HEADER METAL TRANSPORT 23-JUL-21 7FFM TITLE HUMAN SERUM TRANSFERRIN WITH FIVE OSMIUM BINDING SITES COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEROTRANSFERRIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRANSFERRIN,BETA-1 METAL-BINDING GLOBULIN,SIDEROPHILIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS TRANSFERRIN, OSMIUM, TITANIUM, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR M.WANG,H.SUN REVDAT 3 29-NOV-23 7FFM 1 REMARK REVDAT 2 15-NOV-23 7FFM 1 LINK ATOM REVDAT 1 22-JUN-22 7FFM 0 JRNL AUTH M.WANG,H.WANG,X.XU,T.P.LAI,Y.ZHOU,Q.HAO,H.LI,H.SUN JRNL TITL BINDING OF RUTHENIUM AND OSMIUM AT NON‐IRON SITES OF JRNL TITL 2 TRANSFERRIN ACCOUNTS FOR THEIR IRON-INDEPENDENT CELLULAR JRNL TITL 3 UPTAKE. JRNL REF J.INORG.BIOCHEM. V. 234 11885 2022 JRNL REFN ISSN 0162-0134 JRNL PMID 35690040 JRNL DOI 10.1016/J.JINORGBIO.2022.111885 REMARK 2 REMARK 2 RESOLUTION. 3.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260:000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 22374 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 1156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7700 - 6.1161 1.00 2788 147 0.2056 0.2407 REMARK 3 2 6.1161 - 4.8562 1.00 2678 156 0.1888 0.2069 REMARK 3 3 4.8562 - 4.2428 1.00 2666 146 0.1478 0.1782 REMARK 3 4 4.2428 - 3.8551 1.00 2640 132 0.1487 0.1801 REMARK 3 5 3.8551 - 3.5789 1.00 2626 156 0.1628 0.1922 REMARK 3 6 3.5789 - 3.3679 1.00 2636 137 0.1818 0.2218 REMARK 3 7 3.3679 - 3.1993 1.00 2641 139 0.1917 0.2329 REMARK 3 8 3.1993 - 3.0601 0.98 2543 143 0.2253 0.2607 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3946 -10.3907 -13.1841 REMARK 3 T TENSOR REMARK 3 T11: 0.5053 T22: 0.1562 REMARK 3 T33: 0.0717 T12: 0.0722 REMARK 3 T13: 0.0099 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 2.0045 L22: 0.6338 REMARK 3 L33: 2.9728 L12: 0.3606 REMARK 3 L13: -0.4273 L23: -0.0185 REMARK 3 S TENSOR REMARK 3 S11: 0.0125 S12: 0.2684 S13: -0.0675 REMARK 3 S21: -0.1330 S22: -0.0265 S23: -0.0510 REMARK 3 S31: 0.0721 S32: -0.0495 S33: -0.0413 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 259 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5064 -18.4583 16.6155 REMARK 3 T TENSOR REMARK 3 T11: 0.5511 T22: 0.2083 REMARK 3 T33: 0.1036 T12: -0.0854 REMARK 3 T13: -0.0528 T23: 0.0617 REMARK 3 L TENSOR REMARK 3 L11: 0.5575 L22: 0.6816 REMARK 3 L33: 2.4665 L12: 0.1481 REMARK 3 L13: -0.1405 L23: -0.6479 REMARK 3 S TENSOR REMARK 3 S11: 0.1147 S12: -0.1551 S13: -0.1472 REMARK 3 S21: 0.1908 S22: -0.1989 S23: -0.1229 REMARK 3 S31: 0.3173 S32: 0.2158 S33: -0.0169 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 260 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0185 -14.8301 -15.6619 REMARK 3 T TENSOR REMARK 3 T11: 0.5820 T22: 0.1525 REMARK 3 T33: 0.1616 T12: 0.1389 REMARK 