data_7IMW # _entry.id 7IMW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7IMW pdb_00007imw 10.2210/pdb7imw/pdb WWPDB D_1001408948 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-08-26 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.entry_id 7IMW _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 2025-08-11 _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _pdbx_contact_author.id 1 _pdbx_contact_author.email frank.von-delft@diamond.ac.uk _pdbx_contact_author.name_first Frank _pdbx_contact_author.name_last 'von Delft' _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0378-0017 _pdbx_contact_author.name_mi ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Aschenbrenner, J.C.' 1 ? 'Luptak, J.' 2 ? 'Balcomb, B.H.' 3 ? 'Marples, P.G.' 4 ? 'Bellini, D.' 5 ? 'Yu, C.W.' 6 ? 'Douangamath, A.' 7 ? 'Dias, A.' 8 ? 'Powell, A.' 9 ? 'Fearon, D.' 10 ? 'James, L.' 11 ? 'von Delft, F.' 12 ? # _citation.id primary _citation.title 'Group deposition for crystallographic fragment screening of SARS-CoV-2 nucleocapsid protein (CTD)' _citation.journal_abbrev 'To Be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.identifier_ORCID _citation_author.ordinal primary 'Luptak, J.' ? 1 primary 'Aschenbrenner, J.C.' ? 2 primary 'Balcomb, B.H.' ? 3 primary 'Marples, P.G.' ? 4 primary 'Bellini, D.' ? 5 primary 'Yu, C.W.' ? 6 primary 'Douangamath, A.' ? 7 primary 'Dias, A.' ? 8 primary 'Powell, A.' ? 9 primary 'Fearon, D.' ? 10 primary 'James, L.' ? 11 primary 'von Delft, F.' ? 12 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Nucleoprotein 13118.743 1 ? ? ? ? 2 non-polymer man '(2S)-1-ACETYL-2-METHYL-1,2,3,4-TETRAHYDROQUINOLINE' 189.254 1 ? ? ? ? 3 non-polymer man 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 1 ? ? ? ? 6 water nat water 18.015 139 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'N,Nucleocapsid protein,NC,Protein N' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPS GTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP ; _entity_poly.pdbx_seq_one_letter_code_can ;SMSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPS GTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2S)-1-ACETYL-2-METHYL-1,2,3,4-TETRAHYDROQUINOLINE' TVP 3 'DI(HYDROXYETHYL)ETHER' PEG 4 GLYCEROL GOL 5 'ISOPROPYL ALCOHOL' IPA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 SER n 1 4 ALA n 1 5 ALA n 1 6 GLU n 1 7 ALA n 1 8 SER n 1 9 LYS n 1 10 LYS n 1 11 PRO n 1 12 ARG n 1 13 GLN n 1 14 LYS n 1 15 ARG n 1 16 THR n 1 17 ALA n 1 18 THR n 1 19 LYS n 1 20 ALA n 1 21 TYR n 1 22 ASN n 1 23 VAL n 1 24 THR n 1 25 GLN n 1 26 ALA n 1 27 PHE n 1 28 GLY n 1 29 ARG n 1 30 ARG n 1 31 GLY n 1 32 PRO n 1 33 GLU n 1 34 GLN n 1 35 THR n 1 36 GLN n 1 37 GLY n 1 38 ASN n 1 39 PHE n 1 40 GLY n 1 41 ASP n 1 42 GLN n 1 43 GLU n 1 44 LEU n 1 45 ILE n 1 46 ARG n 1 47 GLN n 1 48 GLY n 1 49 THR n 1 50 ASP n 1 51 TYR n 1 52 LYS n 1 53 HIS n 1 54 TRP n 1 55 PRO n 1 56 GLN n 1 57 ILE n 1 58 ALA n 1 59 GLN n 1 60 PHE n 1 61 ALA n 1 62 PRO n 1 63 SER n 1 64 ALA n 1 65 SER n 1 66 ALA n 1 67 PHE n 1 68 PHE n 1 69 GLY n 1 70 MET n 1 71 SER n 1 72 ARG n 1 73 ILE n 1 74 GLY n 1 75 MET n 1 76 GLU n 1 77 VAL n 1 78 THR n 1 79 PRO n 1 80 SER n 1 81 GLY n 1 82 THR n 1 83 TRP n 1 84 LEU n 1 85 THR n 1 86 TYR n 1 87 THR n 1 88 GLY n 1 89 ALA n 1 90 ILE n 1 91 LYS n 1 92 LEU n 1 93 ASP n 1 94 ASP n 1 95 LYS n 1 96 ASP n 1 97 PRO n 1 98 ASN n 1 99 PHE n 1 100 LYS n 1 101 ASP n 1 102 GLN n 1 103 VAL n 1 104 ILE n 1 105 LEU n 1 106 LEU n 1 107 ASN n 1 108 LYS n 1 109 HIS n 1 110 ILE n 1 111 ASP n 1 112 ALA n 1 113 TYR n 1 114 LYS n 1 115 THR n 1 116 PHE n 1 117 PRO n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 117 '2019-nCoV, SARS-CoV-2' ? ? ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? ? ? ? ? ? ? ? ? ? SARS-CoV-2 2697049 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? ? ? ? ? ? ? ? ? ? SARS-CoV-2 2697049 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TVP non-polymer . '(2S)-1-ACETYL-2-METHYL-1,2,3,4-TETRAHYDROQUINOLINE' ? 