HEADER DE NOVO PROTEIN 27-AUG-20 7JXN TITLE BETA HAIRPIN DERIVED FROM ABETA17-36 WITH AN F20CHA MUTATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMYLOID-BETA 17-36 PEPTIDE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: APP,ABPP,APPI,ALZHEIMER DISEASE AMYLOID PROTEIN,AMYLOID COMPND 5 PRECURSOR PROTEIN,AMYLOID-BETA A4 PROTEIN,CEREBRAL VASCULAR AMYLOID COMPND 6 PEPTIDE,CVAP,PREA4,PROTEASE NEXIN-II,PN-II; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS AMYLOID, OLIGOMER, ALZHEIMER'S DISEASE, BETA-HAIRPIN, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.G.KREUTZER,S.HAERIANARDAKANI,J.S.NOWICK REVDAT 2 23-DEC-20 7JXN 1 JRNL REVDAT 1 09-DEC-20 7JXN 0 JRNL AUTH S.HAERIANARDAKANI,A.G.KREUTZER,P.J.SALVESON,T.D.SAMDIN, JRNL AUTH 2 G.E.GUAGLIANONE,J.S.NOWICK JRNL TITL PHENYLALANINE MUTATION TO CYCLOHEXYLALANINE FACILITATES JRNL TITL 2 TRIANGULAR TRIMER FORMATION BY BETA-HAIRPINS DERIVED FROM A JRNL TITL 3 BETA. JRNL REF J.AM.CHEM.SOC. V. 142 20708 2020 JRNL REFN ESSN 1520-5126 JRNL PMID 33237748 JRNL DOI 10.1021/JACS.0C09281 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3908 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 14.730 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12249 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.283 REMARK 3 R VALUE (WORKING SET) : 0.277 REMARK 3 FREE R VALUE : 0.301 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1900 - 4.1600 0.90 1239 132 0.2557 0.2505 REMARK 3 2 4.1500 - 3.3000 0.90 1233 142 0.2507 0.3004 REMARK 3 3 3.3000 - 2.8800 0.90 1209 134 0.2722 0.3025 REMARK 3 4 2.8800 - 2.6200 0.91 1235 129 0.3091 0.2757 REMARK 3 5 2.6200 - 2.4300 0.90 1227 130 0.2856 0.2713 REMARK 3 6 2.4300 - 2.2900 0.90 1220 138 0.2992 0.3533 REMARK 3 7 2.2900 - 2.1800 0.90 1220 130 0.3204 0.3580 REMARK 3 8 2.1700 - 2.0800 0.90 1227 134 0.3367 0.3446 REMARK 3 9 2.0800 - 2.0000 0.89 1226 144 0.3136 0.3033 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4900 REMARK 3 OPERATOR: H,-H-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1904 26.8336 34.9598 REMARK 3 T TENSOR REMARK 3 T11: 0.0920 T22: 0.3865 REMARK 3 T33: 0.6281 T12: 0.1045 REMARK 3 T13: -0.0403 T23: 0.4271 REMARK 3 L TENSOR REMARK 3 L11: 0.0852 L22: 0.0130 REMARK 3 L33: 0.1300 L12: 0.0215 REMARK 3 L13: 0.0322 L23: -0.0239 REMARK 3 S TENSOR REMARK 3 S11: -0.0626 S12: -0.0661 S13: -0.0115 REMARK 3 S21: 0.0134 S22: 0.0303 S23: 0.0481 REMARK 3 S31: -0.0075 S32: -0.0199 S33: -0.0943 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2465 25.4668 41.9035 REMARK 3 T TENSOR REMARK 3 T11: 0.2092 T22: -0.1831 REMARK 3 T33: 0.3980 T12: -0.1708 REMARK 3 T13: 0.1227 T23: -0.0736 REMARK 3 L TENSOR REMARK 3 L11: 0.1185 L22: 2.8735 REMARK 3 L33: 0.7321 L12: -0.1893 REMARK 3 L13: 0.1862 L23: 0.7621 REMARK 3 S TENSOR REMARK 3 S11: -0.0977 S12: 0.0722 S13: -0.0772 REMARK 3 S21: -0.1686 S22: 0.0464 S23: -0.1792 REMARK 3 S31: 0.1541 S32: 0.0478 S33: 0.0237 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4885 23.0654 37.1622 REMARK 3 T TENSOR REMARK 3 T11: 0.1707 T22: 0.1696 REMARK 3 T33: 0.2842 T12: -0.0794 REMARK 3 T13: -0.0167 T23: 0.3270 REMARK 3 L TENSOR REMARK 3 L11: 1.7228 L22: 4.7793 REMARK 3 L33: 4.8197 