HEADER CELL ADHESION 30-JUN-21 7F7Y TITLE CRYSTAL STRUCTURE OF PROTEIN PITB FROM PILUS ISLET-2 OF STREPTOCOCCUS TITLE 2 PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PITB; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 GENE: PITB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACKBONE PILIN, ADHESIN, PITB; PI-2 PILUS; STREPTOCOCCUS PNEUMONIAE, KEYWDS 2 ISOPEPTIDE, CNAB FOLD, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR R.K.YADAV,V.KRISHNAN REVDAT 4 29-NOV-23 7F7Y 1 REMARK REVDAT 3 26-OCT-22 7F7Y 1 JRNL REVDAT 2 08-JUN-22 7F7Y 1 JRNL REVDAT 1 01-JUN-22 7F7Y 0 JRNL AUTH R.K.YADAV,V.KRISHNAN JRNL TITL NEW STRUCTURAL INSIGHTS INTO THE PI-2 PILUS FROM JRNL TITL 2 STREPTOCOCCUS ORALIS, AN EARLY DENTAL PLAQUE COLONIZER. JRNL REF FEBS J. V. 289 6342 2022 JRNL REFN ISSN 1742-464X JRNL PMID 35561142 JRNL DOI 10.1111/FEBS.16527 REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 81.8 REMARK 3 NUMBER OF REFLECTIONS : 48546 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2521 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.13 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2560 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 123 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5106 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 514 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.214 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.186 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.414 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5208 ; 0.016 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4814 ; 0.018 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7064 ; 1.833 ; 1.660 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11164 ; 1.673 ; 1.589 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 662 ; 7.317 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 242 ;39.154 ;26.033 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 890 ;14.477 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;23.548 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 738 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5974 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1090 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2654 ; 1.668 ; 1.368 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2653 ; 1.668 ; 1.367 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3314 ; 2.798 ; 2.040 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3315 ; 2.797 ; 2.041 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2554 ; 2.145 ; 1.579 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2552 ; 2.145 ; 1.577 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3750 ; 3.602 ; 2.254 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 83834 ; 7.002 ;45.987 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 83503 ; 6.990 ;46.050 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 48 A 222 REMARK 3 ORIGIN FOR THE GROUP (A): -11.1258 -13.2897 1.1225 REMARK 3 T TENSOR REMARK 3 T11: 0.0221 