'C12 H15 N O' 189.254 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 248 ? ? ? A . n A 1 2 MET 2 249 249 MET MET A . n A 1 3 SER 3 250 250 SER SER A . n A 1 4 ALA 4 251 251 ALA ALA A . n A 1 5 ALA 5 252 252 ALA ALA A . n A 1 6 GLU 6 253 253 GLU GLU A . n A 1 7 ALA 7 254 254 ALA ALA A . n A 1 8 SER 8 255 255 SER SER A . n A 1 9 LYS 9 256 256 LYS LYS A . n A 1 10 LYS 10 257 257 LYS LYS A . n A 1 11 PRO 11 258 258 PRO PRO A . n A 1 12 ARG 12 259 259 ARG ARG A . n A 1 13 GLN 13 260 260 GLN GLN A . n A 1 14 LYS 14 261 261 LYS LYS A . n A 1 15 ARG 15 262 262 ARG ARG A . n A 1 16 THR 16 263 263 THR THR A . n A 1 17 ALA 17 264 264 ALA ALA A . n A 1 18 THR 18 265 265 THR THR A . n A 1 19 LYS 19 266 266 LYS LYS A . n A 1 20 ALA 20 267 267 ALA ALA A . n A 1 21 TYR 21 268 268 TYR TYR A . n A 1 22 ASN 22 269 269 ASN ASN A . n A 1 23 VAL 23 270 270 VAL VAL A . n A 1 24 THR 24 271 271 THR THR A . n A 1 25 GLN 25 272 272 GLN GLN A . n A 1 26 ALA 26 273 273 ALA ALA A . n A 1 27 PHE 27 274 274 PHE PHE A . n A 1 28 GLY 28 275 275 GLY GLY A . n A 1 29 ARG 29 276 276 ARG ARG A . n A 1 30 ARG 30 277 277 ARG ARG A . n A 1 31 GLY 31 278 278 GLY GLY A . n A 1 32 PRO 32 279 279 PRO PRO A . n A 1 33 GLU 33 280 280 GLU GLU A . n A 1 34 GLN 34 281 281 GLN GLN A . n A 1 35 THR 35 282 282 THR THR A . n A 1 36 GLN 36 283 283 GLN GLN A . n A 1 37 GLY 37 284 284 GLY GLY A . n A 1 38 ASN 38 285 285 ASN ASN A . n A 1 39 PHE 39 286 286 PHE PHE A . n A 1 40 GLY 40 287 287 GLY GLY A . n A 1 41 ASP 41 288 288 ASP ASP A . n A 1 42 GLN 42 289 289 GLN GLN A . n A 1 43 GLU 43 290 290 GLU GLU A . n A 1 44 LEU 44 291 291 LEU LEU A . n A 1 45 ILE 45 292 292 ILE ILE A . n A 1 46 ARG 46 293 293 ARG ARG A . n A 1 47 GLN 47 294 294 GLN GLN A . n A 1 48 GLY 48 295 295 GLY GLY A . n A 1 49 THR 49 296 296 THR THR A . n A 1 50 ASP 50 297 297 ASP ASP A . n A 1 51 TYR 51 298 298 TYR TYR A . n A 1 52 LYS 52 299 299 LYS LYS A . n A 1 53 HIS 53 300 300 HIS HIS A . n A 1 54 TRP 54 301 301 TRP TRP A . n A 1 55 PRO 55 302 302 PRO PRO A . n A 1 56 GLN 56 303 303 GLN GLN A . n A 1 57 ILE 57 304 304 ILE ILE A . n A 1 58 ALA 58 305 305 ALA ALA A . n A 1 59 GLN 59 306 306 GLN GLN A . n A 1 60 PHE 60 307 307 PHE PHE A . n A 1 61 ALA 61 308 308 ALA ALA A . n A 1 62 PRO 62 309 309 PRO PRO A . n A 1 63 SER 63 310 310 SER SER A . n A 1 64 ALA 64 311 311 ALA ALA A . n A 1 65 SER 65 312 312 SER SER A . n A 1 66 ALA 66 313 313 ALA ALA A . n A 1 67 PHE 67 314 314 PHE PHE A . n A 1 68 PHE 68 315 315 PHE PHE A . n A 1 69 GLY 69 316 316 GLY GLY A . n A 1 70 MET 70 317 317 MET MET A . n A 1 71 SER 71 318 318 SER SER A . n A 1 72 ARG 72 319 319 ARG ARG A . n A 1 73 ILE 73 320 320 ILE ILE A . n A 1 74 GLY 74 321 321 GLY GLY A . n A 1 75 MET 75 322 322 MET MET A . n A 1 76 GLU 76 323 323 GLU GLU A . n A 1 77 VAL 77 324 324 VAL VAL A . n A 1 78 THR 78 325 325 THR THR A . n A 1 79 PRO 79 326 326 PRO PRO A . n A 1 80 SER 80 327 327 SER SER A . n A 1 81 GLY 81 328 328 GLY GLY A . n A 1 82 THR 82 329 329 THR THR A . n A 1 83 TRP 83 330 330 TRP TRP A . n A 1 84 LEU 84 331 331 LEU LEU A . n A 1 85 THR 85 332 332 THR THR A . n A 1 86 TYR 86 333 333 TYR TYR A . n A 1 87 THR 87 334 334 THR THR A . n A 1 88 GLY 88 335 335 GLY GLY A . n A 1 89 ALA 89 336 336 ALA ALA A . n A 1 90 ILE 90 337 337 ILE ILE A . n A 1 91 LYS 91 338 338 LYS LYS A . n A 1 92 LEU 92 339 339 LEU LEU A . n A 1 93 ASP 93 340 340 ASP ASP A . n A 1 94 ASP 94 341 341 ASP ASP A . n A 1 95 LYS 95 342 342 LYS LYS A . n A 1 96 ASP 96 343 343 ASP ASP A . n A 1 97 PRO 97 344 344 PRO PRO A . n A 1 98 ASN 98 345 345 ASN ASN A . n A 1 99 PHE 99 346 346 PHE PHE A . n A 1 100 LYS 100 347 347 LYS LYS A . n A 1 101 ASP 101 348 348 ASP ASP A . n A 1 102 GLN 102 349 349 GLN GLN A . n A 1 103 VAL 103 350 350 VAL VAL A . n A 1 104 ILE 104 351 351 ILE ILE A . n A 1 105 LEU 105 352 352 LEU LEU A . n A 1 106 LEU 106 353 353 LEU LEU A . n A 1 107 ASN 107 354 354 ASN ASN A . n A 1 108 LYS 108 355 355 LYS LYS A . n A 1 109 HIS 109 356 356 HIS HIS A . n A 1 110 ILE 110 357 357 ILE ILE A . n A 1 111 ASP 111 358 358 ASP ASP A . n A 1 112 ALA 112 359 359 ALA ALA A . n A 1 113 TYR 113 360 360 TYR TYR A . n A 1 114 LYS 114 361 361 LYS LYS A . n A 1 115 THR 115 362 362 THR THR A . n A 1 116 PHE 116 363 363 PHE PHE A . n A 1 117 PRO 117 364 364 PRO PRO A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id TVP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id TVP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TVP 1 401 464 TVP LIG A . C 3 PEG 1 402 465 PEG PEG A . D 4 GOL 1 403 133 GOL GOL A . E 5 IPA 1 404 401 IPA IPA A . F 6 HOH 1 501 1 HOH HOH A . F 6 HOH 2 502 83 HOH HOH A . F 6 HOH 3 503 44 HOH HOH A . F 6 HOH 4 504 27 HOH HOH A . F 6 HOH 5 505 25 HOH HOH A . F 6 HOH 6 506 95 HOH HOH A . F 6 HOH 7 507 1 HOH HOH A . F 6 HOH 8 508 18 HOH HOH A . F 6 HOH 9 509 39 HOH HOH A . F 6 HOH 10 510 10 HOH HOH A . F 6 HOH 11 511 36 HOH HOH A . F 6 HOH 12 512 54 HOH HOH A . F 6 HOH 13 513 11 HOH HOH A . F 6 HOH 14 514 89 HOH HOH A . F 6 HOH 15 515 114 HOH HOH A . F 6 HOH 16 516 45 HOH HOH A . F 6 HOH 17 517 74 HOH HOH A . F 6 HOH 18 518 57 HOH HOH A . F 6 HOH 19 519 91 HOH HOH A . F 6 HOH 20 520 128 HOH HOH A . F 6 HOH 21 521 55 HOH HOH A . F 6 HOH 22 522 76 HOH HOH A . F 6 HOH 23 523 8 HOH HOH A . F 6 HOH 24 524 2 HOH HOH A . F 6 HOH 25 525 52 HOH HOH A . F 6 HOH 26 526 51 HOH HOH A . F 6 HOH 27 527 16 HOH HOH A . F 6 HOH 28 528 66 HOH HOH A . F 6 HOH 29 529 19 HOH HOH A . F 6 HOH 30 530 41 HOH HOH A . F 6 HOH 31 531 58 HOH HOH A . F 6 HOH 32 532 130 HOH HOH A . F 6 HOH 33 533 21 HOH HOH A . F 6 HOH 34 534 3 HOH HOH A . F 6 HOH 35 535 101 HOH HOH A . F 6 HOH 36 536 4 HOH HOH A . F 6 HOH 37 537 8 HOH HOH A . F 6 HOH 38 538 22 HOH HOH A . F 6 HOH 39 539 7 HOH HOH A . F 6 HOH 40 540 13 HOH HOH A . F 6 HOH 41 541 60 HOH HOH A . F 6 HOH 42 542 75 HOH HOH A . F 6 HOH 43 543 6 HOH HOH A . F 6 HOH 44 544 70 HOH HOH A . F 6 HOH 45 545 17 HOH HOH A . F 6 HOH 46 546 109 HOH HOH A . F 6 HOH 47 547 47 HOH HOH A . F 6 HOH 48 548 20 HOH HOH A . F 6 HOH 49 549 94 HOH HOH A . F 6 HOH 50 550 12 HOH HOH A . F 6 HOH 51 551 88 HOH HOH A . F 6 HOH 52 552 73 HOH HOH A . F 6 HOH 53 553 15 HOH HOH A . F 6 HOH 54 554 30 HOH HOH A . F 6 HOH 55 555 23 HOH HOH A . F 6 HOH 56 556 5 HOH HOH A . F 6 HOH 57 557 34 HOH HOH A . F 6 HOH 58 558 110 HOH HOH A . F 6 HOH 59 559 37 HOH HOH A . F 6 HOH 60 560 72 HOH HOH A . F 6 HOH 61 561 29 HOH HOH A . F 6 HOH 62 562 33 HOH HOH A . F 6 HOH 63 563 115 HOH HOH A . F 6 HOH 64 564 43 HOH HOH A . F 6 HOH 65 565 106 HOH HOH A . F 6 HOH 66 566 123 HOH HOH A . F 6 HOH 67 567 31 HOH HOH A . F 6 HOH 68 568 48 HOH HOH A . F 6 HOH 69 569 32 HOH HOH A . F 6 HOH 70 570 35 HOH HOH A . F 6 HOH 71 571 24 HOH HOH A . F 6 HOH 72 572 111 HOH HOH A . F 6 HOH 73 573 14 HOH HOH A . F 6 HOH 74 574 97 HOH HOH A . F 6 HOH 75 575 12 HOH HOH A . F 6 HOH 76 576 42 HOH HOH A . F 6 HOH 77 577 102 HOH HOH A . F 6 HOH 78 578 56 HOH HOH A . F 6 HOH 79 579 67 HOH HOH A . F 6 HOH 80 580 69 HOH HOH A . F 6 HOH 81 581 131 HOH HOH A . F 6 HOH 82 582 64 HOH HOH A . F 6 HOH 83 583 28 HOH HOH A . F 6 HOH 84 584 93 HOH HOH A . F 6 HOH 85 585 49 HOH HOH A . F 6 HOH 86 586 40 HOH HOH A . F 6 HOH 87 587 121 HOH HOH A . F 6 HOH 88 588 92 HOH HOH A . F 6 HOH 89 589 99 HOH HOH A . F 6 HOH 90 590 132 HOH HOH A . F 6 HOH 91 591 98 HOH HOH A . F 6 HOH 92 592 5 HOH HOH A . F 6 HOH 93 593 108 HOH HOH A . F 6 HOH 94 594 84 HOH HOH A . F 6 HOH 95 595 86 HOH HOH A . F 6 HOH 96 596 9 HOH HOH A . F 6 HOH 97 597 63 HOH HOH A . F 6 HOH 98 598 119 HOH HOH A . F 6 HOH 99 599 104 HOH HOH A . F 6 HOH 100 600 87 HOH HOH A . F 6 HOH 101 601 85 HOH HOH A . F 6 HOH 102 602 50 HOH HOH A . F 6 HOH 103 603 103 HOH HOH A . F 6 HOH 104 604 81 HOH HOH A . F 6 HOH 105 605 78 HOH HOH A . F 6 HOH 106 606 127 HOH HOH A . F 6 HOH 107 607 53 HOH HOH A . F 6 HOH 108 608 13 HOH HOH A . F 6 HOH 109 609 38 HOH HOH A . F 6 HOH 110 610 10 HOH HOH A . F 6 HOH 111 611 61 HOH HOH A . F 6 