L12: 0.7909 REMARK 3 L13: -2.1331 L23: -3.4474 REMARK 3 S TENSOR REMARK 3 S11: -0.2402 S12: 0.1920 S13: 0.1300 REMARK 3 S21: -0.4822 S22: 0.1586 S23: 0.0780 REMARK 3 S31: 0.4931 S32: -0.1401 S33: 0.0036 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3325 30.7860 82.6320 REMARK 3 T TENSOR REMARK 3 T11: 0.2849 T22: 0.1827 REMARK 3 T33: 0.4349 T12: -0.0866 REMARK 3 T13: -0.0495 T23: 0.1393 REMARK 3 L TENSOR REMARK 3 L11: 3.6679 L22: 8.3774 REMARK 3 L33: 1.5555 L12: -4.1398 REMARK 3 L13: -0.4889 L23: 1.0811 REMARK 3 S TENSOR REMARK 3 S11: -0.3851 S12: -0.1053 S13: -0.4500 REMARK 3 S21: 0.8532 S22: 0.2725 S23: 0.3060 REMARK 3 S31: 0.3732 S32: -0.0103 S33: 0.3001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 8 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.6746 18.9780 76.8397 REMARK 3 T TENSOR REMARK 3 T11: 0.0382 T22: 0.0899 REMARK 3 T33: 0.1711 T12: -0.0232 REMARK 3 T13: -0.0153 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 3.7426 L22: 5.3010 REMARK 3 L33: 3.3124 L12: -3.4470 REMARK 3 L13: -1.1310 L23: 1.9421 REMARK 3 S TENSOR REMARK 3 S11: 0.0707 S12: -0.0864 S13: -0.0115 REMARK 3 S21: 0.3909 S22: -0.1960 S23: 0.4155 REMARK 3 S31: 0.3055 S32: -0.0555 S33: 0.1811 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.3677 28.3744 64.5631 REMARK 3 T TENSOR REMARK 3 T11: 0.0091 T22: 0.2719 REMARK 3 T33: 0.6705 T12: -0.2594 REMARK 3 T13: -0.1175 T23: -0.1133 REMARK 3 L TENSOR REMARK 3 L11: 0.0979 L22: 1.0831 REMARK 3 L33: 1.7625 L12: 0.0484 REMARK 3 L13: -0.2972 L23: -1.1005 REMARK 3 S TENSOR REMARK 3 S11: -0.3782 S12: 0.5154 S13: 0.0778 REMARK 3 S21: -0.3286 S22: 0.3229 S23: -0.5293 REMARK 3 S31: -0.4500 S32: 0.7776 S33: 0.2036 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 8 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7195 17.3927 69.4052 REMARK 3 T TENSOR REMARK 3 T11: 0.3443 T22: 0.0643 REMARK 3 T33: 0.3895 T12: -0.0512 REMARK 3 T13: 0.0225 T23: -0.0580 REMARK 3 L TENSOR REMARK 3 L11: 0.5138 L22: 1.8708 REMARK 3 L33: 2.0369 L12: 0.3272 REMARK 3 L13: -0.1687 L23: 0.8647 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: 0.0070 S13: 0.1026 REMARK 3 S21: -0.0043 S22: 0.1102 S23: 0.2928 REMARK 3 S31: 0.0484 S32: -0.0804 S33: -0.1059 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 13 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7846 20.8147 71.9012 REMARK 3 T TENSOR REMARK 3 T11: 0.1092 T22: 0.1258 REMARK 3 T33: 0.2688 T12: -0.0567 REMARK 3 T13: -0.1377 T23: -0.0930 REMARK 3 L TENSOR REMARK 3 L11: 2.7727 L22: 4.6327 REMARK 3 L33: 6.0062 L12: 2.5759 REMARK 3 L13: -3.4290 L23: -2.1983 REMARK 3 S TENSOR REMARK 3 S11: -0.2010 S12: 0.1383 S13: -0.3368 REMARK 3 S21: -0.0738 S22: -0.0019 S23: -0.0871 REMARK 3 S31: -0.1184 S32: -0.2794 S33: 0.2623 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2166 31.9773 52.6188 REMARK 3 T TENSOR REMARK 3 T11: 0.1677 T22: 0.1132 REMARK 3 T33: 0.5558 T12: -0.2094 REMARK 3 T13: 0.2464 T23: 0.0546 REMARK 3 L TENSOR REMARK 3 L11: 0.0399 L22: 1.0398 REMARK 3 L33: 0.1059 L12: -0.0308 REMARK 3 L13: 0.0674 L23: -0.1057 REMARK 3 S TENSOR REMARK 3 S11: 0.0607 S12: -0.0053 S13: 0.0138 REMARK 3 S21: 0.0537 S22: 0.0251 S23: 0.0502 REMARK 3 S31: 0.0260 