HEADER IMMUNE SYSTEM 17-JUL-20 7JFM TITLE CRYSTAL STRUCTURE OF MOUSE PHOSPHORYLATED IRF-3 BOUND TO CBP COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERFERON REGULATORY FACTOR 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: IRF-3; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CREB-BINDING PROTEIN; COMPND 8 CHAIN: C, D; COMPND 9 EC: 2.3.1.48; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: IRF3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CREBBP, CBP; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRANSCRIPTION FACTOR, PHOSPHORYLATION, INNATE IMMUNITY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.LI,T.JING,B.ZHAO REVDAT 3 18-OCT-23 7JFM 1 REMARK REVDAT 2 07-OCT-20 7JFM 1 JRNL REVDAT 1 09-SEP-20 7JFM 0 JRNL AUTH T.JING,B.ZHAO,P.XU,X.GAO,L.CHI,H.HAN,B.SANKARAN,P.LI JRNL TITL THE STRUCTURAL BASIS OF IRF-3 ACTIVATION UPON JRNL TITL 2 PHOSPHORYLATION. JRNL REF J IMMUNOL. V. 205 1886 2020 JRNL REFN ESSN 1550-6606 JRNL PMID 32826280 JRNL DOI 10.4049/JIMMUNOL.2000026 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17_3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28389 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1408 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.4400 - 4.8100 0.99 2752 126 0.1911 0.2121 REMARK 3 2 4.8000 - 3.8100 1.00 2698 165 0.2014 0.2169 REMARK 3 3 3.8100 - 3.3300 1.00 2721 139 0.2248 0.2502 REMARK 3 4 3.3300 - 3.0300 1.00 2707 111 0.2668 0.2890 REMARK 3 5 3.0300 - 2.8100 1.00 2706 151 0.2931 0.3097 REMARK 3 6 2.8100 - 2.6400 1.00 2652 151 0.3228 0.2980 REMARK 3 7 2.6400 - 2.5100 1.00 2667 164 0.3175 0.3787 REMARK 3 8 2.5100 - 2.4000 1.00 2672 158 0.3573 0.4124 REMARK 3 9 2.4000 - 2.3100 1.00 2690 130 0.3470 0.3994 REMARK 3 10 2.3100 - 2.2300 1.00 2716 113 0.3785 0.4085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 91.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5094 -5.6798 -26.5271 REMARK 3 T TENSOR REMARK 3 T11: 0.4333 T22: 0.6985 REMARK 3 T33: 0.5453 T12: 0.0518 REMARK 3 T13: -0.0123 T23: -0.1995 REMARK 3 L TENSOR REMARK 3 L11: 4.7683 L22: 5.0234 REMARK 3 L33: 6.7312 L12: 1.1810 REMARK 3 L13: -2.4013 L23: -3.2864 REMARK 3 S TENSOR REMARK 3 S11: 0.2521 S12: 0.7095 S13: 0.0704 REMARK 3 S21: -0.5398 S22: -0.2733 S23: 0.0242 REMARK 3 S31: 0.0065 S32: 0.0329 S33: 0.0250 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 311 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0154 6.9290 -15.3591 REMARK 3 T TENSOR REMARK 3 T11: 0.4713 T22: 0.4765 REMARK 3 T33: 0.6979 T12: 0.0568 REMARK 3 T13: 0.1462 T23: -0.0793 REMARK 3 L TENSOR REMARK 3 L11: 3.1570 L22: 1.8789 REMARK 3 L33: 2.2331 L12: 0.5423 REMARK 3 L13: 0.3677 L23: -1.5764 REMARK 3 S TENSOR REMARK 3 S11: 0.2979 S12: 0.4180 S13: 