3 T13: 0.0192 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 4.9815 L22: 4.9590 REMARK 3 L33: 4.6683 L12: 0.7002 REMARK 3 L13: -0.3134 L23: 1.5439 REMARK 3 S TENSOR REMARK 3 S11: -0.0753 S12: 0.1944 S13: -0.2219 REMARK 3 S21: -0.2739 S22: 0.1331 S23: -0.5835 REMARK 3 S31: -0.0233 S32: 0.4439 S33: -0.2337 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 471 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.5898 -37.6360 -3.6335 REMARK 3 T TENSOR REMARK 3 T11: 0.7190 T22: 0.3486 REMARK 3 T33: 0.2541 T12: -0.1961 REMARK 3 T13: -0.0767 T23: -0.0394 REMARK 3 L TENSOR REMARK 3 L11: 0.9078 L22: 2.5419 REMARK 3 L33: 1.0365 L12: 1.1947 REMARK 3 L13: 0.7854 L23: 1.1428 REMARK 3 S TENSOR REMARK 3 S11: 0.2998 S12: -0.1286 S13: -0.1123 REMARK 3 S21: 0.2965 S22: -0.3502 S23: 0.2924 REMARK 3 S31: 0.4898 S32: -0.5417 S33: 0.2659 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 472 THROUGH 573 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.9395 -54.7320 -16.5809 REMARK 3 T TENSOR REMARK 3 T11: 0.8061 T22: 0.3018 REMARK 3 T33: 0.2615 T12: -0.1921 REMARK 3 T13: -0.0642 T23: -0.0479 REMARK 3 L TENSOR REMARK 3 L11: 2.1925 L22: 2.1387 REMARK 3 L33: 2.9131 L12: 0.9526 REMARK 3 L13: 1.0002 L23: 1.6706 REMARK 3 S TENSOR REMARK 3 S11: 0.2170 S12: -0.0409 S13: -0.3162 REMARK 3 S21: 0.4029 S22: 0.0433 S23: -0.3037 REMARK 3 S31: 0.2124 S32: 0.0988 S33: -0.0968 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 574 THROUGH 679 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.5549 -43.7275 2.5169 REMARK 3 T TENSOR REMARK 3 T11: 1.0651 T22: 0.6378 REMARK 3 T33: 0.3563 T12: -0.3702 REMARK 3 T13: -0.0669 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 0.7247 L22: 3.1243 REMARK 3 L33: 1.3298 L12: 0.7422 REMARK 3 L13: 0.7142 L23: 1.2986 REMARK 3 S TENSOR REMARK 3 S11: 0.2771 S12: -0.4290 S13: -0.1826 REMARK 3 S21: 0.7785 S22: -0.2443 S23: 0.1145 REMARK 3 S31: 0.7114 S32: -0.4224 S33: -0.0137 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7FFM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1300023455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4-7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.14026 REMARK 200 MONOCHROMATOR : GRAPHITE FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26385 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.060 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.44300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.2 REMARK 200 STARTING MODEL: 4X1B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PIPES-NA 100MM PH 6.5, DI-SODIUM REMARK 280 MALONATE 8MM, PEG3350 17%, GLYCEROL 18%, PH 6.6, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.55100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.55100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 