HEADER IMMUNE SYSTEM 12-SEP-20 7K3Q TITLE AN ULTRA-POTENT HUMAN NEUTRALIZING ANTIBODY LOCKS THE SARS-COV-2 SPIKE TITLE 2 IN THE CLOSED CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB FRAGMENT OF S2E12 MONOCLONAL ANTIBODY, HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB FRAGMENT OF S2E12 MONOCLONAL ANTIBODY, LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS SARS-COV-2, NEUTRALIZING MAB, ANTIVIRAL PROTEIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR G.SNELL,N.CZUDNOCHOWSKI,C.NG REVDAT 3 03-APR-24 7K3Q 1 REMARK REVDAT 2 02-DEC-20 7K3Q 1 JRNL REVDAT 1 07-OCT-20 7K3Q 0 JRNL AUTH M.A.TORTORICI,M.BELTRAMELLO,F.A.LEMPP,D.PINTO,H.V.DANG, JRNL AUTH 2 L.E.ROSEN,M.MCCALLUM,J.BOWEN,A.MINOLA,S.JACONI,F.ZATTA, JRNL AUTH 3 A.DE MARCO,B.GUARINO,S.BIANCHI,E.J.LAURON,H.TUCKER,J.ZHOU, JRNL AUTH 4 A.PETER,C.HAVENAR-DAUGHTON,J.A.WOJCECHOWSKYJ,J.B.CASE, JRNL AUTH 5 R.E.CHEN,H.KAISER,M.MONTIEL-RUIZ,M.MEURY,N.CZUDNOCHOWSKI, JRNL AUTH 6 R.SPREAFICO,J.DILLEN,C.NG,N.SPRUGASCI,K.CULAP,F.BENIGNI, JRNL AUTH 7 R.ABDELNABI,S.C.FOO,M.A.SCHMID,E.CAMERONI,A.RIVA,A.GABRIELI, JRNL AUTH 8 M.GALLI,M.S.PIZZUTO,J.NEYTS,M.S.DIAMOND,H.W.VIRGIN,G.SNELL, JRNL AUTH 9 D.CORTI,K.FINK,D.VEESLER JRNL TITL ULTRAPOTENT HUMAN ANTIBODIES PROTECT AGAINST SARS-COV-2 JRNL TITL 2 CHALLENGE VIA MULTIPLE MECHANISMS. JRNL REF SCIENCE V. 370 950 2020 JRNL REFN ESSN 1095-9203 JRNL PMID 32972994 JRNL DOI 10.1126/SCIENCE.ABE3354 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 84581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 4458 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.38 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6004 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.5310 REMARK 3 BIN FREE R VALUE SET COUNT : 347 REMARK 3 BIN FREE R VALUE : 0.5310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3339 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 326 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.73000 REMARK 3 B22 (A**2) : 1.63000 REMARK 3 B33 (A**2) : -0.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.065 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.063 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.673 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3500 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3138 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4781 ; 1.226 ; 1.646 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7342 ; 1.237 ; 1.568 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 466 ; 7.375 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 149 ;30.257 ;22.349 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 563 ;12.351 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;18.295 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 472 ; 0.046 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3954 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 721 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 125 REMARK 3 ORIGIN FOR THE GROUP (A): -17.834 -58.383 2.214 REMARK 3 T TENSOR REMARK 3 T11: 0.0179 T22: 0.0587 REMARK 3 T33: 0.0056 T12: -0.0063 REMARK 3 T13: -0.0049 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 1.9023 L22: 0.7727 REMARK 3 L33: 1.6937 L12: 0.6827 REMARK 3 L13: -0.6620 L23: -0.2418 REMARK 3 S TENSOR REMARK 3 S11: 0.0470 S12: -0.0821 S13: 0.0196 REMARK 3 S21: -0.0173 S22: -0.0104 S23: -0.0065 REMARK 3 S31: 0.0351 S32: 0.0556 S33: -0.0366 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 126 H 226 REMARK 3 ORIGIN FOR THE GROUP (A): 2.558 -34.335 15.921 REMARK 3 T TENSOR REMARK 3 T11: 0.0164 T22: 0.0794 REMARK 3 T33: 0.0474 T12: 0.0025 REMARK 3 T13: 0.0081 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.1750 L22: 1.2253 REMARK 3 L33: 3.1967 L12: 0.3589 REMARK 3 L13: 0.4226 L23: 1.4710 REMARK 3 S TENSOR REMARK 3 S11: 0.0016 S12: 0.1038 S13: -0.0915 REMARK 3 S21: -0.0389 S22: 0.0973 S23: -0.1541 REMARK 3 S31: -0.0670 S32: 0.1525 S33: -0.0989 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 107 REMARK 3 ORIGIN FOR THE GROUP (A): -33.245 -45.362 10.562 REMARK 3 T TENSOR REMARK 3 T11: 0.0227 T22: 0.0847 REMARK 3 T33: 0.0218 T12: 0.0081 REMARK 3 T13: 0.0018 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 1.9459 L22: 1.9354 REMARK 3 L33: 2.0494 L12: -0.4958 REMARK 3 L13: -0.6132 L23: 1.1306 REMARK 3 S TENSOR REMARK 3 S11: 0.0999 S12: 0.1232 S13: 0.0601 REMARK 3 S21: -0.1116 S22: -0.1570 S23: 0.0677 REMARK 3 S31: -0.1677 S32: -0.2050 S33: 0.0572 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 108 L 213 REMARK 3 ORIGIN FOR THE GROUP (A): -6.286 -21.913 11.376 REMARK 3 T TENSOR REMARK 3 T11: 0.0610 T22: 0.0967 REMARK 3 T33: 0.0299 T12: 0.0085 REMARK 3 T13: 0.0098 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 3.5826 L22: 1.5231 REMARK 3 L33: 1.5635 L12: 0.8549 REMARK 3 L13: -1.3281 L23: -0.2552 REMARK 3 S TENSOR REMARK 3 S11: 0.0143 S12: 0.2725 S13: 0.1738 REMARK 3 S21: -0.1820 S22: 0.0413 S23: -0.0940 REMARK 3 S31: -0.0942 S32: 0.0447 S33: -0.0556 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7K3Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000251827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89367 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 48.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 2.11500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: HOMOLOGY MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE HEXAHYDRATE, REMARK 280 0.1 M TRIS PH 8.5, 30% (W/V) PEG 4000 CONDITION A1 OF MOLECULAR REMARK 280 DIMENSIONS SG1 HT-96 ECO SCREEN, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.00700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.15300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.86100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.15300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.00700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.86100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 32 -164.51 -100.43 REMARK 500 ARG H 67 16.21 -144.80 REMARK 500 ALA L 52 -36.98 73.89 REMARK 500 REMARK 500 REMARK: NULL DBREF 7K3Q H 1 226 PDB 7K3Q 7K3Q 1 226 DBREF 7K3Q L 1 216 PDB 7K3Q 7K3Q 1 216 SEQRES 1 H 226 GLN VAL GLN LEU VAL GLN SER GLY PRO GLU VAL LYS LYS SEQRES 2 H 226 PRO GLY THR SER VAL ARG VAL SER CYS LYS ALA SER GLY SEQRES 3 H 226 PHE THR PHE THR SER SER ALA VAL GLN TRP VAL ARG GLN SEQRES 4 H 226 ALA ARG GLY GLN ARG LEU GLU TRP VAL GLY TRP ILE VAL SEQRES 5 H 226 VAL GLY SER GLY ASN THR ASN TYR ALA GLN LYS PHE HIS SEQRES 6 H 226 GLU ARG VAL THR ILE THR ARG ASP MET SER THR SER THR SEQRES 7 H 226 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 226 ALA VAL TYR TYR CYS ALA SER PRO TYR CYS SER GLY GLY SEQRES 9 H 226 SER CYS SER ASP GLY PHE ASP ILE TRP GLY GLN GLY THR SEQRES 10 H 226 MET VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER SEQRES 11 H 226 VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY SEQRES 12 H 226 GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE SEQRES 13 H 226 PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU SEQRES 14 H 226 THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SEQRES 15 H 226 SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SEQRES 16 H 226 SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL SEQRES 17 H 226 ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL SEQRES 18 H 226 GLU PRO LYS SER CYS SEQRES 1 L 216 ASP ILE VAL LEU THR GLN THR PRO GLY THR LEU SER LEU SEQRES 2 L 216 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 216 GLN SER VAL SER SER SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 L 216 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 L 216 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 216 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 L 216 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 L 216 TYR VAL GLY LEU THR GLY TRP THR PHE GLY GLN GLY THR SEQRES 9 L 216 LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 L 216 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 L 216 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 L 216 