0.6433 REMARK 3 S21: 0.3442 S22: 0.0374 S23: 0.2665 REMARK 3 S31: -0.5388 S32: -0.1001 S33: -0.3216 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2066 THROUGH 2070 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.3028 24.7139 -18.5545 REMARK 3 T TENSOR REMARK 3 T11: 0.9445 T22: 1.3278 REMARK 3 T33: 1.4727 T12: -0.0440 REMARK 3 T13: -0.0378 T23: 0.2437 REMARK 3 L TENSOR REMARK 3 L11: 5.1053 L22: 1.4863 REMARK 3 L33: 2.6999 L12: -2.7030 REMARK 3 L13: 3.7135 L23: -1.9540 REMARK 3 S TENSOR REMARK 3 S11: -0.5715 S12: 0.9916 S13: 1.7221 REMARK 3 S21: 0.0946 S22: -0.5270 S23: -1.0306 REMARK 3 S31: -0.9676 S32: 1.0221 S33: 1.0305 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2071 THROUGH 2079 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.8482 13.3180 -13.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.9203 T22: 0.9431 REMARK 3 T33: 0.9555 T12: -0.1042 REMARK 3 T13: -0.0897 T23: 0.1397 REMARK 3 L TENSOR REMARK 3 L11: 6.9065 L22: 2.7955 REMARK 3 L33: 1.7456 L12: -2.3127 REMARK 3 L13: 1.0512 L23: 1.4405 REMARK 3 S TENSOR REMARK 3 S11: -0.3280 S12: 0.5120 S13: 0.5335 REMARK 3 S21: 0.1904 S22: -0.0514 S23: -0.6996 REMARK 3 S31: -0.4268 S32: 0.2265 S33: 0.3229 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2080 THROUGH 2091 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.4465 15.9534 -24.8982 REMARK 3 T TENSOR REMARK 3 T11: 0.8274 T22: 1.0954 REMARK 3 T33: 1.1327 T12: -0.0105 REMARK 3 T13: 0.1712 T23: 0.1101 REMARK 3 L TENSOR REMARK 3 L11: 4.1199 L22: 5.2470 REMARK 3 L33: 3.3917 L12: -3.9761 REMARK 3 L13: 3.1103 L23: -1.8036 REMARK 3 S TENSOR REMARK 3 S11: 0.2018 S12: 1.8141 S13: 0.3690 REMARK 3 S21: -0.7873 S22: -1.0889 S23: -0.4858 REMARK 3 S31: -0.0725 S32: 1.2114 S33: 0.5054 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2092 THROUGH 2104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.7349 26.2199 -19.2984 REMARK 3 T TENSOR REMARK 3 T11: 1.1531 T22: 0.5975 REMARK 3 T33: 1.3955 T12: -0.0536 REMARK 3 T13: -0.0810 T23: 0.0862 REMARK 3 L TENSOR REMARK 3 L11: 8.6426 L22: 4.6731 REMARK 3 L33: 7.5134 L12: -3.9003 REMARK 3 L13: -0.2922 L23: 1.6276 REMARK 3 S TENSOR REMARK 3 S11: -0.4464 S12: 0.1684 S13: 2.2650 REMARK 3 S21: 0.2668 S22: 0.6682 S23: -0.7732 REMARK 3 S31: -1.1049 S32: 0.5972 S33: 0.1944 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 195 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.5880 -5.6596 1.5110 REMARK 3 T TENSOR REMARK 3 T11: 0.5887 T22: 0.9755 REMARK 3 T33: 0.7122 T12: 0.2201 REMARK 3 T13: -0.1393 T23: -0.2476 REMARK 3 L TENSOR REMARK 3 L11: 5.5237 L22: 5.6826 REMARK 3 L33: 6.2616 L12: 1.2750 REMARK 3 L13: -2.1132 L23: -1.7084 REMARK 3 S TENSOR REMARK 3 S11: 0.1075 S12: -0.5131 S13: -0.1607 REMARK 3 S21: 0.2434 S22: 