S32: -0.0929 S33: 0.1118 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 9 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9736 21.2481 46.9060 REMARK 3 T TENSOR REMARK 3 T11: 0.0487 T22: 0.2054 REMARK 3 T33: 0.2114 T12: 0.0487 REMARK 3 T13: 0.0760 T23: 0.0435 REMARK 3 L TENSOR REMARK 3 L11: 7.6236 L22: 4.7371 REMARK 3 L33: 3.5482 L12: 0.9967 REMARK 3 L13: -0.4876 L23: -0.9015 REMARK 3 S TENSOR REMARK 3 S11: 0.0900 S12: 0.2520 S13: -0.4622 REMARK 3 S21: -0.0994 S22: -0.3189 S23: 0.3734 REMARK 3 S31: 0.3642 S32: 0.0759 S33: 0.3271 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7JXN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-AUG-20. REMARK 100 THE DEPOSITION ID IS D_1000251512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 123.15 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12449 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 32.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 19.40 REMARK 200 R MERGE (I) : 0.01302 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS BUFFER, AMMONIUM ACETATE, AND REMARK 280 METHYL-2,4-PENTANEDIOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.49700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.49700 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.49700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 203 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 214 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 105 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 106 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 112 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 12 O HOH B 101 1.96 REMARK 500 O GLU D 8 O HOH D 201 2.02 REMARK 500 O HOH C 113 O HOH C 118 2.05 REMARK 500 O HOH A 212 O HOH D 206 2.05 REMARK 500 O HOH A 213 O HOH A 215 2.07 REMARK 500 OG SER A 12 O HOH A 201 2.10 REMARK 500 O HOH C 106 O HOH C 109 2.11 REMARK 500 OD2 ASP A 9 O HOH A 202 2.13 REMARK 500 O HOH D 205 O HOH D 206 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 212 O HOH A 215 3675 2.06 REMARK 500 O HOH A 206 O HOH B 108 4774 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 13 37.66 -96.79 REMARK 500 SER C 12 -62.43 -90.16 REMARK 500 ASN C 13 56.52 -144.23 REMARK 500 LYS C 14 -60.00 -121.86 REMARK 500 VAL D 10 103.23 -55.63 REMARK 500 SER D 12 8.77 -69.97 REMARK 500 ASN D 13 -160.21 -116.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 215 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A 216 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH B 112 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH C 118 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH D 211 DISTANCE = 10.88 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 102 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 201 O REMARK 620 2 ASP D 9 OD1 91.9 REMARK 620 N 1 DBREF 7JXN A 1 21 UNP P05067 A4_HUMAN 686 706 DBREF 7JXN B 1 21 UNP P05067 A4_HUMAN 686 706 DBREF 7JXN C 1 21 UNP P05067 A4_HUMAN 686 706 DBREF 7JXN D 1 21 UNP P05067 A4_HUMAN 686 706 SEQADV 7JXN VAL A 1 UNP P05067 GLN 686 CONFLICT SEQADV 7JXN ORN A 2 UNP P05067 LYS 687 CONFLICT SEQADV 7JXN H7V A 6 UNP P05067 PHE 691 CONFLICT SEQADV 7JXN ORN A 21 UNP