68.97700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 79.10550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 68.97700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 79.10550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.55100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 68.97700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 79.10550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.55100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 68.97700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 79.10550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 PRO A 2 REMARK 465 GLU A 333 REMARK 465 ALA A 334 REMARK 465 PRO A 335 REMARK 465 THR A 336 REMARK 465 ASP A 337 REMARK 465 GLU A 338 REMARK 465 LYS A 414 REMARK 465 SER A 415 REMARK 465 ASP A 416 REMARK 465 ASN A 417 REMARK 465 CYS A 418 REMARK 465 GLU A 419 REMARK 465 ASP A 420 REMARK 465 THR A 421 REMARK 465 PRO A 422 REMARK 465 GLU A 423 REMARK 465 VAL A 612 REMARK 465 THR A 613 REMARK 465 ASP A 614 REMARK 465 CYS A 615 REMARK 465 SER A 616 REMARK 465 GLY A 617 REMARK 465 ASN A 618 REMARK 465 PHE A 619 REMARK 465 CYS A 620 REMARK 465 LEU A 621 REMARK 465 PHE A 622 REMARK 465 ARG A 623 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 VAL A 363 CG1 CG2 REMARK 470 LYS A 365 CG CD CE NZ REMARK 470 GLU A 372 CG CD OE1 OE2 REMARK 470 ARG A 602 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 606 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 627 CG CD CE NZ REMARK 470 HIS A 642 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 TI 4TI A 701 O7 MLI A 702 2.02 REMARK 500 TI 4TI A 701 O9 MLI A 702 2.09 REMARK 500 OH TYR A 517 TI 4TI A 701 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 31 -179.40 -67.79 REMARK 500 SER A 125 -72.34 -69.19 REMARK 500 TRP A 128 -61.95 -144.09 REMARK 500 CYS A 179 41.32 -104.60 REMARK 500 CYS A 241 75.24 -152.60 REMARK 500 ALA A 244 144.89 -170.66 REMARK 500 LYS A 259 75.23 -104.88 REMARK 500 PHE A 285 31.16 -98.84 REMARK 500 LEU A 294 -49.63 64.18 REMARK 500 LYS A 340 -176.48 58.42 REMARK 500 LEU A 347 -81.44 -112.01 REMARK 500 THR A 457 -70.28 -54.63 REMARK 500 TRP A 460 -60.68 -149.83 REMARK 500 LYS A 527 -42.73 -137.16 REMARK 500 GLU A 573 49.64 -95.87 REMARK 500 SER A 610 33.48 -86.51 REMARK 500 THR A 626 -96.69 -85.10 REMARK 500 LYS A 627 117.05 -163.26 REMARK 500 LEU A 630 -52.62 62.35 REMARK 500 LEU A 641 -62.68 -120.70 REMARK 500 HIS A 642 -86.11 57.13 REMARK 500 ARG A 644 63.54 -102.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OS A 704 OS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 14 NE2 REMARK 620 2 HIS A 289 NE2 104.2 REMARK 620 3 NTA A 703 O9 167.4 70.6 REMARK 620 4 NTA A 703 O 86.9 162.1 95.6 REMARK 620 5 HOH A 802 O 132.4 74.7 58.3 108.