0.1024 S23: -1.5235 REMARK 3 S31: 0.0739 S32: 1.6224 S33: 0.1204 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 215 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.2400 -4.8128 13.1392 REMARK 3 T TENSOR REMARK 3 T11: 0.9299 T22: 1.9062 REMARK 3 T33: 0.6248 T12: 0.1434 REMARK 3 T13: -0.3154 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 6.4480 L22: 2.1487 REMARK 3 L33: 8.3875 L12: -1.5138 REMARK 3 L13: -1.1193 L23: -3.5670 REMARK 3 S TENSOR REMARK 3 S11: 0.4352 S12: -1.3973 S13: 0.0384 REMARK 3 S21: 1.6380 S22: -0.4991 S23: -1.4102 REMARK 3 S31: 0.2661 S32: 1.8759 S33: 0.0190 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 228 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.5546 7.3698 6.1385 REMARK 3 T TENSOR REMARK 3 T11: 0.8245 T22: 0.9716 REMARK 3 T33: 0.8182 T12: -0.1778 REMARK 3 T13: -0.0135 T23: -0.3945 REMARK 3 L TENSOR REMARK 3 L11: 6.3395 L22: 6.4149 REMARK 3 L33: 7.9680 L12: 0.2312 REMARK 3 L13: -1.0543 L23: -2.5561 REMARK 3 S TENSOR REMARK 3 S11: 0.2691 S12: -1.1544 S13: 0.6796 REMARK 3 S21: 1.3141 S22: 0.1435 S23: -0.6680 REMARK 3 S31: -0.7917 S32: 0.9767 S33: -0.3384 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 261 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.8887 -9.8943 15.0253 REMARK 3 T TENSOR REMARK 3 T11: 0.9653 T22: 1.0491 REMARK 3 T33: 0.5325 T12: 0.2845 REMARK 3 T13: -0.1664 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 7.0933 L22: 5.4070 REMARK 3 L33: 6.6654 L12: 1.7090 REMARK 3 L13: -1.9118 L23: -1.9000 REMARK 3 S TENSOR REMARK 3 S11: 0.4790 S12: -1.7054 S13: -0.6627 REMARK 3 S21: 1.1427 S22: -0.2596 S23: -0.7561 REMARK 3 S31: 1.0919 S32: 0.9891 S33: 0.0034 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 279 THROUGH 299 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2123 -4.8112 3.7269 REMARK 3 T TENSOR REMARK 3 T11: 0.7224 T22: 0.6310 REMARK 3 T33: 0.6319 T12: -0.0685 REMARK 3 T13: -0.0136 T23: -0.1848 REMARK 3 L TENSOR REMARK 3 L11: 8.1036 L22: 4.7871 REMARK 3 L33: 5.7623 L12: 0.5926 REMARK 3 L13: -0.7795 L23: -2.3672 REMARK 3 S TENSOR REMARK 3 S11: 0.4062 S12: -0.1394 S13: -0.5845 REMARK 3 S21: 0.5930 S22: -0.4439 S23: 0.0144 REMARK 3 S31: -0.1518 S32: 0.3205 S33: -0.3042 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 300 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.3313 -9.2274 13.9728 REMARK 3 T TENSOR REMARK 3 T11: 0.9462 T22: 0.7267 REMARK 3 T33: 0.5470 T12: 0.1086 REMARK 3 T13: 0.0377 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 8.9435 L22: 9.7027 REMARK 3 L33: 1.9232 L12: -3.0824 REMARK 3 L13: -2.7376 L23: -2.1117 REMARK 3 S TENSOR REMARK 3 S11: -0.5698 S12: -1.8934 S13: -0.0237 REMARK 3 S21: 1.9477 S22: 0.9177 S23: -0.3204 REMARK 3 S31: 0.2176 S32: 0.5698 S33: -0.2166 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 315 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.6646 -19.6972 0.5244 REMARK 3 T TENSOR REMARK 3 T11: 0.9325 T22: 0.3430 REMARK 3 T33: 0.8321 T12: 0.1103 REMARK 3 T13: 0.0277 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 4.1363 L22: 8.2056 REMARK 3 L33: 1.6502 L12: 0.0268 REMARK 3 L13: -2.6134 L23: -0.9346 REMARK 3 S TENSOR REMARK 3 S11: -0.6587 S12: -0.1175 S13: -1.0685 REMARK 3 S21: -0.2837 S22: -0.0480 S23: 0.3309 REMARK 3 S31: 1.1399 S32: -0.0721 S33: 0.2917 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 342 THROUGH 355 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2651 2.3705 -0.9712 REMARK 3 T TENSOR REMARK 3 T11: 0.5232 T22: 0.5321 REMARK 3 T33: 0.5660 T12: -0.0555 REMARK 3 T13: 0.1111 T23: -0.0600 REMARK 3 L TENSOR REMARK 3 L11: 3.4464 L22: 6.3144 REMARK 3 L33: 8.7322 L12: -0.7864 REMARK 3 L13: -2.8081 L23: 1.0250 REMARK 3 S TENSOR REMARK 3 S11: 0.5183 S12: 0.0454 S13: 0.4394 REMARK 3 S21: 0.0617 S22: 0.3853 S23: 0.1212 REMARK 3 S31: -0.9376 S32: -0.1382 S33: -0.7923 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 356 THROUGH 390 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.1661 -18.2315 -10.5774 REMARK 3 T TENSOR REMARK 3 T11: 0.8768 T22: 0.4674 REMARK 3 T33: 0.7952 T12: -0.1304 REMARK 3 T13: 0.0530 T23: -0.1461 REMARK 3 L TENSOR REMARK 3 L11: 1.3644 L22: 3.0225 REMARK 3 L33: 6.2562 L12: -1.4184 REMARK 3 L13: -1.9120 L23: 1.6253 REMARK 3 S TENSOR REMARK 3 S11: -0.4469 S12: -0.1476 S13: -0.8171 REMARK 3 S21: -0.3907 S22: 0.6374 S23: -0.2691 REMARK 3 S31: 1.3986 S32: -0.2880 S33: -0.0100 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 2067 THROUGH 2079 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.6115 -29.8809 -3.2210 REMARK 3 T TENSOR REMARK 3 T11: 1.7873 T22: 1.1026 REMARK 3 T33: 1.9066 T12: 0.1063 REMARK 3 T13: -0.4959 T23: 0.1820 REMARK 3 L TENSOR REMARK 3 L11: 6.5316 L22: 4.7604 REMARK 3 L33: 6.8584 L12: -1.9912 REMARK 3 L13: -2.7846 L23: -4.0213 REMARK 3 S TENSOR REMARK 3 S11: -0.1866 S12: 0.0278 S13: -1.3438 REMARK 3 S21: 4.2185 S22: 0.6365 S23: -3.7119 REMARK 3 S31: -1.8272 S32: -0.1783 S33: -0.2616 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 2080 THROUGH 2092 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.9601 -26.9131 6.4837 REMARK 3 T TENSOR REMARK 3 T11: 1.5350 T22: 1.6373 REMARK 3 T33: 0.9280 T12: 0.6435 REMARK 3 T13: 0.1545 T23: 0.1482 REMARK 3 L TENSOR REMARK 3 L11: 4.8094 L22: 6.5994 REMARK 3 L33: 3.3669 L12: -5.2379 REMARK 3 L13: -3.8153 L23: 3.6145 REMARK 3 S TENSOR REMARK 3 S11: -1.1962 S12: -2.1454 S13: -1.4171 REMARK 3 S21: -0.4452 S22: 0.2376 S23: -0.8582 REMARK 3 S31: 1.9700 S32: 2.8475 S33: 0.7371 