HEADER LIGASE 26-JUN-21 7F6W TITLE CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE LYSYL-TRNA SYNTHETASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE--TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LYSYL-TRNA SYNTHETASE; COMPND 5 EC: 6.1.1.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: SCP684_0001024300; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LYSINE-TRNA LIGASE; PROTEIN TRANSLATION ENZYME, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR S.WU,P.LI,Z.HEI,L.ZHENG,J.WANG,P.FANG REVDAT 2 29-NOV-23 7F6W 1 REMARK REVDAT 1 16-FEB-22 7F6W 0 JRNL AUTH S.WU,L.ZHENG,Z.HEI,J.B.ZHOU,G.LI,P.LI,J.WANG,H.ALI,X.L.ZHOU, JRNL AUTH 2 J.WANG,P.FANG JRNL TITL HUMAN LYSYL-TRNA SYNTHETASE EVOLVES A DYNAMIC STRUCTURE THAT JRNL TITL 2 CAN BE STABILIZED BY FORMING COMPLEX. JRNL REF CELL.MOL.LIFE SCI. V. 79 128 2022 JRNL REFN ESSN 1420-9071 JRNL PMID 35133502 JRNL DOI 10.1007/S00018-022-04158-9 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.480 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.9 REMARK 3 NUMBER OF REFLECTIONS : 37550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.4860 - 6.2081 1.00 3373 190 0.1596 0.1964 REMARK 3 2 6.2081 - 4.9589 1.00 3223 180 0.1645 0.1645 REMARK 3 3 4.9589 - 4.3413 1.00 3170 177 0.1219 0.1553 REMARK 3 4 4.3413 - 3.9486 1.00 3152 177 0.1354 0.1882 REMARK 3 5 3.9486 - 3.6679 1.00 3110 175 0.1571 0.1780 REMARK 3 6 3.6679 - 3.4532 1.00 3127 175 0.1767 0.2138 REMARK 3 7 3.4532 - 3.2812 1.00 3114 173 0.2006 0.2315 REMARK 3 8 3.2812 - 3.1391 1.00 3098 174 0.2249 0.2418 REMARK 3 9 3.1391 - 3.0188 1.00 3109 174 0.2409 0.2795 REMARK 3 10 3.0188 - 2.9150 1.00 3070 172 0.2628 0.2834 REMARK 3 11 2.9150 - 2.8242 0.67 2095 117 0.2615 0.3137 REMARK 3 12 2.8242 - 2.7438 0.36 1107 63 0.2508 0.3327 REMARK 3 13 2.7438 - 2.6717 0.20 601 34 0.2412 0.3489 REMARK 3 14 2.6717 - 2.6100 0.07 209 11 0.3007 0.4566 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 31.4037 31.4511 12.3402 REMARK 3 T TENSOR REMARK 3 T11: 0.3454 T22: 0.3244 REMARK 3 T33: 0.2460 T12: -0.1086 REMARK 3 T13: 0.0333 T23: -0.0274 REMARK 3 L TENSOR REMARK 3 L11: 1.0092 L22: 1.1214 REMARK 3 L33: 0.5683 L12: -0.5927 REMARK 3 L13: 0.0353 L23: -0.0448 REMARK 3 S TENSOR REMARK 3 S11: -0.0781 S12: -0.1799 S13: -0.0257 REMARK 3 S21: 0.1587 S22: 0.0294 S23: 0.0365 REMARK 3 S31: 0.0267 S32: -0.0335 S33: 0.0485 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7F6W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1300022994. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46870 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 48.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 12.90 REMARK 200 R MERGE FOR SHELL (I) : 2.20200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3BJU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 79.