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OS A 708 OS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 349 ND1 REMARK 620 2 HIS A 350 NE2 93.3 REMARK 620 3 HOH A 805 O 125.5 81.2 REMARK 620 4 HOH A 808 O 91.8 169.5 103.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OS A 705 OS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 490 NZ REMARK 620 2 GLU A 507 OE1 85.6 REMARK 620 3 HOH A 809 O 89.4 121.0 REMARK 620 4 HOH A 810 O 128.7 98.5 128.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OS A 707 OS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 578 NE2 REMARK 620 2 ARG A 581 NH2 129.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 OS A 706 OS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 811 O REMARK 620 2 HOH A 812 O 150.7 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4TI A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLI A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NTA A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OS A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OS A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OS A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OS A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OS A 708 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5X5P RELATED DB: PDB REMARK 900 RU-BOUND ANALOGUE REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE I429V MUTATION IS INHERIT FROM THE MR MODEL AND ULTIMATELY FROM REMARK 999 2HAV DBREF 7FFM A 1 679 UNP P02787 TRFE_HUMAN 20 698 SEQADV 7FFM VAL A 429 UNP P02787 ILE 448 VARIANT SEQRES 1 A 679 VAL PRO ASP LYS THR VAL ARG TRP CYS ALA VAL SER GLU SEQRES 2 A 679 HIS GLU ALA THR LYS CYS GLN SER PHE ARG ASP HIS MET SEQRES 3 A 679 LYS SER VAL ILE PRO SER ASP GLY PRO SER VAL ALA CYS SEQRES 4 A 679 VAL LYS LYS ALA SER TYR LEU ASP CYS ILE ARG ALA ILE SEQRES 5 A 679 ALA ALA ASN GLU ALA ASP ALA VAL THR LEU ASP ALA GLY SEQRES 6 A 679 LEU VAL TYR ASP ALA TYR LEU ALA PRO ASN ASN LEU LYS SEQRES 7 A 679 PRO VAL VAL ALA GLU PHE TYR GLY SER LYS GLU ASP PRO SEQRES 8 A 679 GLN THR PHE TYR TYR ALA VAL ALA VAL VAL LYS LYS ASP SEQRES 9 A 679 SER GLY PHE GLN MET ASN GLN LEU ARG GLY LYS LYS SER SEQRES 10 A 679 CYS HIS THR GLY LEU GLY ARG SER ALA GLY TRP ASN ILE SEQRES 11 A 679 PRO ILE GLY LEU LEU TYR CYS ASP LEU PRO GLU PRO ARG SEQRES 12 A 679 LYS PRO LEU GLU LYS ALA VAL ALA ASN PHE PHE SER GLY SEQRES 13 A 679 SER CYS ALA PRO CYS ALA ASP GLY THR ASP PHE PRO GLN SEQRES 14 A 679 LEU CYS GLN LEU CYS PRO GLY CYS GLY CYS SER THR LEU SEQRES 15 A 679 ASN GLN TYR PHE GLY TYR SER GLY ALA PHE LYS CYS LEU SEQRES 16 A 679 LYS ASP GLY ALA GLY ASP VAL ALA PHE VAL LYS HIS SER SEQRES 17 A 679 THR ILE PHE GLU ASN LEU ALA ASN LYS ALA ASP ARG ASP SEQRES 18 A 679 GLN TYR GLU LEU LEU CYS LEU ASP ASN THR ARG LYS PRO SEQRES 19 A 