data_7H06 # _entry.id 7H06 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7H06 pdb_00007h06 10.2210/pdb7h06/pdb WWPDB D_1001406857 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.entry_id 7H06 _pdbx_database_status.recvd_initial_deposition_date 2024-01-23 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible N _pdbx_database_status.methods_development_category ? # _pdbx_contact_author.id 1 _pdbx_contact_author.email frank.von-delft@diamond.ac.uk _pdbx_contact_author.name_first Frank _pdbx_contact_author.name_last 'von Delft' _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0378-0017 _pdbx_contact_author.name_mi ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Aschenbrenner, J.C.' 1 'Fearon, D.' 2 'Tomlinson, C.W.E.' 3 'Marples, P.G.' 4 'Fairhead, M.' 5 'Balcomb, B.H.' 6 'Chandran, A.V.' 7 'Godoy, A.S.' 8 'Koekemoer, L.' 9 'Lithgo, R.M.' 10 'Ni, X.' 11 'Thompson, W.' 12 'Wang, S.' 13 'Wild, C.' 14 'Williams, E.P.' 15 'Winokan, M.' 16 'Walsh, M.A.' 17 'von Delft, F.' 18 # _citation.id primary _citation.title 'Group deposition of SARS-CoV-2 NSP3 Macrodomain in complex with inhibitors from the ASAP AViDD centre' _citation.journal_abbrev 'To Be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Aschenbrenner, J.C.' ? 1 primary 'Fearon, D.' ? 2 primary 'Tomlinson, C.W.E.' ? 3 primary 'Marples, P.G.' ? 4 primary 'Fairhead, M.' ? 5 primary 'Balcomb, B.H.' ? 6 primary 'Chandran, A.V.' ? 7 primary 'Godoy, A.S.' ? 8 primary 'Koekemoer, L.' ? 9 primary 'Lithgo, R.M.' ? 10 primary 'Ni, X.' ? 11 primary 'Thompson, W.' ? 12 primary 'Wang, S.' ? 13 primary 'Wild, C.' ? 14 primary 'Williams, E.P.' ? 15 primary 'Winokan, M.' ? 16 primary 'Walsh, M.A.' ? 17 primary 'von Delft, F.' ? 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Papain-like protease nsp3' 18275.771 1 3.4.19.12,3.4.22.- ? ? ? 2 non-polymer syn '7-{(1S)-1-[(6-amino-5-chloropyrimidin-4-yl)amino]-2-methylpropyl}-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione' 380.892 1 ? ? ? ? 3 water nat water 18.015 247 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Non-structural protein 3,nsp3,PL2-PRO,Papain-like proteinase,PL-PRO' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGS CVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNL YDKLVSSFLE ; _entity_poly.pdbx_seq_one_letter_code_can ;GEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGS CVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNL YDKLVSSFLE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '7-{(1S)-1-[(6-amino-5-chloropyrimidin-4-yl)amino]-2-methylpropyl}-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione' A1AL1 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLU n 1 3 VAL n 1 4 ASN n 1 5 SER n 1 6 PHE n 1 7 SER n 1 8 GLY n 1 9 TYR n 1 10 LEU n 1 11 LYS n 1 12 LEU n 1 13 THR n 1 14 ASP n 1 15 ASN n 1 16 VAL n 1 17 TYR n 1 18 ILE n 1 19 LYS n 1 20 ASN n 1 21 ALA n 1 22 ASP n 1 23 ILE n 1 24 VAL n 1 25 GLU n 1 26 GLU n 1 27 ALA n 1 28 LYS n 1 29 LYS n 1 30 VAL n 1 31 LYS n 1 32 PRO n 1 33 THR n 1 34 VAL n 1 35 VAL n 1 36 VAL n 1 37 ASN n 1 38 ALA n 1 39 ALA n 1 40 ASN n 1 41 VAL n 1 42 TYR n 1 43 LEU n 1 44 LYS n 1 45 HIS n 1 46 GLY n 1 47 GLY n 1 48 GLY n 1 49 VAL n 1 50 ALA n 1 51 GLY n 1 52 ALA n 1 53 LEU n 1 54 ASN n 1 55 LYS n 1 56 ALA n 1 57 THR n 1 58 ASN n 1 59 ASN n 1 60 ALA n 1 61 MET n 1 62 GLN n 1 63 VAL n 1 64 GLU n 1 65 SER n 1 66 ASP n 1 67 ASP n 1 68 TYR n 1 69 ILE n 1 70 ALA n 1 71 THR n 1 72 ASN n 1 73 GLY n 1 74 PRO n 1 75 LEU n 1 76 LYS n 1 77 VAL n 1 78 GLY n 1 79 GLY n 1 80 SER n 1 81 CYS n 1 82 VAL n 1 83 LEU n 1 84 SER n 1 85 GLY n 1 86 HIS n 1 87 ASN n 1 88 LEU n 1 89 ALA n 1 90 LYS n 1 91 HIS n 1 92 CYS n 1 93 LEU n 1 94 HIS n 1 95 VAL n 1 96 VAL n 1 97 GLY n 1 98 PRO n 1 99 ASN n 1 100 VAL n 1 101 ASN n 1 102 LYS n 1 103 GLY n 1 104 GLU n 1 105 ASP n 1 106 ILE n 1 107 GLN n 1 108 LEU n 1 109 LEU n 1 110 LYS n 1 111 SER n 1 112 ALA n 1 113 TYR n 1 114 GLU n 1 115 ASN n 1 116 PHE n 1 117 ASN n 1 118 GLN n 1 119 HIS n 1 120 GLU n 1 121 VAL n 1 122 LEU n 1 123 LEU n 1 124 ALA n 1 125 PRO n 1 126 LEU n 1 127 LEU n 1 128 SER n 1 129 ALA n 1 130 GLY n 1 131 ILE n 1 132 PHE n 1 133 GLY n 1 134 ALA n 1 135 ASP n 1 136 PRO n 1 137 ILE n 1 138 HIS n 1 139 SER n 1 140 LEU n 1 141 