T22: 0.0269 REMARK 3 T33: 0.0121 T12: 0.0038 REMARK 3 T13: -0.0038 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.0048 L22: 0.0200 REMARK 3 L33: 0.3270 L12: -0.0068 REMARK 3 L13: 0.0300 L23: -0.0638 REMARK 3 S TENSOR REMARK 3 S11: -0.0000 S12: -0.0004 S13: 0.0023 REMARK 3 S21: -0.0021 S22: 0.0141 S23: 0.0057 REMARK 3 S31: 0.0235 S32: 0.0098 S33: -0.0141 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 223 A 379 REMARK 3 ORIGIN FOR THE GROUP (A): -17.1183 -11.3073 -40.4273 REMARK 3 T TENSOR REMARK 3 T11: 0.0127 T22: 0.0317 REMARK 3 T33: 0.0144 T12: -0.0139 REMARK 3 T13: -0.0060 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.0014 L22: 0.0351 REMARK 3 L33: 0.2456 L12: 0.0059 REMARK 3 L13: -0.0047 L23: 0.0116 REMARK 3 S TENSOR REMARK 3 S11: 0.0034 S12: -0.0002 S13: 0.0002 REMARK 3 S21: -0.0010 S22: 0.0111 S23: 0.0051 REMARK 3 S31: 0.0079 S32: 0.0057 S33: -0.0145 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 48 B 222 REMARK 3 ORIGIN FOR THE GROUP (A): -50.0609 -13.5995 -91.6096 REMARK 3 T TENSOR REMARK 3 T11: 0.0312 T22: 0.0150 REMARK 3 T33: 0.0129 T12: 0.0018 REMARK 3 T13: -0.0020 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.0306 L22: 0.0072 REMARK 3 L33: 0.3898 L12: -0.0119 REMARK 3 L13: 0.0978 L23: -0.0428 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: -0.0064 S13: -0.0041 REMARK 3 S21: -0.0004 S22: 0.0019 S23: -0.0032 REMARK 3 S31: -0.0073 S32: -0.0297 S33: -0.0157 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 223 B 379 REMARK 3 ORIGIN FOR THE GROUP (A): -47.1153 -20.6869 -50.1864 REMARK 3 T TENSOR REMARK 3 T11: 0.0356 T22: 0.0139 REMARK 3 T33: 0.0088 T12: -0.0155 REMARK 3 T13: -0.0034 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.0091 L22: 0.0186 REMARK 3 L33: 0.3213 L12: 0.0128 REMARK 3 L13: -0.0535 L23: -0.0742 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: 0.0024 S13: -0.0002 REMARK 3 S21: 0.0030 S22: 0.0029 S23: -0.0020 REMARK 3 S31: -0.0153 S32: -0.0233 S33: -0.0066 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7F7Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1300022984. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979235 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52716 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.128 REMARK 200 RESOLUTION RANGE LOW (A) : 54.983 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4S3L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, LITHIUM SULPHATE, TRIS PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 181.09650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 181.09650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.74500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.32950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.74500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.32950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 181.09650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.74500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.32950 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 