HOH 112 612 113 HOH HOH A . F 6 HOH 113 613 107 HOH HOH A . F 6 HOH 114 614 100 HOH HOH A . F 6 HOH 115 615 7 HOH HOH A . F 6 HOH 116 616 77 HOH HOH A . F 6 HOH 117 617 82 HOH HOH A . F 6 HOH 118 618 46 HOH HOH A . F 6 HOH 119 619 116 HOH HOH A . F 6 HOH 120 620 80 HOH HOH A . F 6 HOH 121 621 6 HOH HOH A . F 6 HOH 122 622 90 HOH HOH A . F 6 HOH 123 623 11 HOH HOH A . F 6 HOH 124 624 122 HOH HOH A . F 6 HOH 125 625 2 HOH HOH A . F 6 HOH 126 626 124 HOH HOH A . F 6 HOH 127 627 59 HOH HOH A . F 6 HOH 128 628 112 HOH HOH A . F 6 HOH 129 629 9 HOH HOH A . F 6 HOH 130 630 125 HOH HOH A . F 6 HOH 131 631 120 HOH HOH A . F 6 HOH 132 632 79 HOH HOH A . F 6 HOH 133 633 105 HOH HOH A . F 6 HOH 134 634 118 HOH HOH A . F 6 HOH 135 635 96 HOH HOH A . F 6 HOH 136 636 117 HOH HOH A . F 6 HOH 137 637 129 HOH HOH A . F 6 HOH 138 638 126 HOH HOH A . F 6 HOH 139 639 3 HOH HOH A . # loop_ _software.classification _software.name _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language refinement REFMAC 5.8.0267 ? 1 ? ? ? ? 'data scaling' Aimless . ? 2 ? ? ? ? phasing PHASER . ? 3 ? ? ? ? 'data reduction' XDS . ? 4 ? ? ? ? # _cell.entry_id 7IMW _cell.length_a 88.318 _cell.length_b 88.318 _cell.length_c 40.661 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7IMW _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 # _exptl.entry_id 7IMW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.02 _exptl_crystal.density_percent_sol 59.30 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '0.1 M HEPES, pH 7.8, 10 % isopropanol, 23 % PEG4000' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? # _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS EIGER2 XE 9M' _diffrn_detector.pdbx_collection_date 2020-08-13 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91261 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_wavelength_list 0.91261 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 7IMW _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.d_resolution_low 44.159 _reflns.d_resolution_high 1.687 _reflns.number_obs 8959 _reflns.percent_possible_obs 50.2 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_netI_over_sigmaI 10.9 _reflns.pdbx_redundancy 6.3 _reflns.pdbx_Rrim_I_all 0.064 _reflns.pdbx_Rpim_I_all 0.025 _reflns.pdbx_number_measured_all 56880 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.687 _reflns_shell.d_res_low 1.811 _reflns_shell.number_measured_all 2276 _reflns_shell.number_unique_obs 448 _reflns_shell.Rmerge_I_obs 0.786 _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.percent_possible_obs 13.2 _reflns_shell.pdbx_netI_over_sigmaI_obs 1.6 _reflns_shell.pdbx_Rrim_I_all 0.873 _reflns_shell.pdbx_Rpim_I_all 0.370 _reflns_shell.percent_possible_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 7IMW _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8518 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.20 _refine.ls_d_res_high 1.69 _refine.ls_percent_reflns_obs 50.20 _refine.ls_R_factor_obs 0.19857 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19532 _refine.ls_R_factor_R_free 0.25813 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 441 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.918 _refine.B_iso_mean 31.974 _refine.aniso_B[1][1] -0.08 _refine.aniso_B[2][2] -0.08 _refine.aniso_B[3][3] 0.16 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 6YUN _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.333 _refine.pdbx_overall_ESU_R_Free 0.235 _refine.overall_SU_ML 0.112 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.360 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 918 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 139 _refine_hist.number_atoms_total 1088 _refine_hist.d_res_high 1.69 _refine_hist.d_res_low 44.20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.013 ? 1519 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.015 ? 1320 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.514 1.668 ? 