ARG n 1 142 VAL n 1 143 CYS n 1 144 VAL n 1 145 ASP n 1 146 THR n 1 147 VAL n 1 148 ARG n 1 149 THR n 1 150 ASN n 1 151 VAL n 1 152 TYR n 1 153 LEU n 1 154 ALA n 1 155 VAL n 1 156 PHE n 1 157 ASP n 1 158 LYS n 1 159 ASN n 1 160 LEU n 1 161 TYR n 1 162 ASP n 1 163 LYS n 1 164 LEU n 1 165 VAL n 1 166 SER n 1 167 SER n 1 168 PHE n 1 169 LEU n 1 170 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 170 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rep, 1a-1b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1AL1 non-polymer . '7-{(1S)-1-[(6-amino-5-chloropyrimidin-4-yl)amino]-2-methylpropyl}-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione' ? 'C17 H21 Cl N4 O2 S' 380.892 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 HIS 138 138 138 HIS HIS A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 VAL 142 142 142 VAL VAL A . n A 1 143 CYS 143 143 143 CYS CYS A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 TYR 152 152 152 TYR TYR A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 PHE 168 168 168 PHE PHE A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 GLU 170 170 170 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1AL1 1 201 201 A1AL1 LIG A . C 3 HOH 1 301 252 HOH HOH A . C 3 HOH 2 302 201 HOH HOH A . C 3 HOH 3 303 151 HOH HOH A . C 3 HOH 4 304 165 HOH HOH A . C 3 HOH 5 305 250 HOH HOH A . C 3 HOH 6 306 45 HOH HOH A . C 3 HOH 7 307 116 HOH HOH A . C 3 HOH 8 308 129 HOH HOH A . C 3 HOH 9 309 186 HOH HOH A . C 3 HOH 10 310 120 HOH HOH A . C 3 HOH 11 311 244 HOH HOH A . C 3 HOH 12 312 118 HOH HOH A . C 3 HOH 13 313 130 HOH HOH A . C 3 HOH 14 314 236 HOH HOH A . C 3 HOH 15 315 174 HOH HOH A . C 3 HOH 16 316 124 HOH HOH A . C 3 HOH 17 317 54 HOH HOH A . C 3 HOH 18 318 75 HOH HOH A . C 3 HOH 19 319 197 HOH HOH A . C 3 HOH 20 320 193 HOH HOH A . C 3 HOH 21 321 115 HOH HOH A . C 3 HOH 22 322 191 HOH HOH A . C 3 HOH 23 323 8 HOH HOH A . C 3 HOH 24 324 14 HOH HOH A . C 3 HOH 25 325 32 HOH HOH A . C 3 HOH 26 326 43 HOH HOH A . C 3 HOH 27 327 72 HOH HOH A . C 3 HOH 28 328 251 HOH HOH A . C 3 HOH 29 329 71 HOH HOH A . C 3 HOH 30 330 114 HOH HOH A . C 3 HOH 31 331 215 HOH HOH A . C 3 HOH 32 332 159 HOH HOH A . C 3 HOH 33 333 227 HOH HOH A . C 3 HOH 34 334 84 HOH HOH A . C 3 HOH 35 335 91 HOH HOH A . C 3 HOH 36 336 33 HOH HOH A . C 3 HOH 37 337 231 HOH HOH A . C 3 HOH 38 338 183 HOH HOH A . C 3 HOH 39 339 69 HOH HOH A . C 3 HOH 40 340 138 HOH HOH A . C 3 HOH 41 341 259 HOH HOH A . C 3 HOH 42 342 17 HOH HOH A . C 3 HOH 43 343 70 HOH HOH A . C 3 HOH 44 344 9 HOH HOH A . C 3 HOH 45 345 82 HOH HOH A . C 3 HOH 46 346 173 HOH HOH A . C 3 HOH 47 347 182 HOH HOH A . C 3 HOH 48 348 254 HOH HOH A . C 3 HOH 49 349 56 HOH HOH A . C 3 HOH 50 350 2 HOH HOH A . C 3 HOH 51 351 111 HOH HOH A . C 3 HOH 52 352 3 HOH HOH A . C 3 HOH 53 353 77 HOH HOH A . C 3 HOH 54 354 110 HOH HOH A . C 3 HOH 55 355 67 HOH HOH A . C 3 HOH 56 356 198 HOH HOH A . C 3 HOH 57 357 18 HOH HOH A . C 3 HOH 58 358 24 HOH HOH A . C 3 HOH 59 359 122 HOH HOH A . C 3 HOH 60 360 28 HOH HOH A . C 3 HOH 61 361 34 HOH HOH A . C 3 HOH 62 362 39 HOH HOH A . C 3 HOH 63 363 113 HOH HOH A . C 3 HOH 64 364 42 HOH HOH A . C 3 HOH 65 365 51 HOH HOH A . C 3 HOH 66 366 247 HOH HOH A . C 3 HOH 67 367 98 HOH HOH A . C 3 HOH 68 368 21 HOH HOH A . C 3 HOH 69 369 5 HOH HOH A . C 3 HOH 70 370 7 HOH HOH A . C 3 HOH 71 371 19 HOH HOH A . C 3 HOH 72 372 208 HOH HOH A . C 3 HOH 73 373 187 HOH HOH A . C 3 HOH 74 374 52 HOH HOH A . C 3 HOH 75 375 10 HOH HOH A . C 3 HOH 76 376 81 HOH HOH A . C 3 HOH 77 377 103 HOH HOH A . C 3 HOH 78 378 36 HOH HOH A . C 3 HOH 79 379 125 HOH HOH A . C 3 HOH 80 380 180 HOH HOH A . C 3 HOH 81 381 78 HOH HOH A . C 3 HOH 82 382 96 HOH HOH A . C 3 HOH 83 383 185 HOH HOH A . C 3 HOH 84 384 192 HOH HOH A . C 3 HOH 85 385 158 HOH HOH A . C 3 HOH 86 386 31 HOH HOH A . C 3 HOH 87 387 16 HOH HOH A . C 3 HOH 88 388 46 HOH HOH A . C 3 HOH 89 389 15 HOH HOH A . C 3 HOH 90 390 79 HOH HOH A . C 3 HOH 91 391 12 HOH HOH A . C 3 HOH 92 392 80 HOH HOH A . C 3 HOH 93 393 101 HOH HOH A . C 3 HOH 94 394 212 HOH HOH A . C 3 HOH 95 395 47 HOH HOH A . C 3 HOH 96 396 97 HOH HOH A . C 3 HOH 97 397 60 HOH HOH A . C 3 HOH 98 398 210 HOH HOH A . C 3 HOH 99 399 194 HOH HOH A . C 3 HOH 100 400 157 HOH HOH A . C 3 HOH 