181.09650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.74500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.32950 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2524 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 217 ND2 REMARK 470 ASN A 375 ND2 REMARK 470 ASN B 217 ND2 REMARK 470 ASN B 375 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 66 CG ASN A 217 1.24 REMARK 500 NZ LYS B 246 CG ASN B 375 1.27 REMARK 500 NZ LYS B 66 CG ASN B 217 1.28 REMARK 500 NZ LYS A 246 CG ASN A 375 1.38 REMARK 500 NZ LYS B 246 OD1 ASN B 375 1.92 REMARK 500 N GLY A 333 O3 SO4 A 2202 2.02 REMARK 500 NZ LYS A 246 OD1 ASN A 375 2.05 REMARK 500 NZ LYS A 66 OD1 ASN A 217 2.10 REMARK 500 NZ LYS B 66 OD1 ASN B 217 2.14 REMARK 500 OD1 ASP B 336 OD1 ASN B 375 2.18 REMARK 500 OD1 ASP A 336 OD1 ASN A 375 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 149 40.01 -100.62 REMARK 500 GLN A 209 109.25 -39.75 REMARK 500 GLU A 226 71.69 -119.86 REMARK 500 ASP A 231 89.97 -155.51 REMARK 500 LYS B 149 36.40 -96.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 903 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 80 O REMARK 620 2 THR B 82 OG1 114.3 REMARK 620 3 THR B 150 O 56.1 139.5 REMARK 620 4 THR B 150 OG1 121.9 103.2 66.4 REMARK 620 5 HOH B1044 O 64.0 92.2 47.4 72.1 REMARK 620 6 HOH B1060 O 109.7 98.4 122.1 106.6 169.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 904 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS B 240 O REMARK 620 2 ASN B 369 O 129.4 REMARK 620 3 HOH B1186 O 109.9 84.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 902 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 336 OD2 REMARK 620 2 VAL B 355 O 156.1 REMARK 620 3 HOH B1120 O 100.5 102.8 REMARK 620 N 1 2 DBREF 7F7Y A 48 379 UNP B3FNT1 B3FNT1_STREE 48 379 DBREF 7F7Y B 48 379 UNP B3FNT1 B3FNT1_STREE 48 379 SEQRES 1 A 332 ASN SER ALA ILE THR LYS ALA ASN GLY GLU ASN ASN ALA SEQRES 2 A 332 VAL VAL LYS ILE ASN LYS THR LEU ASN ILE ALA GLU GLY SEQRES 3 A 332 ILE THR THR PRO THR ALA THR PHE THR PHE LYS PHE THR SEQRES 4 A 332 GLU LYS THR GLY GLN SER SER ASN GLY ALA PRO TYR GLN SEQRES 5 A 332 THR GLY VAL ALA ILE PRO ASP ARG ASN VAL GLU TYR ASN SEQRES 6 A 332 LYS ASN ASP HIS PRO THR ALA ASP LYS ILE GLN LYS ALA SEQRES 7 A 332 THR GLU ASP ILE PHE SER GLY VAL ALA TYR GLY HIS ALA SEQRES 8 A 332 GLY GLU TYR VAL TYR ASP VAL ALA GLU ALA LYS THR GLY SEQRES 9 A 332 TRP GLN ALA ILE THR LYS ASN GLY LYS THR ILE ASP ALA SEQRES 10 A 332 MET ARG TYR ASP LYS ARG THR TYR GLU MET HIS VAL ILE SEQRES 11 A 332 VAL LYS ASN LYS VAL ASN GLY GLY VAL TYR ILE SER SER SEQRES 12 A 332 VAL TYR PHE LYS GLU ASN ASN LYS SER ASN ALA PRO LYS SEQRES 13 A 332 VAL GLU SER SER GLU GLN GLY VAL TYR ASN LEU PHE ASP SEQRES 14 A 332 ASN THR TYR THR LYS ASP ALA SER LYS GLU PRO ASN PRO SEQRES 15 A 332 ASP ASP PRO SER GLN VAL ASP PRO ASN ALA LYS ALA LEU SEQRES 16 A 332 THR ILE THR LYS LYS VAL ASP GLY ALA SER GLY ASP LYS SEQRES 17 A 332 THR ARG ASP PHE GLN PHE HIS ILE LYS ILE GLN LEU PRO SEQRES 18 A 332 SER THR ASN LYS