1922 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.247 1.615 ? 3059 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.217 5.000 ? 183 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.127 22.368 ? 76 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.152 15.000 ? 244 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.636 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.060 0.200 ? 181 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1729 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 351 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.147 3.122 ? 730 'X-RAY DIFFRACTION' ? r_mcbond_other 2.150 3.126 ? 728 'X-RAY DIFFRACTION' ? r_mcangle_it 3.515 4.711 ? 879 'X-RAY DIFFRACTION' ? r_mcangle_other 3.513 4.709 ? 878 'X-RAY DIFFRACTION' ? r_scbond_it 2.261 3.387 ? 787 'X-RAY DIFFRACTION' ? r_scbond_other 2.260 3.387 ? 788 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 3.665 5.078 ? 1043 'X-RAY DIFFRACTION' ? r_long_range_B_refined 5.660 36.646 ? 1746 'X-RAY DIFFRACTION' ? r_long_range_B_other 5.660 36.648 ? 1746 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.687 _refine_ls_shell.d_res_low 1.731 _refine_ls_shell.number_reflns_R_work 81 _refine_ls_shell.R_factor_R_work 0.428 _refine_ls_shell.percent_reflns_obs 6.39 _refine_ls_shell.R_factor_R_free 0.440 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 5 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 7IMW _struct.title ;Group deposition for crystallographic fragment screening of SARS-CoV-2 nucleocapsid protein (CTD) -- Crystal Structure of SARS-CoV-2 nucleocapsid protein (CTD) in complex with Z28870646 (Nprot-x0615) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 7IMW _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text ;Diamond I04-1, PanDDA2, XChemExplorer, crystallographic fragment screening, SARS-CoV-2, nucleocapsid protein, N protein, VIRAL PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NCAP_SARS2 _struct_ref.pdbx_db_accession P0DTC9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGT WLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP ; _struct_ref.pdbx_align_begin 250 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7IMW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 117 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0DTC9 _struct_ref_seq.db_align_beg 250 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 364 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 250 _struct_ref_seq.pdbx_auth_seq_align_end 364 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7IMW SER A 1 ? UNP P0DTC9 ? ? 'expression tag' 248 1 1 7IMW MET A 2 ? UNP P0DTC9 ? ? 'expression tag' 249 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6510 ? 1 MORE -17 ? 1 'SSA (A^2)' 12130 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 3 ? LYS A 10 ? SER A 250 LYS A 257 1 ? 8 HELX_P HELX_P2 AA2 PRO A 11 ? ARG A 15 ? PRO A 258 ARG A 262 5 ? 5 HELX_P HELX_P3 AA3 ASN A 22 ? GLY A 28 ? ASN A 269 GLY A 275 1 ? 7 HELX_P HELX_P4 AA4 ASP A 41 ? GLY A 48 ? ASP A 288 GLY A 295 1 ? 8 HELX_P HELX_P5 AA5 THR A 49 ? TYR A 51 ? THR A 296 TYR A 298 5 ? 3 HELX_P HELX_P6 AA6 HIS A 53 ? GLN A 59 ? HIS A 300 GLN A 306 1 ? 7 HELX_P HELX_P7 AA7 SER A 63 ? SER A 71 ? SER A 310 SER A 318 1 ? 9 HELX_P HELX_P8 AA8 ASN A 98 ? ILE A 110 ? ASN A 345 ILE A 357 1 ? 13 HELX_P HELX_P9 AA9 ASP A 111 ? PHE A 116 ? ASP A 358 PHE A 363 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 72 ? THR A 78 ? ARG A 319 THR A 325 AA1 2 GLY A 81 ? THR A 87 ? GLY A 328 THR A 334 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 78 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 325 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id GLY _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 81 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id GLY _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 328 # _pdbx_entry_details.entry_id 7IMW _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 248 