HEADER NUCLEAR PROTEIN 28-SEP-20 7K95 TITLE CRYSTAL STRUCTURE OF HUMAN CPSF30 IN COMPLEX WITH HFIP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY COMPND 3 FACTOR SUBUNIT 4; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30 KDA COMPND 6 SUBUNIT,CPSF 30 KDA SUBUNIT,NS1 EFFECTOR DOMAIN-BINDING PROTEIN 1, COMPND 7 NEB-1,NO ARCHES HOMOLOG; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PRE-MRNA 3'-END-PROCESSING FACTOR FIP1; COMPND 11 CHAIN: B, C; COMPND 12 SYNONYM: HFIP1,FIP1-LIKE 1 PROTEIN,FACTOR INTERACTING WITH PAP, COMPND 13 REARRANGED IN HYPEREOSINOPHILIA; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CPSF4, CPSF30, NAR, NEB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: FIP1L1, FIP1, RHE; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MRNA PROCESSING, NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.HAMILTON,L.TONG REVDAT 3 06-MAR-24 7K95 1 REMARK REVDAT 2 16-DEC-20 7K95 1 JRNL REVDAT 1 11-NOV-20 7K95 0 JRNL AUTH K.HAMILTON,L.TONG JRNL TITL MOLECULAR MECHANISM FOR THE INTERACTION BETWEEN HUMAN CPSF30 JRNL TITL 2 AND HFIP1. JRNL REF GENES DEV. V. 34 1753 2020 JRNL REFN ISSN 0890-9369 JRNL PMID 33122294 JRNL DOI 10.1101/GAD.343814.120 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13086 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 690 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 943 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1043 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20000 REMARK 3 B22 (A**2) : 0.20000 REMARK 3 B33 (A**2) : -0.64000 REMARK 3 B12 (A**2) : 0.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.126 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.954 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1088 ; 0.015 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 954 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1463 ; 1.984 ; 1.678 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2212 ; 1.434 ; 1.606 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 120 ; 7.088 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;28.479 ;20.580 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 180 ;16.798 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;16.393 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 120 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1200 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 270 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 173 REMARK 3 ORIGIN FOR THE GROUP (A): 36.7565 7.6572 12.1428 REMARK 3 T TENSOR REMARK 3 T11: 0.1555 T22: 0.0179 REMARK 3 T33: 0.0779 T12: -0.0121 REMARK 3 T13: -0.0226 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.7241 L22: 3.5116 REMARK 3 L33: 4.5172 L12: 1.4769 REMARK 3 L13: 0.1777 L23: 1.6924 REMARK 3 S TENSOR REMARK 3 S11: -0.0181 S12: 0.1698 S13: -0.2827 REMARK 3 S21: 0.0297 S22: 0.1010 S23: 0.0304 REMARK 3 S31: 0.6291 S32: -0.1062 S33: -0.0828 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 162 B 200 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3696 16.0403 15.1300 REMARK 3 T TENSOR REMARK 3 T11: 0.1121 T22: 0.1581 REMARK 3 T33: 0.2081 T12: 0.0231 REMARK 3 T13: -0.0403 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 3.5673 L22: 4.4069 REMARK 3 L33: 3.8372 L12: 0.3616 REMARK 3 L13: -0.2507 L23: -0.8495 REMARK 3 S TENSOR REMARK 3 S11: -0.1276 S12: 0.0885 S13: 0.2834 REMARK 3 S21: 0.2117 S22: 0.2153 S23: 0.6958 REMARK 3 S31: 0.0100 S32: -0.7225 S33: -0.0877 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 161 C 191 REMARK 3 ORIGIN FOR THE GROUP (A): 52.9165 20.5377 9.0890 REMARK 3 T TENSOR REMARK 3 T11: 0.1859 T22: 0.3147 REMARK 3 T33: 0.1855 T12: -0.0231 REMARK 3 T13: 0.0221 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 4.5152 L22: 5.2834 REMARK 3 L33: 3.6529 L12: 0.7848 REMARK 3 L13: -0.6296 L23: -1.0370 REMARK 3 S TENSOR REMARK 3 S11: 0.0537 S12: 0.3410 S13: 0.1750 REMARK 3 S21: -0.3628 S22: -0.0170 S23: -0.8395 REMARK 3 S31: 0.0600 S32: 0.9281 S33: -0.0367 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7K95 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-20. REMARK 100 THE DEPOSITION ID IS D_1000251850. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20180808 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13793 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 0.87400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM MALONATE, 16% (W/V) PEG REMARK 280 3350, PH 5.7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.22067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.44133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 16.22067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.44133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 114 REMARK 465 ILE A 115 REMARK 465 ASP A 116 REMARK 465 PRO A 117 REMARK 465 GLU A 118 REMARK 465 SER A 119 REMARK 465 LYS A 120 REMARK 465 SER B 159 REMARK 465 PHE B 160 REMARK 465 GLU B 161 REMARK 465 SER C 159 REMARK 465 PHE C 160 REMARK 465 GLN C 192 REMARK 465 LYS C 193 REMARK 465 ARG C 194 REMARK 465 ILE C 195 REMARK 465 ARG C 196 REMARK 465 MET C 197 REMARK 465 GLY C 198 REMARK 465 LEU C 199 REMARK 465 GLU C 200 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 167 133.69 -26.85 REMARK 500 LYS C 167 138.89 -37.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 124 SG REMARK 620 2 CYS A 132 SG 112.4 REMARK 620 3 CYS A 138 SG 113.8 112.3 REMARK 620 4 HIS A 142 NE2 116.5 100.2 100.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 148 SG REMARK 620 2 CYS A 156 SG 109.9 REMARK 620 3 CYS A 162 SG 112.3 114.8 REMARK 620 4 HIS A 166 NE2 111.3 102.4 105.7 REMARK 620 N 1 2 3 DBREF1 7K95 A 114 173 UNP CPSF4-2_HUMAN DBREF2 7K95 A O95639-2 114 173 DBREF 7K95 B 159 200 UNP Q6UN15 FIP1_HUMAN 159 200 DBREF 7K95 C 159 200 UNP Q6UN15 FIP1_HUMAN 159 200 SEQRES 1 A 60 HIS ILE ASP PRO GLU SER LYS ILE LYS ASP CYS PRO TRP SEQRES 2 A 60 TYR ASP ARG GLY PHE CYS LYS HIS GLY PRO LEU CYS ARG SEQRES 3 A 60 HIS ARG HIS THR ARG ARG VAL ILE CYS VAL ASN TYR LEU SEQRES 4 A 60 VAL GLY PHE CYS PRO GLU GLY PRO SER CYS LYS PHE MET SEQRES 5 A 60 HIS PRO ARG PHE GLU LEU PRO MET SEQRES 1 B 42 SER PHE GLU ASP LYS PRO TRP ARG LYS PRO GLY ALA ASP SEQRES 2 B 42 LEU SER ASP TYR PHE ASN TYR GLY PHE ASN GLU ASP THR SEQRES 3 B 42 TRP LYS ALA TYR CYS GLU LYS GLN LYS ARG ILE ARG MET SEQRES 4 B 42 GLY LEU GLU SEQRES 1 C 42 SER PHE GLU ASP LYS PRO TRP ARG LYS PRO GLY ALA ASP SEQRES 2 C 42 LEU SER ASP TYR PHE ASN TYR GLY PHE ASN GLU ASP THR SEQRES 3 C 42 TRP LYS ALA TYR CYS GLU LYS GLN LYS ARG ILE ARG MET SEQRES 4 C 42 GLY LEU GLU HET ZN A 301 1 HET ZN A 302 1 HETNAM ZN ZINC ION FORMUL 4 ZN 2(ZN 2+) FORMUL 6 HOH *82(H2 O) HELIX 1 AA1 CYS A 124 GLY A 130 1 7 HELIX 2 AA2 HIS A 134 CYS A 138 5 5 HELIX 3 AA3 CYS A 148 GLY A 154 1 7 HELIX 4 AA4 GLU A 158 CYS A 162 5 5 HELIX 5 AA5 ASP B 171 TYR B 175 5 5 HELIX 6 AA6 ASN B 181 GLY B 198 1 18 HELIX 7 AA7 ASP C 171 TYR C 175 5 5 HELIX 8 AA8 ASN C 181 LYS C 191 1 11 LINK SG CYS A 124 ZN ZN A 301 1555 1555 2.28 LINK SG CYS A 132 ZN ZN A 301 1555 1555 2.15 LINK SG CYS A 138 ZN ZN A 301 1555 1555 2.34 LINK NE2 HIS A 142 ZN ZN A 301 1555 1555 2.05 LINK SG CYS A 148 ZN ZN A 302 1555 1555 2.35 LINK SG CYS A 156 ZN ZN A 302 1555 1555 2.22 LINK SG CYS A 162 ZN ZN A 302 1555 1555 2.33 LINK NE2 HIS A 166 ZN ZN A 302 1555 1555 2.10 CRYST1 79.040 79.040 48.662 90.00 90.00 120.00 P 64 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012652 0.007305 0.000000 0.00000 SCALE2 0.000000 0.014609 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020550 0.00000