HEADER UNKNOWN FUNCTION 23-JUL-20 7JIY TITLE STRUCTURE OF TRUNCATED ZEBRAFISH PARAGRANULIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GRANULIN 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 4 ORGANISM_COMMON: ZEBRAFISH; SOURCE 5 ORGANISM_TAXID: 7955 KEYWDS DISULFIDE-RICH, GROWTH FACTOR, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.TAKJOO,N.L.DALY REVDAT 2 06-NOV-24 7JIY 1 REMARK REVDAT 1 26-AUG-20 7JIY 0 JRNL AUTH R.TAKJOO,D.WILSON,P.S.BANSAL,A.LOUKAS,M.J.SMOUT,N.L.DALY JRNL TITL FOLDING OF TRUNCATED GRANULIN PEPTIDES. JRNL REF BIOMOLECULES V. 10 2020 JRNL REFN ESSN 2218-273X JRNL PMID 32781704 JRNL DOI 10.3390/BIOM10081152 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JIY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000250867. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 290 REMARK 210 PH : 3 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT PA REMARK 210 SAMPLE CONTENTS : 0.2 MM ZF-PARA_3S, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-1H COSY; 2D 1H-13C HSQC; REMARK 210 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, CCPNMR ANALYSIS REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 8 -173.41 -69.71 REMARK 500 2 PRO A 8 -175.63 -69.74 REMARK 500 3 PRO A 8 -173.93 -69.76 REMARK 500 4 PRO A 8 -174.60 -69.74 REMARK 500 5 PRO A 8 -171.27 -69.77 REMARK 500 6 PRO A 8 -174.13 -69.78 REMARK 500 7 PRO A 8 -170.57 -69.76 REMARK 500 8 PRO A 8 -175.74 -69.75 REMARK 500 9 PRO A 8 -175.67 -69.79 REMARK 500 10 PRO A 8 -175.77 -69.80 REMARK 500 11 PRO A 8 -176.04 -69.77 REMARK 500 12 PRO A 8 -170.12 -69.78 REMARK 500 13 PRO A 8 -173.51 -69.73 REMARK 500 14 PRO A 8 -176.58 -69.82 REMARK 500 15 PRO A 8 -176.15 -69.76 REMARK 500 16 PRO A 8 -174.00 -69.79 REMARK 500 17 PRO A 8 -170.54 -69.74 REMARK 500 18 PRO A 8 -175.46 -69.75 REMARK 500 19 PRO A 8 -174.13 -69.74 REMARK 500 20 PRO A 8 -175.93 -69.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30781 RELATED DB: BMRB REMARK 900 STRUCTURE OF TRUNCATED ZEBRAFISH PARAGRANULIN DBREF 7JIY A 1 24 UNP A8E5C4 A8E5C4_DANRE 119 142 SEQRES 1 A 24 CYS GLU GLY ASN PHE TYR CYS PRO ALA GLU LYS PHE CYS SEQRES 2 A 24 CYS LYS THR ARG THR GLY GLN TRP GLY CYS CYS SHEET 1 AA1 2 PHE A 12 LYS A 15 0 SHEET 2 AA1 2 TRP A 21 CYS A 24 -1 O CYS A 24 N PHE A 12 SSBOND 1 CYS A 1 CYS A 13 1555 1555 2.01 SSBOND 2 CYS A 7 CYS A 23 1555 1555 2.02 SSBOND 3 CYS A 14 CYS A 24 1555 1555 2.01 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1