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GOL C1 C N N 123 GOL O1 O N N 124 GOL C2 C N N 125 GOL O2 O N N 126 GOL C3 C N N 127 GOL O3 O N N 128 GOL H11 H N N 129 GOL H12 H N N 130 GOL HO1 H N N 131 GOL H2 H N N 132 GOL HO2 H N N 133 GOL H31 H N N 134 GOL H32 H N N 135 GOL HO3 H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 IPA C1 C N N 183 IPA C2 C N N 184 IPA C3 C N N 185 IPA O2 O N N 186 IPA H11 H N N 187 IPA H12 H N N 188 IPA H13 H N N 189 IPA H2 H N N 190 IPA H31 H N N 191 IPA H32 H N N 192 IPA H33 H N N 193 IPA HO2 H N N 194 LEU N N N N 195 LEU CA C N S 196 LEU C C N N 197 LEU O O N N 198 LEU CB C N N 199 LEU CG C N N 200 LEU CD1 C N N 201 LEU CD2 C N N 202 LEU OXT O N N 203 LEU H H N N 204 LEU H2 H N N 205 LEU HA H N N 206 LEU HB2 H N N 207 LEU HB3 H N N 208 LEU HG H N N 209 LEU HD11 H N N 210 LEU HD12 H N N 211 LEU HD13 H N N 212 LEU HD21 H N N 213 LEU HD22 H N N 214 LEU HD23 H N N 215 LEU HXT H N N 216 LYS N N N N 217 LYS CA C N S 218 LYS C C N N 219 LYS O O N N 220 LYS CB C N N 221 LYS CG C N N 222 LYS CD C N N 223 LYS CE C N N 224 LYS NZ N N N 225 LYS OXT O N N 226 LYS H H N N 227 LYS H2 H N N 228 LYS HA H N N 229 LYS HB2 H N N 230 LYS HB3 H N N 231 LYS HG2 H N N 232 LYS HG3 H N N 233 LYS HD2 H N N 234 LYS HD3 H N N 235 LYS HE2 H N N 236 LYS HE3 H N N 237 LYS HZ1 H N N 238 LYS HZ2 H N N 239 LYS HZ3 H N N 240 LYS HXT H N N 241 MET N N N N 242 MET CA C N S 243 MET C C N N 244 MET O O N N 245 MET CB C N N 246 MET CG C N N 247 MET SD S N N 248 MET CE C N N 249 MET OXT O N N 250 MET H H N N 251 MET H2 H N N 252 MET HA H N N 253 MET HB2 H N N 254 MET HB3 H N N 255 MET HG2 H N N 256 MET HG3 H N N 257 MET HE1 H N N 258 MET HE2 H N N 259 MET HE3 H N N 260 MET HXT H N N 261 PEG C1 C N N 262 PEG O1 O N N 263 PEG C2 C N N 264 PEG O2 O N N 265 PEG C3 C N N 266 PEG C4 C N N 267 PEG O4 O N N 268 PEG H11 H N N 269 PEG H12 H N N 270 PEG HO1 H N N 271 PEG H21 H N N 272 PEG H22 H N N 273 PEG H31 H N N 274 PEG H32 H N N 275 PEG H41 H N N 276 PEG H42 H N N 277 PEG HO4 H N N 278 PHE N N N N 279 PHE CA C N S 280 PHE C C N N 281 PHE O O N N 282 PHE CB C N N 283 PHE CG C Y N 284 PHE CD1 C Y N 285 PHE CD2 C Y N 286 PHE CE1 C Y N 287 PHE CE2 C Y N 288 PHE CZ C Y N 289 PHE OXT O N N 290 PHE H H N N 291 PHE H2 H N N 292 PHE HA H N N 293 PHE HB2 H N N 294 PHE HB3 H N N 295 PHE HD1 H N N 296 PHE HD2 H N N 297 PHE HE1 H N N 298 PHE HE2 H N N 299 PHE HZ H N N 300 PHE HXT H N N 301 PRO N N N N 302 PRO CA C N S 303 PRO C C N N 304 PRO O O N N 305 PRO CB C N N 306 PRO CG C N N 307 PRO CD C N N 308 PRO OXT O N N 309 PRO H H N N 310 PRO HA H N N 311 PRO HB2 H N N 312 PRO HB3 H N N 313 PRO HG2 H N N 314 PRO HG3 H N N 315 PRO HD2 H N N 316 PRO HD3 H N N 317 PRO HXT H N N 318 SER N N N N 319 SER CA C N S 320 SER C C N N 321 SER O O N N 322 SER CB C N N 323 SER OG O N N 324 SER OXT O N N 325 SER H H N N 326 SER H2 H N N 327 SER HA H N N 328 SER HB2 H N N 329 SER HB3 H N N 330 SER HG H N N 331 SER HXT H N N 332 THR N N N N 333 THR CA C N S 334 THR C C N N 335 THR O O N N 336 THR CB C N R 337 THR OG1 O N N 338 THR CG2 C N N 339 THR OXT O N N 340 THR H H N N 341 THR H2 H N N 342 THR HA H N N 343 THR HB H N N 344 THR HG1 H N N 345 THR HG21 H N N 346 THR HG22 H N N 347 THR HG23 H N N 348 THR HXT H N N 349 TRP N N N N 350 TRP CA C N S 351 TRP C C N N 352 TRP O O N N 353 TRP CB C N N 354 TRP CG C Y N 355 TRP CD1 C Y N 356 TRP CD2 C Y N 357 TRP NE1 N Y N 358 TRP CE2 C Y N 359 TRP CE3 C Y N 360 TRP CZ2 C Y N 361 TRP CZ3 C Y N 362 TRP CH2 C Y N 363 TRP OXT O N N 364 TRP H H N N 365 TRP H2 H N N 366 TRP HA H N N 367 TRP HB2 H N N 368 TRP HB3 H N N 369 TRP HD1 H N N 370 TRP HE1 H N N 371 TRP HE3 H N N 372 TRP HZ2 H N N 373 TRP HZ3 H N N 374 TRP HH2 H N N 375 TRP HXT H N N 376 TVP O O N N 377 TVP C11 C N N 378 TVP C12 C N N 379 TVP N N N N 380 TVP C2 C N S 381 TVP C1 C N N 382 TVP C10 C Y N 383 TVP C5 C Y N 384 TVP C4 C N N 385 TVP C3 C N N 386 TVP C9 C Y N 387 TVP C8 C Y N 388 TVP C7 C Y N 389 TVP C6 C Y N 390 TVP H121 H N N 391 