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM HEPES, PEG 500 MME, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 119.56500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 55.55000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 55.55000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.78250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 55.55000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 55.55000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 179.34750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 55.55000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.55000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 59.78250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 55.55000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.55000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 179.34750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 119.56500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 65 REMARK 465 ALA A 66 REMARK 465 ASP A 67 REMARK 465 LEU A 68 REMARK 465 ASP A 219 REMARK 465 HIS A 220 REMARK 465 PHE A 221 REMARK 465 GLY A 222 REMARK 465 ASP A 579 REMARK 465 VAL A 580 REMARK 465 LEU A 581 REMARK 465 GLU A 582 REMARK 465 HIS A 583 REMARK 465 HIS A 584 REMARK 465 HIS A 585 REMARK 465 HIS A 586 REMARK 465 HIS A 587 REMARK 465 HIS A 588 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 83 CG CD OE1 OE2 REMARK 470 LYS A 114 CD CE NZ REMARK 470 LYS A 115 CD CE NZ REMARK 470 GLU A 121 CG CD OE1 OE2 REMARK 470 LYS A 169 CD CE NZ REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 GLU A 196 CG CD OE1 OE2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 LYS A 241 CD CE NZ REMARK 470 ASP A 242 CG OD1 OD2 REMARK 470 LYS A 284 CG CD CE NZ REMARK 470 LYS A 411 CD CE NZ REMARK 470 GLU A 422 CG CD OE1 OE2 REMARK 470 LYS A 428 CE NZ REMARK 470 LYS A 429 CG CD CE NZ REMARK 470 ASP A 527 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 91 79.18 54.03 REMARK 500 ASP A 163 72.64 58.94 REMARK 500 GLU A 196 -7.83 74.05 REMARK 500 ASN A 240 -61.48 -100.97 REMARK 500 LYS A 241 -16.02 77.10 REMARK 500 ALA A 302 149.08 -172.10 REMARK 500 PRO A 413 170.70 -58.30 REMARK 500 LEU A 442 56.66 -92.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1005 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A1006 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A1007 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH A1008 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH A1009 DISTANCE = 8.68 ANGSTROMS DBREF1 7F6W A 66 581 UNP A0A6V8RZ07_YEASX DBREF2 7F6W A A0A6V8RZ07 66 581 SEQADV 7F6W MET A 65 