9 4 THR H 132 TYR H 142 -1 O THR H 132 N SER H 129 SHEET 3 AA9 4 TYR H 173 PRO H 182 -1 O LEU H 175 N VAL H 139 SHEET 4 AA9 4 VAL H 166 LEU H 167 -1 N VAL H 166 O SER H 174 SHEET 1 AB1 3 THR H 148 TRP H 151 0 SHEET 2 AB1 3 TYR H 191 HIS H 197 -1 O ASN H 194 N SER H 150 SHEET 3 AB1 3 THR H 202 VAL H 208 -1 O THR H 202 N HIS H 197 SHEET 1 AB2 4 MET B 4 THR B 7 0 SHEET 2 AB2 4 ALA B 19 SER B 25 -1 O LYS B 24 N THR B 5 SHEET 3 AB2 4 ASP B 70 ILE B 75 -1 O LEU B 73 N ILE B 21 SHEET 4 AB2 4 PHE B 62 SER B 67 -1 N SER B 63 O LYS B 74 SHEET 1 AB3 6 SER B 10 THR B 14 0 SHEET 2 AB3 6 THR B 102 LYS B 107 1 O LYS B 103 N LEU B 11 SHEET 3 AB3 6 GLY B 84 GLN B 90 -1 N GLY B 84 O LEU B 104 SHEET 4 AB3 6 LEU B 33 GLN B 38 -1 N ASN B 34 O TRP B 89 SHEET 5 AB3 6 LYS B 45 SER B 49 -1 O ILE B 48 N TRP B 35 SHEET 6 AB3 6 LYS B 53 LEU B 54 -1 O LYS B 53 N SER B 49 SHEET 1 AB4 4 SER B 10 THR B 14 0 SHEET 2 AB4 4 THR B 102 LYS B 107 1 O LYS B 103 N LEU B 11 SHEET 3 AB4 4 GLY B 84 GLN B 90 -1 N GLY B 84 O LEU B 104 SHEET 4 AB4 4 THR B 97 PHE B 98 -1 O THR B 97 N GLN B 90 SHEET 1 AB5 4 SER B 114 PHE B 118 0 SHEET 2 AB5 4 THR B 129 PHE B 139 -1 O VAL B 133 N PHE B 118 SHEET 3 AB5 4 TYR B 173 SER B 182 -1 O LEU B 175 N LEU B 136 SHEET 4 AB5 4 SER B 159 VAL B 163 -1 N GLN B 160 O THR B 178 SHEET 1 AB6 4 ALA B 153 LEU B 154 0 SHEET 2 AB6 4 LYS B 145 VAL B 150 -1 N VAL B 150 O ALA B 153 SHEET 3 AB6 4 TYR B 192 THR B 197 -1 O GLU B 195 N GLN B 147 SHEET 4 AB6 4 VAL B 205 PHE B 209 -1 O LYS B 207 N CYS B 194 SHEET 1 AB7 4 GLN A 3 SER A 7 0 SHEET 2 AB7 4 LEU A 18 SER A 25 -1 O THR A 21 N SER A 7 SHEET 3 AB7 4 GLN A 77 LEU A 82 -1 O LEU A 80 N LEU A 20 SHEET 4 AB7 4 VAL A 67 ASP A 72 -1 N ASP A 72 O GLN A 77 SHEET 1 AB8 6 LEU A 11 VAL A 12 0 SHEET 2 AB8 6 THR A 104 VAL A 108 1 O THR A 107 N VAL A 12 SHEET 3 AB8 6 ALA A 88 SER A 94 -1 N TYR A 90 O THR A 104 SHEET 4 AB8 6 TYR A 33 GLN A 39 -1 N ILE A 37 O TYR A 91 SHEET 5 AB8 6 GLU A 46 ARG A 52 -1 O GLU A 46 N ARG A 38 SHEET 6 AB8 6 THR A 57 TYR A 59 -1 O TYR A 58 N TYR A 50 SHEET 1 AB9 4 SER A 117 LEU A 121 0 SHEET 2 AB9 4 THR A 132 TYR A 142 -1 O GLY A 136 N LEU A 121 SHEET 3 AB9 4 TYR A 173 PRO A 182 -1 O LEU A 175 N VAL A 139 SHEET 4 AB9 4 VAL A 160 THR A 162 -1 N HIS A 161 O VAL A 178 SHEET 1 AC1 4 THR A 128 SER A 129 0 SHEET 2 AC1 4 THR A 132 TYR A 142 -1 O THR A 132 N SER A 129 SHEET 3 AC1 4 TYR A 173 PRO A 182 -1 O LEU A 175 N VAL A 139 SHEET 4 AC1 4 VAL A 166 LEU A 167 -1 N VAL A 166 O SER A 174 SHEET 1 AC2 3 THR A 148 TRP A 151 0 SHEET 2 AC2 3 TYR A 191 HIS A 197 -1 O ASN A 194 N SER A 150 SHEET 3 AC2 3 THR A 202 VAL A 208 -1 O VAL A 204 N VAL A 195 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.02 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.07 SSBOND 4 CYS H 137 CYS H 193 1555 1555 2.04 SSBOND 5 CYS B 23 CYS B 88 1555 1555 2.06 SSBOND 6 CYS B 134 CYS B 194 1555 1555 2.04 SSBOND 7 CYS A 22 CYS A 92 1555 1555 2.05 SSBOND 8 CYS A 137 CYS A 193 1555 1555 2.03 LINK C ASN P 5 N ALY P 6 1555 1555 1.32 LINK C ALY P 6 N LYS P 7 1555 1555 1.33 LINK C ASN Q 5 N ALY Q 6 1555 1555 1.31 LINK C ALY Q 6 N LYS Q 7 1555 1555 1.33 CISPEP 1 THR L 7 PRO L 8 0 -8.53 CISPEP 2 PHE L 94 PRO L 95 0 -1.17 CISPEP 3 TYR L 140 PRO L 141 0 6.22 CISPEP 4 PHE H 143 PRO H 144 0 -7.24 CISPEP 5 GLU H 145 PRO H 146 0 2.38 CISPEP 6 THR B 7 PRO B 8 0 -5.94 CISPEP 7 PHE B 94 PRO B 95 0 -0.54 CISPEP 8 TYR B 140 PRO B 141 0 3.54 CISPEP 9 PHE A 143 PRO A 144 0 -7.69 CISPEP 10 GLU A 145 PRO A 146 0 0.99 CRYST1 76.599 83.862 134.371 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013055 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011924 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007442 0.00000