HEADER CELL ADHESION 08-SEP-20 7K1U TITLE CRYSTAL STRUCTURE OF SRTB-ANCHORED COLLAGEN-BINDING ADHESIN FRAGMENT TITLE 2 (RESIDUES 206-565) FROM CLOSTRIDIOIDES DIFFICILE STRAIN 630 COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLLAGEN-BINDING ADHESIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PUTATIVE CELL SURFACE PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIOIDES DIFFICILE; SOURCE 3 ORGANISM_TAXID: 272563; SOURCE 4 STRAIN: 630; SOURCE 5 GENE: CD630_03860; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: CPD KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, COLLAGEN-BINDING ADHESIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,M.ROSAS-LEMUS,G.WIERSUM,K.J.F.SATCHELL,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 09-OCT-24 7K1U 1 REMARK REVDAT 2 10-NOV-21 7K1U 1 REMARK REVDAT 1 20-OCT-21 7K1U 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,M.ROSAS-LEMUS,G.WIERSUM, JRNL AUTH 2 K.J.F.SATCHELL, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF SRTB-ANCHORED COLLAGEN-BINDING ADHESIN JRNL TITL 2 FRAGMENT (RESIDUES 206-565) FROM CLOSTRIDIOIDES DIFFICILE JRNL TITL 3 STRAIN 630 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20033 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1074 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1423 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 58 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1945 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 152 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.16000 REMARK 3 B22 (A**2) : 1.16000 REMARK 3 B33 (A**2) : -3.77000 REMARK 3 B12 (A**2) : 0.58000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.182 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.196 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1989 ; 0.006 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1858 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2689 ; 1.426 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4337 ; 0.345 ; 1.584 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 3.796 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;31.458 ;25.568 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 340 ; 9.219 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ; 8.687 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 274 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2181 ; 0.054 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 363 ; 0.052 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 292 A 345 REMARK 3 ORIGIN FOR THE GROUP (A): -2.4662 62.5424 -2.2174 REMARK 3 T TENSOR REMARK 3 T11: 0.1727 T22: 0.0529 REMARK 3 T33: 0.0430 T12: -0.0551 REMARK 3 T13: -0.0642 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.4522 L22: 1.7846 REMARK 3 L33: 2.5785 L12: 0.1863 REMARK 3 L13: -0.5141 L23: -1.7210 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: 0.0414 S13: -0.0092 REMARK 3 S21: 0.0308 S22: -0.0125 S23: 0.0052 REMARK 3 S31: -0.0448 S32: 0.0250 S33: 0.0219 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 346 A 413 REMARK 3 ORIGIN FOR THE GROUP (A): 0.3414 67.1721 -0.4224 REMARK 3 T TENSOR REMARK 3 T11: 0.1928 T22: 0.0619 REMARK 3 T33: 0.0561 T12: -0.0702 REMARK 3 T13: -0.0669 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.0792 L22: 1.8579 REMARK 3 L33: 2.1046 L12: 0.9845 REMARK 3 L13: -0.8051 L23: -0.8293 REMARK 3 S TENSOR REMARK 3 S11: 0.0173 S12: -0.0408 S13: -0.0358 REMARK 3 S21: 0.1193 S22: -0.0341 S23: -0.1254 REMARK 3 S31: -0.1163 S32: -0.0217 S33: 0.0168 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 414 A 473 REMARK 3 ORIGIN FOR THE GROUP (A): -4.8040 66.7995 -14.3170 REMARK 3 T TENSOR REMARK 3 T11: 0.2649 T22: 0.1544 REMARK 3 T33: 0.1060 T12: -0.0626 REMARK 3 T13: -0.0318 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.4686 L22: 4.5212 REMARK 3 L33: 4.1918 L12: -0.3169 REMARK 3 L13: 0.0494 L23: -4.0032 REMARK 3 S TENSOR REMARK 3 S11: -0.0645 S12: 0.0371 S13: -0.0448 REMARK 3 S21: -0.2888 S22: 0.1197 S23: -0.0591 REMARK 3 S31: 0.2513 S32: -0.3095 S33: -0.0552 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 474 A 531 REMARK 3 ORIGIN FOR THE GROUP (A): -2.9017 85.2976 -32.7761 REMARK 3 T TENSOR REMARK 3 T11: 0.1446 T22: 0.1152 REMARK 3 T33: 0.0154 T12: 0.0014 REMARK 3 T13: -0.0256 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 1.7358 L22: 2.5104 REMARK 3 L33: 4.0162 L12: -1.4874 REMARK 3 L13: 1.1305 L23: -2.2875 REMARK 3 S TENSOR REMARK 3 S11: 0.0639 S12: 0.2439 S13: 0.1125 REMARK 3 S21: 0.0978 S22: -0.2441 S23: -0.1729 REMARK 3 S31: -0.2765 S32: 0.2040 S33: 0.1802 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 532 A 561 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0473 91.0709 -27.6075 REMARK 3 T TENSOR REMARK 3 T11: 0.5102 T22: 0.1886 REMARK 3 T33: 0.0124 T12: 0.1671 REMARK 3 T13: -0.0292 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 2.6853 L22: 4.4831 REMARK 3 L33: 4.7678 L12: -0.4148 REMARK 3 L13: 2.4031 L23: -2.1283 REMARK 3 S TENSOR REMARK 3 S11: -0.1440 S12: 0.3177 S13: 0.1019 REMARK 3 S21: 0.5170 S22: 0.0306 S23: 0.0148 REMARK 3 S31: -1.2352 S32: -0.1800 S33: 0.1134 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7K1U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000251749. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21161 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.83400 REMARK 200 R SYM FOR SHELL (I) : 0.83400 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 9.3 MG/ML 0.5M SODIUM REMARK 280 CHLORIDE, 0.01M TRIS PH 8.3; SCREEN: CLASSICS II (G7), 0.2M REMARK 280 AMMONIUM ACETATE, 0.1M BIS-TRIS PH 6.5, 25% (W/V) PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.50900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 125.01800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 125.01800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 62.50900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 205 REMARK 465 LYS A 206 REMARK 465 THR A 207 REMARK 465 SER A 208 REMARK 465 SER A 209 REMARK 465 ASN A 210 REMARK 465 ALA A 211 REMARK 465 SER A 212 REMARK 465 ILE A 213 REMARK 465 THR A 214 REMARK 465 ASP A 215 REMARK 465 GLY A 216 REMARK 465 ASN A 217 REMARK 465 GLY A 218 REMARK 465 ASN A 219 REMARK 465 TYR A 220 REMARK 465 SER A 221 REMARK 465 ILE A 222 REMARK 465 ALA A 223 REMARK 465 GLY A 224 REMARK 465 ALA A 225 REMARK 465 THR A 226 REMARK 465 TYR A 227 REMARK 465 GLY A 228 REMARK 465 VAL A 229 REMARK 465 PHE A 230 REMARK 465 ALA A 231 REMARK 465 ASP A 232 REMARK 465 LYS A 233 REMARK 465 ASP A 234 REMARK 465 CYS A 235 REMARK 465 THR A 236 REMARK 465 LYS A 237 REMARK 465 GLN A 238 REMARK 465 LEU A 239 REMARK 465 ALA A 240 REMARK 465 THR A 241 REMARK 465 LEU A 242 REMARK 465 THR A 243 REMARK 