THR ALA GLU THR PRO VAL THR ASN ILE SEQRES 19 A 332 ILE VAL LYS HIS GLY SER LYS SER GLU VAL LEU ALA VAL SEQRES 20 A 332 VAL THR PRO ALA ASP THR VAL GLU TYR ASN PHE THR LEU SEQRES 21 A 332 LYS ASP GLY GLU THR PHE THR VAL GLU GLN LEU PRO ALA SEQRES 22 A 332 GLY SER LYS TYR THR VAL THR GLU THR GLY VAL ALA GLY SEQRES 23 A 332 TYR THR ASP SER SER ILE TYR THR THR ASN GLY ALA GLU SEQRES 24 A 332 GLN THR SER GLN GLY GLN LYS ASN VAL ASP PHE THR LEU SEQRES 25 A 332 THR ASP ILE LEU ILE GLY GLU LYS LYS ASN ASP ASN LYS SEQRES 26 A 332 VAL THR ASN LYS ILE ASP ASP SEQRES 1 B 332 ASN SER ALA ILE THR LYS ALA ASN GLY GLU ASN ASN ALA SEQRES 2 B 332 VAL VAL LYS ILE ASN LYS THR LEU ASN ILE ALA GLU GLY SEQRES 3 B 332 ILE THR THR PRO THR ALA THR PHE THR PHE LYS PHE THR SEQRES 4 B 332 GLU LYS THR GLY GLN SER SER ASN GLY ALA PRO TYR GLN SEQRES 5 B 332 THR GLY VAL ALA ILE PRO ASP ARG ASN VAL GLU TYR ASN SEQRES 6 B 332 LYS ASN ASP HIS PRO THR ALA ASP LYS ILE GLN LYS ALA SEQRES 7 B 332 THR GLU ASP ILE PHE SER GLY VAL ALA TYR GLY HIS ALA SEQRES 8 B 332 GLY GLU TYR VAL TYR ASP VAL ALA GLU ALA LYS THR GLY SEQRES 9 B 332 TRP GLN ALA ILE THR LYS ASN GLY LYS THR ILE ASP ALA SEQRES 10 B 332 MET ARG TYR ASP LYS ARG THR TYR GLU MET HIS VAL ILE SEQRES 11 B 332 VAL LYS ASN LYS VAL ASN GLY GLY VAL TYR ILE SER SER SEQRES 12 B 332 VAL TYR PHE LYS GLU ASN ASN LYS SER ASN ALA PRO LYS SEQRES 13 B 332 VAL GLU SER SER GLU GLN GLY VAL TYR ASN LEU PHE ASP SEQRES 14 B 332 ASN THR TYR THR LYS ASP ALA SER LYS GLU PRO ASN PRO SEQRES 15 B 332 ASP ASP PRO SER GLN VAL ASP PRO ASN ALA LYS ALA LEU SEQRES 16 B 332 THR ILE THR LYS LYS VAL ASP GLY ALA SER GLY ASP LYS SEQRES 17 B 332 THR ARG ASP PHE GLN PHE HIS ILE LYS ILE GLN LEU PRO SEQRES 18 B 332 SER THR ASN LYS THR ALA GLU THR PRO VAL THR ASN ILE SEQRES 19 B 332 ILE VAL LYS HIS GLY SER LYS SER GLU VAL LEU ALA VAL SEQRES 20 B 332 VAL THR PRO ALA ASP THR VAL GLU TYR ASN PHE THR LEU SEQRES 21 B 332 LYS ASP GLY GLU THR PHE THR VAL GLU GLN LEU PRO ALA SEQRES 22 B 332 GLY SER LYS TYR THR VAL THR GLU THR GLY VAL ALA GLY SEQRES 23 B 332 TYR THR ASP SER SER ILE TYR THR THR ASN GLY ALA GLU SEQRES 24 B 332 GLN THR SER GLN GLY GLN LYS ASN VAL ASP PHE THR LEU SEQRES 25 B 332 THR ASP ILE LEU ILE GLY GLU LYS LYS ASN ASP ASN LYS SEQRES 26 B 332 VAL THR ASN LYS ILE ASP ASP HET IOD A2201 1 HET SO4 A2202 5 HET SO4 A2203 5 HET IOD A2204 1 HET IOD A2205 1 HET IOD A2206 1 HET IOD A2207 1 HET IOD A2208 1 HET IOD B 901 1 HET K B 902 1 HET K B 903 1 HET K B 904 1 HET IOD B 905 1 HET IOD B 906 1 HETNAM IOD IODIDE ION HETNAM SO4 SULFATE ION HETNAM K POTASSIUM ION FORMUL 3 IOD 9(I 1-) FORMUL 4 SO4 2(O4 S 2-) FORMUL 12 K 3(K 1+) FORMUL 17 HOH *514(H2 O) HELIX 1 AA1 PRO A 268 ALA A 274 5 7 HELIX 2 AA2 PRO B 268 LYS B 272 5 5 SHEET 1 AA1 6 THR A 52 LYS A 53 0 SHEET 2 AA1 6 VAL A 186 GLU A 195 -1 O VAL A 191 N THR A 52 SHEET 3 AA1 6 TYR A 172 ASN A 180 -1 N GLU A 173 O LYS A 194 SHEET 4 AA1 6 GLY A 139 GLU A 147 -1 N TYR A 143 O MET A 174 SHEET 5 AA1 6 ALA A 79 GLU A 87 -1 N THR A 86 O ASP A 144 SHEET 6 AA1 6 ARG A 