UNP A0A6V8RZ0 INITIATING METHIONINE SEQADV 7F6W GLU A 582 UNP A0A6V8RZ0 EXPRESSION TAG SEQADV 7F6W HIS A 583 UNP A0A6V8RZ0 EXPRESSION TAG SEQADV 7F6W HIS A 584 UNP A0A6V8RZ0 EXPRESSION TAG SEQADV 7F6W HIS A 585 UNP A0A6V8RZ0 EXPRESSION TAG SEQADV 7F6W HIS A 586 UNP A0A6V8RZ0 EXPRESSION TAG SEQADV 7F6W HIS A 587 UNP A0A6V8RZ0 EXPRESSION TAG SEQADV 7F6W HIS A 588 UNP A0A6V8RZ0 EXPRESSION TAG SEQRES 1 A 524 MET ALA ASP LEU ASP PRO SER GLN TYR PHE GLU THR ARG SEQRES 2 A 524 SER ARG GLN ILE GLN GLU LEU ARG LYS THR HIS GLU PRO SEQRES 3 A 524 ASN PRO TYR PRO HIS LYS PHE HIS VAL SER ILE SER ASN SEQRES 4 A 524 PRO GLU PHE LEU ALA LYS TYR ALA HIS LEU LYS LYS GLY SEQRES 5 A 524 GLU THR LEU PRO GLU GLU LYS VAL SER ILE ALA GLY ARG SEQRES 6 A 524 ILE HIS ALA LYS ARG GLU SER GLY SER LYS LEU LYS PHE SEQRES 7 A 524 TYR VAL LEU HIS GLY ASP GLY VAL GLU VAL GLN LEU MET SEQRES 8 A 524 SER GLN LEU GLN ASP TYR CYS ASP PRO ASP SER TYR GLU SEQRES 9 A 524 LYS ASP HIS ASP LEU LEU LYS ARG GLY ASP ILE VAL GLY SEQRES 10 A 524 VAL GLU GLY TYR VAL GLY ARG THR GLN PRO LYS LYS GLY SEQRES 11 A 524 GLY GLU GLY GLU VAL SER VAL PHE VAL SER ARG VAL GLN SEQRES 12 A 524 LEU LEU THR PRO CYS LEU HIS MET LEU PRO ALA ASP HIS SEQRES 13 A 524 PHE GLY PHE LYS ASP GLN GLU THR ARG TYR ARG LYS ARG SEQRES 14 A 524 TYR LEU ASP LEU ILE MET ASN LYS ASP ALA ARG ASN ARG SEQRES 15 A 524 PHE ILE THR ARG SER GLU ILE ILE ARG TYR ILE ARG ARG SEQRES 16 A 524 PHE LEU ASP GLN ARG LYS PHE ILE GLU VAL GLU THR PRO SEQRES 17 A 524 MET MET ASN VAL ILE ALA GLY GLY ALA THR ALA LYS PRO SEQRES 18 A 524 PHE ILE THR HIS HIS ASN ASP LEU ASP MET ASP MET TYR SEQRES 19 A 524 MET ARG ILE ALA PRO GLU LEU PHE LEU LYS GLN LEU VAL SEQRES 20 A 524 VAL GLY GLY LEU ASP ARG VAL TYR GLU ILE GLY ARG GLN SEQRES 21 A 524 PHE ARG ASN GLU GLY ILE ASP MET THR HIS ASN PRO GLU SEQRES 22 A 524 PHE THR THR CYS GLU PHE TYR GLN ALA TYR ALA ASP VAL SEQRES 23 A 524 TYR ASP LEU MET ASP MET THR GLU LEU MET PHE SER GLU SEQRES 24 A 524 MET VAL LYS GLU ILE THR GLY SER TYR ILE ILE LYS TYR SEQRES 25 A 524 HIS PRO ASP PRO ALA ASP PRO ALA LYS GLU LEU GLU LEU SEQRES 26 A 524 ASN PHE SER ARG PRO TRP LYS ARG ILE ASN MET ILE GLU SEQRES 27 A 524 GLU LEU GLU LYS VAL PHE ASN VAL LYS PHE PRO SER GLY SEQRES 28 A 524 ASP GLN LEU HIS THR ALA GLU THR GLY GLU PHE LEU LYS SEQRES 29 A 524 LYS ILE LEU VAL ASP ASN LYS LEU GLU CYS PRO PRO PRO SEQRES 30 A 524 LEU THR ASN ALA ARG MET LEU ASP LYS LEU VAL GLY GLU SEQRES 31 A 524 LEU GLU ASP THR CYS ILE ASN PRO THR PHE ILE PHE GLY SEQRES 32 A 524 HIS PRO GLN MET MET SER PRO LEU ALA LYS TYR SER ARG SEQRES 33 A 524 ASP GLN PRO GLY LEU CYS GLU ARG PHE GLU VAL PHE VAL SEQRES 34 A 524 ALA THR LYS GLU ILE CYS ASN ALA TYR THR GLU LEU ASN SEQRES 35 A 524 ASP PRO PHE