HEADER HYDROLASE 28-JUL-20 7JKA TITLE M3DLH COMPND MOL_ID: 1; COMPND 2 MOLECULE: M3DLH PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALIEACEAE BACTERIUM; SOURCE 3 ORGANISM_TAXID: 2026743; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS DIENELACTONASE, HYDROLASE, PHOSPHOTRIESTERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.D.F.SCHNETTLER FERNANDEZ,E.C.CAMPBELL,F.H.HOLLFELDER REVDAT 2 18-OCT-23 7JKA 1 REMARK REVDAT 1 04-AUG-21 7JKA 0 JRNL AUTH J.D.F.SCHNETTLER FERNANDEZ,E.C.CAMPBELL,F.HOLLFELDER JRNL TITL M3DLH JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 29949 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1475 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.2700 - 3.4100 1.00 2728 122 0.1451 0.1735 REMARK 3 2 3.4100 - 2.7100 1.00 2615 152 0.1630 0.2100 REMARK 3 3 2.7100 - 2.3600 0.99 2628 128 0.1651 0.1740 REMARK 3 4 2.3600 - 2.1500 0.99 2620 122 0.1621 0.1909 REMARK 3 5 2.1500 - 1.9900 0.99 2597 131 0.1608 0.2016 REMARK 3 6 1.9900 - 1.8800 0.98 2591 126 0.1655 0.2446 REMARK 3 7 1.8800 - 1.7800 0.98 2574 142 0.1804 0.2333 REMARK 3 8 1.7800 - 1.7100 0.98 2566 124 0.1829 0.2101 REMARK 3 9 1.7100 - 1.6400 0.97 2564 135 0.1876 0.2507 REMARK 3 10 1.6400 - 1.5800 0.97 2517 146 0.2021 0.2425 REMARK 3 11 1.5800 - 1.5300 0.95 2474 147 0.2313 0.2430 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.154 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.786 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1991 REMARK 3 ANGLE : 0.975 2710 REMARK 3 CHIRALITY : 0.058 280 REMARK 3 PLANARITY : 0.006 372 REMARK 3 DIHEDRAL : 23.960 727 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0862 -15.2895 2.3011 REMARK 3 T TENSOR REMARK 3 T11: 0.1452 T22: 0.1759 REMARK 3 T33: 0.1474 T12: 0.0051 REMARK 3 T13: -0.0304 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 2.2697 L22: 6.6404 REMARK 3 L33: 3.9497 L12: 0.0893 REMARK 3 L13: 0.2244 L23: 3.0937 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: 0.1605 S13: 0.0008 REMARK 3 S21: -0.3644 S22: -0.1992 S23: 0.2680 REMARK 3 S31: -0.3207 S32: -0.2934 S33: 0.2463 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2707 -8.8275 10.3922 REMARK 3 T TENSOR REMARK 3 T11: 0.2377 T22: 0.1214 REMARK 3 T33: 0.1584 T12: -0.0388 REMARK 3 T13: -0.0260 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 2.3877 L22: 3.0242 REMARK 3 L33: 1.0350 L12: -1.0842 REMARK 3 L13: -0.0089 L23: -0.2120 REMARK 3 S TENSOR REMARK 3 S11: -0.1329 S12: 0.0317 S13: 0.3793 REMARK 3 S21: -0.3026 S22: 0.0749 S23: -0.2461 REMARK 3 S31: -0.3524 S32: 0.0650 S33: 0.0178 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4581 -19.1550 11.7984 REMARK 3 T TENSOR REMARK 3 T11: 0.0943 T22: 0.1392 REMARK 3 T33: 0.1330 T12: 0.0199 REMARK 3 T13: 0.0087 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 2.3836 L22: 2.6298 REMARK 3 L33: 3.3289 L12: 0.0685 REMARK 3 L13: 0.3562 L23: 0.5931 REMARK 3 S TENSOR REMARK 3 S11: -0.0770 S12: -0.1305 S13: -0.1429 REMARK 3 S21: 0.0073 S22: -0.0259 S23: 0.3101 REMARK 3 S31: -0.0652 S32: -0.3899 S33: 0.1009 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3736 -36.8532 8.9181 REMARK 3 T TENSOR REMARK 3 T11: 0.2665 T22: 0.1817 REMARK 3 T33: 0.2536 T12: -0.0304 REMARK 3 T13: 0.0428 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 1.7556 L22: 6.7537 REMARK 3 L33: 6.0278 L12: -1.3311 REMARK 3 L13: -0.7227 L23: 0.2512 REMARK 3 S