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 L 216 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 L 216 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 L 216 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 L 216 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 L 216 LYS SER PHE ASN ARG GLY GLU CYS HET GOL H 301 6 HET EDO H 302 4 HET EDO L 301 4 HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 EDO 2(C2 H6 O2) FORMUL 6 HOH *326(H2 O) HELIX 1 AA1 THR H 28 SER H 31 5 4 HELIX 2 AA2 GLN H 62 HIS H 65 5 4 HELIX 3 AA3 MET H 74 THR H 76 5 3 HELIX 4 AA4 ARG H 87 THR H 91 5 5 HELIX 5 AA5 SER H 137 LYS H 139 5 3 HELIX 6 AA6 SER H 166 ALA H 168 5 3 HELIX 7 AA7 SER H 197 LEU H 199 5 3 HELIX 8 AA8 LYS H 211 ASN H 214 5 4 HELIX 9 AA9 SER L 30 SER L 32 5 3 HELIX 10 AB1 GLU L 80 PHE L 84 5 5 HELIX 11 AB2 SER L 123 SER L 129 1 7 HELIX 12 AB3 LYS L 185 GLU L 189 1 5 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA1 4 THR H 78 LEU H 83 -1 O MET H 81 N VAL H 20 SHEET 4 AA1 4 VAL H 68 ASP H 73 -1 N THR H 69 O GLU H 82 SHEET 1 AA2 6 GLU H 10 LYS H 12 0 SHEET 2 AA2 6 THR H 117 VAL H 121 1 O THR H 120 N LYS H 12 SHEET 3 AA2 6 ALA H 92 SER H 98 -1 N TYR H 94 O THR H 117 SHEET 4 AA2 6 ALA H 33 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA2 6 GLU H 46 VAL H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 58 TYR H 60 -1 O ASN H 59 N TRP H 50 SHEET 1 AA3 4 GLU H 10 LYS H 12 0 SHEET 2 AA3 4 THR H 117 VAL H 121 1 O THR H 120 N LYS H 12 SHEET 3 AA3 4 ALA H 92 SER H 98 -1 N TYR H 94 O THR H 117 SHEET 4 AA3 4 ILE H 112 TRP H 113 -1 O ILE H 112 N SER H 98 SHEET 1 AA4 2 CYS H 101 SER H 102 0 SHEET 2 AA4 2 SER H 105 CYS H 106 -1 O SER H 105 N SER H 102 SHEET 1 AA5 4 SER H 130 LEU H 134 0 SHEET 2 AA5 4 THR H 145 TYR H 155 -1 O LYS H 153 N SER H 130 SHEET 3 AA5 4 TYR H 186 PRO H 195 -1 O TYR H 186 N TYR H 155 SHEET 4 AA5 4 VAL H 173 THR H 175 -1 N HIS H 174 O VAL H 191 SHEET 1 AA6 4 THR H 141 SER H 142 0 SHEET 2 AA6 4 THR H 145 TYR H 155 -1 O THR H 145 N SER H 142 SHEET 3 AA6 4 TYR H 186 PRO H 195 -1 O TYR H 186 N TYR H 155 SHEET 4 AA6 4 VAL H 179 LEU H 180 -1 N VAL H 179 O SER H 187 SHEET 1 AA7 3 THR H 161 TRP H 164 0 SHEET 2 AA7 3 ILE H 205 HIS H 210 -1 O ASN H 207 N SER H 163 SHEET 3 AA7 3 THR H 215 LYS H 220 -1 O VAL H 217 N VAL H 208 SHEET 1 AA8 3 LEU L 4 THR L 7 0 SHEET 2 AA8 3 ALA L 19 VAL L 29 -1 O ARG L 24 N THR L 5 SHEET 3 AA8 3 PHE L 63 ILE L 76 -1 O GLY L 69 N VAL L 29 SHEET 1 AA9 6 THR L 10 LEU L 13 0 SHEET 2 AA9 6 THR L 104 ILE L 108 1 O GLU L 107 N LEU L 11 SHEET 3 AA9 6 ALA L 85 GLN L 91 -1 N ALA L 85 O VAL L 106 SHEET 4 AA9 6 LEU L 34 GLN L 39 -1 N GLN L 39 O VAL L 86 SHEET 5 AA9 6 ARG L 46 TYR L 50 -1 O LEU L 48 N TRP L 36 SHEET 6 AA9 6 SER L 54 ARG L 55 -1 O SER L 54 N TYR L 50 SHEET 1 AB1 4 THR L 10 LEU L 13 0 SHEET 2 AB1 4 THR L 104 ILE L 108 1 O GLU L 107 N LEU L 11 SHEET 3 AB1 4 ALA L 85 GLN L 91 -1 N ALA L 85 O VAL L 106 SHEET 4 AB1 4 THR L 99 PHE L 100 -1 O THR L 99 N GLN L 91 SHEET 1 AB2 4 SER L 116 PHE L 120 0 SHEET 2 AB2 4 THR L 131 PHE L 141 -1 O LEU L 137 N PHE L 118 SHEET 3 AB2 4 TYR L 175 SER L 184 -1 O LEU L 177 N LEU L 138 SHEET 4 AB2 4 SER L 161 VAL L 165 -1 N SER L 164 O SER L 178 SHEET 1 AB3 4 ALA L 155 LEU L 156 0 SHEET 2 AB3 4 LYS L 147 VAL L 152 -1 N VAL L 152 O ALA L 155 SHEET 3 AB3 4 VAL L 193 THR L 199 -1 O GLU L 197 N GLN L 149 SHEET 4 AB3 4 VAL L 207 ASN L 212 -1 O VAL L 207 N VAL L 198 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.07 SSBOND 2 CYS H 101 CYS H 106 1555 1555 2.05 SSBOND 3 CYS H 150 CYS H 206 1555 1555 2.04 SSBOND 4 CYS H 226 CYS L 216 1555 1555 2.03 SSBOND 5 CYS L 23 CYS L 89 1555 1555 2.07 SSBOND 6 CYS L 136 CYS L 196 1555 1555 2.01 CISPEP 1 PHE H 156 PRO H 157 0 -4.77 CISPEP 2 GLU H 158 PRO H 159 0 -3.72 CISPEP 3 THR L 7 PRO L 8 0 -9.89 CISPEP 4 TYR L 142 PRO L 143 0 0.83 CRYST1 58.014 85.722 86.306 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017237 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011666 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011587 0.00000