465 THR A 244 REMARK 465 ASN A 245 REMARK 465 GLU A 246 REMARK 465 ASN A 247 REMARK 465 GLY A 248 REMARK 465 ASN A 249 REMARK 465 THR A 250 REMARK 465 ASP A 251 REMARK 465 VAL A 252 REMARK 465 VAL A 253 REMARK 465 GLU A 254 REMARK 465 VAL A 255 REMARK 465 THR A 256 REMARK 465 THR A 257 REMARK 465 GLY A 258 REMARK 465 THR A 259 REMARK 465 VAL A 260 REMARK 465 TYR A 261 REMARK 465 ILE A 262 REMARK 465 ARG A 263 REMARK 465 GLU A 264 REMARK 465 LEU A 265 REMARK 465 SER A 266 REMARK 465 ALA A 267 REMARK 465 PRO A 268 REMARK 465 ALA A 269 REMARK 465 GLY A 270 REMARK 465 TYR A 271 REMARK 465 LYS A 272 REMARK 465 VAL A 273 REMARK 465 ASP A 274 REMARK 465 LYS A 275 REMARK 465 THR A 276 REMARK 465 VAL A 277 REMARK 465 TYR A 278 REMARK 465 SER A 279 REMARK 465 LEU A 280 REMARK 465 LYS A 281 REMARK 465 VAL A 282 REMARK 465 GLU A 283 REMARK 465 ALA A 284 REMARK 465 GLY A 285 REMARK 465 LYS A 286 REMARK 465 THR A 287 REMARK 465 ALA A 288 REMARK 465 THR A 289 REMARK 465 LEU A 290 REMARK 465 LYS A 291 REMARK 465 ASP A 462 REMARK 465 LEU A 463 REMARK 465 GLU A 464 REMARK 465 THR A 465 REMARK 465 GLY A 466 REMARK 465 ASP A 467 REMARK 465 THR A 468 REMARK 465 LYS A 469 REMARK 465 ALA A 534 REMARK 465 PRO A 535 REMARK 465 ASN A 536 REMARK 465 GLY A 537 REMARK 465 TYR A 538 REMARK 465 LEU A 539 REMARK 465 THR A 540 REMARK 465 ASP A 541 REMARK 465 GLY A 542 REMARK 465 GLU A 562 REMARK 465 ALA A 563 REMARK 465 HIS A 564 REMARK 465 SER A 565 REMARK 465 GLY A 566 REMARK 465 ALA A 567 REMARK 465 ALA A 568 REMARK 465 LEU A 569 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 449 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 307 CG ASP A 449 1.29 REMARK 500 CE LYS A 307 CG ASP A 449 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 302 -140.27 -106.44 REMARK 500 ASP A 315 38.28 -82.59 REMARK 500 ASP A 409 118.39 -37.68 REMARK 500 LYS A 418 -11.66 66.01 REMARK 500 ASN A 501 -0.35 73.86 REMARK 500 THR A 551 -31.86 -130.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP05502.502 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: CSGID-IDP00502.502 RELATED DB: TARGETTRACK DBREF 7K1U A 206 565 UNP Q18DC3 Q18DC3_CLOD6 206 565 SEQADV 7K1U MSE A 205 UNP Q18DC3 INITIATING METHIONINE SEQADV 7K1U GLY A 566 UNP Q18DC3 EXPRESSION TAG SEQADV 7K1U ALA A 567 UNP Q18DC3 EXPRESSION TAG SEQADV 7K1U ALA A 568 UNP Q18DC3 EXPRESSION TAG SEQADV 7K1U LEU A 569 UNP Q18DC3 EXPRESSION TAG SEQRES 1 A 365 MSE LYS THR SER SER ASN ALA SER ILE THR ASP GLY ASN SEQRES 2 A 365 GLY ASN TYR SER ILE ALA GLY ALA THR TYR GLY VAL PHE SEQRES 3 A 365 ALA ASP LYS ASP CYS THR LYS GLN LEU ALA THR LEU THR SEQRES 4 A 365 THR ASN GLU ASN GLY ASN THR ASP VAL VAL GLU VAL THR SEQRES 5 A 365 THR GLY THR VAL TYR ILE ARG GLU LEU SER ALA PRO ALA SEQRES 6 A 365 GLY TYR LYS VAL ASP LYS THR VAL TYR SER LEU LYS VAL SEQRES 7 A 365 GLU ALA GLY LYS THR ALA THR LEU LYS VAL SER ASP THR SEQRES 8 A 365 PRO LYS VAL THR ASP THR LEU ILE GLU LEU PHE LYS ILE SEQRES 9 A 365 ASP MSE GLU THR GLN LYS ASP ASN PRO GLN GLY ASN ALA SEQRES 10 A 365 SER LEU ALA GLY ALA GLU PHE THR TRP LYS TYR TYR ALA SEQRES 11 A 365 GLY PHE TYR ASN LYS GLU ASN LEU PRO ALA GLU ALA THR SEQRES 12 A 365 ARG THR TRP VAL THR LYS THR ILE ALA GLU THR ASP SER SEQRES 13 A 365 ASP GLY THR THR HIS TYR ILE THR LYS LEU ALA ASP ALA SEQRES 14 A 365 TYR LYS VAL SER GLY ASP SER PHE TYR MSE GLN ASP GLY SEQRES 15 A 365 LYS