TENSOR REMARK 3 S11: -0.3005 S12: -0.2142 S13: -0.4538 REMARK 3 S21: 0.6260 S22: 0.1896 S23: 0.7378 REMARK 3 S31: 0.3041 S32: -0.3924 S33: 0.1560 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4995 -25.7619 9.3653 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.1133 REMARK 3 T33: 0.1006 T12: 0.0040 REMARK 3 T13: 0.0107 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 0.6519 L22: 1.1948 REMARK 3 L33: 1.8505 L12: 0.1723 REMARK 3 L13: 0.4916 L23: 0.0687 REMARK 3 S TENSOR REMARK 3 S11: 0.0131 S12: 0.0835 S13: -0.0317 REMARK 3 S21: -0.0634 S22: 0.0832 S23: -0.1015 REMARK 3 S31: 0.1264 S32: 0.2165 S33: -0.0809 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6519 -30.9972 24.2418 REMARK 3 T TENSOR REMARK 3 T11: 0.1698 T22: 0.1331 REMARK 3 T33: 0.1470 T12: -0.0318 REMARK 3 T13: -0.0271 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 5.9083 L22: 3.5381 REMARK 3 L33: 4.1998 L12: 1.1828 REMARK 3 L13: -1.5640 L23: -0.8430 REMARK 3 S TENSOR REMARK 3 S11: 0.0532 S12: 0.0775 S13: -0.5684 REMARK 3 S21: -0.0494 S22: -0.0194 S23: 0.0147 REMARK 3 S31: 0.4169 S32: -0.2950 S33: -0.0656 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2940 -37.3915 21.1932 REMARK 3 T TENSOR REMARK 3 T11: 0.3217 T22: 0.1585 REMARK 3 T33: 0.1989 T12: 0.0814 REMARK 3 T13: -0.1011 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 7.5503 L22: 3.9983 REMARK 3 L33: 6.7447 L12: -2.0247 REMARK 3 L13: -1.2247 L23: 1.5799 REMARK 3 S TENSOR REMARK 3 S11: 0.2152 S12: -0.0659 S13: -0.6663 REMARK 3 S21: 0.3136 S22: 0.0535 S23: 0.0165 REMARK 3 S31: 0.8905 S32: 0.2936 S33: -0.2233 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4994 -27.3689 25.0498 REMARK 3 T TENSOR REMARK 3 T11: 0.1353 T22: 0.1092 REMARK 3 T33: 0.0983 T12: 0.0054 REMARK 3 T13: -0.0234 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 1.2880 L22: 3.0292 REMARK 3 L33: 3.3518 L12: 0.0584 REMARK 3 L13: 0.6735 L23: 0.1205 REMARK 3 S TENSOR REMARK 3 S11: 0.1802 S12: -0.0523 S13: -0.1559 REMARK 3 S21: 0.0184 S22: -0.0744 S23: 0.2891 REMARK 3 S31: 0.1267 S32: -0.2017 S33: -0.0956 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1324 -19.6994 25.2133 REMARK 3 T TENSOR REMARK 3 T11: 0.1674 T22: 0.1674 REMARK 3 T33: 0.1451 T12: 0.0012 REMARK 3 T13: -0.0171 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 2.8156 L22: 3.1715 REMARK 3 L33: 4.1710 L12: -0.8439 REMARK 3 L13: -0.7002 L23: -0.3486 REMARK 3 S TENSOR REMARK 3 S11: -0.0949 S12: 0.0508 S13: -0.1249 REMARK 3 S21: 0.0401 S22: 0.1286 S23: 0.3748 REMARK 3 S31: 0.1068 S32: -0.4189 S33: -0.0152 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JKA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000250879. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29979 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 24.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.11380 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.52590 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3F67 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA3 CIT 5.6 PH (BUFFER) 30 %W/V REMARK 280 PEG 4K (PRECIPITANT) 0.2 M NH4 ACET (SALT), VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.22250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.84000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.22250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.84000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 