101 401 4 HOH HOH A . C 3 HOH 102 402 166 HOH HOH A . C 3 HOH 103 403 88 HOH HOH A . C 3 HOH 104 404 6 HOH HOH A . C 3 HOH 105 405 132 HOH HOH A . C 3 HOH 106 406 94 HOH HOH A . C 3 HOH 107 407 25 HOH HOH A . C 3 HOH 108 408 35 HOH HOH A . C 3 HOH 109 409 29 HOH HOH A . C 3 HOH 110 410 229 HOH HOH A . C 3 HOH 111 411 58 HOH HOH A . C 3 HOH 112 412 175 HOH HOH A . C 3 HOH 113 413 117 HOH HOH A . C 3 HOH 114 414 20 HOH HOH A . C 3 HOH 115 415 176 HOH HOH A . C 3 HOH 116 416 65 HOH HOH A . C 3 HOH 117 417 102 HOH HOH A . C 3 HOH 118 418 86 HOH HOH A . C 3 HOH 119 419 95 HOH HOH A . C 3 HOH 120 420 1 HOH HOH A . C 3 HOH 121 421 49 HOH HOH A . C 3 HOH 122 422 48 HOH HOH A . C 3 HOH 123 423 76 HOH HOH A . C 3 HOH 124 424 30 HOH HOH A . C 3 HOH 125 425 257 HOH HOH A . C 3 HOH 126 426 62 HOH HOH A . C 3 HOH 127 427 53 HOH HOH A . C 3 HOH 128 428 23 HOH HOH A . C 3 HOH 129 429 27 HOH HOH A . C 3 HOH 130 430 87 HOH HOH A . C 3 HOH 131 431 41 HOH HOH A . C 3 HOH 132 432 126 HOH HOH A . C 3 HOH 133 433 22 HOH HOH A . C 3 HOH 134 434 68 HOH HOH A . C 3 HOH 135 435 228 HOH HOH A . C 3 HOH 136 436 90 HOH HOH A . C 3 HOH 137 437 189 HOH HOH A . C 3 HOH 138 438 66 HOH HOH A . C 3 HOH 139 439 256 HOH HOH A . C 3 HOH 140 440 13 HOH HOH A . C 3 HOH 141 441 190 HOH HOH A . C 3 HOH 142 442 249 HOH HOH A . C 3 HOH 143 443 119 HOH HOH A . C 3 HOH 144 444 55 HOH HOH A . C 3 HOH 145 445 73 HOH HOH A . C 3 HOH 146 446 162 HOH HOH A . C 3 HOH 147 447 57 HOH HOH A . C 3 HOH 148 448 109 HOH HOH A . C 3 HOH 149 449 89 HOH HOH A . C 3 HOH 150 450 121 HOH HOH A . C 3 HOH 151 451 196 HOH HOH A . C 3 HOH 152 452 61 HOH HOH A . C 3 HOH 153 453 11 HOH HOH A . C 3 HOH 154 454 216 HOH HOH A . C 3 HOH 155 455 44 HOH HOH A . C 3 HOH 156 456 83 HOH HOH A . C 3 HOH 157 457 195 HOH HOH A . C 3 HOH 158 458 153 HOH HOH A . C 3 HOH 159 459 161 HOH HOH A . C 3 HOH 160 460 128 HOH HOH A . C 3 HOH 161 461 199 HOH HOH A . C 3 HOH 162 462 206 HOH HOH A . C 3 HOH 163 463 181 HOH HOH A . C 3 HOH 164 464 207 HOH HOH A . C 3 HOH 165 465 40 HOH HOH A . C 3 HOH 166 466 37 HOH HOH A . C 3 HOH 167 467 213 HOH HOH A . C 3 HOH 168 468 223 HOH HOH A . C 3 HOH 169 469 74 HOH HOH A . C 3 HOH 170 470 50 HOH HOH A . C 3 HOH 171 471 242 HOH HOH A . C 3 HOH 172 472 203 HOH HOH A . C 3 HOH 173 473 246 HOH HOH A . C 3 HOH 174 474 184 HOH HOH A . C 3 HOH 175 475 145 HOH HOH A . C 3 HOH 176 476 107 HOH HOH A . C 3 HOH 177 477 220 HOH HOH A . C 3 HOH 178 478 154 HOH HOH A . C 3 HOH 179 479 200 HOH HOH A . C 3 HOH 180 480 155 HOH HOH A . C 3 HOH 181 481 230 HOH HOH A . C 3 HOH 182 482 168 HOH HOH A . C 3 HOH 183 483 188 HOH HOH A . C 3 HOH 184 484 239 HOH HOH A . C 3 HOH 185 485 177 HOH HOH A . C 3 HOH 186 486 26 HOH HOH A . C 3 HOH 187 487 59 HOH HOH A . C 3 HOH 188 488 172 HOH HOH A . C 3 HOH 189 489 136 HOH HOH A . C 3 HOH 190 490 135 HOH HOH A . C 3 HOH 191 491 255 HOH HOH A . C 3 HOH 192 492 245 HOH HOH A . C 3 HOH 193 493 156 HOH HOH A . C 3 HOH 194 494 221 HOH HOH A . C 3 HOH 195 495 219 HOH HOH A . C 3 HOH 196 496 169 HOH HOH A . C 3 HOH 197 497 141 HOH HOH A . C 3 HOH 198 498 143 HOH HOH A . C 3 HOH 199 499 237 HOH HOH A . C 3 HOH 200 500 139 HOH HOH A . C 3 HOH 201 501 127 HOH HOH A . C 3 HOH 202 502 232 HOH HOH A . C 3 HOH 203 503 170 HOH HOH A . C 3 HOH 204 504 240 HOH HOH A . C 3 HOH 205 505 238 HOH HOH A . C 3 HOH 206 506 171 HOH HOH A . C 3 HOH 207 507 134 HOH HOH A . C 3 HOH 208 508 140 HOH HOH A . C 3 HOH 209 509 234 HOH HOH A . C 3 HOH 210 510 225 HOH HOH A . C 3 HOH 211 511 104 HOH HOH A . C 3 HOH 212 512 133 HOH HOH A . C 3 HOH 213 513 160 HOH HOH A . C 3 HOH 214 514 131 HOH HOH A . C 3 HOH 215 515 224 HOH HOH A . C 3 HOH 216 516 209 HOH HOH A . C 3 HOH 217 517 241 HOH HOH A . C 3 HOH 218 518 253 HOH HOH A . C 3 HOH 219 519 99 HOH HOH A . C 3 HOH 220 520 100 HOH HOH A . C 3 HOH 221 521 163 HOH HOH A . C 3 HOH 222 522 217 HOH HOH A . C 3 HOH 223 523 248 HOH HOH A . C 3 HOH 224 524 235 HOH HOH A . C 3 HOH 225 525 258 HOH HOH A . C 3 HOH 226 526 226 HOH HOH A . C 3 HOH 227 527 147 HOH HOH A . C 3 HOH 228 528 202 HOH HOH A . C 3 HOH 229 529 233 HOH HOH A . C 3 HOH 230 530 205 HOH HOH A . C 3 HOH 231 531 243 HOH HOH A . C 3 HOH 232 532 214 HOH HOH A . C 3 HOH 233 533 108 HOH HOH A . C 3 HOH 234 534 218 HOH HOH A . C 3 HOH 235 535 64 HOH HOH A . C 3 HOH 236 536 211 HOH HOH A . C 3 HOH 237 537 38 HOH HOH A . C 3 HOH 238 538 142 HOH HOH A . C 3 HOH 239 539 92 HOH HOH A . C 3 HOH 240 540 93 HOH HOH A . C 3 HOH 241 541 222 HOH HOH A . C 3 HOH 242 542 204 HOH HOH A . C 3 HOH 243 543 137 HOH HOH A . C 3 HOH 244 544 149 HOH HOH A . C 3 HOH 245 545 167 HOH HOH A . C 3 HOH 246 546 179 HOH HOH A . C 3 HOH 247 547 260 HOH HOH A . # loop_ _software.pdbx_ordinal _software.classification _software.name _software.version _software.date _software.citation_id _software.type _software.location _software.language 1 refinement BUSTER 2.10.4 2023-06-14 ? ? ? ? 2 'data scaling' Aimless . ? ? ? ? ? 3 phasing PHASER . ? ? ? ? ? 4 'data reduction' XDS . ? ? ? ? ? # _cell.entry_id 7H06 _cell.length_a 38.26 _cell.length_b 33.2 _cell.length_c 63.99 _cell.angle_alpha 90 _cell.angle_beta 101.36 _cell.angle_gamma 90 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7H06 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.entry_id 7H06 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_percent_sol 43.58 _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '0.1 M MES (pH 6.50) and 30 % w/v PEG 4000' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS EIGER2 XE 9M' _diffrn_detector.pdbx_collection_date 2023-07-17 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9212 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.9212 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 7H06 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.d_resolution_low 35.41 _reflns.d_resolution_high 1.24 _reflns.number_obs 41007 _reflns.percent_possible_obs 91.3 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_netI_over_sigmaI 14.1 _reflns.pdbx_redundancy 5.3 _reflns.pdbx_Rrim_I_all 0.055 _reflns.pdbx_Rpim_I_all 0.022 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_number_measured_all 216632 _reflns.pdbx_chi_squared 0.95 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_CC_star ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.24 _reflns_shell.d_res_low 1.27 _reflns_shell.number_measured_all 2976 _reflns_shell.number_unique_obs 1549 _reflns_shell.Rmerge_I_obs 0.929 _reflns_shell.pdbx_chi_squared 0.80 _reflns_shell.pdbx_redundancy 1.9 _reflns_shell.percent_possible_obs 47.4 _reflns_shell.pdbx_netI_over_sigmaI_obs 0.8 _reflns_shell.pdbx_Rrim_I_all 1.279 _reflns_shell.pdbx_Rpim_I_all 0.874 _reflns_shell.pdbx_CC_half 0.348 _reflns_shell.percent_possible_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_CC_star ? # _refine.entry_id 7H06 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.24 _refine.ls_d_res_low 35.41 _refine.ls_percent_reflns_obs 91.1 _refine.ls_number_reflns_obs 40990 _refine.ls_number_reflns_R_free 2097 _refine.ls_R_factor_obs 0.1736 _refine.ls_R_factor_R_work 0.1729 _refine.ls_R_factor_R_free 0.1861 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.B_iso_mean 21.66 _refine.aniso_B[1][1] 1.7431 _refine.aniso_B[2][2] 1.6908 _refine.aniso_B[3][3] -3.4339 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 2.7932 _refine.aniso_B[2][3] 0 _refine.pdbx_overall_SU_R_Blow_DPI 0.051 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.05 _refine.overall_SU_R_Cruickshank_DPI 0.047 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.047 _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.965 _refine.pdbx_diffrn_id 1 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? # _refine_analyze.entry_id 7H06 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_obs 0.16 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1266 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 247 _refine_hist.number_atoms_total 1538 _refine_hist.d_res_high 1.24 _refine_hist.d_res_low 35.41 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target 'X-RAY DIFFRACTION' t_bond_d 1354 2 HARMONIC 0.013 ? 'X-RAY DIFFRACTION' t_angle_deg 1845 2 HARMONIC 1.17 ? 'X-RAY DIFFRACTION' t_dihedral_angle_d 458 2 SINUSOIDAL ? ? 'X-RAY DIFFRACTION' t_gen_planes 248 5 HARMONIC ? ? 'X-RAY DIFFRACTION' t_it 1354 10 HARMONIC ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 171 5 SEMIHARMONIC ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 1380 4 SEMIHARMONIC ? ? 'X-RAY DIFFRACTION' t_omega_torsion ? ? ? 4.97 ? 'X-RAY DIFFRACTION' t_other_torsion ? ? ? 15.24 ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.24 _refine_ls_shell.d_res_low 1.26 _refine_ls_shell.percent_reflns_obs 44.37 _refine_ls_shell.number_reflns_obs 820 _refine_ls_shell.number_reflns_R_free 29 _refine_ls_shell.R_factor_obs 0.3509 _refine_ls_shell.R_factor_R_work 0.3498 _refine_ls_shell.R_factor_R_free 0.3823 _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 7H06 _struct.title 'Crystal structure of SARS-CoV-2 NSP3 Macrodomain in complex with ASAP-0010739-001' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 7H06 _struct_keywords.pdbx_keywords 'VIRAL PROTEIN, Hydrolase' _struct_keywords.text 'ASAP, AViDD, Diamond I04-1, crystallographic fragment screening, PanDDA, XChemExplorer, SARS-CoV-2, VIRAL PROTEIN, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_SARS2 _struct_ref.pdbx_db_accession P0DTD1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSC VLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLY DKLVSSFLE ; _struct_ref.pdbx_align_begin 1024 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7H06 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 170 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0DTD1 _struct_ref_seq.db_align_beg 1024 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1192 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 170 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7H06 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P0DTD1 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 22 ? LYS A 31 ? ASP A 22 LYS A 31 1 ? 10 HELX_P HELX_P2 AA2 GLY A 47 ? THR A 57 ? GLY A 47 THR A 57 1 ? 11 HELX_P HELX_P3 AA3 ASN A 59 ? GLY A 73 ? ASN A 59 GLY A 73 1 ? 15 HELX_P HELX_P4 AA4 ASN A 99 ? GLY A 103 ? ASN A 99 GLY A 103 5 ? 5 HELX_P HELX_P5 AA5 GLN A 107 ? ASN A 115 ? GLN A 107 ASN A 115 1 ? 9 HELX_P HELX_P6 AA6 PHE A 116 ? HIS A 119 ? PHE A 116 HIS A 119 5 ? 4 HELX_P HELX_P7 AA7 ALA A 129 ? GLY A 133 ? ALA A 129 GLY A 133 5 ? 5 HELX_P HELX_P8 AA8 ASP A 135 ? VAL A 147 ? ASP A 135 VAL A 147 1 ? 13 HELX_P HELX_P9 AA9 ASP A 157 ? LEU A 169 ? ASP A 157 LEU A 169 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 10 ? THR A 13 ? LEU A 10 THR A 13 AA1 2 VAL A 16 ? ASN A 20 ? VAL A 16 ASN A 20 AA1 3 ASN A 150 ? VAL A 155 ? ASN A 150 VAL A 155 AA1 4 VAL A 121 ? ALA A 124 ? VAL A 121 ALA A 124 AA2 1 VAL A 34 ? ALA A 38 ? VAL A 34 ALA A 38 AA2 2 HIS A 91 ? VAL A 95 ? HIS A 91 VAL A 95 AA2 3 SER A 80 ? SER A 84 ? SER A 80 SER A 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 10 ? N LEU A 10 O ILE A 18 ? O ILE A 18 AA1 2 3 N TYR A 17 ? N TYR A 17 O LEU A 153 ? O LEU A 153 AA1 3 4 O TYR A 152 ? O TYR A 152 N ALA A 124 ? N ALA A 124 AA2 1 2 N ASN A 37 ? N ASN A 37 O VAL A 95 ? O VAL A 95 AA2 2 3 O CYS A 92 ? O CYS A 92 N LEU A 83 ? N LEU A 83 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 120 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.88 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 86 ? ? 57.94 -135.36 2 1 ASP A 157 ? ? -172.42 112.93 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id A1AL1 _pdbx_struct_mod_residue.label_seq_id ? _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id A1AL1 _pdbx_struct_mod_residue.auth_seq_id 201 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LIG _pdbx_struct_mod_residue.details 1 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.T[1][1] -0.0015 _pdbx_refine_tls.T[2][2] -0.0319 _pdbx_refine_tls.T[3][3] -0.0133 _pdbx_refine_tls.T[1][2] 0.0027 _pdbx_refine_tls.T[1][3] -0.0003 _pdbx_refine_tls.T[2][3] 0.0015 _pdbx_refine_tls.L[1][1] 1.3325 _pdbx_refine_tls.L[2][2] 0.4438 _pdbx_refine_tls.L[3][3] 0.3766 _pdbx_refine_tls.L[1][2] -0.0262 _pdbx_refine_tls.L[1][3] 0.221 _pdbx_refine_tls.L[2][3] -0.0348 _pdbx_refine_tls.S[1][1] 0.0459 _pdbx_refine_tls.S[1][2] -0.0304 _pdbx_refine_tls.S[1][3] 0.0001 _pdbx_refine_tls.S[2][1] -0.0304 _pdbx_refine_tls.S[2][2] -0.0241 _pdbx_refine_tls.S[2][3] 0.025 _pdbx_refine_tls.S[3][1] 0.0001 _pdbx_refine_tls.S[3][2] 0.025 _pdbx_refine_tls.S[3][3] -0.0218 _pdbx_refine_tls.origin_x 3.7603 _pdbx_refine_tls.origin_y -7.1227 _pdbx_refine_tls.origin_z 15.6583 _pdbx_refine_tls.details ? _pdbx_refine_tls.method ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id 1 1 'X-RAY DIFFRACTION' . A 4 . A 170 . '{ A|* }' ? ? ? ? 