ASP GLN ARG ALA ARG PHE GLU GLU GLN ALA SEQRES 36 A 524 ARG GLN LYS ASP GLN GLY ASP ASP GLU ALA GLN LEU VAL SEQRES 37 A 524 ASP GLU THR PHE CYS ASN ALA LEU GLU TYR GLY LEU PRO SEQRES 38 A 524 PRO THR GLY GLY TRP GLY CYS GLY ILE ASP ARG LEU ALA SEQRES 39 A 524 MET PHE LEU THR ASP SER ASN THR ILE ARG GLU VAL LEU SEQRES 40 A 524 LEU PHE PRO THR LEU LYS PRO ASP VAL LEU GLU HIS HIS SEQRES 41 A 524 HIS HIS HIS HIS HET KAA A 601 32 HET PG6 A 602 18 HETNAM KAA 5'-O-[(L-LYSYLAMINO)SULFONYL]ADENOSINE HETNAM PG6 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]- HETNAM 2 PG6 ETHOXY}-ETHANE HETSYN KAA 5'-O-[N-(L-LYSYL)SULFAMOYL]ADENOSINE FORMUL 2 KAA C16 H26 N8 O7 S FORMUL 3 PG6 C12 H26 O6 FORMUL 4 HOH *309(H2 O) HELIX 1 AA1 ASP A 69 HIS A 88 1 20 HELIX 2 AA2 SER A 102 TYR A 110 1 9 HELIX 3 AA3 GLN A 159 TYR A 161 5 3 HELIX 4 AA4 ASP A 163 ASP A 165 5 3 HELIX 5 AA5 SER A 166 LEU A 173 1 8 HELIX 6 AA6 GLN A 226 LYS A 232 1 7 HELIX 7 AA7 LYS A 232 ASN A 240 1 9 HELIX 8 AA8 LYS A 241 GLN A 263 1 23 HELIX 9 AA9 PRO A 303 GLY A 314 1 12 HELIX 10 AB1 ASP A 349 GLY A 370 1 22 HELIX 11 AB2 MET A 400 ASN A 409 1 10 HELIX 12 AB3 THR A 420 ASN A 434 1 15 HELIX 13 AB4 THR A 443 ASP A 457 1 15 HELIX 14 AB5 PRO A 469 SER A 473 5 5 HELIX 15 AB6 ASP A 507 GLN A 524 1 18 HELIX 16 AB7 ASP A 533 LEU A 544 1 12 HELIX 17 AB8 ILE A 554 THR A 562 1 9 HELIX 18 AB9 THR A 566 VAL A 570 5 5 SHEET 1 AA1 6 THR A 118 SER A 136 0 SHEET 2 AA1 6 LEU A 140 GLY A 147 -1 O PHE A 142 N ARG A 134 SHEET 3 AA1 6 VAL A 150 GLN A 157 -1 O VAL A 152 N LEU A 145 SHEET 4 AA1 6 VAL A 199 THR A 210 1 O VAL A 203 N MET A 155 SHEET 5 AA1 6 ILE A 179 ARG A 188 -1 N TYR A 185 O PHE A 202 SHEET 6 AA1 6 THR A 118 SER A 136 -1 N VAL A 124 O GLY A 184 SHEET 1 AA2 8 ILE A 267 GLU A 268 0 SHEET 2 AA2 8 ARG A 317 PHE A 325 1 O ARG A 317 N ILE A 267 SHEET 3 AA2 8 GLU A 337 ALA A 346 -1 O PHE A 338 N GLN A 324 SHEET 4 AA2 8 THR A 547 GLY A 553 -1 O GLY A 548 N GLN A 345 SHEET 5 AA2 8 LYS A 496 THR A 503 -1 N ASN A 500 O GLY A 551 SHEET 6 AA2 8 ARG A 488 VAL A 493 -1 N VAL A 493 O LYS A 496 SHEET 7 AA2 8 THR A 463 PHE A 466 -1 N ILE A 465 O GLU A 490 SHEET 8 AA2 8 LYS A 396 ASN A 399 1 N LYS A 396 O PHE A 464 SHEET 1 AA3 3 MET A 274 ASN A 275 0 SHEET 2 AA3 3 MET A 295 MET A 299 -1 O TYR A 298 N ASN A 275 SHEET 3 AA3 3 ILE A 287 HIS A 290 -1 N HIS A 290 O MET A 295 SHEET 1 AA4 2 ILE A 373 TYR A 376 0 SHEET 2 AA4 2 LEU A 387 ASN A 390 -1 O LEU A 387 N TYR A 376 CISPEP 1 ARG A 393 PRO A 394 0 0.46 CISPEP 2 PRO A 440 PRO A 441 0 -1.36 CRYST1 111.100 111.100 239.130 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009001 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009001 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004182 0.00000