TVP H122 H N N 392 TVP H123 H N N 393 TVP H2 H N N 394 TVP H11C H N N 395 TVP H12C H N N 396 TVP H13C H N N 397 TVP H31C H N N 398 TVP H32C H N N 399 TVP H9 H N N 400 TVP H41C H N N 401 TVP H42C H N N 402 TVP H6 H N N 403 TVP H8 H N N 404 TVP H7 H N N 405 TYR N N N N 406 TYR CA C N S 407 TYR C C N N 408 TYR O O N N 409 TYR CB C N N 410 TYR CG C Y N 411 TYR CD1 C Y N 412 TYR CD2 C Y N 413 TYR CE1 C Y N 414 TYR CE2 C Y N 415 TYR CZ C Y N 416 TYR OH O N N 417 TYR OXT O N N 418 TYR H H N N 419 TYR H2 H N N 420 TYR HA H N N 421 TYR HB2 H N N 422 TYR HB3 H N N 423 TYR HD1 H N N 424 TYR HD2 H N N 425 TYR HE1 H N N 426 TYR HE2 H N N 427 TYR HH H N N 428 TYR HXT H N N 429 VAL N N N N 430 VAL CA C N S 431 VAL C C N N 432 VAL O O N N 433 VAL CB C N N 434 VAL CG1 C N N 435 VAL CG2 C N N 436 VAL OXT O N N 437 VAL H H N N 438 VAL H2 H N N 439 VAL HA H N N 440 VAL HB H N N 441 VAL HG11 H N N 442 VAL HG12 H N N 443 VAL HG13 H N N 444 VAL HG21 H N N 445 VAL HG22 H N N 446 VAL HG23 H N N 447 VAL HXT H N N 448 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 IPA C1 C2 sing N N 173 IPA C1 H11 sing N N 174 IPA C1 H12 sing N N 175 IPA C1 H13 sing N N 176 IPA C2 C3 sing N N 177 IPA C2 O2 sing N N 178 IPA C2 H2 sing N N 179 IPA C3 H31 sing N N 180 IPA C3 H32 sing N N 181 IPA C3 H33 sing N N 182 IPA O2 HO2 sing N N 183 LEU N CA sing N N 184 LEU N H sing N N 185 LEU N H2 sing N N 186 LEU CA C sing N N 187 LEU CA CB sing N N 188 LEU CA HA sing N N 189 LEU C O doub N N 190 LEU C OXT sing N N 191 LEU CB CG sing N N 192 LEU CB HB2 sing N N 193 LEU CB HB3 sing N N 194 LEU CG CD1 sing N N 195 LEU CG CD2 sing N N 196 LEU CG HG sing N N 197 LEU CD1 HD11 sing N N 198 LEU CD1 HD12 sing N N 199 LEU CD1 HD13 sing N N 200 LEU CD2 HD21 sing N N 201 LEU CD2 HD22 sing N N 202 LEU CD2 HD23 sing N N 203 LEU OXT HXT sing N N 204 LYS N CA sing N N 205 LYS N H sing N N 206 LYS N H2 sing N N 207 LYS CA C sing N N 208 LYS CA CB sing N N 209 LYS CA HA sing N N 210 LYS C O doub N N 211 LYS C OXT sing N N 212 LYS CB CG sing N N 213 LYS CB HB2 sing N N 214 LYS CB HB3 sing N N 215 LYS CG CD sing N N 216 LYS CG HG2 sing N N 217 LYS CG HG3 sing N N 218 LYS CD CE sing N N 219 LYS CD HD2 sing N N 220 LYS CD HD3 sing N N 221 LYS CE NZ sing N N 222 LYS CE HE2 sing N N 223 LYS CE HE3 sing N N 224 LYS NZ HZ1 sing N N 225 LYS NZ HZ2 sing N N 226 LYS NZ HZ3 sing N N 227 LYS OXT HXT sing N N 228 MET N CA sing N N 229 MET N H sing N N 230 MET N H2 sing N N 231 MET CA C sing N N 232 MET CA CB sing N N 233 MET CA HA sing N N 234 MET C O doub N N 235 MET C OXT sing N N 236 MET CB CG sing N N 237 MET CB HB2 sing N N 238 MET CB HB3 sing N N 239 MET CG SD sing N N 240 MET CG HG2 sing N N 241 MET CG HG3 sing N N 242 MET SD CE sing N N 243 MET CE HE1 sing N N 244 MET CE HE2 sing N N 245 MET CE HE3 sing N N 246 MET OXT HXT sing N N 247 PEG C1 O1 sing N N 248 PEG C1 C2 sing N N 249 PEG C1 H11 sing N N 250 PEG C1 H12 sing N N 251 PEG O1 HO1 sing N N 252 PEG C2 O2 sing N N 253 PEG C2 H21 sing N N 254 PEG C2 H22 sing N N 255 PEG O2 C3 sing N N 256 PEG C3 C4 sing N N 257 PEG C3 H31 sing N N 258 PEG C3 H32 sing N N 259 PEG C4 O4 sing N N 260 PEG C4 H41 sing N N 261 PEG C4 H42 sing N N 262 PEG O4 HO4 sing N N 263 PHE N CA sing N N 264 PHE N H sing N N 265 PHE N H2 sing N N 266 PHE CA C sing N N 267 PHE CA CB sing N N 268 PHE CA HA sing N N 269 PHE C O doub N N 270 PHE C OXT sing N N 271 PHE CB CG sing N N 272 PHE CB HB2 sing N N 273 PHE CB HB3 sing N N 274 PHE CG CD1 doub Y N 275 PHE CG CD2 sing Y N 276 PHE CD1 CE1 sing Y N 277 PHE CD1 HD1 sing N N 278 PHE CD2 CE2 doub Y N 279 PHE CD2 HD2 sing N N 280 PHE CE1 CZ doub Y N 281 PHE CE1 HE1 sing N N 282 PHE CE2 CZ sing Y N 283 PHE CE2 HE2 sing N N 284 PHE CZ HZ sing N N 285 PHE OXT HXT sing N N 286 PRO N CA sing N N 287 PRO N CD sing N N 288 PRO N H sing N N 289 PRO CA C sing N N 290 PRO CA CB sing N N 291 PRO CA HA sing N N 292 PRO C O doub N N 293 PRO C OXT sing N N 294 PRO CB CG sing N N 295 PRO CB HB2 sing N N 296 PRO CB HB3 