679 VAL ASP GLU TYR LYS ASP CYS HIS LEU ALA GLN VAL PRO SEQRES 20 A 679 SER HIS THR VAL VAL ALA ARG SER MET GLY GLY LYS GLU SEQRES 21 A 679 ASP LEU ILE TRP GLU LEU LEU ASN GLN ALA GLN GLU HIS SEQRES 22 A 679 PHE GLY LYS ASP LYS SER LYS GLU PHE GLN LEU PHE SER SEQRES 23 A 679 SER PRO HIS GLY LYS ASP LEU LEU PHE LYS ASP SER ALA SEQRES 24 A 679 HIS GLY PHE LEU LYS VAL PRO PRO ARG MET ASP ALA LYS SEQRES 25 A 679 MET TYR LEU GLY TYR GLU TYR VAL THR ALA ILE ARG ASN SEQRES 26 A 679 LEU ARG GLU GLY THR CYS PRO GLU ALA PRO THR ASP GLU SEQRES 27 A 679 CYS LYS PRO VAL LYS TRP CYS ALA LEU SER HIS HIS GLU SEQRES 28 A 679 ARG LEU LYS CYS ASP GLU TRP SER VAL ASN SER VAL GLY SEQRES 29 A 679 LYS ILE GLU CYS VAL SER ALA GLU THR THR GLU ASP CYS SEQRES 30 A 679 ILE ALA LYS ILE MET ASN GLY GLU ALA ASP ALA MET SER SEQRES 31 A 679 LEU ASP GLY GLY PHE VAL TYR ILE ALA GLY LYS CYS GLY SEQRES 32 A 679 LEU VAL PRO VAL LEU ALA GLU ASN TYR ASN LYS SER ASP SEQRES 33 A 679 ASN CYS GLU ASP THR PRO GLU ALA GLY TYR PHE ALA VAL SEQRES 34 A 679 ALA VAL VAL LYS LYS SER ALA SER ASP LEU THR TRP ASP SEQRES 35 A 679 ASN LEU LYS GLY LYS LYS SER CYS HIS THR ALA VAL GLY SEQRES 36 A 679 ARG THR ALA GLY TRP ASN ILE PRO MET GLY LEU LEU TYR SEQRES 37 A 679 ASN LYS ILE ASN HIS CYS ARG PHE ASP GLU PHE PHE SER SEQRES 38 A 679 GLU GLY CYS ALA PRO GLY SER LYS LYS ASP SER SER LEU SEQRES 39 A 679 CYS LYS LEU CYS MET GLY SER GLY LEU ASN LEU CYS GLU SEQRES 40 A 679 PRO ASN ASN LYS GLU GLY TYR TYR GLY TYR THR GLY ALA SEQRES 41 A 679 PHE ARG CYS LEU VAL GLU LYS GLY ASP VAL ALA PHE VAL SEQRES 42 A 679 LYS HIS GLN THR VAL PRO GLN ASN THR GLY GLY LYS ASN SEQRES 43 A 679 PRO ASP PRO TRP ALA LYS ASN LEU ASN GLU LYS ASP TYR SEQRES 44 A 679 GLU LEU LEU CYS LEU ASP GLY THR ARG LYS PRO VAL GLU SEQRES 45 A 679 GLU TYR ALA ASN CYS HIS LEU ALA ARG ALA PRO ASN HIS SEQRES 46 A 679 ALA VAL VAL THR ARG LYS ASP LYS GLU ALA CYS VAL HIS SEQRES 47 A 679 LYS ILE LEU ARG GLN GLN GLN HIS LEU PHE GLY SER ASN SEQRES 48 A 679 VAL THR ASP CYS SER GLY ASN PHE CYS LEU PHE ARG SER SEQRES 49 A 679 GLU THR LYS ASP LEU LEU PHE ARG ASP ASP THR VAL CYS SEQRES 50 A 679 LEU ALA LYS LEU HIS ASP ARG ASN THR TYR GLU LYS TYR SEQRES 51 A 679 LEU GLY GLU GLU TYR VAL LYS ALA VAL GLY ASN LEU ARG SEQRES 52 A 679 LYS CYS SER THR SER SER LEU LEU GLU ALA CYS THR PHE SEQRES 53 A 679 ARG ARG PRO HET 4TI A 701 1 HET MLI A 702 7 HET NTA A 703 13 HET OS A 704 1 HET OS A 705 1 HET OS A 706 1 HET OS A 707 1 HET OS A 708 1 HETNAM 4TI TITANIUM ION HETNAM MLI MALONATE ION HETNAM NTA NITRILOTRIACETIC ACID HETNAM OS OSMIUM ION FORMUL 2 4TI TI 4+ FORMUL 3 MLI C3 H2 O4 2- FORMUL 4 NTA C6 H9 N O6 FORMUL 5 OS 5(OS 3+) FORMUL 10 HOH *12(H2 O) HELIX 1 AA1 SER A 12 LYS A 27 1 16 HELIX 2 AA2 SER A 44 ALA A 54 1 11 HELIX 3 AA3 ASP A 63 LEU A 72 1 10 HELIX 4 AA4 GLN A 108 LEU A 112 5 5 HELIX 5 AA5 TRP A 128 TYR A 136 1 9 HELIX 6 AA6 CYS A 137 LEU A 139 5 3 HELIX 7 AA7 PRO A 145 ASN A 152 1 8 HELIX 8 AA8 PHE A 167 GLN A 172 5 6 HELIX 9 AA9 PHE A 186 ASP A 197 1 12 HELIX 10 AB1 SER A 208 LEU A 214 1 7 HELIX 11 AB2 ASN A 216 ASP A 221 1 6 HELIX 12 AB3 ASP A 236 CYS A 241 5 6 HELIX 13 AB4 LYS A 259 GLY A 275 1 17 HELIX 14 AB5 ASP A 310 GLY A 316 1 7 HELIX 15 AB6 GLY A 316 GLY A 329 1 14 HELIX 16 AB7 SER A 348 VAL A 363 1 16 HELIX 17 AB8 THR A 373 ASN A 383 1 11 HELIX 18 AB9 ASP A 392 CYS A 402 1 11 HELIX 19 AC1 TRP A 460 ASN A 472 1 13 HELIX 20 AC2 ARG A 475 PHE A 479 5 5 HELIX 21 AC3 SER A 492 LYS A 496 5 5 HELIX 22 AC4 SER A 501 LEU A 505 5 5 HELIX 23 AC5 TYR A 515 LYS A 527 1 13 HELIX 24 AC6 GLN A 536 ASN A 541 1 6 HELIX 25 AC7 ASN A 555 LYS A 557 5 3 HELIX 26 AC8 GLU A 573 CYS A 577 5 5 HELIX 27 AC9 ARG A 590 ASP A 592 5 3 HELIX 28 AD1 LYS A 593 GLY A 609 1 17 HELIX 29 AD2 LEU A 641 ASN A 645 5 5 HELIX 30 AD3 THR A 646 GLY A 652 1 7 HELIX 31 AD4 GLY A 652 ARG A 663 1 12 HELIX 32 AD5 LYS A 664 SER A 666 5 3 HELIX 33 AD6 SER A 668 ARG A 678 1 11 SHEET 1 AA1 2 THR A 5 ALA A 10 0 SHEET 2 AA1 2 SER A 36 LYS A 41 1 O ALA A 38 N TRP A 8 SHEET 1 AA2 4 VAL A 60 LEU A 62 0 SHEET 2 AA2 4 THR A 250 ARG A 254 -1 O VAL A 252 N VAL A 60 SHEET 3 AA2 4 LEU A 77 GLY A 86 -1 N VAL A 81 O VAL A 251 SHEET 4 AA2 4 PRO A 91 GLN A 92 -1 O GLN A 92 N TYR A 85 SHEET 1 AA3 4 VAL A 60 LEU A 62 0 SHEET 2 AA3 4 THR A 250 ARG A 254 -1 O VAL A 252 N VAL A 60 SHEET 3 AA3 4 LEU A 77 GLY A 86 -1 N VAL A 81 O VAL A 251 SHEET 4 AA3 4 GLY A 301 LYS A 304 -1 O LEU A 303 N ALA A 82 SHEET 1 AA4 6 GLY A 156 CYS A 158 0 SHEET 2 AA4 6 LYS A 116 HIS A 119 1 N HIS A 119 O CYS A 158 SHEET 3 AA4 6 VAL A 202 LYS A 206 1 O VAL A 202 N CYS A 118 SHEET 4 AA4 6 PHE A 94 LYS A 102 -1 N VAL A 98 O VAL A 205 SHEET 5 AA4 6 TYR A 223 CYS A 227 -1 O GLU A 224 N VAL A 101 SHEET 6 AA4 6 THR A 231 PRO A 234 -1 O THR A 231 N CYS A 227 SHEET 1 AA5 5 GLY A 156 CYS A 158 0 SHEET 2 AA5 5 LYS A 116 HIS A 119 1 N HIS A 119 O CYS A 158 SHEET 3 AA5 5 VAL A 202 LYS A 206 1 O VAL A 202 N CYS A 118 SHEET 4 AA5 5 PHE A 94 LYS A 102 -1 N VAL A 98 O VAL A 205 SHEET 5 AA5 5 ALA A 244 PRO A 247 -1 O VAL A 246 N TYR A 95 SHEET 1 AA6 2 VAL A 342 ALA A 346 0 SHEET 2 AA6 2 ILE A 366 SER A 370 1 O GLU A 367 N VAL A 342 SHEET 1 AA7 4 MET A 389 LEU A 391 0 SHEET 2 AA7 4 ALA A 586 THR A 589 -1 O ALA A 586 N LEU A 391 SHEET 3 AA7 4 VAL A 405 ASN A 411 -1 N LEU A 408 O VAL A 587 SHEET 4 AA7 4 CYS A 637 ALA A 639 -1 O ALA A 639 N ALA A 409 SHEET 1 AA8 6 GLU A 482 CYS A 484 0 SHEET 2 AA8 6 LYS A 448 HIS A 451 1 N HIS A 451 O CYS A 484 SHEET 3 AA8 6 VAL A 530 LYS A 534 1 N VAL A 530 O LYS A 448 SHEET 4 AA8 6 TYR A 426 LYS A 433 -1 N VAL A 431 O ALA A 531 SHEET 5 AA8 6 TYR A 559 LEU A 562 -1 O LEU A 562 N ALA A 430 SHEET 6 AA8 6 ARG A 568 PRO A 570 -1 O LYS A 569 N LEU A 561 SHEET 1 AA9 5 GLU A 482 CYS A 484 0 SHEET 2 AA9 5 LYS A 448 HIS A 451 1 N HIS A 451 O CYS A 484 SHEET 3 AA9 5 VAL A 530 LYS A 534 1 N VAL A 530 O LYS A 448 SHEET 4 AA9 5 TYR A 426 LYS A 433 -1 N VAL A 431 O ALA A 531 SHEET 5 AA9 5 ALA A 580 ALA A 582 -1 O ALA A 582 N TYR A 426 SSBOND 1 CYS A 9 CYS A 48 1555 1555 2.03 SSBOND 2 CYS A 19 CYS A 39 1555 1555 2.05 SSBOND 3 CYS A 118 CYS A 194 1555 1555 2.03 SSBOND 4 CYS A 137 CYS A 331 1555 1555 2.04 SSBOND 5 CYS A 158 CYS A 174 1555 1555 2.03 SSBOND 6 CYS A 161 CYS A 179 1555 1555 2.02 SSBOND 7 CYS A 171 CYS A 177 1555 1555 2.03 SSBOND 8 CYS A 227 CYS A 241 1555 1555 2.03 SSBOND 9 CYS A 339 CYS A 596 1555 1555 2.03 SSBOND 10 CYS A 345 CYS A 377 1555 1555 2.04 SSBOND 11 CYS A 355 CYS A 368 1555 1555 2.03 SSBOND 12 CYS A 402 CYS A 674 1555 1555 2.03 SSBOND 13 CYS A 450 CYS A 523 1555 1555 2.03 SSBOND 14 CYS A 474 CYS A 665 1555 1555 2.03 SSBOND 15 CYS A 484 CYS A 498 1555 1555 2.04 SSBOND 16 CYS A 495 CYS A 506 1555 1555 2.04 SSBOND 17 CYS A 563 CYS A 577 1555 1555 2.03 LINK NE2 HIS A 14 OS OS A 704 1555 1555 2.30 LINK NE2 HIS A 289 OS OS A 704 1555 1555 2.48 LINK ND1 HIS A 349 OS OS A 708 1555 1555 2.46 LINK NE2 HIS A 350 OS OS A 708 1555 1555 2.36 LINK NZ LYS A 490 OS OS A 705 1555 1555 2.58 LINK OE1 GLU A 507 OS OS A 705 1555 1555 2.70 LINK NE2 HIS A 578 OS OS A 707 1555 1555 2.06 LINK NH2AARG A 581 OS OS A 707 1555 1555 2.62 LINK O9 NTA A 703 OS OS A 704 1555 1555 2.59 LINK O NTA A 703 OS OS A 704 1555 1555 2.73 LINK OS OS A 704 O HOH A 802 1555 1555 2.80 LINK OS OS A 705 O HOH A 809 1555 1555 2.71 LINK OS OS A 705 O HOH A 810 1555 1555 2.48 LINK OS OS A 706 O HOH A 811 1555 1555 2.41 LINK OS OS A 706 O HOH A 812 1555 1555 2.80 LINK OS OS A 708 O HOH A 805 1555 1555 2.28 LINK OS OS A 708 O HOH A 808 1555 1555 2.66 CISPEP 1 ALA A 73 PRO A 74 0 5.78 CISPEP 2 GLU A 141 PRO A 142 0 0.19 CISPEP 3 LYS A 144 PRO A 145 0 -0.64 CISPEP 4 GLY A 258 LYS A 259 0 0.22 SITE 1 AC1 5 ASP A 392 TYR A 426 TYR A 517 HIS A 585 SITE 2 AC1 5 MLI A 702 SITE 1 AC2 10 ASP A 392 TYR A 426 THR A 452 ARG A 456 SITE 2 AC2 10 THR A 457 ALA A 458 GLY A 459 TYR A 517 SITE 3 AC2 10 HIS A 585 4TI A 701 SITE 1 AC3 4 HIS A 14 HIS A 289 OS A 704 HOH A 802 SITE 1 AC4 4 HIS A 14 HIS A 289 NTA A 703 HOH A 802 SITE 1 AC5 4 LYS A 490 GLU A 507 HOH A 809 HOH A 810 SITE 1 AC6 4 LYS A 489 HOH A 810 HOH A 811 HOH A 812 SITE 1 AC7 3 HIS A 578 ARG A 581 HOH A 806 SITE 1 AC8 5 HIS A 349 HIS A 350 HOH A 805 HOH A 807 SITE 2 AC8 5 HOH A 808 CRYST1 137.954 158.211 107.102 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007249 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006321 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009337 0.00000