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 2093 THROUGH 2106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3910 -36.1641 -1.7020 REMARK 3 T TENSOR REMARK 3 T11: 2.9231 T22: 0.1616 REMARK 3 T33: 1.6460 T12: 0.4824 REMARK 3 T13: 0.2570 T23: 0.4435 REMARK 3 L TENSOR REMARK 3 L11: 0.6005 L22: 2.5264 REMARK 3 L33: 0.3719 L12: -0.1482 REMARK 3 L13: 0.0813 L23: -0.5200 REMARK 3 S TENSOR REMARK 3 S11: 0.1282 S12: -0.0809 S13: -0.3709 REMARK 3 S21: -0.5183 S22: 0.1868 S23: 0.4434 REMARK 3 S31: 0.1212 S32: -0.1374 S33: 0.2209 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JFM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000250730. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28422 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 51.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5JEM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM CITRATE TRIBASIC AT PH REMARK 280 7.0, 12% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.11333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.05667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.11333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.05667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 181 REMARK 465 GLU A 182 REMARK 465 PHE A 183 REMARK 465 GLU A 184 REMARK 465 ASN A 185 REMARK 465 PRO A 186 REMARK 465 LEU A 187 REMARK 465 LYS A 188 REMARK 465 GLN A 189 REMARK 465 LEU A 190 REMARK 465 ASN A 389 REMARK 465 SER A 390 REMARK 465 SER C 2065 REMARK 465 THR C 2105 REMARK 465 ALA C 2106 REMARK 465 LYS C 2107 REMARK 465 TYR C 2108 REMARK 465 VAL C 2109 REMARK 465 ALA C 2110 REMARK 465 ASN C 2111 REMARK 465 SER B 181 REMARK 465 GLU B 182 REMARK 465 PHE B 183 REMARK 465 GLU B 184 REMARK 465 ASN B 185 REMARK 465 PRO B 186 REMARK 465 LEU B 187 REMARK 465 LYS B 188 REMARK 465 GLN B 189 REMARK 465 LEU B 190 REMARK 465 LEU B 191 REMARK 465 ALA B 192 REMARK 465 GLU B 193 REMARK 465 GLU B 194 REMARK 465 PRO B 232 REMARK 465 TRP B 233 REMARK 465 SER D 2065 REMARK 465 ALA D 2066 REMARK 465 SER D 2076 REMARK 465 PRO D 2077 REMARK 465 SER D 2078 REMARK 465 LYS D 2107 REMARK 465 TYR D 2108 REMARK 465 VAL D 2109 REMARK 465 ALA D 2110 REMARK 465 ASN D 2111 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 233 74.12 60.30 REMARK 500 LEU A 293 109.89 -161.89 REMARK 500 ASP A 384 83.46 -153.17 REMARK 500 LEU C2067 -56.98 61.73 REMARK 500 THR B 226 86.00 -66.90 REMARK 500 LEU B 293 112.35 -163.83 REMARK 500 ASP B 307 -167.22 -116.15 REMARK 500 PRO B 346 86.53 -69.05 REMARK 500 LEU D2074 77.37 -110.00 REMARK 500 REMARK 500 REMARK: NULL DBREF 7JFM A 184 390 UNP P70671 IRF3_MOUSE 184 390 DBREF 7JFM C 2065 2111 UNP Q92793 CBP_HUMAN 2065 2111 DBREF 7JFM B 184 390 UNP P70671 IRF3_MOUSE 184 390 DBREF 7JFM D 2065 2111 UNP