ALA VAL LEU PRO LEU GLY THR LEU THR VAL GLU GLU SEQRES 16 A 365 THR LYS ALA PRO ASN GLY TYR LEU LEU ASP GLY ALA TYR SEQRES 17 A 365 MSE GLN ALA GLY ASP LYS SER GLU GLN ILE LYS GLY LEU SEQRES 18 A 365 TYR VAL THR GLN ILE THR GLU ASP GLY ASP LEU ALA VAL SEQRES 19 A 365 LEU SER GLY SER ASN GLN PHE SER VAL SER ASP LYS VAL SEQRES 20 A 365 ILE ARG GLY GLY VAL LYS ILE GLN LYS ARG ASP LEU GLU SEQRES 21 A 365 THR GLY ASP THR LYS PRO GLN GLY SER ALA THR LEU LYS SEQRES 22 A 365 ASP THR ALA PHE ASP ILE ILE SER LEU ASN ASP ASN VAL SEQRES 23 A 365 VAL LEU VAL GLU GLY LYS LEU TYR LYS LYS ASN GLU VAL SEQRES 24 A 365 VAL LYS THR ILE HIS THR ASP ILE GLU GLY VAL ALA SER SEQRES 25 A 365 THR SER ALA ASP LEU LEU PRO TYR GLY LYS PHE ARG ILE SEQRES 26 A 365 VAL GLU SER GLU ALA PRO ASN GLY TYR LEU THR ASP GLY SEQRES 27 A 365 ALA LYS PRO ILE ASP PHE ALA ILE THR GLU ASN GLY LYS SEQRES 28 A 365 ILE VAL ASP LEU THR ASP GLU ALA HIS SER GLY ALA ALA SEQRES 29 A 365 LEU MODRES 7K1U MSE A 310 MET MODIFIED RESIDUE MODRES 7K1U MSE A 383 MET MODIFIED RESIDUE MODRES 7K1U MSE A 413 MET MODIFIED RESIDUE HET MSE A 310 8 HET MSE A 383 8 HET MSE A 413 8 HET BTB A 601 14 HETNAM MSE SELENOMETHIONINE HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETSYN BTB BIS-TRIS BUFFER FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 BTB C8 H19 N O5 FORMUL 3 HOH *152(H2 O) HELIX 1 AA1 ASN A 338 LEU A 342 5 5 HELIX 2 AA2 ALA A 371 ALA A 373 5 3 SHEET 1 AA1 3 VAL A 298 THR A 299 0 SHEET 2 AA1 3 LYS A 387 PRO A 391 -1 O LEU A 390 N THR A 299 SHEET 3 AA1 3 TYR A 382 GLN A 384 -1 N TYR A 382 O VAL A 389 SHEET 1 AA2 6 ILE A 355 THR A 358 0 SHEET 2 AA2 6 THR A 364 THR A 368 -1 O HIS A 365 N GLU A 357 SHEET 3 AA2 6 GLU A 304 ASP A 309 -1 N LYS A 307 O TYR A 366 SHEET 4 AA2 6 GLN A 444 VAL A 451 1 O VAL A 447 N PHE A 306 SHEET 5 AA2 6 TYR A 406 GLN A 414 -1 N LEU A 407 O LYS A 450 SHEET 6 AA2 6 ILE A 422 LYS A 423 -1 O ILE A 422 N MSE A 413 SHEET 1 AA3 6 LYS A 375 GLY A 378 0 SHEET 2 AA3 6 ARG A 348 LYS A 353 -1 N VAL A 351 O VAL A 376 SHEET 3 AA3 6 GLU A 327 TYR A 333 -1 N TRP A 330 O TRP A 350 SHEET 4 AA3 6 GLY A 393 LYS A 401 -1 O LYS A 401 N GLU A 327 SHEET 5 AA3 6 TYR A 426 ASP A 433 -1 O THR A 428 N LEU A 395 SHEET 6 AA3 6 LEU A 436 LEU A 439 -1 O VAL A 438 N THR A 431 SHEET 1 AA4 3 ALA A 515 SER A 516 0 SHEET 2 AA4 3 ARG A 453 ILE A 458 -1 N ILE A 458 O ALA A 515 SHEET 3 AA4 3 LEU A 522 PRO A 523 -1 O LEU A 522 N GLY A 454 SHEET 1 AA5 3 ALA A 515 SER A 516 0 SHEET 2 AA5 3 ARG A 453 ILE A 458 -1 N ILE A 458 O ALA A 515 SHEET 3 AA5 3 ILE A 556 LEU A 559 1 O VAL A 557 N GLY A 455 SHEET 1 AA6 4 VAL A 503 HIS A 508 0 SHEET 2 AA6 4 ALA A 480 SER A 485 -1 N PHE A 481 O ILE A 507 SHEET 3 AA6 4 GLY A 525 GLU A 531 -1 O ARG A 528 N ILE A 484 SHEET 4 AA6 4 ILE A 546 ILE A 550 -1 O ILE A 546 N ILE A 529 SHEET 1 AA7 2 VAL A 491 VAL A 493 0 SHEET 2 AA7 2 LYS A 496 TYR A 498 -1 O LYS A 496 N VAL A 493 LINK C ASP A 309 N MSE A 310 1555 1555 1.33 LINK C MSE A 310 N GLU A 311 1555 1555 1.34 LINK C TYR A 382 N MSE A 383 1555 1555 1.34 LINK C MSE A 383 N GLN A 384 1555 1555 1.33 LINK C TYR A 412 N MSE A 413 1555 1555 1.34 LINK C MSE A 413 N GLN A 414 1555 1555 1.34 CRYST1 69.323 69.323 187.527 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014425 0.008328 0.000000 0.00000 SCALE2 0.000000 0.016657 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005333 0.00000