2 1 'X-RAY DIFFRACTION' . A 201 . A 203 . '{ A|* }' ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A VAL 3 ? A VAL 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1AL1 N1 N Y N 1 A1AL1 N3 N N N 2 A1AL1 C4 C Y N 3 A1AL1 C5 C Y N 4 A1AL1 C6 C Y N 5 A1AL1 C7 C Y N 6 A1AL1 C8 C Y N 7 A1AL1 C10 C Y N 8 A1AL1 C13 C Y N 9 A1AL1 C15 C N N 10 A1AL1 O1 O N N 11 A1AL1 S S N N 12 A1AL1 O O N N 13 A1AL1 C14 C N N 14 A1AL1 C16 C N N 15 A1AL1 C11 C Y N 16 A1AL1 C9 C Y N 17 A1AL1 C12 C Y N 18 A1AL1 C3 C N S 19 A1AL1 C1 C N N 20 A1AL1 C2 C N N 21 A1AL1 C C N N 22 A1AL1 N N N N 23 A1AL1 CL CL N N 24 A1AL1 N2 N Y N 25 A1AL1 H10 H N N 26 A1AL1 H11 H N N 27 A1AL1 H9 H N N 28 A1AL1 H13 H N N 29 A1AL1 H14 H N N 30 A1AL1 H17 H N N 31 A1AL1 H18 H N N 32 A1AL1 H16 H N N 33 A1AL1 H15 H N N 34 A1AL1 H19 H N N 35 A1AL1 H20 H N N 36 A1AL1 H12 H N N 37 A1AL1 H H N N 38 A1AL1 H4 H N N 39 A1AL1 H5 H N N 40 A1AL1 H7 H N N 41 A1AL1 H6 H N N 42 A1AL1 H1 H N N 43 A1AL1 H2 H N N 44 A1AL1 H3 H N N 45 A1AL1 H8 H N N 46 ALA N N N N 47 ALA CA C N S 48 ALA C C N N 49 ALA O O N N 50 ALA CB C N N 51 ALA OXT O N N 52 ALA H H N N 53 ALA H2 H N N 54 ALA HA H N N 55 ALA HB1 H N N 56 ALA HB2 H N N 57 ALA HB3 H N N 58 ALA HXT H N N 59 ARG N N N N 60 ARG CA C N S 61 ARG C C N N 62 ARG O O N N 63 ARG CB C N N 64 ARG CG C N N 65 ARG CD C N N 66 ARG NE N N N 67 ARG CZ C N N 68 ARG NH1 N N N 69 ARG NH2 N N N 70 ARG OXT O N N 71 ARG H H N N 72 ARG H2 H N N 73 ARG HA H N N 74 ARG HB2 H N N 75 ARG HB3 H N N 76 ARG HG2 H N N 77 ARG HG3 H N N 78 ARG HD2 H N N 79 ARG HD3 H N N 80 ARG HE H N N 81 ARG HH11 H N N 82 ARG HH12 H N N 83 ARG HH21 H N N 84 ARG HH22 H N N 85 ARG HXT H N N 86 ASN N N N N 87 ASN CA C N S 88 ASN C C N N 89 ASN O O N N 90 ASN CB C N N 91 ASN CG C N N 92 ASN OD1 O N N 93 ASN ND2 N N N 94 ASN OXT O N N 95 ASN H H N N 96 ASN H2 H N N 97 ASN HA H N N 98 ASN HB2 H N N 99 ASN HB3 H N N 100 ASN HD21 H N N 101 ASN HD22 H N N 102 ASN HXT H N N 103 ASP N N N N 104 ASP CA C N S 105 ASP C C N N 106 ASP O O N N 107 ASP CB C N N 108 ASP CG C N N 109 ASP OD1 O N N 110 ASP OD2 O N N 111 ASP OXT O N N 112 ASP H H N N 113 ASP H2 H N N 114 ASP HA H N N 115 ASP HB2 H N N 116 ASP HB3 H N N 117 ASP HD2 H N N 118 ASP HXT H N N 119 CYS N N N N 120 CYS CA C N R 121 CYS C C N N 122 CYS O O N N 123 CYS CB C N N 124 CYS SG S N N 125 CYS OXT O N N 126 CYS H H N N 127 CYS H2 H N N 128 CYS HA H N N 129 CYS HB2 H N N 130 CYS HB3 H N N 131 CYS HG H N N 132 CYS HXT H N N 133 GLN N N N N 134 GLN CA C N S 135 GLN C C N N 136 GLN O O N N 137 GLN CB C N N 138 GLN CG C N N 139 GLN CD C N N 140 GLN OE1 O N N 141 GLN NE2 N N N 142 GLN OXT O N N 143 GLN H H N N 144 GLN H2 H N N 145 GLN HA H N N 146 GLN HB2 H N N 147 GLN HB3 H N N 148 GLN HG2 H N N 149 GLN HG3 H N N 150 GLN HE21 H N N 151 GLN HE22 H N N 152 GLN HXT H N N 153 GLU N N N N 154 GLU CA C N S 155 GLU C C N N 156 GLU O O N N 157 GLU CB C N N 158 GLU CG C N N 159 GLU CD C N N 160 GLU OE1 O N N 161 GLU OE2 O N N 162 GLU OXT O N N 163 GLU H H N N 164 GLU H2 H N N 165 GLU HA H N N 166 GLU HB2 H N N 167 GLU HB3 H N N 168 GLU HG2 H N N 169 GLU HG3 H N N 170 GLU HE2 H N N 171 GLU HXT H N N 172 GLY N N N N 173 GLY CA C N N 174 GLY C C N N 175 GLY O O N N 176 GLY OXT O N N 177 GLY H H N N 178 GLY H2 H N N 179 GLY HA2 H N N 180 GLY HA3 H N N 181 GLY HXT H N N 182 HIS N N N N 183 HIS CA C N S 184 HIS C C N N 185 HIS O O N N 186 HIS CB C N N 187 HIS CG C Y N 188 HIS ND1 N Y N 189 HIS CD2 C Y N 190 HIS CE1 C Y N 191 HIS NE2 N Y N 192 HIS OXT O N N 193 HIS H H N N 194 HIS H2 H N N 195 HIS HA H N N 196 HIS HB2 H N N 197 HIS HB3 H N N 198 HIS HD1 H N N 199 HIS HD2 H N N 200 HIS HE1 H N N 201 HIS HE2 H N N 202 HIS HXT H N N 203 HOH O O N N 204 HOH H1 H N N 205 HOH H2 H N N 206 ILE N N N N 207 ILE CA C N S 208 ILE C C N N 209 ILE O O N N 210 ILE CB C N S 211 ILE CG1 C N N 212 ILE CG2 C N N 213 ILE CD1 C N N 214 ILE OXT O N N 215 ILE H H N N 216 ILE H2 H N N 217 ILE HA H N N 218 ILE HB H N N 219 ILE HG12 H N N 220 ILE HG13 H N N 221 ILE HG21 H N N 222 ILE HG22 H N N 223 ILE HG23 H N N 224 ILE HD11 H N N 225 ILE HD12 H N N 226 ILE HD13 H N N 227 ILE HXT H N N 228 LEU N N N N 229 LEU CA C N S 230 LEU C C N N 231 LEU O O N N 232 LEU CB C N N 233 LEU CG C N N 234 LEU CD1 C N N 235 LEU CD2 C N N 236 LEU OXT O N N 237 LEU H H N N 238 LEU H2 H N N 239 LEU HA H N N 240 LEU HB2 H N N 241 LEU HB3 H N N 242 LEU HG H N N 243 LEU HD11 H N N 244 LEU HD12 H N N 245 LEU HD13 H N N 246 LEU HD21 H N N 247 LEU HD22 H N N 248 LEU HD23 H N N 249 LEU HXT H N N 250 LYS N N N N 251 LYS CA C N S 252 LYS C C N N 253 LYS O O N N 254 LYS CB C N N 255 LYS CG C N N 256 LYS CD C N N 257 LYS CE C N N 258 LYS NZ N N N 259 LYS OXT O N N 260 LYS H H N N 261 LYS H2 H N N 262 LYS HA H N N 263 LYS HB2 H N N 264 LYS HB3 H N N 265 LYS HG2 H N N 266 LYS HG3 H N N 267 LYS HD2 H N N 268 LYS HD3 H N N 269 LYS HE2 H N N 270 LYS HE3 H N N 271 LYS HZ1 H N N 272 LYS HZ2 H N N 273 LYS HZ3 H N N 274 LYS HXT H N N 275 MET N N N N 276 MET CA C N S 277 MET C C N N 278 MET O O N N 279 MET CB C N N 280 MET CG C N N 281 MET SD S N N 282 MET CE C N N 283 MET OXT O N N 284 MET H H N N 285 MET H2 H N N 286 MET HA H N N 287 MET HB2 H N N 288 MET HB3 H N N 289 MET HG2 H N N 290 MET HG3 H N N 291 MET HE1 H N N 292 MET HE2 H N N 293 MET HE3 H N N 294 MET HXT H N N 295 PHE N N N N 296 PHE CA C N S 297 PHE C C N N 298 PHE O O N N 299 PHE CB C N N 300 PHE CG C Y N 301 PHE CD1 C Y N 302 PHE CD2 C Y N 303 PHE CE1 C Y N 304 PHE CE2 C Y N 305 PHE CZ C Y N 306 PHE OXT O N N 307 PHE H H N N 308 PHE H2 H N N 309 PHE HA H N N 310 PHE HB2 H N N 311 PHE HB3 H N N 312 PHE HD1 H N N 313 PHE HD2 H N N 314 PHE HE1 H N N 315 PHE HE2 H N N 316 PHE HZ H N N 317 PHE HXT H N N 318 PRO N N N N 319 PRO CA C N S 320 PRO C C N N 321 PRO O O N N 322 PRO CB C N N 323 PRO CG C N N 324 PRO CD C N N 325 PRO OXT O N N 326 PRO H H N N 327 PRO HA H N N 328 PRO HB2 H N N 329 PRO HB3 H N N 330 PRO HG2 H N N 331 PRO HG3 H N N 332 PRO HD2 H N N 333 PRO HD3 H N N 334 PRO HXT H N N 335 SER N N N N 336 SER CA C N S 337 SER C C N N 338 SER O O N N 339 SER CB C N N 340 SER OG O N N 341 SER OXT O N N 342 SER H H N N 343 SER H2 H N N 344 SER HA H N N 345 SER HB2 H N N 346 SER HB3 H N N 347 SER HG H N N 348 SER HXT H N N 349 THR N N N N 350 THR CA C N S 351 THR C C N N 352 THR O O N N 353 THR CB C N R 354 THR OG1 O N N 355 THR CG2 C N N 356 THR OXT O N N 357 THR H H N N 358 THR H2 H N N 359 THR HA H N N 360 THR HB H N N 361 THR HG1 H N N 362 THR HG21 H N N 363 THR HG22 H N N 364 THR HG23 H N N 365 THR HXT H N N 366 TYR N N N N 367 TYR CA C N S 368 TYR C C N N 369 TYR O O N N 370 TYR CB C N N 371 TYR CG C Y N 372 TYR CD1 C Y N 373 TYR CD2 C Y N 374 TYR CE1 C Y N 375 TYR CE2 C Y N 376 TYR CZ C Y N 377 TYR OH O N N 378 TYR OXT O N N 379 TYR H H N N 380 TYR H2 H N N 381 TYR HA H N N 382 TYR HB2 H N N 383 TYR HB3 H N N 384 TYR HD1 H N N 385 TYR HD2 H N N 386 TYR HE1 H N N 387 TYR HE2 H N N 388 TYR HH H N N 389 TYR HXT H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AL1 C C1 sing N N 1 A1AL1 C2 C1 sing N N 2 A1AL1 C1 C3 sing N N 3 A1AL1 N C3 sing N N 4 A1AL1 C4 N sing N N 5 A1AL1 C4 N1 doub Y N 6 A1AL1 N1 C5 sing Y N 7 A1AL1 C5 N2 doub Y N 8 A1AL1 N2 C6 sing Y N 9 A1AL1 N3 C6 sing N N 10 A1AL1 C6 C7 doub Y N 11 A1AL1 C7 C4 sing Y N 12 A1AL1 CL C7 sing N N 13 A1AL1 C3 C8 sing N N 14 A1AL1 C8 C9 doub Y N 15 A1AL1 C9 C10 sing Y N 16 A1AL1 C10 C11 doub Y N 17 A1AL1 C11 C12 sing Y N 18 A1AL1 C13 C12 doub Y N 19 A1AL1 C8 C13 sing Y N 20 A1AL1 C12 S sing N N 21 A1AL1 O S doub N N 22 A1AL1 S O1 doub N N 23 A1AL1 C14 S sing N N 24 A1AL1 C15 C14 sing N N 25 A1AL1 C16 C15 sing N N 26 A1AL1 C11 C16 sing N N 27 A1AL1 N3 H10 sing N N 28 A1AL1 N3 H11 sing N N 29 A1AL1 C5 H9 sing N N 30 A1AL1 C10 H13 sing N N 31 A1AL1 C13 H14 sing N N 32 A1AL1 C15 H17 sing N N 33 A1AL1 C15 H18 sing N N 34 A1AL1 C14 H16 sing N N 35 A1AL1 C14 H15 sing N N 36 A1AL1 C16 H19 sing N N 37 A1AL1 C16 H20 sing N N 38 A1AL1 C9 H12 sing N N 39 A1AL1 C3 H sing N N 40 A1AL1 C1 H4 sing N N 41 A1AL1 C2 H5 sing N N 42 A1AL1 C2 H7 sing N N 43 A1AL1 C2 H6 sing N N 44 A1AL1 C H1 sing N N 45 A1AL1 C H2 sing N N 46 A1AL1 C H3 sing N N 47 A1AL1 N H8 sing N N 48 ALA N CA sing N N 49 ALA N H sing N N 50 ALA N H2 sing N N 51 ALA CA C sing N N 52 ALA CA CB sing N N 53 ALA CA HA sing N N 54 ALA C O doub N N 55 ALA C OXT sing N N 56 ALA CB HB1 sing N N 57 ALA CB HB2 sing N N 58 ALA CB HB3 sing N N 59 ALA OXT HXT sing N N 60 ARG N CA sing N N 61 ARG N H sing N N 62 ARG N H2 sing N N 63 ARG CA C sing N N 64 ARG CA CB sing N N 65 ARG CA HA sing N N 66 ARG C O doub N N 67 ARG C OXT sing N N 68 ARG CB CG sing N N 69 ARG CB HB2 sing N N 70 ARG CB HB3 sing N N 71 ARG CG CD sing N N 72 ARG CG HG2 sing N N 73 ARG CG HG3 sing N N 74 ARG CD NE sing N N 75 ARG CD HD2 sing N N 76 ARG CD HD3 sing N N 77 ARG NE CZ sing N N 78 ARG NE HE sing N N 79 ARG CZ NH1 sing N N 80 ARG CZ NH2 doub N N 81 ARG NH1 HH11 sing N N 82 ARG NH1 HH12 sing N N 83 ARG NH2 HH21 sing N N 84 ARG NH2 HH22 sing N N 85 ARG OXT HXT sing N N 86 ASN N CA sing N N 87 ASN N H sing N N 88 ASN N H2 sing N N 89 ASN CA C sing N N 90 ASN CA CB sing N N 91 ASN CA HA sing N N 92 ASN C O doub N N 93 ASN C OXT sing N N 94 ASN CB CG sing N N 95 ASN CB HB2 sing N N 96 ASN CB HB3 sing N N 97 ASN CG OD1 doub N N 98 ASN CG ND2 sing N N 99 ASN ND2 HD21 sing N N 100 ASN ND2 HD22 sing N N 101 ASN OXT HXT sing N N 102 ASP N CA sing N N 103 ASP N H sing N N 104 ASP N H2 sing N N 105 ASP CA C sing N N 106 ASP CA CB sing N N 107 ASP CA HA sing N N 108 ASP C O doub N N 109 ASP C OXT sing N N 110 ASP CB CG sing N N 111 ASP CB HB2 sing N N 112 ASP CB HB3 sing N N 113 ASP CG OD1 doub N N 114 ASP CG OD2 sing N N 115 ASP OD2 HD2 sing N N 116 ASP OXT HXT sing N N 117 CYS N CA sing N N 118 CYS N H sing N N 119 CYS N H2 sing N N 120 CYS CA C sing N N 121 CYS CA CB sing N N 122 CYS CA HA sing N N 123 CYS C O doub N N 124 CYS C OXT sing N N 125 CYS CB SG sing N N 126 CYS CB HB2 sing N N 127 CYS CB HB3 sing N N 128 CYS SG HG sing N N 129 CYS OXT HXT sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 PHE N CA sing N N 285 PHE N H sing N N 286 PHE N H2 sing N N 287 PHE CA C sing N N 288 PHE CA CB sing N N 289 PHE CA HA sing N N 290 PHE C O doub N N 291 PHE C OXT sing N N 292 PHE CB CG sing N N 293 PHE CB HB2 sing N N 294 PHE CB HB3 sing N N 295 PHE CG CD1 doub Y N 296 PHE CG CD2 sing Y N 297 PHE CD1 CE1 sing Y N 298 PHE CD1 HD1 sing N N 299 PHE CD2 CE2 doub Y N 300 PHE CD2 HD2 sing N N 301 PHE CE1 CZ doub Y N 302 PHE CE1 HE1 sing N N 303 PHE CE2 CZ sing Y N 304 PHE CE2 HE2 sing N N 305 PHE CZ HZ sing N N 306 PHE OXT HXT sing N N 307 PRO N CA sing N N 308 PRO N CD sing N N 309 PRO N H sing N N 310 PRO CA C sing N N 311 PRO CA CB sing N N 312 PRO CA HA sing N N 313 PRO C O doub N N 314 PRO C OXT sing N N 315 PRO CB CG sing N N 316 PRO CB HB2 sing N N 317 PRO CB HB3 sing N N 318 PRO CG CD sing N N 319 PRO CG HG2 sing N N 320 PRO CG HG3 sing N N 321 PRO CD HD2 sing N N 322 PRO CD HD3 sing N N 323 PRO OXT HXT sing N N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TYR N CA sing N N 354 TYR N H sing N N 355 TYR N H2 sing N N 356 TYR CA C sing N N 357 TYR CA CB sing N N 358 TYR CA HA sing N N 359 TYR C O doub N N 360 TYR C OXT sing N N 361 TYR CB CG sing N N 362 TYR CB HB2 sing N N 363 TYR CB HB3 sing N N 364 TYR CG CD1 doub Y N 365 TYR CG CD2 sing Y N 366 TYR CD1 CE1 sing Y N 367 TYR CD1 HD1 sing N N 368 TYR CD2 CE2 doub Y N 369 TYR CD2 HD2 sing N N 370 TYR CE1 CZ doub Y N 371 TYR CE1 HE1 sing N N 372 TYR CE2 CZ sing Y N 373 TYR CE2 HE2 sing N N 374 TYR CZ OH sing N N 375 TYR OH HH sing N N 376 TYR OXT HXT sing N N 377 VAL N CA sing N N 378 VAL N H sing N N 379 VAL N H2 sing N N 380 VAL CA C sing N N 381 VAL CA CB sing N N 382 VAL CA HA sing N N 383 VAL C O doub N N 384 VAL C OXT sing N N 385 VAL CB CG1 sing N N 386 VAL CB CG2 sing N N 387 VAL CB HB sing N N 388 VAL CG1 HG11 sing N N 389 VAL CG1 HG12 sing N N 390 VAL CG1 HG13 sing N N 391 VAL CG2 HG21 sing N N 392 VAL CG2 HG22 sing N N 393 VAL CG2 HG23 sing N N 394 VAL OXT HXT sing N N 395 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number U19AI171399 _pdbx_audit_support.ordinal 1 # _pdbx_deposit_group.group_id G_1002283 _pdbx_deposit_group.group_description None _pdbx_deposit_group.group_title 'Group deposition of SARS-CoV-2 NSP3 Macrodomain in complex with inhibitors from the ASAP AViDD centre' _pdbx_deposit_group.group_type 'changed state' # _atom_sites.entry_id 7H06 _atom_sites.fract_transf_matrix[1][1] 0.026137 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005251 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030120 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015940 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_