107 TYR A 111 -1 O TYR A 111 N ALA A 79 SHEET 1 AA2 4 LYS A 121 ALA A 125 0 SHEET 2 AA2 4 LYS A 63 ASN A 69 -1 N LYS A 66 O LYS A 124 SHEET 3 AA2 4 VAL A 211 LYS A 221 1 O ASN A 217 N ASN A 69 SHEET 4 AA2 4 ASP A 163 ARG A 166 -1 N ARG A 166 O THR A 218 SHEET 1 AA3 2 THR A 156 LYS A 157 0 SHEET 2 AA3 2 LYS A 160 THR A 161 -1 O LYS A 160 N LYS A 157 SHEET 1 AA4 7 LYS A 288 ALA A 293 0 SHEET 2 AA4 7 ASN A 280 HIS A 285 -1 N VAL A 283 O GLU A 290 SHEET 3 AA4 7 THR A 312 VAL A 315 -1 O THR A 314 N LYS A 284 SHEET 4 AA4 7 LEU A 242 ASP A 249 -1 N ILE A 244 O PHE A 313 SHEET 5 AA4 7 ASP A 370 LYS A 376 1 O VAL A 373 N THR A 245 SHEET 6 AA4 7 THR A 335 THR A 342 -1 N SER A 337 O THR A 374 SHEET 7 AA4 7 ALA A 345 GLN A 350 -1 O GLN A 347 N TYR A 340 SHEET 1 AA5 4 THR A 300 LEU A 307 0 SHEET 2 AA5 4 PHE A 259 GLN A 266 -1 N PHE A 261 O PHE A 305 SHEET 3 AA5 4 SER A 322 GLU A 328 -1 O LYS A 323 N GLN A 266 SHEET 4 AA5 4 PHE A 357 ILE A 364 -1 O ILE A 362 N TYR A 324 SHEET 1 AA6 6 THR B 52 LYS B 53 0 SHEET 2 AA6 6 VAL B 186 GLU B 195 -1 O VAL B 191 N THR B 52 SHEET 3 AA6 6 TYR B 172 ASN B 180 -1 N ILE B 177 O SER B 190 SHEET 4 AA6 6 GLY B 139 GLU B 147 -1 N TYR B 143 O MET B 174 SHEET 5 AA6 6 ALA B 79 LYS B 88 -1 N LYS B 84 O ALA B 146 SHEET 6 AA6 6 ARG B 107 TYR B 111 -1 O TYR B 111 N ALA B 79 SHEET 1 AA7 4 LYS B 121 ALA B 125 0 SHEET 2 AA7 4 LYS B 63 ASN B 69 -1 N LYS B 66 O LYS B 124 SHEET 3 AA7 4 VAL B 211 LYS B 221 1 O ASN B 217 N ASN B 69 SHEET 4 AA7 4 ASP B 163 ARG B 166 -1 N ALA B 164 O THR B 220 SHEET 1 AA8 2 THR B 156 LYS B 157 0 SHEET 2 AA8 2 LYS B 160 THR B 161 -1 O LYS B 160 N LYS B 157 SHEET 1 AA9 7 LYS B 288 ALA B 293 0 SHEET 2 AA9 7 ASN B 280 HIS B 285 -1 N VAL B 283 O GLU B 290 SHEET 3 AA9 7 THR B 312 VAL B 315 -1 O THR B 314 N LYS B 284 SHEET 4 AA9 7 LEU B 242 ASP B 249 -1 N LEU B 242 O VAL B 315 SHEET 5 AA9 7 ASP B 370 LYS B 376 1 O ASN B 371 N THR B 245 SHEET 6 AA9 7 THR B 335 THR B 342 -1 N SER B 337 O THR B 374 SHEET 7 AA9 7 ALA B 345 LYS B 353 -1 O GLN B 347 N TYR B 340 SHEET 1 AB1 4 THR B 300 LEU B 307 0 SHEET 2 AB1 4 PHE B 259 GLN B 266 -1 N PHE B 261 O PHE B 305 SHEET 3 AB1 4 SER B 322 GLU B 328 -1 O LYS B 323 N GLN B 266 SHEET 4 AB1 4 PHE B 357 ILE B 364 -1 O ILE B 364 N SER B 322 LINK O THR B 80 K K B 903 1555 1555 2.92 LINK OG1 THR B 82 K K B 903 1555 1555 2.60 LINK O THR B 150 K K B 903 1555 1555 3.23 LINK OG1 THR B 150 K K B 903 1555 1555 2.87 LINK O LYS B 240 K K B 904 1555 1555 2.74 LINK OD2 ASP B 336 K K B 902 1555 1555 2.62 LINK O VAL B 355 K K B 902 1555 1555 2.73 LINK O ASN B 369 K K B 904 1555 1555 2.83 LINK K K B 902 O HOH B1120 1555 1555 2.77 LINK K K B 903 O HOH B1044 1555 1555 3.40 LINK K K B 903 O HOH B1060 1555 3454 2.67 LINK K K B 904 O HOH B1186 1555 1555 2.46 CISPEP 1 THR A 296 PRO A 297 0 0.56 CISPEP 2 THR B 296 PRO B 297 0 -2.96 CRYST1 73.490 82.659 362.193 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013607 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012098 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002761 0.00000