P05067 MET 706 CONFLICT SEQADV 7JXN VAL B 1 UNP P05067 GLN 686 CONFLICT SEQADV 7JXN ORN B 2 UNP P05067 LYS 687 CONFLICT SEQADV 7JXN H7V B 6 UNP P05067 PHE 691 CONFLICT SEQADV 7JXN ORN B 21 UNP P05067 MET 706 CONFLICT SEQADV 7JXN VAL C 1 UNP P05067 GLN 686 CONFLICT SEQADV 7JXN ORN C 2 UNP P05067 LYS 687 CONFLICT SEQADV 7JXN H7V C 6 UNP P05067 PHE 691 CONFLICT SEQADV 7JXN ORN C 21 UNP P05067 MET 706 CONFLICT SEQADV 7JXN VAL D 1 UNP P05067 GLN 686 CONFLICT SEQADV 7JXN ORN D 2 UNP P05067 LYS 687 CONFLICT SEQADV 7JXN H7V D 6 UNP P05067 PHE 691 CONFLICT SEQADV 7JXN ORN D 21 UNP P05067 MET 706 CONFLICT SEQRES 1 A 21 VAL ORN LEU VAL PHE H7V ALA GLU ASP VAL GLY SER ASN SEQRES 2 A 21 LYS GLY ALA ILE ILE GLY LEU ORN SEQRES 1 B 21 VAL ORN LEU VAL PHE H7V ALA GLU ASP VAL GLY SER ASN SEQRES 2 B 21 LYS GLY ALA ILE ILE GLY LEU ORN SEQRES 1 C 21 VAL ORN LEU VAL PHE H7V ALA GLU ASP VAL GLY SER ASN SEQRES 2 C 21 LYS GLY ALA ILE ILE GLY LEU ORN SEQRES 1 D 21 VAL ORN LEU VAL PHE H7V ALA GLU ASP VAL GLY SER ASN SEQRES 2 D 21 LYS GLY ALA ILE ILE GLY LEU ORN HET ORN A 2 18 HET H7V A 6 29 HET ORN A 21 19 HET ORN B 2 18 HET H7V B 6 29 HET ORN B 21 19 HET ORN C 2 18 HET H7V C 6 29 HET ORN C 21 19 HET ORN D 2 18 HET H7V D 6 29 HET ORN D 21 19 HET CL A 101 1 HET NA A 102 1 HET CL D 101 1 HETNAM ORN L-ORNITHINE HETNAM H7V 3-CYCLOHEXYL-N-METHYL-L-ALANINE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 1 ORN 8(C5 H12 N2 O2) FORMUL 1 H7V 4(C10 H19 N O2) FORMUL 5 CL 2(CL 1-) FORMUL 6 NA NA 1+ FORMUL 8 HOH *57(H2 O) SHEET 1 AA1 2 PHE A 5 GLU A 8 0 SHEET 2 AA1 2 ILE A 17 LEU A 20 -1 O LEU A 20 N PHE A 5 SHEET 1 AA2 4 PHE B 5 GLU B 8 0 SHEET 2 AA2 4 ALA B 16 LEU B 20 -1 O ILE B 18 N ALA B 7 SHEET 3 AA2 4 ALA C 16 LEU C 20 -1 O ILE C 17 N ILE B 17 SHEET 4 AA2 4 PHE C 5 GLU C 8 -1 N ALA C 7 O ILE C 18 SHEET 1 AA3 2 PHE D 5 GLU D 8 0 SHEET 2 AA3 2 ILE D 17 LEU D 20 -1 O LEU D 20 N PHE D 5 LINK C VAL A 1 NE ORN A 2 1555 1555 1.38 LINK N VAL A 1 C ORN A 21 1555 1555 1.33 LINK C ORN A 2 N LEU A 3 1555 1555 1.37 LINK C PHE A 5 N H7V A 6 1555 1555 1.34 LINK C H7V A 6 N ALA A 7 1555 1555 1.33 LINK C LEU A 20 N ORN A 21 1555 1555 1.33 LINK C VAL B 1 NE ORN B 2 1555 1555 1.38 LINK N VAL B 1 C ORN B 21 1555 1555 1.33 LINK C ORN B 2 N LEU B 3 1555 1555 1.37 LINK C PHE B 5 N H7V B 6 1555 1555 1.34 LINK C H7V B 6 N ALA B 7 1555 1555 1.33 LINK C LEU B 20 N ORN B 21 1555 1555 1.33 LINK C VAL C 1 NE ORN C 2 1555 1555 1.38 LINK N VAL C 1 C ORN C 21 1555 1555 1.33 LINK C ORN C 2 N LEU C 3 1555 1555 1.37 LINK C PHE C 5 N H7V C 6 1555 1555 1.33 LINK C H7V C 6 N ALA C 7 1555 1555 1.33 LINK C LEU C 20 N ORN C 21 1555 1555 1.33 LINK C VAL D 1 NE ORN D 2 1555 1555 1.38 LINK N VAL D 1 C ORN D 21 1555 1555 1.33 LINK C ORN D 2 N LEU D 3 1555 1555 1.37 LINK C PHE D 5 N H7V D 6 1555 1555 1.33 LINK C H7V D 6 N ALA D 7 1555 1555 1.33 LINK C LEU D 20 N ORN D 21 1555 1555 1.33 LINK NA NA A 102 O HOH A 201 1555 1555 2.98 LINK NA NA A 102 OD1 ASP D 9 1555 1555 2.86 CRYST1 37.167 37.167 116.994 90.00 90.00 120.00 P 63 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026906 0.015534 0.000000 0.00000 SCALE2 0.000000 0.031068 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008547 0.00000