410 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 420 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 ALA A -11 REMARK 465 SER A -10 REMARK 465 TRP A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 PRO A -6 REMARK 465 GLN A -5 REMARK 465 PHE A -4 REMARK 465 GLU A -3 REMARK 465 LYS A -2 REMARK 465 ARG A 239 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 332 O HOH A 499 2.10 REMARK 500 O HOH A 328 O HOH A 432 2.12 REMARK 500 O HOH A 307 O HOH A 470 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 303 O HOH A 307 3555 2.10 REMARK 500 O HOH A 333 O HOH A 499 1565 2.11 REMARK 500 O HOH A 482 O HOH A 499 1565 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 119 CB CYS A 119 SG -0.162 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 119 -126.46 53.57 REMARK 500 CYS A 119 -126.17 54.43 REMARK 500 ALA A 199 -147.77 -115.15 REMARK 500 ALA A 209 -77.56 -83.61 REMARK 500 HIS A 210 -124.85 -8.85 REMARK 500 MET A 212 -122.34 40.64 REMARK 500 REMARK 500 REMARK: NULL DBREF 7JKA A -12 239 PDB 7JKA 7JKA -12 239 SEQRES 1 A 252 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 252 MET LYS HIS ARG GLU ILE ARG TYR THR ASP GLY HIS THR SEQRES 3 A 252 GLN PHE VAL GLY GLU LEU HIS TRP ASP GLU GLN GLN GLY SEQRES 4 A 252 GLY LYS CYS PRO GLY VAL VAL VAL PHE PRO GLU ALA PHE SEQRES 5 A 252 GLY LEU ASN ASP HIS ALA ARG GLU ARG ALA ARG ARG LEU SEQRES 6 A 252 ALA GLY LEU GLY TYR ALA ALA LEU ALA ALA ASP LEU HIS SEQRES 7 A 252 GLY ASP GLY ARG LEU ILE ASP ASP MET GLU GLN LEU ARG SEQRES 8 A 252 PRO ARG MET GLU GLY LEU PHE GLY ASP ARG ALA ALA TRP SEQRES 9 A 252 ARG ALA LEU ALA ARG ALA ALA LEU ASP THR LEU VAL ALA SEQRES 10 A 252 GLN PRO GLU VAL ASP ALA ASP ARG LEU ALA ALA ILE GLY SEQRES 11 A 252 PHE CYS PHE GLY GLY THR THR ALA LEU GLU LEU ALA ARG SEQRES 12 A 252 SER GLY ALA SER LEU GLY ALA ILE VAL THR PHE HIS ALA SEQRES 13 A 252 GLY LEU LEU PRO GLU LEU PRO GLU ASP ALA GLY ARG ILE SEQRES 14 A 252 ARG GLY ARG VAL LEU VAL CYS HIS GLY ALA GLU ASP PRO SEQRES 15 A 252 LEU VAL GLN LYS GLU ALA ILE ASP ALA VAL MET GLY GLU SEQRES 16 A 252 TRP ARG ARG ASP ARG VAL ASP TRP GLN PHE THR PHE TYR SEQRES 17 A 252 GLY ASN ALA ALA HIS SER PHE THR ASP PRO ALA ALA ASP SEQRES 18 A 252 ALA HIS GLY MET ALA GLY LEU ALA TYR GLU PRO LEU THR SEQRES 19 A 252 GLU ALA ARG SER TRP THR ALA MET ARG ASN LEU PHE ASP SEQRES 20 A 252 GLU VAL PHE SER ARG FORMUL 2 HOH *205(H2 O) HELIX 1 AA1 ASN A 42 LEU A 55 1 14 HELIX 2 AA2 ASP A 73 GLU A 75 5 3 HELIX 3 AA3 GLN A 76 GLY A 86 1 11 HELIX 4 AA4 ASP A 87 ALA A 104 1 18 HELIX 5 AA5 CYS A 119 SER A 131 1 13 HELIX 6 AA6 LEU A 149 ALA A 153 5 5 HELIX 7 AA7 GLN A 172 ASP A 186 1 15 HELIX 8 AA8 ASP A 204 ALA A 209 5 6 HELIX 9 AA9 GLU A 218 SER A 238 1 21 SHEET 1 AA1 8 MET A 1 THR A 9 0 SHEET 2 AA1 8 GLN A 14 ASP A 22 -1 O PHE A 15 N TYR A 8 SHEET 3 AA1 8 ALA A 58 ALA A 61 -1 O ALA A 61 N GLU A 18 SHEET 4 AA1 8 CYS A 29 PHE A 35 1 N VAL A 34 O LEU A 60 SHEET 5 AA1 8 VAL A 108 PHE A 118 1 O ASP A 109 N CYS A 29 SHEET 6 AA1 8 ALA A 137 PHE A 141 1 O PHE A 141 N GLY A 117 SHEET 7 AA1 8 ARG A 159 GLY A 165 1 O CYS A 163 N THR A 140 SHEET 8 AA1 8 TRP A 190 TYR A 195 1 O TYR A 195 N HIS A 164 CRYST1 78.445 43.680 59.645 90.00 92.71 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012748 0.000000 0.000604 0.00000 SCALE2 0.000000 0.022894 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016785 0.00000