Q92793 CBP_HUMAN 2065 2111 SEQADV 7JFM SER A 181 UNP P70671 EXPRESSION TAG SEQADV 7JFM GLU A 182 UNP P70671 EXPRESSION TAG SEQADV 7JFM PHE A 183 UNP P70671 EXPRESSION TAG SEQADV 7JFM SER B 181 UNP P70671 EXPRESSION TAG SEQADV 7JFM GLU B 182 UNP P70671 EXPRESSION TAG SEQADV 7JFM PHE B 183 UNP P70671 EXPRESSION TAG SEQRES 1 A 210 SER GLU PHE GLU ASN PRO LEU LYS GLN LEU LEU ALA GLU SEQRES 2 A 210 GLU GLN TRP GLU PHE GLU VAL THR ALA PHE TYR ARG GLY SEQRES 3 A 210 ARG GLN VAL PHE GLN GLN THR LEU PHE CYS PRO GLY GLY SEQRES 4 A 210 LEU ARG LEU VAL GLY SER THR ALA ASP MET THR LEU PRO SEQRES 5 A 210 TRP GLN PRO VAL THR LEU PRO ASP PRO GLU GLY PHE LEU SEQRES 6 A 210 THR ASP LYS LEU VAL LYS GLU TYR VAL GLY GLN VAL LEU SEQRES 7 A 210 LYS GLY LEU GLY ASN GLY LEU ALA LEU TRP GLN ALA GLY SEQRES 8 A 210 GLN CYS LEU TRP ALA GLN ARG LEU GLY HIS SER HIS ALA SEQRES 9 A 210 PHE TRP ALA LEU GLY GLU GLU LEU LEU PRO ASP SER GLY SEQRES 10 A 210 ARG GLY PRO ASP GLY GLU VAL HIS LYS ASP LYS ASP GLY SEQRES 11 A 210 ALA VAL PHE ASP LEU ARG PRO PHE VAL ALA ASP LEU ILE SEQRES 12 A 210 ALA PHE MET GLU GLY SER GLY HIS SER PRO ARG TYR THR SEQRES 13 A 210 LEU TRP PHE CYS MET GLY GLU MET TRP PRO GLN ASP GLN SEQRES 14 A 210 PRO TRP VAL LYS ARG LEU VAL MET VAL LYS VAL VAL PRO SEQRES 15 A 210 THR CYS LEU LYS GLU LEU LEU GLU MET ALA ARG GLU GLY SEQRES 16 A 210 GLY ALA SER SEP LEU LYS THR VAL ASP LEU HIS ILE SER SEQRES 17 A 210 ASN SER SEQRES 1 C 47 SER ALA LEU GLN ASP LEU LEU ARG THR LEU LYS SER PRO SEQRES 2 C 47 SER SER PRO GLN GLN GLN GLN GLN VAL LEU ASN ILE LEU SEQRES 3 C 47 LYS SER ASN PRO GLN LEU MET ALA ALA PHE ILE LYS GLN SEQRES 4 C 47 ARG THR ALA LYS TYR VAL ALA ASN SEQRES 1 B 210 SER GLU PHE GLU ASN PRO LEU LYS GLN LEU LEU ALA GLU SEQRES 2 B 210 GLU GLN TRP GLU PHE GLU VAL THR ALA PHE TYR ARG GLY SEQRES 3 B 210 ARG GLN VAL PHE GLN GLN THR LEU PHE CYS PRO GLY GLY SEQRES 4 B 210 LEU ARG LEU VAL GLY SER THR ALA ASP MET THR LEU PRO SEQRES 5 B 210 TRP GLN PRO VAL THR LEU PRO ASP PRO GLU GLY PHE LEU SEQRES 6 B 210 THR ASP LYS LEU VAL LYS GLU TYR VAL GLY GLN VAL LEU SEQRES 7 B 210 LYS GLY LEU GLY ASN GLY LEU ALA LEU TRP GLN ALA GLY SEQRES 8 B 210 GLN CYS LEU TRP ALA GLN ARG LEU GLY HIS SER HIS ALA SEQRES 9 B 210 PHE TRP ALA LEU GLY GLU GLU LEU LEU PRO ASP SER GLY SEQRES 10 B 210 ARG GLY PRO ASP GLY GLU VAL HIS LYS ASP LYS ASP GLY SEQRES 11 B 210 ALA VAL PHE ASP LEU ARG PRO PHE VAL ALA ASP LEU ILE SEQRES 12 B 210 ALA PHE MET GLU GLY SER GLY HIS SER PRO ARG TYR THR SEQRES 13 B 210 LEU TRP PHE CYS MET GLY GLU MET TRP PRO GLN ASP GLN SEQRES 14 B 210 PRO TRP VAL LYS ARG LEU VAL MET VAL LYS VAL VAL PRO SEQRES 15 B 210 THR CYS LEU LYS GLU LEU LEU GLU MET ALA ARG GLU GLY SEQRES 16 B 210 GLY ALA SER SEP LEU LYS THR VAL ASP LEU HIS ILE SER SEQRES 17 B 210 ASN SER SEQRES 1 D 47 SER ALA LEU GLN ASP LEU LEU ARG THR LEU LYS SER PRO SEQRES 2 D 47 SER SER PRO GLN GLN GLN GLN GLN VAL LEU ASN ILE LEU SEQRES 3 D 47 LYS SER ASN PRO GLN LEU MET ALA ALA PHE ILE LYS GLN SEQRES 4 D 47 ARG THR ALA LYS TYR VAL ALA ASN MODRES 7JFM SEP A 379 SER MODIFIED RESIDUE MODRES 7JFM SEP B 379 SER MODIFIED RESIDUE HET SEP A 379 10 HET SEP B 379 10 HETNAM SEP PHOSPHOSERINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 5 HOH *14(H2 O) HELIX 1 AA1 ASP A 240 PHE A 244 5 5 HELIX 2 AA2 ASP A 247 GLY A 260 1 14 HELIX 3 AA3 LEU A 315 GLU A 327 1 13 HELIX 4 AA4 PRO A 350 ARG A 354 5 5 HELIX 5 AA5 THR A 363 GLY A 375 1 13 HELIX 6 AA6 LEU C 2067 LEU C 2071 5 5 HELIX 7 AA7 SER C 2079 ASN C 2093 1 15 HELIX 8 AA8 ASN C 2093 GLN C 2103 1 11 HELIX 9 AA9 ASP B 240 PHE B 244 5 5 HELIX 10 AB1 ASP B 247 LEU B 261 1 15 HELIX 11 AB2 LEU B 315 GLY B 328 1 14 HELIX 12 AB3 PRO B 350 ARG B 354 5 5 HELIX 13 AB4 THR B 363 GLY B 375 1 13 HELIX 14 AB5 PRO D 2080 ASN D 2093 1 14 HELIX 15 AB6 ASN D 2093 ALA D 2106 1 14 SHEET 1 AA1 6 GLN A 208 LEU A 214 0 SHEET 2 AA1 6 PHE A 198 TYR A 204 -1 N PHE A 198 O LEU A 214 SHEET 3 AA1 6 VAL A 356 PRO A 362 -1 O LYS A 359 N THR A 201 SHEET 4 AA1 6 THR A 336 MET A 341 -1 N LEU A 337 O VAL A 360 SHEET 5 AA1 6 ALA A 284 GLY A 289 -1 N PHE A 285 O CYS A 340 SHEET 6 AA1 6 GLY A 302 GLU A 303 -1 O GLY A 302 N TRP A 286 SHEET 1 AA2 5 GLN A 234 THR A 237 0 SHEET 2 AA2 5 LEU A 220 VAL A 223 1 N ARG A 221 O VAL A 236 SHEET 3 AA2 5 LEU A 265 GLN A 269 -1 O LEU A 267 N LEU A 220 SHEET 4 AA2 5 CYS A 273 ARG A 278 -1 O GLN A 277 N ALA A 266 SHEET 5 AA2 5 ALA A 311 ASP A 314 -1 O VAL A 312 N LEU A 274 SHEET 1 AA3 6 GLN B 208 LEU B 214 0 SHEET 2 AA3 6 PHE B 198 TYR B 204 -1 N ALA B 202 O VAL B 209 SHEET 3 AA3 6 VAL B 356 PRO B 362 -1 O LYS B 359 N THR B 201 SHEET 4 AA3 6 THR B 336 MET B 341 -1 N LEU B 337 O VAL B 360 SHEET 5 AA3 6 ALA B 284 GLY B 289 -1 N PHE B 285 O CYS B 340 SHEET 6 AA3 6 GLY B 302 GLU B 303 -1 O GLY B 302 N TRP B 286 SHEET 1 AA4 5 VAL B 236 THR B 237 0 SHEET 2 AA4 5 LEU B 220 VAL B 223 1 N ARG B 221 O VAL B 236 SHEET 3 AA4 5 LEU B 265 GLN B 269 -1 O LEU B 267 N LEU B 220 SHEET 4 AA4 5 CYS B 273 ARG B 278 -1 O GLN B 277 N ALA B 266 SHEET 5 AA4 5 PHE B 313 ASP B 314 -1 O PHE B 313 N LEU B 274 LINK C SER A 378 N SEP A 379 1555 1555 1.33 LINK C SEP A 379 N LEU A 380 1555 1555 1.33 LINK C SER B 378 N SEP B 379 1555 1555 1.33 LINK C SEP B 379 N LEU B 380 1555 1555 1.33 CISPEP 1 LEU A 231 PRO A 232 0 2.74 CRYST1 118.801 118.801 72.170 90.00 90.00 120.00 P 62 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008417 0.004860 0.000000 0.00000 SCALE2 0.000000 0.009720 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013856 0.00000