sing N N 297 PRO CG CD sing N N 298 PRO CG HG2 sing N N 299 PRO CG HG3 sing N N 300 PRO CD HD2 sing N N 301 PRO CD HD3 sing N N 302 PRO OXT HXT sing N N 303 SER N CA sing N N 304 SER N H sing N N 305 SER N H2 sing N N 306 SER CA C sing N N 307 SER CA CB sing N N 308 SER CA HA sing N N 309 SER C O doub N N 310 SER C OXT sing N N 311 SER CB OG sing N N 312 SER CB HB2 sing N N 313 SER CB HB3 sing N N 314 SER OG HG sing N N 315 SER OXT HXT sing N N 316 THR N CA sing N N 317 THR N H sing N N 318 THR N H2 sing N N 319 THR CA C sing N N 320 THR CA CB sing N N 321 THR CA HA sing N N 322 THR C O doub N N 323 THR C OXT sing N N 324 THR CB OG1 sing N N 325 THR CB CG2 sing N N 326 THR CB HB sing N N 327 THR OG1 HG1 sing N N 328 THR CG2 HG21 sing N N 329 THR CG2 HG22 sing N N 330 THR CG2 HG23 sing N N 331 THR OXT HXT sing N N 332 TRP N CA sing N N 333 TRP N H sing N N 334 TRP N H2 sing N N 335 TRP CA C sing N N 336 TRP CA CB sing N N 337 TRP CA HA sing N N 338 TRP C O doub N N 339 TRP C OXT sing N N 340 TRP CB CG sing N N 341 TRP CB HB2 sing N N 342 TRP CB HB3 sing N N 343 TRP CG CD1 doub Y N 344 TRP CG CD2 sing Y N 345 TRP CD1 NE1 sing Y N 346 TRP CD1 HD1 sing N N 347 TRP CD2 CE2 doub Y N 348 TRP CD2 CE3 sing Y N 349 TRP NE1 CE2 sing Y N 350 TRP NE1 HE1 sing N N 351 TRP CE2 CZ2 sing Y N 352 TRP CE3 CZ3 doub Y N 353 TRP CE3 HE3 sing N N 354 TRP CZ2 CH2 doub Y N 355 TRP CZ2 HZ2 sing N N 356 TRP CZ3 CH2 sing Y N 357 TRP CZ3 HZ3 sing N N 358 TRP CH2 HH2 sing N N 359 TRP OXT HXT sing N N 360 TVP O C11 doub N N 361 TVP C11 C12 sing N N 362 TVP C11 N sing N N 363 TVP N C2 sing N N 364 TVP N C10 sing N N 365 TVP C2 C1 sing N N 366 TVP C2 C3 sing N N 367 TVP C10 C5 sing Y N 368 TVP C10 C9 doub Y N 369 TVP C5 C4 sing N N 370 TVP C5 C6 doub Y N 371 TVP C4 C3 sing N N 372 TVP C9 C8 sing Y N 373 TVP C8 C7 doub Y N 374 TVP C7 C6 sing Y N 375 TVP C12 H121 sing N N 376 TVP C12 H122 sing N N 377 TVP C12 H123 sing N N 378 TVP C2 H2 sing N N 379 TVP C1 H11C sing N N 380 TVP C1 H12C sing N N 381 TVP C1 H13C sing N N 382 TVP C3 H31C sing N N 383 TVP C3 H32C sing N N 384 TVP C9 H9 sing N N 385 TVP C4 H41C sing N N 386 TVP C4 H42C sing N N 387 TVP C6 H6 sing N N 388 TVP C8 H8 sing N N 389 TVP C7 H7 sing N N 390 TYR N CA sing N N 391 TYR N H sing N N 392 TYR N H2 sing N N 393 TYR CA C sing N N 394 TYR CA CB sing N N 395 TYR CA HA sing N N 396 TYR C O doub N N 397 TYR C OXT sing N N 398 TYR CB CG sing N N 399 TYR CB HB2 sing N N 400 TYR CB HB3 sing N N 401 TYR CG CD1 doub Y N 402 TYR CG CD2 sing Y N 403 TYR CD1 CE1 sing Y N 404 TYR CD1 HD1 sing N N 405 TYR CD2 CE2 doub Y N 406 TYR CD2 HD2 sing N N 407 TYR CE1 CZ doub Y N 408 TYR CE1 HE1 sing N N 409 TYR CE2 CZ sing Y N 410 TYR CE2 HE2 sing N N 411 TYR CZ OH sing N N 412 TYR OH HH sing N N 413 TYR OXT HXT sing N N 414 VAL N CA sing N N 415 VAL N H sing N N 416 VAL N H2 sing N N 417 VAL CA C sing N N 418 VAL CA CB sing N N 419 VAL CA HA sing N N 420 VAL C O doub N N 421 VAL C OXT sing N N 422 VAL CB CG1 sing N N 423 VAL CB CG2 sing N N 424 VAL CB HB sing N N 425 VAL CG1 HG11 sing N N 426 VAL CG1 HG12 sing N N 427 VAL CG1 HG13 sing N N 428 VAL CG2 HG21 sing N N 429 VAL CG2 HG22 sing N N 430 VAL CG2 HG23 sing N N 431 VAL OXT HXT sing N N 432 # _pdbx_deposit_group.group_id G_1002353 _pdbx_deposit_group.group_description 'Crystallographic fragment screening of SARS-CoV-2 nucleocapsid protein (CTD)' _pdbx_deposit_group.group_title 'Group deposition for crystallographic fragment screening of SARS-CoV-2 nucleocapsid protein (CTD)' _pdbx_deposit_group.group_type 'changed state' # _pdbx_initial_refinement_model.accession_code 6YUN _pdbx_initial_refinement_model.details ? _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.type 'experimental model' # _atom_sites.entry_id 7IMW _atom_sites.fract_transf_matrix[1][1] 0.011323 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011323 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024594 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ #